Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:47:44 (1579662): wrapper (7.7.26015): starting
05:47:44 (1579662): wrapper: running run_atlas (--nthreads 4)
[2026-03-03 05:47:44] Arguments: --nthreads 4
[2026-03-03 05:47:44] Threads: 4
[2026-03-03 05:47:44] Checking for CVMFS
[2026-03-03 05:47:44] No cvmfs_config command found, will try listing directly
[2026-03-03 05:47:44] CVMFS is ok
[2026-03-03 05:47:44] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-03 05:47:44] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-03 05:47:44] Further information can be found at the LHC@home message board.
[2026-03-03 05:47:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-03 05:47:44] Checking for apptainer binary...
[2026-03-03 05:47:44] which: no apptainer in ((null))
[2026-03-03 05:47:44] apptainer is not installed, using version from CVMFS
[2026-03-03 05:47:44] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-03 05:47:44] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot60/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut11.grid.cesnet.cz
[2026-03-03 05:47:44] apptainer works
[2026-03-03 05:47:44] Set ATHENA_PROC_NUMBER=4
[2026-03-03 05:47:44] Set ATHENA_CORE_NUMBER=4
[2026-03-03 05:47:44] Starting ATLAS job with PandaID=7032912651
[2026-03-03 05:47:44] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot60/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-03 09:42:58]  *** The last 200 lines of the pilot log: ***
[2026-03-03 09:42:58] 2026-03-03 08:01:31,884 | INFO     | job 7032912651 has state=finished
[2026-03-03 09:42:58] 2026-03-03 08:01:31,884 | INFO     | preparing for final server update for job 7032912651 in state='finished'
[2026-03-03 09:42:58] 2026-03-03 08:01:31,884 | INFO     | reading metadata from: /scratch/boinc/var/slot60/slots/0/PanDA_Pilot-7032912651/jobReport.json
[2026-03-03 09:42:58] 2026-03-03 08:01:31,887 | INFO     | added worker_node to metadata from /scratch/boinc/var/slot60/slots/0/workernode_map.json
[2026-03-03 09:42:58] 2026-03-03 08:01:31,887 | INFO     | this job has now completed (state=finished)
[2026-03-03 09:42:58] 2026-03-03 08:01:31,887 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-03 09:42:58] 2026-03-03 08:01:31,887 | INFO     | log transfer has been attempted: DONE
[2026-03-03 09:42:58] 2026-03-03 08:01:31,887 | INFO     | job 7032912651 has finished - writing final server update
[2026-03-03 09:42:58] 2026-03-03 08:01:31,888 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_609392/.job.ad'
[2026-03-03 09:42:58] 2026-03-03 08:01:31,888 | INFO     | total number of processed events: 400 (read)
[2026-03-03 09:42:58] 2026-03-03 08:01:31,913 | INFO     | using path: /scratch/boinc/var/slot60/slots/0/PanDA_Pilot-7032912651/memory_monitor_summary.json (trf name=prmon)
[2026-03-03 09:42:58] 2026-03-03 08:01:31,914 | INFO     | extracted standard info from prmon json
[2026-03-03 09:42:58] 2026-03-03 08:01:31,915 | INFO     | extracted standard memory fields from prmon json
[2026-03-03 09:42:58] 2026-03-03 08:01:31,915 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-03 09:42:58] 2026-03-03 08:01:31,915 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-03 09:42:58] 2026-03-03 08:01:31,915 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-03 09:42:58] 2026-03-03 08:01:31,919 | INFO     | fitting pss+swap vs Time
[2026-03-03 09:42:58] 2026-03-03 08:01:31,920 | INFO     | sum of square deviations: 2126802667.5
[2026-03-03 09:42:58] 2026-03-03 08:01:31,921 | INFO     | sum of deviations: 23593598513.499996
[2026-03-03 09:42:58] 2026-03-03 08:01:31,921 | INFO     | mean x: 1772519076.5
[2026-03-03 09:42:58] 2026-03-03 08:01:31,921 | INFO     | mean y: 2330925.2157894736
[2026-03-03 09:42:58] 2026-03-03 08:01:31,921 | INFO     | intersect: -19661037043.76424
[2026-03-03 09:42:58] 2026-03-03 08:01:31,922 | INFO     | chi2: 1.343299676576368
[2026-03-03 09:42:58] 2026-03-03 08:01:31,922 | INFO     | sum of square deviations: 1963274020.0
[2026-03-03 09:42:58] 2026-03-03 08:01:31,923 | INFO     | sum of deviations: 22959431991.0
[2026-03-03 09:42:58] 2026-03-03 08:01:31,923 | INFO     | mean x: 1772518924.0
[2026-03-03 09:42:58] 2026-03-03 08:01:31,923 | INFO     | mean y: 2330333.6756756757
[2026-03-03 09:42:58] 2026-03-03 08:01:31,924 | INFO     | intersect: -20726323574.93078
[2026-03-03 09:42:58] 2026-03-03 08:01:31,924 | INFO     | chi2: 1.344091955982155
[2026-03-03 09:42:58] 2026-03-03 08:01:31,924 | INFO     | current chi2=1.344091955982155 (change=-0.058980093541458806 %)
[2026-03-03 09:42:58] 2026-03-03 08:01:31,924 | INFO     | right removable region: 184
[2026-03-03 09:42:58] 2026-03-03 08:01:31,924 | INFO     | sum of square deviations: 1963274020.0
[2026-03-03 09:42:58] 2026-03-03 08:01:31,925 | INFO     | sum of deviations: -1113272875.0000002
[2026-03-03 09:42:58] 2026-03-03 08:01:31,926 | INFO     | mean x: 1772519229.0
[2026-03-03 09:42:58] 2026-03-03 08:01:31,926 | INFO     | mean y: 2353660.054054054
[2026-03-03 09:42:58] 2026-03-03 08:01:31,926 | INFO     | intersect: 1007459191.915375
[2026-03-03 09:42:58] 2026-03-03 08:01:31,926 | INFO     | chi2: 0.00204451219712789
[2026-03-03 09:42:58] 2026-03-03 08:01:31,926 | INFO     | current chi2=0.00204451219712789 (change=99.8477992489108 %)
[2026-03-03 09:42:58] 2026-03-03 08:01:31,926 | INFO     | sum of square deviations: 1808350185.0
[2026-03-03 09:42:58] 2026-03-03 08:01:31,928 | INFO     | sum of deviations: -1048054663.9999996
[2026-03-03 09:42:58] 2026-03-03 08:01:31,928 | INFO     | mean x: 1772519381.5
[2026-03-03 09:42:58] 2026-03-03 08:01:31,928 | INFO     | mean y: 2353590.1555555556
[2026-03-03 09:42:58] 2026-03-03 08:01:31,928 | INFO     | intersect: 1029642010.4077811
[2026-03-03 09:42:58] 2026-03-03 08:01:31,928 | INFO     | chi2: 0.0018454356693144178
[2026-03-03 09:42:58] 2026-03-03 08:01:31,928 | INFO     | current chi2=0.0018454356693144178 (change=9.73711617339006 %)
[2026-03-03 09:42:58] 2026-03-03 08:01:31,929 | INFO     | left removable region: 20
[2026-03-03 09:42:58] 2026-03-03 08:01:31,929 | INFO     | sum of square deviations: 1367709365.0
[2026-03-03 09:42:58] 2026-03-03 08:01:31,930 | INFO     | sum of deviations: 435458443.0
[2026-03-03 09:42:58] 2026-03-03 08:01:31,930 | INFO     | mean x: 1772519503.5
[2026-03-03 09:42:58] 2026-03-03 08:01:31,930 | INFO     | mean y: 2351935.1951219514
[2026-03-03 09:42:58] 2026-03-03 08:01:31,930 | INFO     | intersect: -561992071.6043365
[2026-03-03 09:42:58] 2026-03-03 08:01:31,930 | INFO     | chi2: 0.0004256593568392983
[2026-03-03 09:42:58] 2026-03-03 08:01:31,931 | INFO     | current memory leak: 0.32 B/s (using 164 data points, chi2=0.00)
[2026-03-03 09:42:58] 2026-03-03 08:01:31,931 | INFO     | could have reported an average CPU frequency of 2757 MHz (10 samples)
[2026-03-03 09:42:58] 2026-03-03 08:01:31,931 | INFO     | ..............................
[2026-03-03 09:42:58] 2026-03-03 08:01:31,931 | INFO     | . Timing measurements:
[2026-03-03 09:42:58] 2026-03-03 08:01:31,931 | INFO     | . get job = 0 s
[2026-03-03 09:42:58] 2026-03-03 08:01:31,931 | INFO     | . initial setup = 8 s
[2026-03-03 09:42:58] 2026-03-03 08:01:31,931 | INFO     | . payload setup = 8 s
[2026-03-03 09:42:58] 2026-03-03 08:01:31,932 | INFO     | . stage-in = 0 s
[2026-03-03 09:42:58] 2026-03-03 08:01:31,932 | INFO     | . payload execution = 11579 s
[2026-03-03 09:42:58] 2026-03-03 08:01:31,932 | INFO     | . stage-out = 1 s
[2026-03-03 09:42:58] 2026-03-03 08:01:31,932 | INFO     | . log creation = 0 s
[2026-03-03 09:42:58] 2026-03-03 08:01:31,932 | INFO     | ..............................
[2026-03-03 09:42:58] 2026-03-03 08:01:32,031 | INFO     | 
[2026-03-03 09:42:58] 2026-03-03 08:01:32,031 | INFO     | job summary report
[2026-03-03 09:42:58] 2026-03-03 08:01:32,031 | INFO     | --------------------------------------------------
[2026-03-03 09:42:58] 2026-03-03 08:01:32,031 | INFO     | PanDA job id: 7032912651
[2026-03-03 09:42:58] 2026-03-03 08:01:32,031 | INFO     | task id: 48838476
[2026-03-03 09:42:58] 2026-03-03 08:01:32,032 | INFO     | errors: (none)
[2026-03-03 09:42:58] 2026-03-03 08:01:32,032 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-03 09:42:58] 2026-03-03 08:01:32,032 | INFO     | pilot state: finished 
[2026-03-03 09:42:58] 2026-03-03 08:01:32,032 | INFO     | transexitcode: 0
[2026-03-03 09:42:58] 2026-03-03 08:01:32,032 | INFO     | exeerrorcode: 0
[2026-03-03 09:42:58] 2026-03-03 08:01:32,032 | INFO     | exeerrordiag: 
[2026-03-03 09:42:58] 2026-03-03 08:01:32,032 | INFO     | exitcode: 0
[2026-03-03 09:42:58] 2026-03-03 08:01:32,032 | INFO     | exitmsg: OK
[2026-03-03 09:42:58] 2026-03-03 08:01:32,032 | INFO     | cpuconsumptiontime: 45008 s
[2026-03-03 09:42:58] 2026-03-03 08:01:32,032 | INFO     | nevents: 400
[2026-03-03 09:42:58] 2026-03-03 08:01:32,032 | INFO     | neventsw: 0
[2026-03-03 09:42:58] 2026-03-03 08:01:32,033 | INFO     | pid: 1589008
[2026-03-03 09:42:58] 2026-03-03 08:01:32,033 | INFO     | pgrp: 1589008
[2026-03-03 09:42:58] 2026-03-03 08:01:32,033 | INFO     | corecount: 4
[2026-03-03 09:42:58] 2026-03-03 08:01:32,033 | INFO     | event service: False
[2026-03-03 09:42:58] 2026-03-03 08:01:32,033 | INFO     | sizes: {0: 2281156, 1: 2282285, 12: 2282285, 11591: 2312259, 11592: 2312258, 11594: 2321518, 11595: 2321656}
[2026-03-03 09:42:58] 2026-03-03 08:01:32,033 | INFO     | --------------------------------------------------
[2026-03-03 09:42:58] 2026-03-03 08:01:32,033 | INFO     | 
[2026-03-03 09:42:58] 2026-03-03 08:01:32,033 | INFO     | executing command: ls -lF /scratch/boinc/var/slot60/slots/0
[2026-03-03 09:42:58] 2026-03-03 08:01:32,068 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-03 09:42:58] 2026-03-03 08:01:32,068 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-03 09:42:58] 2026-03-03 08:01:32,068 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-03 09:42:58] 2026-03-03 08:01:32,068 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-03 09:42:58] 2026-03-03 08:01:32,068 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-03 09:42:58] 2026-03-03 08:01:32,069 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-03 09:42:58] 2026-03-03 08:01:32,069 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-03 09:42:58] 2026-03-03 08:01:32,069 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-03 09:42:58] 2026-03-03 08:01:32,069 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-03 09:42:58] 2026-03-03 08:01:32,069 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-03 09:42:58] 2026-03-03 08:01:32,069 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-03 09:42:58] 2026-03-03 08:01:32,069 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-03 09:42:58] 2026-03-03 08:01:32,070 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-03 09:42:58] 2026-03-03 08:01:32,070 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-03 09:42:58] 2026-03-03 08:01:32,070 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-03 09:42:58] 2026-03-03 08:01:32,070 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-03 09:42:58] 2026-03-03 08:01:32,070 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-03 09:42:58] 2026-03-03 08:01:32,070 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-03 09:42:58] 2026-03-03 08:01:32,070 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-03 09:42:58] 2026-03-03 08:01:32,071 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-03 09:42:58] 2026-03-03 08:01:32,071 | INFO     | job 7032912651 has completed (purged errors)
[2026-03-03 09:42:58] 2026-03-03 08:01:32,071 | INFO     | overall cleanup function is called
[2026-03-03 09:42:58] 2026-03-03 08:01:33,081 | INFO     | --- collectZombieJob: --- 10, [1589008]
[2026-03-03 09:42:58] 2026-03-03 08:01:33,081 | INFO     | zombie collector waiting for pid 1589008
[2026-03-03 09:42:58] 2026-03-03 08:01:33,081 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-03 09:42:58] 2026-03-03 08:01:33,081 | INFO     | collected zombie processes
[2026-03-03 09:42:58] 2026-03-03 08:01:33,081 | INFO     | will attempt to kill all subprocesses of pid=1589008
[2026-03-03 09:42:58] 2026-03-03 08:01:33,829 | INFO     | process IDs to be killed: [1589008] (in reverse order)
[2026-03-03 09:42:58] 2026-03-03 08:01:34,133 | WARNING  | found no corresponding commands to process id(s)
[2026-03-03 09:42:58] 2026-03-03 08:01:34,134 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-03 09:42:58] 2026-03-03 08:01:34,163 | INFO     | did not find any defunct processes belonging to 1589008
[2026-03-03 09:42:58] 2026-03-03 08:01:34,188 | INFO     | did not find any defunct processes belonging to 1589008
[2026-03-03 09:42:58] 2026-03-03 08:01:34,188 | INFO     | ready for new job
[2026-03-03 09:42:58] 2026-03-03 08:01:34,188 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-03 09:42:58] 2026-03-03 08:01:34,191 | INFO     | **************************************
[2026-03-03 09:42:58] 2026-03-03 08:01:34,191 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-03 09:42:58] 2026-03-03 08:01:34,191 | INFO     | **************************************
[2026-03-03 09:42:58] 2026-03-03 08:01:34,191 | INFO     | 
[2026-03-03 09:42:58] 2026-03-03 08:01:34,200 | INFO     | architecture information:
[2026-03-03 09:42:58] 2026-03-03 08:01:34,201 | INFO     | executing command: cat /etc/os-release
[2026-03-03 09:42:58] 2026-03-03 08:01:34,231 | INFO     | cat /etc/os-release:
[2026-03-03 09:42:58] NAME="CentOS Linux"
[2026-03-03 09:42:58] VERSION="7 (Core)"
[2026-03-03 09:42:58] ID="centos"
[2026-03-03 09:42:58] ID_LIKE="rhel fedora"
[2026-03-03 09:42:58] VERSION_ID="7"
[2026-03-03 09:42:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-03 09:42:58] ANSI_COLOR="0;31"
[2026-03-03 09:42:58] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-03 09:42:58] HOME_URL="https://www.centos.org/"
[2026-03-03 09:42:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-03 09:42:58] 
[2026-03-03 09:42:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-03 09:42:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-03 09:42:58] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-03 09:42:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-03 09:42:58] 
[2026-03-03 09:42:58] 2026-03-03 08:01:34,232 | INFO     | **************************************
[2026-03-03 09:42:58] 2026-03-03 08:01:34,735 | INFO     | executing command: df -mP /scratch/boinc/var/slot60/slots/0
[2026-03-03 09:42:58] 2026-03-03 08:01:34,762 | INFO     | sufficient remaining disk space (3325989748736 B)
[2026-03-03 09:42:58] 2026-03-03 08:01:34,765 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-03 09:42:58] 2026-03-03 08:01:34,766 | INFO     | current server update state: UPDATING_FINAL
[2026-03-03 09:42:58] 2026-03-03 08:01:34,766 | INFO     | update_server=False
[2026-03-03 09:42:58] 2026-03-03 08:01:34,766 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-03 09:42:58] 2026-03-03 08:01:34,766 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-03 09:42:58] 2026-03-03 08:01:34,915 | INFO     | all job control threads have been joined
[2026-03-03 09:42:58] 2026-03-03 08:01:34,956 | INFO     | all data control threads have been joined
[2026-03-03 09:42:58] 2026-03-03 08:01:35,265 | INFO     | all payload control threads have been joined
[2026-03-03 09:42:58] 2026-03-03 08:01:35,468 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-03 09:42:58] 2026-03-03 08:01:35,468 | INFO     | aborting loop
[2026-03-03 09:42:58] 2026-03-03 08:01:35,771 | INFO     | [job] retrieve thread has finished
[2026-03-03 09:42:58] 2026-03-03 08:01:35,835 | INFO     | [payload] execute_payloads thread has finished
[2026-03-03 09:42:58] 2026-03-03 08:01:35,920 | INFO     | [job] control thread has finished
[2026-03-03 09:42:58] 2026-03-03 08:01:35,958 | INFO     | [data] control thread has finished
[2026-03-03 09:42:58] 2026-03-03 08:01:36,145 | INFO     | [data] copytool_in thread has finished
[2026-03-03 09:42:58] 2026-03-03 08:01:36,271 | INFO     | [payload] control thread has finished
[2026-03-03 09:42:58] 2026-03-03 08:01:36,342 | INFO     | [payload] validate_post thread has finished
[2026-03-03 09:42:58] 2026-03-03 08:01:36,473 | INFO     | [job] job monitor thread has finished
[2026-03-03 09:42:58] 2026-03-03 08:01:36,658 | INFO     | [job] validate thread has finished
[2026-03-03 09:42:58] 2026-03-03 08:01:36,731 | INFO     | [payload] failed_post thread has finished
[2026-03-03 09:42:58] 2026-03-03 08:01:36,772 | INFO     | [data] copytool_out thread has finished
[2026-03-03 09:42:58] 2026-03-03 08:01:37,042 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-03 09:42:58] 2026-03-03 08:01:37,113 | INFO     | [payload] validate_pre thread has finished
[2026-03-03 09:42:58] 2026-03-03 08:01:37,201 | INFO     | [job] create_data_payload thread has finished
[2026-03-03 09:42:58] 2026-03-03 08:01:37,678 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-03 09:42:58] 2026-03-03 08:01:38,047 | INFO     | [job] queue monitor thread has finished
[2026-03-03 09:42:58] 2026-03-03 08:01:41,684 | INFO     | [data] queue_monitor thread has finished
[2026-03-03 09:42:58] 2026-03-03 08:01:45,184 | INFO     | job.realtimelogging is not enabled
[2026-03-03 09:42:58] 2026-03-03 08:01:46,189 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-03 09:42:58] 2026-03-03 08:02:05,542 | INFO     | PID=1583879 has CPU usage=13.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-03-03 09:42:58] 2026-03-03 08:02:05,543 | INFO     | .. there are 18 such processes running
[2026-03-03 09:42:58] 2026-03-03 08:02:05,543 | INFO     | found 0 job(s) in 20 queues
[2026-03-03 09:42:58] 2026-03-03 08:02:05,543 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-03 09:42:58] 2026-03-03 08:02:05,543 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-03 09:42:58] 2026-03-03 08:02:24,329 | INFO     | [monitor] cgroup control has ended
[2026-03-03 09:42:58] 2026-03-03 08:02:25,139 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22420649883456)>', '<ExcThread(monitor, started 22420410083072)>']
[2026-03-03 09:42:58] 2026-03-03 08:02:25,642 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-03 09:42:58] 2026-03-03 08:02:25,642 | INFO     | [monitor] control thread has ended
[2026-03-03 09:42:58] 2026-03-03 08:02:30,164 | INFO     | all workflow threads have been joined
[2026-03-03 09:42:58] 2026-03-03 08:02:30,164 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-03 09:42:58] 2026-03-03 08:02:30,164 | INFO     | traces error code: 0
[2026-03-03 09:42:58] 2026-03-03 08:02:30,165 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-03 09:42:58] 2026-03-03 08:02:30,315 [wrapper] ==== pilot stdout END ====
[2026-03-03 09:42:58] 2026-03-03 08:02:30,322 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-03 09:42:58] 2026-03-03 08:02:30,326 [wrapper] pilotpid: 1583879
[2026-03-03 09:42:58] 2026-03-03 08:02:30,329 [wrapper] Pilot exit status: 0
[2026-03-03 09:42:58] 2026-03-03 08:02:30,344 [wrapper] pandaids: 7032912651
[2026-03-03 09:42:58] 2026-03-03 08:02:30,546 [wrapper] cleanup supervisor_pilot 1883738 1583880
[2026-03-03 09:42:58] 2026-03-03 08:02:30,551 [wrapper] Test setup, not cleaning
[2026-03-03 09:42:58] 2026-03-03 08:02:30,555 [wrapper] apfmon messages muted
[2026-03-03 09:42:58] 2026-03-03 08:02:30,559 [wrapper] ==== wrapper stdout END ====
[2026-03-03 09:42:58] 2026-03-03 08:02:30,562 [wrapper] ==== wrapper stderr END ====
[2026-03-03 09:42:58]  *** Error codes and diagnostics ***
[2026-03-03 09:42:58]     "exeErrorCode": 0,
[2026-03-03 09:42:58]     "exeErrorDiag": "",
[2026-03-03 09:42:58]     "pilotErrorCode": 0,
[2026-03-03 09:42:58]     "pilotErrorDiag": "",
[2026-03-03 09:42:58]  *** Listing of results directory ***
[2026-03-03 09:42:58] total 484356
[2026-03-03 09:42:58] -rw-r--r-- 1 boinc boinc    584627 Feb 28 09:11 pilot3.tar.gz
[2026-03-03 09:42:58] -rwx------ 1 boinc boinc     36322 Feb 28 09:11 runpilot2-wrapper.sh
[2026-03-03 09:42:58] -rw-r--r-- 1 boinc boinc      5111 Feb 28 09:13 queuedata.json
[2026-03-03 09:42:58] -rw-r--r-- 1 boinc boinc       100 Mar  3 04:48 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-03 09:42:58] -rwxr-xr-x 1 boinc boinc      7986 Mar  3 04:48 run_atlas
[2026-03-03 09:42:58] -rw-r--r-- 1 boinc boinc       105 Mar  3 04:48 job.xml
[2026-03-03 09:42:58] -rw-r--r-- 2 boinc boinc 277613191 Mar  3 05:47 EVNT.48220149._000039.pool.root.1
[2026-03-03 09:42:58] -rw-r--r-- 1 boinc boinc      6696 Mar  3 05:47 init_data.xml
[2026-03-03 09:42:58] -rw-r--r-- 2 boinc boinc     15845 Mar  3 05:47 start_atlas.sh
[2026-03-03 09:42:58] drwxrwx--x 2 boinc boinc      4096 Mar  3 05:47 shared
[2026-03-03 09:42:58] -rw-r--r-- 2 boinc boinc    597981 Mar  3 05:47 input.tar.gz
[2026-03-03 09:42:58] -rw-r--r-- 1 boinc boinc         0 Mar  3 05:47 boinc_lockfile
[2026-03-03 09:42:58] -rw-r--r-- 1 boinc boinc      2587 Mar  3 05:47 pandaJob.out
[2026-03-03 09:42:58] -rw------- 1 boinc boinc    997730 Mar  3 05:47 agis_schedconf.cvmfs.json
[2026-03-03 09:42:58] -rw------- 1 boinc boinc       443 Mar  3 05:48 workernode_map.json
[2026-03-03 09:42:58] drwx------ 5 boinc boinc      4096 Mar  3 05:48 pilot3
[2026-03-03 09:42:58] -rw------- 1 boinc boinc 210478968 Mar  3 09:00 HITS.48838476._000983.pool.root.1
[2026-03-03 09:42:58] -rw-r--r-- 1 boinc boinc       528 Mar  3 09:00 boinc_task_state.xml
[2026-03-03 09:42:58] -rw------- 1 boinc boinc      1023 Mar  3 09:01 memory_monitor_summary.json
[2026-03-03 09:42:58] -rw------- 1 boinc boinc   1512931 Mar  3 09:01 agis_ddmendpoints.agis.ALL.json
[2026-03-03 09:42:58] -rw------- 1 boinc boinc    363426 Mar  3 09:01 log.48838476._000983.job.log.tgz.1
[2026-03-03 09:42:58] -rw------- 1 boinc boinc      6352 Mar  3 09:01 heartbeat.json
[2026-03-03 09:42:58] -rw------- 1 boinc boinc        95 Mar  3 09:01 pilot_heartbeat.json
[2026-03-03 09:42:58] -rw------- 1 boinc boinc      4904 Mar  3 09:02 pilotlog.txt
[2026-03-03 09:42:58] -rw------- 1 boinc boinc   1616528 Mar  3 09:02 log.48838476._000983.job.log.1
[2026-03-03 09:42:58] -rw------- 1 boinc boinc       357 Mar  3 09:02 output.list
[2026-03-03 09:42:58] -rw-r--r-- 1 boinc boinc       620 Mar  3 09:02 runtime_log
[2026-03-03 09:42:58] -rw------- 1 boinc boinc   1996800 Mar  3 09:02 result.tar.gz
[2026-03-03 09:42:58] -rw-r--r-- 1 boinc boinc      9205 Mar  3 09:02 runtime_log.err
[2026-03-03 09:42:58] -rw------- 1 boinc boinc       665 Mar  3 09:02 D9FLDmmbUG9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmAg6KDmXTXeNn.diag
[2026-03-03 09:42:58] -rw-r--r-- 1 boinc boinc        26 Mar  3 09:42 wrapper_checkpoint.txt
[2026-03-03 09:42:58] -rw-r--r-- 1 boinc boinc      8192 Mar  3 09:42 boinc_mmap_file
[2026-03-03 09:42:58] -rw-r--r-- 1 boinc boinc     21113 Mar  3 09:42 stderr.txt
[2026-03-03 09:42:58] HITS file was successfully produced:
[2026-03-03 09:42:58] -rw------- 1 boinc boinc 210478968 Mar  3 09:00 shared/HITS.pool.root.1
[2026-03-03 09:42:58]  *** Contents of shared directory: ***
[2026-03-03 09:42:58] total 479216
[2026-03-03 09:42:58] -rw-r--r-- 2 boinc boinc 277613191 Mar  3 05:47 ATLAS.root_0
[2026-03-03 09:42:58] -rw-r--r-- 2 boinc boinc     15845 Mar  3 05:47 start_atlas.sh
[2026-03-03 09:42:58] -rw-r--r-- 2 boinc boinc    597981 Mar  3 05:47 input.tar.gz
[2026-03-03 09:42:58] -rw------- 1 boinc boinc 210478968 Mar  3 09:00 HITS.pool.root.1
[2026-03-03 09:42:58] -rw------- 1 boinc boinc   1996800 Mar  3 09:02 result.tar.gz
09:42:59 (1579662): run_atlas exited; CPU time 45750.396268
09:42:59 (1579662): called boinc_finish(0)

</stderr_txt>
]]>

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