Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
00:04:55 (1575154): wrapper (7.7.26015): starting
00:04:55 (1575154): wrapper: running run_atlas (--nthreads 4)
[2026-03-01 00:04:55] Arguments: --nthreads 4
[2026-03-01 00:04:55] Threads: 4
[2026-03-01 00:04:55] Checking for CVMFS
[2026-03-01 00:04:55] No cvmfs_config command found, will try listing directly
[2026-03-01 00:04:55] CVMFS is ok
[2026-03-01 00:04:55] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-01 00:04:55] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-01 00:04:55] Further information can be found at the LHC@home message board.
[2026-03-01 00:04:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-01 00:04:55] Checking for apptainer binary...
[2026-03-01 00:04:55] which: no apptainer in ((null))
[2026-03-01 00:04:55] apptainer is not installed, using version from CVMFS
[2026-03-01 00:04:55] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-01 00:04:55] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot88/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut11.grid.cesnet.cz
[2026-03-01 00:04:55] apptainer works
[2026-03-01 00:04:55] Set ATHENA_PROC_NUMBER=4
[2026-03-01 00:04:55] Set ATHENA_CORE_NUMBER=4
[2026-03-01 00:04:55] Starting ATLAS job with PandaID=7032466741
[2026-03-01 00:04:55] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot88/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-01 03:54:12]  *** The last 200 lines of the pilot log: ***
[2026-03-01 03:54:12] 2026-03-01 02:18:42,348 | INFO     | job 7032466741 has state=finished
[2026-03-01 03:54:12] 2026-03-01 02:18:42,348 | INFO     | preparing for final server update for job 7032466741 in state='finished'
[2026-03-01 03:54:12] 2026-03-01 02:18:42,349 | INFO     | reading metadata from: /scratch/boinc/var/slot88/slots/0/PanDA_Pilot-7032466741/jobReport.json
[2026-03-01 03:54:12] 2026-03-01 02:18:42,352 | INFO     | added worker_node to metadata from /scratch/boinc/var/slot88/slots/0/workernode_map.json
[2026-03-01 03:54:12] 2026-03-01 02:18:42,352 | INFO     | this job has now completed (state=finished)
[2026-03-01 03:54:12] 2026-03-01 02:18:42,352 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-01 03:54:12] 2026-03-01 02:18:42,353 | INFO     | log transfer has been attempted: DONE
[2026-03-01 03:54:12] 2026-03-01 02:18:42,353 | INFO     | job 7032466741 has finished - writing final server update
[2026-03-01 03:54:12] 2026-03-01 02:18:42,353 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_2636196/.job.ad'
[2026-03-01 03:54:12] 2026-03-01 02:18:42,353 | INFO     | total number of processed events: 400 (read)
[2026-03-01 03:54:12] 2026-03-01 02:18:42,376 | INFO     | using path: /scratch/boinc/var/slot88/slots/0/PanDA_Pilot-7032466741/memory_monitor_summary.json (trf name=prmon)
[2026-03-01 03:54:12] 2026-03-01 02:18:42,377 | INFO     | extracted standard info from prmon json
[2026-03-01 03:54:12] 2026-03-01 02:18:42,377 | INFO     | extracted standard memory fields from prmon json
[2026-03-01 03:54:12] 2026-03-01 02:18:42,377 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-01 03:54:12] 2026-03-01 02:18:42,377 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-01 03:54:12] 2026-03-01 02:18:42,377 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-01 03:54:12] 2026-03-01 02:18:42,381 | INFO     | fitting pss+swap vs Time
[2026-03-01 03:54:12] 2026-03-01 02:18:42,381 | INFO     | sum of square deviations: 2126802667.5
[2026-03-01 03:54:12] 2026-03-01 02:18:42,382 | INFO     | sum of deviations: 31179215693.5
[2026-03-01 03:54:12] 2026-03-01 02:18:42,382 | INFO     | mean x: 1772325716.5
[2026-03-01 03:54:12] 2026-03-01 02:18:42,383 | INFO     | mean y: 2327911.5736842104
[2026-03-01 03:54:12] 2026-03-01 02:18:42,383 | INFO     | intersect: -25980207580.939484
[2026-03-01 03:54:12] 2026-03-01 02:18:42,383 | INFO     | chi2: 1.2869704974182437
[2026-03-01 03:54:12] 2026-03-01 02:18:42,383 | INFO     | sum of square deviations: 1963274020.0
[2026-03-01 03:54:12] 2026-03-01 02:18:42,384 | INFO     | sum of deviations: 29611951630.000004
[2026-03-01 03:54:12] 2026-03-01 02:18:42,384 | INFO     | mean x: 1772325564.0
[2026-03-01 03:54:12] 2026-03-01 02:18:42,384 | INFO     | mean y: 2326460.4054054054
[2026-03-01 03:54:12] 2026-03-01 02:18:42,385 | INFO     | intersect: -26729560346.603058
[2026-03-01 03:54:12] 2026-03-01 02:18:42,385 | INFO     | chi2: 1.286518467683721
[2026-03-01 03:54:12] 2026-03-01 02:18:42,385 | INFO     | current chi2=1.286518467683721 (change=0.03512355065089257 %)
[2026-03-01 03:54:12] 2026-03-01 02:18:42,385 | INFO     | right removable region: 184
[2026-03-01 03:54:12] 2026-03-01 02:18:42,385 | INFO     | sum of square deviations: 1963274020.0
[2026-03-01 03:54:12] 2026-03-01 02:18:42,386 | INFO     | sum of deviations: 6130682817.0
[2026-03-01 03:54:12] 2026-03-01 02:18:42,386 | INFO     | mean x: 1772325869.0
[2026-03-01 03:54:12] 2026-03-01 02:18:42,386 | INFO     | mean y: 2350981.772972973
[2026-03-01 03:54:12] 2026-03-01 02:18:42,387 | INFO     | intersect: -5532061250.301943
[2026-03-01 03:54:12] 2026-03-01 02:18:42,387 | INFO     | chi2: 0.003236637866384246
[2026-03-01 03:54:12] 2026-03-01 02:18:42,387 | INFO     | current chi2=0.003236637866384246 (change=99.74850722119294 %)
[2026-03-01 03:54:12] 2026-03-01 02:18:42,387 | INFO     | sum of square deviations: 1808350185.0
[2026-03-01 03:54:12] 2026-03-01 02:18:42,388 | INFO     | sum of deviations: 5554026942.000002
[2026-03-01 03:54:12] 2026-03-01 02:18:42,388 | INFO     | mean x: 1772326021.5
[2026-03-01 03:54:12] 2026-03-01 02:18:42,388 | INFO     | mean y: 2351550.488888889
[2026-03-01 03:54:12] 2026-03-01 02:18:42,388 | INFO     | intersect: -5441033561.017418
[2026-03-01 03:54:12] 2026-03-01 02:18:42,389 | INFO     | chi2: 0.002835455404721311
[2026-03-01 03:54:12] 2026-03-01 02:18:42,389 | INFO     | current chi2=0.002835455404721311 (change=12.395037017567532 %)
[2026-03-01 03:54:12] 2026-03-01 02:18:42,389 | INFO     | left removable region: 20
[2026-03-01 03:54:12] 2026-03-01 02:18:42,389 | INFO     | sum of square deviations: 1367709365.0
[2026-03-01 03:54:12] 2026-03-01 02:18:42,390 | INFO     | sum of deviations: 2771296703.5
[2026-03-01 03:54:12] 2026-03-01 02:18:42,390 | INFO     | mean x: 1772326143.5
[2026-03-01 03:54:12] 2026-03-01 02:18:42,390 | INFO     | mean y: 2352773.176829268
[2026-03-01 03:54:12] 2026-03-01 02:18:42,390 | INFO     | intersect: -3588791460.1657696
[2026-03-01 03:54:12] 2026-03-01 02:18:42,390 | INFO     | chi2: 0.00030742862926498804
[2026-03-01 03:54:12] 2026-03-01 02:18:42,391 | INFO     | current memory leak: 2.03 B/s (using 164 data points, chi2=0.00)
[2026-03-01 03:54:12] 2026-03-01 02:18:42,391 | INFO     | could have reported an average CPU frequency of 2727 MHz (10 samples)
[2026-03-01 03:54:12] 2026-03-01 02:18:42,391 | INFO     | ..............................
[2026-03-01 03:54:12] 2026-03-01 02:18:42,391 | INFO     | . Timing measurements:
[2026-03-01 03:54:12] 2026-03-01 02:18:42,391 | INFO     | . get job = 0 s
[2026-03-01 03:54:12] 2026-03-01 02:18:42,391 | INFO     | . initial setup = 9 s
[2026-03-01 03:54:12] 2026-03-01 02:18:42,391 | INFO     | . payload setup = 10 s
[2026-03-01 03:54:12] 2026-03-01 02:18:42,391 | INFO     | . stage-in = 0 s
[2026-03-01 03:54:12] 2026-03-01 02:18:42,392 | INFO     | . payload execution = 11572 s
[2026-03-01 03:54:12] 2026-03-01 02:18:42,392 | INFO     | . stage-out = 1 s
[2026-03-01 03:54:12] 2026-03-01 02:18:42,392 | INFO     | . log creation = 0 s
[2026-03-01 03:54:12] 2026-03-01 02:18:42,392 | INFO     | ..............................
[2026-03-01 03:54:12] 2026-03-01 02:18:42,834 | INFO     | 
[2026-03-01 03:54:12] 2026-03-01 02:18:42,834 | INFO     | job summary report
[2026-03-01 03:54:12] 2026-03-01 02:18:42,834 | INFO     | --------------------------------------------------
[2026-03-01 03:54:12] 2026-03-01 02:18:42,834 | INFO     | PanDA job id: 7032466741
[2026-03-01 03:54:12] 2026-03-01 02:18:42,835 | INFO     | task id: 48838416
[2026-03-01 03:54:12] 2026-03-01 02:18:42,835 | INFO     | errors: (none)
[2026-03-01 03:54:12] 2026-03-01 02:18:42,835 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-01 03:54:12] 2026-03-01 02:18:42,835 | INFO     | pilot state: finished 
[2026-03-01 03:54:12] 2026-03-01 02:18:42,835 | INFO     | transexitcode: 0
[2026-03-01 03:54:12] 2026-03-01 02:18:42,835 | INFO     | exeerrorcode: 0
[2026-03-01 03:54:12] 2026-03-01 02:18:42,835 | INFO     | exeerrordiag: 
[2026-03-01 03:54:12] 2026-03-01 02:18:42,835 | INFO     | exitcode: 0
[2026-03-01 03:54:12] 2026-03-01 02:18:42,835 | INFO     | exitmsg: OK
[2026-03-01 03:54:12] 2026-03-01 02:18:42,835 | INFO     | cpuconsumptiontime: 44657 s
[2026-03-01 03:54:12] 2026-03-01 02:18:42,835 | INFO     | nevents: 400
[2026-03-01 03:54:12] 2026-03-01 02:18:42,836 | INFO     | neventsw: 0
[2026-03-01 03:54:12] 2026-03-01 02:18:42,836 | INFO     | pid: 1603383
[2026-03-01 03:54:12] 2026-03-01 02:18:42,836 | INFO     | pgrp: 1603383
[2026-03-01 03:54:12] 2026-03-01 02:18:42,836 | INFO     | corecount: 4
[2026-03-01 03:54:12] 2026-03-01 02:18:42,836 | INFO     | event service: False
[2026-03-01 03:54:12] 2026-03-01 02:18:42,836 | INFO     | sizes: {0: 2281857, 1: 2282318, 12: 2282318, 11586: 2312210, 11587: 2321230, 11588: 2321286, 11589: 2321608}
[2026-03-01 03:54:12] 2026-03-01 02:18:42,836 | INFO     | --------------------------------------------------
[2026-03-01 03:54:12] 2026-03-01 02:18:42,836 | INFO     | 
[2026-03-01 03:54:12] 2026-03-01 02:18:42,836 | INFO     | executing command: ls -lF /scratch/boinc/var/slot88/slots/0
[2026-03-01 03:54:12] 2026-03-01 02:18:42,869 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-01 03:54:12] 2026-03-01 02:18:42,870 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-01 03:54:12] 2026-03-01 02:18:42,870 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-01 03:54:12] 2026-03-01 02:18:42,870 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-01 03:54:12] 2026-03-01 02:18:42,870 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-01 03:54:12] 2026-03-01 02:18:42,870 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-01 03:54:12] 2026-03-01 02:18:42,870 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-01 03:54:12] 2026-03-01 02:18:42,870 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-01 03:54:12] 2026-03-01 02:18:42,870 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-01 03:54:12] 2026-03-01 02:18:42,870 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-01 03:54:12] 2026-03-01 02:18:42,870 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-01 03:54:12] 2026-03-01 02:18:42,871 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-01 03:54:12] 2026-03-01 02:18:42,871 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-01 03:54:12] 2026-03-01 02:18:42,871 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-01 03:54:12] 2026-03-01 02:18:42,871 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-01 03:54:12] 2026-03-01 02:18:42,871 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-01 03:54:12] 2026-03-01 02:18:42,871 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-01 03:54:12] 2026-03-01 02:18:42,871 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-01 03:54:12] 2026-03-01 02:18:42,871 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-01 03:54:12] 2026-03-01 02:18:42,871 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-01 03:54:12] 2026-03-01 02:18:42,872 | INFO     | job 7032466741 has completed (purged errors)
[2026-03-01 03:54:12] 2026-03-01 02:18:42,872 | INFO     | overall cleanup function is called
[2026-03-01 03:54:12] 2026-03-01 02:18:43,881 | INFO     | --- collectZombieJob: --- 10, [1603383]
[2026-03-01 03:54:12] 2026-03-01 02:18:43,882 | INFO     | zombie collector waiting for pid 1603383
[2026-03-01 03:54:12] 2026-03-01 02:18:43,882 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-01 03:54:12] 2026-03-01 02:18:43,882 | INFO     | collected zombie processes
[2026-03-01 03:54:12] 2026-03-01 02:18:43,882 | INFO     | will attempt to kill all subprocesses of pid=1603383
[2026-03-01 03:54:12] 2026-03-01 02:18:44,732 | INFO     | process IDs to be killed: [1603383] (in reverse order)
[2026-03-01 03:54:12] 2026-03-01 02:18:45,038 | WARNING  | found no corresponding commands to process id(s)
[2026-03-01 03:54:12] 2026-03-01 02:18:45,039 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-01 03:54:12] 2026-03-01 02:18:45,071 | INFO     | did not find any defunct processes belonging to 1603383
[2026-03-01 03:54:12] 2026-03-01 02:18:45,102 | INFO     | did not find any defunct processes belonging to 1603383
[2026-03-01 03:54:12] 2026-03-01 02:18:45,102 | INFO     | ready for new job
[2026-03-01 03:54:12] 2026-03-01 02:18:45,102 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-01 03:54:12] 2026-03-01 02:18:45,105 | INFO     | **************************************
[2026-03-01 03:54:12] 2026-03-01 02:18:45,105 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-01 03:54:12] 2026-03-01 02:18:45,105 | INFO     | **************************************
[2026-03-01 03:54:12] 2026-03-01 02:18:45,105 | INFO     | 
[2026-03-01 03:54:12] 2026-03-01 02:18:45,114 | INFO     | architecture information:
[2026-03-01 03:54:12] 2026-03-01 02:18:45,114 | INFO     | executing command: cat /etc/os-release
[2026-03-01 03:54:12] 2026-03-01 02:18:45,154 | INFO     | cat /etc/os-release:
[2026-03-01 03:54:12] NAME="CentOS Linux"
[2026-03-01 03:54:12] VERSION="7 (Core)"
[2026-03-01 03:54:12] ID="centos"
[2026-03-01 03:54:12] ID_LIKE="rhel fedora"
[2026-03-01 03:54:12] VERSION_ID="7"
[2026-03-01 03:54:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-01 03:54:12] ANSI_COLOR="0;31"
[2026-03-01 03:54:12] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-01 03:54:12] HOME_URL="https://www.centos.org/"
[2026-03-01 03:54:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-01 03:54:12] 
[2026-03-01 03:54:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-01 03:54:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-01 03:54:12] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-01 03:54:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-01 03:54:12] 
[2026-03-01 03:54:12] 2026-03-01 02:18:45,155 | INFO     | **************************************
[2026-03-01 03:54:12] 2026-03-01 02:18:45,658 | INFO     | executing command: df -mP /scratch/boinc/var/slot88/slots/0
[2026-03-01 03:54:12] 2026-03-01 02:18:45,686 | INFO     | sufficient remaining disk space (3302911639552 B)
[2026-03-01 03:54:12] 2026-03-01 02:18:45,686 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-01 03:54:12] 2026-03-01 02:18:45,687 | INFO     | current server update state: UPDATING_FINAL
[2026-03-01 03:54:12] 2026-03-01 02:18:45,687 | INFO     | update_server=False
[2026-03-01 03:54:12] 2026-03-01 02:18:45,687 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-01 03:54:12] 2026-03-01 02:18:45,687 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-01 03:54:12] 2026-03-01 02:18:45,688 | INFO     | aborting loop
[2026-03-01 03:54:12] 2026-03-01 02:18:45,960 | INFO     | all payload control threads have been joined
[2026-03-01 03:54:12] 2026-03-01 02:18:46,295 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-01 03:54:12] 2026-03-01 02:18:46,411 | INFO     | all data control threads have been joined
[2026-03-01 03:54:12] 2026-03-01 02:18:46,461 | INFO     | all job control threads have been joined
[2026-03-01 03:54:12] 2026-03-01 02:18:46,689 | INFO     | [job] job monitor thread has finished
[2026-03-01 03:54:12] 2026-03-01 02:18:46,692 | INFO     | [job] retrieve thread has finished
[2026-03-01 03:54:12] 2026-03-01 02:18:46,809 | INFO     | [job] create_data_payload thread has finished
[2026-03-01 03:54:12] 2026-03-01 02:18:46,965 | INFO     | [payload] control thread has finished
[2026-03-01 03:54:12] 2026-03-01 02:18:47,183 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-01 03:54:12] 2026-03-01 02:18:47,253 | INFO     | [payload] validate_pre thread has finished
[2026-03-01 03:54:12] 2026-03-01 02:18:47,416 | INFO     | [data] control thread has finished
[2026-03-01 03:54:12] 2026-03-01 02:18:47,466 | INFO     | [job] control thread has finished
[2026-03-01 03:54:12] 2026-03-01 02:18:47,485 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-01 03:54:12] 2026-03-01 02:18:47,515 | INFO     | [data] copytool_in thread has finished
[2026-03-01 03:54:12] 2026-03-01 02:18:47,517 | INFO     | [payload] execute_payloads thread has finished
[2026-03-01 03:54:12] 2026-03-01 02:18:47,748 | INFO     | [job] validate thread has finished
[2026-03-01 03:54:12] 2026-03-01 02:18:47,917 | INFO     | [payload] failed_post thread has finished
[2026-03-01 03:54:12] 2026-03-01 02:18:48,096 | INFO     | [payload] validate_post thread has finished
[2026-03-01 03:54:12] 2026-03-01 02:18:48,301 | INFO     | [data] copytool_out thread has finished
[2026-03-01 03:54:12] 2026-03-01 02:18:48,490 | INFO     | [job] queue monitor thread has finished
[2026-03-01 03:54:12] 2026-03-01 02:18:51,189 | INFO     | [data] queue_monitor thread has finished
[2026-03-01 03:54:12] 2026-03-01 02:18:55,976 | INFO     | job.realtimelogging is not enabled
[2026-03-01 03:54:12] 2026-03-01 02:18:56,982 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-01 03:54:12] 2026-03-01 02:19:16,062 | INFO     | PID=1587299 has CPU usage=10.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-03-01 03:54:12] 2026-03-01 02:19:16,062 | INFO     | .. there are 9 such processes running
[2026-03-01 03:54:12] 2026-03-01 02:19:16,062 | INFO     | found 0 job(s) in 20 queues
[2026-03-01 03:54:12] 2026-03-01 02:19:16,063 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-01 03:54:12] 2026-03-01 02:19:16,063 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-01 03:54:12] 2026-03-01 02:19:40,419 | INFO     | [monitor] cgroup control has ended
[2026-03-01 03:54:12] 2026-03-01 02:19:41,899 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23131033741120)>', '<ExcThread(monitor, started 23130780452608)>']
[2026-03-01 03:54:12] 2026-03-01 02:19:42,174 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-01 03:54:12] 2026-03-01 02:19:42,175 | INFO     | [monitor] control thread has ended
[2026-03-01 03:54:12] 2026-03-01 02:19:46,927 | INFO     | all workflow threads have been joined
[2026-03-01 03:54:12] 2026-03-01 02:19:46,931 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-01 03:54:12] 2026-03-01 02:19:46,931 | INFO     | traces error code: 0
[2026-03-01 03:54:12] 2026-03-01 02:19:46,931 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-01 03:54:12] 2026-03-01 02:19:47,119 [wrapper] ==== pilot stdout END ====
[2026-03-01 03:54:12] 2026-03-01 02:19:47,123 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-01 03:54:12] 2026-03-01 02:19:47,127 [wrapper] pilotpid: 1587299
[2026-03-01 03:54:12] 2026-03-01 02:19:47,131 [wrapper] Pilot exit status: 0
[2026-03-01 03:54:12] 2026-03-01 02:19:47,149 [wrapper] pandaids: 7032466741
[2026-03-01 03:54:12] 2026-03-01 02:19:47,367 [wrapper] cleanup supervisor_pilot 1799434 1587300
[2026-03-01 03:54:12] 2026-03-01 02:19:47,371 [wrapper] Test setup, not cleaning
[2026-03-01 03:54:12] 2026-03-01 02:19:47,375 [wrapper] apfmon messages muted
[2026-03-01 03:54:12] 2026-03-01 02:19:47,379 [wrapper] ==== wrapper stdout END ====
[2026-03-01 03:54:12] 2026-03-01 02:19:47,382 [wrapper] ==== wrapper stderr END ====
[2026-03-01 03:54:12]  *** Error codes and diagnostics ***
[2026-03-01 03:54:12]     "exeErrorCode": 0,
[2026-03-01 03:54:12]     "exeErrorDiag": "",
[2026-03-01 03:54:12]     "pilotErrorCode": 0,
[2026-03-01 03:54:12]     "pilotErrorDiag": "",
[2026-03-01 03:54:12]  *** Listing of results directory ***
[2026-03-01 03:54:12] total 507008
[2026-03-01 03:54:12] -rw-r--r-- 1 boinc boinc    584627 Feb 28 05:15 pilot3.tar.gz
[2026-03-01 03:54:12] -rwx------ 1 boinc boinc     36322 Feb 28 05:16 runpilot2-wrapper.sh
[2026-03-01 03:54:12] -rw-r--r-- 1 boinc boinc      5111 Feb 28 05:16 queuedata.json
[2026-03-01 03:54:12] -rw-r--r-- 1 boinc boinc       100 Mar  1 00:04 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-01 03:54:12] -rwxr-xr-x 1 boinc boinc      7986 Mar  1 00:04 run_atlas
[2026-03-01 03:54:12] -rw-r--r-- 1 boinc boinc       105 Mar  1 00:04 job.xml
[2026-03-01 03:54:12] -rw-r--r-- 1 boinc boinc      6698 Mar  1 00:04 init_data.xml
[2026-03-01 03:54:12] -rw-r--r-- 2 boinc boinc 288181991 Mar  1 00:04 EVNT.48220085._000340.pool.root.1
[2026-03-01 03:54:12] -rw-r--r-- 2 boinc boinc     15845 Mar  1 00:04 start_atlas.sh
[2026-03-01 03:54:12] drwxrwx--x 2 boinc boinc      4096 Mar  1 00:04 shared
[2026-03-01 03:54:12] -rw-r--r-- 2 boinc boinc    597965 Mar  1 00:04 input.tar.gz
[2026-03-01 03:54:12] -rw-r--r-- 1 boinc boinc         0 Mar  1 00:04 boinc_lockfile
[2026-03-01 03:54:12] -rw-r--r-- 1 boinc boinc      2567 Mar  1 00:04 pandaJob.out
[2026-03-01 03:54:12] -rw------- 1 boinc boinc    998790 Mar  1 00:05 agis_schedconf.cvmfs.json
[2026-03-01 03:54:12] -rw------- 1 boinc boinc       440 Mar  1 00:05 workernode_map.json
[2026-03-01 03:54:12] drwx------ 5 boinc boinc      4096 Mar  1 00:05 pilot3
[2026-03-01 03:54:12] -rw------- 1 boinc boinc 223132209 Mar  1 03:17 HITS.48838416._008469.pool.root.1
[2026-03-01 03:54:12] -rw-r--r-- 1 boinc boinc       529 Mar  1 03:18 boinc_task_state.xml
[2026-03-01 03:54:12] -rw------- 1 boinc boinc        95 Mar  1 03:18 pilot_heartbeat.json
[2026-03-01 03:54:12] -rw------- 1 boinc boinc      1026 Mar  1 03:18 memory_monitor_summary.json
[2026-03-01 03:54:12] -rw------- 1 boinc boinc   1513015 Mar  1 03:18 agis_ddmendpoints.agis.ALL.json
[2026-03-01 03:54:12] -rw------- 1 boinc boinc    371842 Mar  1 03:18 log.48838416._008469.job.log.tgz.1
[2026-03-01 03:54:12] -rw------- 1 boinc boinc      6360 Mar  1 03:18 heartbeat.json
[2026-03-01 03:54:12] -rw------- 1 boinc boinc      4903 Mar  1 03:19 pilotlog.txt
[2026-03-01 03:54:12] -rw------- 1 boinc boinc   1593465 Mar  1 03:19 log.48838416._008469.job.log.1
[2026-03-01 03:54:12] -rw------- 1 boinc boinc       357 Mar  1 03:19 output.list
[2026-03-01 03:54:12] -rw-r--r-- 1 boinc boinc       620 Mar  1 03:19 runtime_log
[2026-03-01 03:54:12] -rw------- 1 boinc boinc   1986560 Mar  1 03:19 result.tar.gz
[2026-03-01 03:54:12] -rw-r--r-- 1 boinc boinc      9205 Mar  1 03:19 runtime_log.err
[2026-03-01 03:54:12] -rw------- 1 boinc boinc       667 Mar  1 03:19 WB0NDm1vQG9n9Rq4apOajLDm4fhM0noT9bVooX4SDmbZ4KDmW1riNn.diag
[2026-03-01 03:54:12] -rw-r--r-- 1 boinc boinc        26 Mar  1 03:53 wrapper_checkpoint.txt
[2026-03-01 03:54:12] -rw-r--r-- 1 boinc boinc      8192 Mar  1 03:54 boinc_mmap_file
[2026-03-01 03:54:12] -rw-r--r-- 1 boinc boinc     21111 Mar  1 03:54 stderr.txt
[2026-03-01 03:54:12] HITS file was successfully produced:
[2026-03-01 03:54:12] -rw------- 1 boinc boinc 223132209 Mar  1 03:17 shared/HITS.pool.root.1
[2026-03-01 03:54:12]  *** Contents of shared directory: ***
[2026-03-01 03:54:12] total 501880
[2026-03-01 03:54:12] -rw-r--r-- 2 boinc boinc 288181991 Mar  1 00:04 ATLAS.root_0
[2026-03-01 03:54:12] -rw-r--r-- 2 boinc boinc     15845 Mar  1 00:04 start_atlas.sh
[2026-03-01 03:54:12] -rw-r--r-- 2 boinc boinc    597965 Mar  1 00:04 input.tar.gz
[2026-03-01 03:54:12] -rw------- 1 boinc boinc 223132209 Mar  1 03:17 HITS.pool.root.1
[2026-03-01 03:54:12] -rw------- 1 boinc boinc   1986560 Mar  1 03:19 result.tar.gz
03:54:13 (1575154): run_atlas exited; CPU time 45489.651473
03:54:13 (1575154): called boinc_finish(0)

</stderr_txt>
]]>

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