Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
19:59:01 (2919374): wrapper (7.7.26015): starting
19:59:01 (2919374): wrapper: running run_atlas (--nthreads 4)
[2026-03-03 19:59:01] Arguments: --nthreads 4
[2026-03-03 19:59:01] Threads: 4
[2026-03-03 19:59:01] Checking for CVMFS
[2026-03-03 19:59:01] No cvmfs_config command found, will try listing directly
[2026-03-03 19:59:01] CVMFS is ok
[2026-03-03 19:59:01] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-03 19:59:01] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-03 19:59:01] Further information can be found at the LHC@home message board.
[2026-03-03 19:59:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-03 19:59:01] Checking for apptainer binary...
[2026-03-03 19:59:01] which: no apptainer in ((null))
[2026-03-03 19:59:01] apptainer is not installed, using version from CVMFS
[2026-03-03 19:59:01] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-03 19:59:01] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot36/slots/2/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut22.grid.cesnet.cz
[2026-03-03 19:59:01] apptainer works
[2026-03-03 19:59:01] Set ATHENA_PROC_NUMBER=4
[2026-03-03 19:59:01] Set ATHENA_CORE_NUMBER=4
[2026-03-03 19:59:01] Starting ATLAS job with PandaID=7032958741
[2026-03-03 19:59:01] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot36/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-03 21:42:37]  *** The last 200 lines of the pilot log: ***
[2026-03-03 21:42:37] 2026-03-03 20:41:28,953 | INFO     | extracted standard memory fields from prmon json
[2026-03-03 21:42:37] 2026-03-03 20:41:28,953 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-03 21:42:37] 2026-03-03 20:41:28,954 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-03 21:42:37] 2026-03-03 20:41:28,954 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-03 21:42:37] 2026-03-03 20:41:28,955 | INFO     | fitting pss+swap vs Time
[2026-03-03 21:42:37] 2026-03-03 20:41:28,955 | INFO     | sum of square deviations: 319447850.0
[2026-03-03 21:42:37] 2026-03-03 20:41:28,955 | INFO     | sum of deviations: 3426647550.000001
[2026-03-03 21:42:37] 2026-03-03 20:41:28,955 | INFO     | mean x: 1772567433.0
[2026-03-03 21:42:37] 2026-03-03 20:41:28,955 | INFO     | mean y: 2299309.2277227724
[2026-03-03 21:42:37] 2026-03-03 20:41:28,956 | INFO     | intersect: -19011645694.62577
[2026-03-03 21:42:37] 2026-03-03 20:41:28,956 | INFO     | chi2: 2.0957141211020316
[2026-03-03 21:42:37] 2026-03-03 20:41:28,956 | INFO     | sum of square deviations: 274312120.0
[2026-03-03 21:42:37] 2026-03-03 20:41:28,956 | INFO     | sum of deviations: 10067045391.0
[2026-03-03 21:42:37] 2026-03-03 20:41:28,956 | INFO     | mean x: 1772567280.5
[2026-03-03 21:42:37] 2026-03-03 20:41:28,956 | INFO     | mean y: 2320790.9375
[2026-03-03 21:42:37] 2026-03-03 20:41:28,956 | INFO     | intersect: -65049545205.34049
[2026-03-03 21:42:37] 2026-03-03 20:41:28,956 | INFO     | chi2: 1.0969328039007833
[2026-03-03 21:42:37] 2026-03-03 20:41:28,956 | INFO     | current chi2=1.0969328039007833 (change=47.658280637820916 %)
[2026-03-03 21:42:37] 2026-03-03 20:41:28,956 | INFO     | sum of square deviations: 233641590.0
[2026-03-03 21:42:37] 2026-03-03 20:41:28,957 | INFO     | sum of deviations: 9516122732.000002
[2026-03-03 21:42:37] 2026-03-03 20:41:28,957 | INFO     | mean x: 1772567128.0
[2026-03-03 21:42:37] 2026-03-03 20:41:28,957 | INFO     | mean y: 2318723.2527472526
[2026-03-03 21:42:37] 2026-03-03 20:41:28,957 | INFO     | intersect: -72193587582.45573
[2026-03-03 21:42:37] 2026-03-03 20:41:28,957 | INFO     | chi2: 1.0987481256582767
[2026-03-03 21:42:37] 2026-03-03 20:41:28,957 | INFO     | current chi2=1.0987481256582767 (change=-0.16549069833977106 %)
[2026-03-03 21:42:37] 2026-03-03 20:41:28,957 | INFO     | right removable region: 90
[2026-03-03 21:42:37] 2026-03-03 20:41:28,957 | INFO     | sum of square deviations: 274312120.0
[2026-03-03 21:42:37] 2026-03-03 20:41:28,957 | INFO     | sum of deviations: -6179229545.0
[2026-03-03 21:42:37] 2026-03-03 20:41:28,957 | INFO     | mean x: 1772567585.5
[2026-03-03 21:42:37] 2026-03-03 20:41:28,957 | INFO     | mean y: 2330732.4583333335
[2026-03-03 21:42:37] 2026-03-03 20:41:28,957 | INFO     | intersect: 39931671057.74515
[2026-03-03 21:42:37] 2026-03-03 20:41:28,958 | INFO     | chi2: 1.0413268851523603
[2026-03-03 21:42:37] 2026-03-03 20:41:28,958 | INFO     | current chi2=1.0413268851523603 (change=50.311596669264304 %)
[2026-03-03 21:42:37] 2026-03-03 20:41:28,958 | INFO     | sum of square deviations: 233641590.0
[2026-03-03 21:42:37] 2026-03-03 20:41:28,958 | INFO     | sum of deviations: -6180658409.0
[2026-03-03 21:42:37] 2026-03-03 20:41:28,958 | INFO     | mean x: 1772567738.0
[2026-03-03 21:42:37] 2026-03-03 20:41:28,958 | INFO     | mean y: 2330720.164835165
[2026-03-03 21:42:37] 2026-03-03 20:41:28,958 | INFO     | intersect: 46893107723.487785
[2026-03-03 21:42:37] 2026-03-03 20:41:28,958 | INFO     | chi2: 1.043133488671356
[2026-03-03 21:42:37] 2026-03-03 20:41:28,958 | INFO     | current chi2=1.043133488671356 (change=-0.17349052874317283 %)
[2026-03-03 21:42:37] 2026-03-03 20:41:28,958 | INFO     | left removable region: 20
[2026-03-03 21:42:37] 2026-03-03 20:41:28,958 | INFO     | sum of square deviations: 106336877.5
[2026-03-03 21:42:37] 2026-03-03 20:41:28,958 | INFO     | sum of deviations: 8270837.5
[2026-03-03 21:42:37] 2026-03-03 20:41:28,958 | INFO     | mean x: 1772567707.5
[2026-03-03 21:42:37] 2026-03-03 20:41:28,958 | INFO     | mean y: 2357703.0428571426
[2026-03-03 21:42:37] 2026-03-03 20:41:28,958 | INFO     | intersect: -135511865.9265724
[2026-03-03 21:42:37] 2026-03-03 20:41:28,958 | INFO     | chi2: 1.760006449313064e-06
[2026-03-03 21:42:37] 2026-03-03 20:41:28,959 | INFO     | current memory leak: 0.08 B/s (using 70 data points, chi2=0.00)
[2026-03-03 21:42:37] 2026-03-03 20:41:28,959 | INFO     | could have reported an average CPU frequency of 3572 MHz (7 samples)
[2026-03-03 21:42:37] 2026-03-03 20:41:28,959 | INFO     | ..............................
[2026-03-03 21:42:37] 2026-03-03 20:41:28,959 | INFO     | . Timing measurements:
[2026-03-03 21:42:37] 2026-03-03 20:41:28,959 | INFO     | . get job = 0 s
[2026-03-03 21:42:37] 2026-03-03 20:41:28,959 | INFO     | . initial setup = 7 s
[2026-03-03 21:42:37] 2026-03-03 20:41:28,959 | INFO     | . payload setup = 5 s
[2026-03-03 21:42:37] 2026-03-03 20:41:28,959 | INFO     | . stage-in = 0 s
[2026-03-03 21:42:37] 2026-03-03 20:41:28,959 | INFO     | . payload execution = 6105 s
[2026-03-03 21:42:37] 2026-03-03 20:41:28,959 | INFO     | . stage-out = 0 s
[2026-03-03 21:42:37] 2026-03-03 20:41:28,959 | INFO     | . log creation = 0 s
[2026-03-03 21:42:37] 2026-03-03 20:41:28,959 | INFO     | ..............................
[2026-03-03 21:42:37] 2026-03-03 20:41:29,077 | INFO     | 
[2026-03-03 21:42:37] 2026-03-03 20:41:29,077 | INFO     | job summary report
[2026-03-03 21:42:37] 2026-03-03 20:41:29,077 | INFO     | --------------------------------------------------
[2026-03-03 21:42:37] 2026-03-03 20:41:29,077 | INFO     | PanDA job id: 7032958741
[2026-03-03 21:42:37] 2026-03-03 20:41:29,077 | INFO     | task id: 48838476
[2026-03-03 21:42:37] 2026-03-03 20:41:29,077 | INFO     | errors: (none)
[2026-03-03 21:42:37] 2026-03-03 20:41:29,077 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-03 21:42:37] 2026-03-03 20:41:29,077 | INFO     | pilot state: finished 
[2026-03-03 21:42:37] 2026-03-03 20:41:29,077 | INFO     | transexitcode: 0
[2026-03-03 21:42:37] 2026-03-03 20:41:29,077 | INFO     | exeerrorcode: 0
[2026-03-03 21:42:37] 2026-03-03 20:41:29,077 | INFO     | exeerrordiag: 
[2026-03-03 21:42:37] 2026-03-03 20:41:29,077 | INFO     | exitcode: 0
[2026-03-03 21:42:37] 2026-03-03 20:41:29,077 | INFO     | exitmsg: OK
[2026-03-03 21:42:37] 2026-03-03 20:41:29,077 | INFO     | cpuconsumptiontime: 22923 s
[2026-03-03 21:42:37] 2026-03-03 20:41:29,077 | INFO     | nevents: 400
[2026-03-03 21:42:37] 2026-03-03 20:41:29,077 | INFO     | neventsw: 0
[2026-03-03 21:42:37] 2026-03-03 20:41:29,077 | INFO     | pid: 2929982
[2026-03-03 21:42:37] 2026-03-03 20:41:29,077 | INFO     | pgrp: 2929982
[2026-03-03 21:42:37] 2026-03-03 20:41:29,077 | INFO     | corecount: 4
[2026-03-03 21:42:37] 2026-03-03 20:41:29,077 | INFO     | event service: False
[2026-03-03 21:42:37] 2026-03-03 20:41:29,077 | INFO     | sizes: {0: 2286850, 1: 2287084, 11: 2287084, 6114: 2314159, 6115: 2323234, 6117: 2323372}
[2026-03-03 21:42:37] 2026-03-03 20:41:29,077 | INFO     | --------------------------------------------------
[2026-03-03 21:42:37] 2026-03-03 20:41:29,077 | INFO     | 
[2026-03-03 21:42:37] 2026-03-03 20:41:29,077 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot36/slots/2
[2026-03-03 21:42:37] 2026-03-03 20:41:29,112 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-03 21:42:37] 2026-03-03 20:41:29,112 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-03 21:42:37] 2026-03-03 20:41:29,113 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-03 21:42:37] 2026-03-03 20:41:29,113 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-03 21:42:37] 2026-03-03 20:41:29,113 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-03 21:42:37] 2026-03-03 20:41:29,113 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-03 21:42:37] 2026-03-03 20:41:29,113 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-03 21:42:37] 2026-03-03 20:41:29,113 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-03 21:42:37] 2026-03-03 20:41:29,113 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-03 21:42:37] 2026-03-03 20:41:29,113 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-03 21:42:37] 2026-03-03 20:41:29,113 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-03 21:42:37] 2026-03-03 20:41:29,113 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-03 21:42:37] 2026-03-03 20:41:29,113 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-03 21:42:37] 2026-03-03 20:41:29,113 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-03 21:42:37] 2026-03-03 20:41:29,113 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-03 21:42:37] 2026-03-03 20:41:29,113 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-03 21:42:37] 2026-03-03 20:41:29,113 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-03 21:42:37] 2026-03-03 20:41:29,113 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-03 21:42:37] 2026-03-03 20:41:29,113 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-03 21:42:37] 2026-03-03 20:41:29,113 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-03 21:42:37] 2026-03-03 20:41:29,113 | INFO     | job 7032958741 has completed (purged errors)
[2026-03-03 21:42:37] 2026-03-03 20:41:29,113 | INFO     | overall cleanup function is called
[2026-03-03 21:42:37] 2026-03-03 20:41:30,121 | INFO     | --- collectZombieJob: --- 10, [2929982]
[2026-03-03 21:42:37] 2026-03-03 20:41:30,121 | INFO     | zombie collector waiting for pid 2929982
[2026-03-03 21:42:37] 2026-03-03 20:41:30,121 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-03 21:42:37] 2026-03-03 20:41:30,121 | INFO     | collected zombie processes
[2026-03-03 21:42:37] 2026-03-03 20:41:30,121 | INFO     | will attempt to kill all subprocesses of pid=2929982
[2026-03-03 21:42:37] 2026-03-03 20:41:30,588 | INFO     | process IDs to be killed: [2929982] (in reverse order)
[2026-03-03 21:42:37] 2026-03-03 20:41:30,883 | WARNING  | found no corresponding commands to process id(s)
[2026-03-03 21:42:37] 2026-03-03 20:41:30,883 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-03 21:42:37] 2026-03-03 20:41:30,910 | INFO     | did not find any defunct processes belonging to 2929982
[2026-03-03 21:42:37] 2026-03-03 20:41:30,939 | INFO     | did not find any defunct processes belonging to 2929982
[2026-03-03 21:42:37] 2026-03-03 20:41:30,939 | INFO     | ready for new job
[2026-03-03 21:42:37] 2026-03-03 20:41:30,939 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-03 21:42:37] 2026-03-03 20:41:30,940 | INFO     | **************************************
[2026-03-03 21:42:37] 2026-03-03 20:41:30,940 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-03 21:42:37] 2026-03-03 20:41:30,941 | INFO     | **************************************
[2026-03-03 21:42:37] 2026-03-03 20:41:30,941 | INFO     | 
[2026-03-03 21:42:37] 2026-03-03 20:41:30,946 | INFO     | architecture information:
[2026-03-03 21:42:37] 2026-03-03 20:41:30,946 | INFO     | executing command: cat /etc/os-release
[2026-03-03 21:42:37] 2026-03-03 20:41:30,963 | INFO     | cat /etc/os-release:
[2026-03-03 21:42:37] NAME="CentOS Linux"
[2026-03-03 21:42:37] VERSION="7 (Core)"
[2026-03-03 21:42:37] ID="centos"
[2026-03-03 21:42:37] ID_LIKE="rhel fedora"
[2026-03-03 21:42:37] VERSION_ID="7"
[2026-03-03 21:42:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-03 21:42:37] ANSI_COLOR="0;31"
[2026-03-03 21:42:37] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-03 21:42:37] HOME_URL="https://www.centos.org/"
[2026-03-03 21:42:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-03 21:42:37] 
[2026-03-03 21:42:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-03 21:42:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-03 21:42:37] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-03 21:42:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-03 21:42:37] 
[2026-03-03 21:42:37] 2026-03-03 20:41:30,963 | INFO     | **************************************
[2026-03-03 21:42:37] 2026-03-03 20:41:31,472 | INFO     | executing command: df -mP /var/lib/boinc/var/slot36/slots/2
[2026-03-03 21:42:37] 2026-03-03 20:41:31,484 | INFO     | sufficient remaining disk space (24165482496 B)
[2026-03-03 21:42:37] 2026-03-03 20:41:31,484 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-03 21:42:37] 2026-03-03 20:41:31,484 | INFO     | current server update state: UPDATING_FINAL
[2026-03-03 21:42:37] 2026-03-03 20:41:31,484 | INFO     | update_server=False
[2026-03-03 21:42:37] 2026-03-03 20:41:31,484 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-03 21:42:37] 2026-03-03 20:41:31,484 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-03 21:42:37] 2026-03-03 20:41:31,765 | INFO     | all payload control threads have been joined
[2026-03-03 21:42:37] 2026-03-03 20:41:32,491 | INFO     | [job] retrieve thread has finished
[2026-03-03 21:42:37] 2026-03-03 20:41:32,552 | INFO     | all data control threads have been joined
[2026-03-03 21:42:37] 2026-03-03 20:41:32,688 | INFO     | [job] validate thread has finished
[2026-03-03 21:42:37] 2026-03-03 20:41:32,737 | INFO     | [payload] validate_post thread has finished
[2026-03-03 21:42:37] 2026-03-03 20:41:32,770 | INFO     | [payload] control thread has finished
[2026-03-03 21:42:37] 2026-03-03 20:41:32,944 | INFO     | [job] create_data_payload thread has finished
[2026-03-03 21:42:37] 2026-03-03 20:41:33,135 | INFO     | [payload] validate_pre thread has finished
[2026-03-03 21:42:37] 2026-03-03 20:41:33,166 | INFO     | all job control threads have been joined
[2026-03-03 21:42:37] 2026-03-03 20:41:33,290 | INFO     | [data] copytool_in thread has finished
[2026-03-03 21:42:37] 2026-03-03 20:41:33,429 | INFO     | [payload] execute_payloads thread has finished
[2026-03-03 21:42:37] 2026-03-03 20:41:33,488 | WARNING  | process 2929982 can no longer be monitored (due to stat problems) - aborting
[2026-03-03 21:42:37] 2026-03-03 20:41:33,492 | INFO     | [data] copytool_out thread has finished
[2026-03-03 21:42:37] 2026-03-03 20:41:33,559 | INFO     | [data] control thread has finished
[2026-03-03 21:42:37] 2026-03-03 20:41:33,644 | INFO     | [payload] failed_post thread has finished
[2026-03-03 21:42:37] 2026-03-03 20:41:33,720 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-03 21:42:37] 2026-03-03 20:41:33,812 | INFO     | using path: /var/lib/boinc/var/slot36/slots/2/memory_monitor_summary.json (trf name=prmon)
[2026-03-03 21:42:37] 2026-03-03 20:41:34,019 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-03 21:42:37] 2026-03-03 20:41:34,174 | INFO     | [job] control thread has finished
[2026-03-03 21:42:37] 2026-03-03 20:41:34,331 | INFO     | number of running child processes to parent process 2929982: 1
[2026-03-03 21:42:37] 2026-03-03 20:41:34,331 | INFO     | maximum number of monitored processes: 6
[2026-03-03 21:42:37] 2026-03-03 20:41:34,331 | INFO     | aborting job monitoring since job object (job id=7032958741) has expired
[2026-03-03 21:42:37] 2026-03-03 20:41:34,332 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-03 21:42:37] 2026-03-03 20:41:34,332 | INFO     | will abort loop
[2026-03-03 21:42:37] 2026-03-03 20:41:35,024 | INFO     | [job] queue monitor thread has finished
[2026-03-03 21:42:37] 2026-03-03 20:41:35,344 | INFO     | [job] job monitor thread has finished
[2026-03-03 21:42:37] 2026-03-03 20:41:37,733 | INFO     | [data] queue_monitor thread has finished
[2026-03-03 21:42:37] 2026-03-03 20:41:42,006 | INFO     | job.realtimelogging is not enabled
[2026-03-03 21:42:37] 2026-03-03 20:41:43,021 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-03 21:42:37] 2026-03-03 20:42:01,850 | INFO     | PID=2924043 has CPU usage=7.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-03 21:42:37] 2026-03-03 20:42:01,851 | INFO     | .. there are 57 such processes running
[2026-03-03 21:42:37] 2026-03-03 20:42:01,852 | INFO     | found 0 job(s) in 20 queues
[2026-03-03 21:42:37] 2026-03-03 20:42:01,852 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-03 21:42:37] 2026-03-03 20:42:01,852 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-03 21:42:37] 2026-03-03 20:42:31,182 | INFO     | [monitor] cgroup control has ended
[2026-03-03 21:42:37] 2026-03-03 20:42:32,442 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23451611293504)>', '<ExcThread(monitor, started 23451365799680)>']
[2026-03-03 21:42:37] 2026-03-03 20:42:33,039 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-03 21:42:37] 2026-03-03 20:42:33,039 | INFO     | [monitor] control thread has ended
[2026-03-03 21:42:37] 2026-03-03 20:42:37,468 | INFO     | all workflow threads have been joined
[2026-03-03 21:42:37] 2026-03-03 20:42:37,468 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-03 21:42:37] 2026-03-03 20:42:37,468 | INFO     | traces error code: 0
[2026-03-03 21:42:37] 2026-03-03 20:42:37,468 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-03 21:42:37] 2026-03-03 20:42:37,767 [wrapper] ==== pilot stdout END ====
[2026-03-03 21:42:37] 2026-03-03 20:42:37,770 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-03 21:42:37] 2026-03-03 20:42:37,772 [wrapper] pilotpid: 2924043
[2026-03-03 21:42:37] 2026-03-03 20:42:37,776 [wrapper] Pilot exit status: 0
[2026-03-03 21:42:37] 2026-03-03 20:42:37,800 [wrapper] pandaids: 7032958741
[2026-03-03 21:42:37] 2026-03-03 20:42:37,917 [wrapper] cleanup supervisor_pilot 3791827 2924044
[2026-03-03 21:42:37] 2026-03-03 20:42:37,924 [wrapper] Test setup, not cleaning
[2026-03-03 21:42:37] 2026-03-03 20:42:37,929 [wrapper] apfmon messages muted
[2026-03-03 21:42:37] 2026-03-03 20:42:37,931 [wrapper] ==== wrapper stdout END ====
[2026-03-03 21:42:37] 2026-03-03 20:42:37,933 [wrapper] ==== wrapper stderr END ====
[2026-03-03 21:42:37]  *** Error codes and diagnostics ***
[2026-03-03 21:42:38]     "exeErrorCode": 0,
[2026-03-03 21:42:38]     "exeErrorDiag": "",
[2026-03-03 21:42:38]     "pilotErrorCode": 0,
[2026-03-03 21:42:38]     "pilotErrorDiag": "",
[2026-03-03 21:42:38]  *** Listing of results directory ***
[2026-03-03 21:42:38] total 486664
[2026-03-03 21:42:38] -rw-r--r--. 1 boinc boinc    584627 Feb 28 11:26 pilot3.tar.gz
[2026-03-03 21:42:38] -rwx------. 1 boinc boinc     36322 Feb 28 11:29 runpilot2-wrapper.sh
[2026-03-03 21:42:38] -rw-r--r--. 1 boinc boinc      5111 Feb 28 11:31 queuedata.json
[2026-03-03 21:42:38] -rw-r--r--. 1 boinc boinc       100 Mar  3 19:58 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-03 21:42:38] -rwxr-xr-x. 1 boinc boinc      7986 Mar  3 19:58 run_atlas
[2026-03-03 21:42:38] -rw-r--r--. 1 boinc boinc       105 Mar  3 19:58 job.xml
[2026-03-03 21:42:38] -rw-r--r--. 1 boinc boinc      6701 Mar  3 19:59 init_data.xml
[2026-03-03 21:42:38] -rw-r--r--. 2 boinc boinc 282536518 Mar  3 19:59 EVNT.48220149._000040.pool.root.1
[2026-03-03 21:42:38] -rw-r--r--. 2 boinc boinc     15845 Mar  3 19:59 start_atlas.sh
[2026-03-03 21:42:38] drwxrwx--x. 2 boinc boinc      4096 Mar  3 19:59 shared
[2026-03-03 21:42:38] -rw-r--r--. 2 boinc boinc    597984 Mar  3 19:59 input.tar.gz
[2026-03-03 21:42:38] -rw-r--r--. 1 boinc boinc         0 Mar  3 19:59 boinc_lockfile
[2026-03-03 21:42:38] -rw-r--r--. 1 boinc boinc      2587 Mar  3 19:59 pandaJob.out
[2026-03-03 21:42:38] -rw-------. 1 boinc boinc    998492 Mar  3 19:59 agis_schedconf.cvmfs.json
[2026-03-03 21:42:38] -rw-------. 1 boinc boinc   1516092 Mar  3 19:59 agis_ddmendpoints.agis.ALL.json
[2026-03-03 21:42:38] -rw-------. 1 boinc boinc       444 Mar  3 19:59 workernode_map.json
[2026-03-03 21:42:38] drwx------. 5 boinc boinc      4096 Mar  3 19:59 pilot3
[2026-03-03 21:42:38] -rw-------. 1 boinc boinc 209514507 Mar  3 21:40 HITS.48838476._001016.pool.root.1
[2026-03-03 21:42:38] -rw-r--r--. 1 boinc boinc       529 Mar  3 21:41 boinc_task_state.xml
[2026-03-03 21:42:38] -rw-------. 1 boinc boinc      1032 Mar  3 21:41 memory_monitor_summary.json
[2026-03-03 21:42:38] -rw-------. 1 boinc boinc    296870 Mar  3 21:41 log.48838476._001016.job.log.tgz.1
[2026-03-03 21:42:38] -rw-------. 1 boinc boinc      6348 Mar  3 21:41 heartbeat.json
[2026-03-03 21:42:38] -rw-------. 1 boinc boinc        95 Mar  3 21:42 pilot_heartbeat.json
[2026-03-03 21:42:38] -rw-r--r--. 1 boinc boinc      8192 Mar  3 21:42 boinc_mmap_file
[2026-03-03 21:42:38] -rw-r--r--. 1 boinc boinc        27 Mar  3 21:42 wrapper_checkpoint.txt
[2026-03-03 21:42:38] -rw-------. 1 boinc boinc      5433 Mar  3 21:42 pilotlog.txt
[2026-03-03 21:42:38] -rw-------. 1 boinc boinc    879712 Mar  3 21:42 log.48838476._001016.job.log.1
[2026-03-03 21:42:38] -rw-------. 1 boinc boinc       357 Mar  3 21:42 output.list
[2026-03-03 21:42:38] -rw-r--r--. 1 boinc boinc       620 Mar  3 21:42 runtime_log
[2026-03-03 21:42:38] -rw-------. 1 boinc boinc   1198080 Mar  3 21:42 result.tar.gz
[2026-03-03 21:42:38] -rw-r--r--. 1 boinc boinc      9204 Mar  3 21:42 runtime_log.err
[2026-03-03 21:42:38] -rw-------. 1 boinc boinc       662 Mar  3 21:42 i0nNDmHlWG9n9Rq4apOajLDm4fhM0noT9bVooX4SDmVE5KDmznU86n.diag
[2026-03-03 21:42:38] -rw-r--r--. 1 boinc boinc     20821 Mar  3 21:42 stderr.txt
[2026-03-03 21:42:38] HITS file was successfully produced:
[2026-03-03 21:42:38] -rw-------. 1 boinc boinc 209514507 Mar  3 21:40 shared/HITS.pool.root.1
[2026-03-03 21:42:38]  *** Contents of shared directory: ***
[2026-03-03 21:42:38] total 482304
[2026-03-03 21:42:38] -rw-r--r--. 2 boinc boinc 282536518 Mar  3 19:59 ATLAS.root_0
[2026-03-03 21:42:38] -rw-r--r--. 2 boinc boinc     15845 Mar  3 19:59 start_atlas.sh
[2026-03-03 21:42:38] -rw-r--r--. 2 boinc boinc    597984 Mar  3 19:59 input.tar.gz
[2026-03-03 21:42:38] -rw-------. 1 boinc boinc 209514507 Mar  3 21:40 HITS.pool.root.1
[2026-03-03 21:42:38] -rw-------. 1 boinc boinc   1198080 Mar  3 21:42 result.tar.gz
21:42:39 (2919374): run_atlas exited; CPU time 23191.817517
21:42:39 (2919374): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN