Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:46:04 (18297): wrapper (7.7.26015): starting
11:46:04 (18297): wrapper: running run_atlas (--nthreads 8)
[2026-02-28 11:46:04] Arguments: --nthreads 8
[2026-02-28 11:46:04] Threads: 8
[2026-02-28 11:46:04] Checking for CVMFS
[2026-02-28 11:46:04] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-28 11:46:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-28 11:46:20] Running cvmfs_config stat atlas.cern.ch
[2026-02-28 11:46:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-28 11:46:20] 2.11.2.0 17738 107314 130052 156729 3 50 24018093 25165825 0 130560 131 33049039 99.798 26942450 1067 http://s1sampa-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch http://141.99.253.245:3128/ 1
[2026-02-28 11:46:20] CVMFS is ok
[2026-02-28 11:46:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-28 11:46:20] Checking for apptainer binary...
[2026-02-28 11:46:20] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-28 11:46:20] Running /usr/bin/apptainer --version
[2026-02-28 11:46:20] apptainer version 1.3.2-1.el7
[2026-02-28 11:46:20] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-28 11:46:22] cg-vwn450.simple-grid.lan
[2026-02-28 11:46:22] apptainer works
[2026-02-28 11:46:22] Set ATHENA_PROC_NUMBER=8
[2026-02-28 11:46:22] Set ATHENA_CORE_NUMBER=8
[2026-02-28 11:46:22] Starting ATLAS job with PandaID=7032232165
[2026-02-28 11:46:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/10 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-28 13:59:53]  *** The last 200 lines of the pilot log: ***
[2026-02-28 13:59:53] 2026-02-28 12:58:59,222 | INFO     | monitor loop #589: job 0:7032232165 is in state 'finished'
[2026-02-28 13:59:53] 2026-02-28 12:58:59,222 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-02-28 13:59:53] 2026-02-28 12:58:59,251 | INFO     | job 7032232165 has state=finished
[2026-02-28 13:59:53] 2026-02-28 12:58:59,251 | INFO     | preparing for final server update for job 7032232165 in state='finished'
[2026-02-28 13:59:53] 2026-02-28 12:58:59,252 | INFO     | reading metadata from: /var/lib/boinc/slots/10/PanDA_Pilot-7032232165/jobReport.json
[2026-02-28 13:59:53] 2026-02-28 12:58:59,255 | INFO     | added worker_node to metadata from /var/lib/boinc/slots/10/workernode_map.json
[2026-02-28 13:59:53] 2026-02-28 12:58:59,255 | INFO     | this job has now completed (state=finished)
[2026-02-28 13:59:53] 2026-02-28 12:58:59,256 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-28 13:59:53] 2026-02-28 12:58:59,256 | INFO     | log transfer has been attempted: DONE
[2026-02-28 13:59:53] 2026-02-28 12:58:59,256 | INFO     | job 7032232165 has finished - writing final server update
[2026-02-28 13:59:53] 2026-02-28 12:58:59,256 | INFO     | total number of processed events: 400 (read)
[2026-02-28 13:59:53] 2026-02-28 12:58:59,258 | INFO     | using path: /var/lib/boinc/slots/10/PanDA_Pilot-7032232165/memory_monitor_summary.json (trf name=prmon)
[2026-02-28 13:59:53] 2026-02-28 12:58:59,259 | INFO     | extracted standard info from prmon json
[2026-02-28 13:59:53] 2026-02-28 12:58:59,259 | INFO     | extracted standard memory fields from prmon json
[2026-02-28 13:59:53] 2026-02-28 12:58:59,259 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-28 13:59:53] 2026-02-28 12:58:59,260 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-28 13:59:53] 2026-02-28 12:58:59,260 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-28 13:59:53] 2026-02-28 12:58:59,263 | INFO     | fitting pss+swap vs Time
[2026-02-28 13:59:53] 2026-02-28 12:58:59,263 | INFO     | sum of square deviations: 665612480.0
[2026-02-28 13:59:53] 2026-02-28 12:58:59,264 | INFO     | sum of deviations: 5402016040.000002
[2026-02-28 13:59:53] 2026-02-28 12:58:59,264 | INFO     | mean x: 1772279582.0
[2026-02-28 13:59:53] 2026-02-28 12:58:59,264 | INFO     | mean y: 2526856.581395349
[2026-02-28 13:59:53] 2026-02-28 12:58:59,265 | INFO     | intersect: -14381041686.677437
[2026-02-28 13:59:53] 2026-02-28 12:58:59,265 | INFO     | chi2: 1.6169400367494136
[2026-02-28 13:59:53] 2026-02-28 12:58:59,265 | INFO     | sum of square deviations: 591173875.0
[2026-02-28 13:59:53] 2026-02-28 12:58:59,266 | INFO     | sum of deviations: 5205564899.500003
[2026-02-28 13:59:53] 2026-02-28 12:58:59,266 | INFO     | mean x: 1772279429.5
[2026-02-28 13:59:53] 2026-02-28 12:58:59,266 | INFO     | mean y: 2526453.9274193547
[2026-02-28 13:59:53] 2026-02-28 12:58:59,267 | INFO     | intersect: -15603230127.097221
[2026-02-28 13:59:53] 2026-02-28 12:58:59,267 | INFO     | chi2: 1.6186448846357282
[2026-02-28 13:59:53] 2026-02-28 12:58:59,267 | INFO     | current chi2=1.6186448846357282 (change=-0.10543667962739994 %)
[2026-02-28 13:59:53] 2026-02-28 12:58:59,267 | INFO     | right removable region: 123
[2026-02-28 13:59:53] 2026-02-28 12:58:59,267 | INFO     | sum of square deviations: 591173875.0
[2026-02-28 13:59:53] 2026-02-28 12:58:59,268 | INFO     | sum of deviations: -14496702338.0
[2026-02-28 13:59:53] 2026-02-28 12:58:59,268 | INFO     | mean x: 1772279734.5
[2026-02-28 13:59:53] 2026-02-28 12:58:59,268 | INFO     | mean y: 2566906.64516129
[2026-02-28 13:59:53] 2026-02-28 12:58:59,269 | INFO     | intersect: 43462220415.04177
[2026-02-28 13:59:53] 2026-02-28 12:58:59,269 | INFO     | chi2: 0.10634720539917951
[2026-02-28 13:59:53] 2026-02-28 12:58:59,269 | INFO     | current chi2=0.10634720539917951 (change=93.4229344946537 %)
[2026-02-28 13:59:53] 2026-02-28 12:58:59,269 | INFO     | sum of square deviations: 522502820.0
[2026-02-28 13:59:53] 2026-02-28 12:58:59,270 | INFO     | sum of deviations: -11155416846.0
[2026-02-28 13:59:53] 2026-02-28 12:58:59,270 | INFO     | mean x: 1772279887.0
[2026-02-28 13:59:53] 2026-02-28 12:58:59,270 | INFO     | mean y: 2559454.1344537814
[2026-02-28 13:59:53] 2026-02-28 12:58:59,271 | INFO     | intersect: 37840672762.81818
[2026-02-28 13:59:53] 2026-02-28 12:58:59,271 | INFO     | chi2: 0.09948970093847094
[2026-02-28 13:59:53] 2026-02-28 12:58:59,271 | INFO     | current chi2=0.09948970093847094 (change=6.4482225320059765 %)
[2026-02-28 13:59:53] 2026-02-28 12:58:59,271 | INFO     | left removable region: 20
[2026-02-28 13:59:53] 2026-02-28 12:58:59,271 | INFO     | sum of square deviations: 338804492.0
[2026-02-28 13:59:53] 2026-02-28 12:58:59,272 | INFO     | sum of deviations: -2502242936.0000005
[2026-02-28 13:59:53] 2026-02-28 12:58:59,272 | INFO     | mean x: 1772280009.0
[2026-02-28 13:59:53] 2026-02-28 12:58:59,272 | INFO     | mean y: 2537655.844660194
[2026-02-28 13:59:53] 2026-02-28 12:58:59,272 | INFO     | intersect: 13091724009.177505
[2026-02-28 13:59:53] 2026-02-28 12:58:59,273 | INFO     | chi2: 0.042495500443187485
[2026-02-28 13:59:53] 2026-02-28 12:58:59,273 | INFO     | current memory leak: -7.39 B/s (using 103 data points, chi2=0.04)
[2026-02-28 13:59:53] 2026-02-28 12:58:59,273 | INFO     | could have reported an average CPU frequency of 1999 MHz (8 samples)
[2026-02-28 13:59:53] 2026-02-28 12:58:59,274 | INFO     | ..............................
[2026-02-28 13:59:53] 2026-02-28 12:58:59,274 | INFO     | . Timing measurements:
[2026-02-28 13:59:53] 2026-02-28 12:58:59,274 | INFO     | . get job = 0 s
[2026-02-28 13:59:53] 2026-02-28 12:58:59,274 | INFO     | . initial setup = 6 s
[2026-02-28 13:59:53] 2026-02-28 12:58:59,274 | INFO     | . payload setup = 7 s
[2026-02-28 13:59:53] 2026-02-28 12:58:59,274 | INFO     | . stage-in = 0 s
[2026-02-28 13:59:53] 2026-02-28 12:58:59,274 | INFO     | . payload execution = 7859 s
[2026-02-28 13:59:53] 2026-02-28 12:58:59,274 | INFO     | . stage-out = 1 s
[2026-02-28 13:59:53] 2026-02-28 12:58:59,274 | INFO     | . log creation = 0 s
[2026-02-28 13:59:53] 2026-02-28 12:58:59,274 | INFO     | ..............................
[2026-02-28 13:59:53] 2026-02-28 12:58:59,390 | INFO     | 
[2026-02-28 13:59:53] 2026-02-28 12:58:59,390 | INFO     | job summary report
[2026-02-28 13:59:53] 2026-02-28 12:58:59,390 | INFO     | --------------------------------------------------
[2026-02-28 13:59:53] 2026-02-28 12:58:59,390 | INFO     | PanDA job id: 7032232165
[2026-02-28 13:59:53] 2026-02-28 12:58:59,390 | INFO     | task id: 48838615
[2026-02-28 13:59:53] 2026-02-28 12:58:59,390 | INFO     | errors: (none)
[2026-02-28 13:59:53] 2026-02-28 12:58:59,391 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-28 13:59:53] 2026-02-28 12:58:59,391 | INFO     | pilot state: finished 
[2026-02-28 13:59:53] 2026-02-28 12:58:59,391 | INFO     | transexitcode: 0
[2026-02-28 13:59:53] 2026-02-28 12:58:59,391 | INFO     | exeerrorcode: 0
[2026-02-28 13:59:53] 2026-02-28 12:58:59,391 | INFO     | exeerrordiag: 
[2026-02-28 13:59:53] 2026-02-28 12:58:59,391 | INFO     | exitcode: 0
[2026-02-28 13:59:53] 2026-02-28 12:58:59,391 | INFO     | exitmsg: OK
[2026-02-28 13:59:53] 2026-02-28 12:58:59,391 | INFO     | cpuconsumptiontime: 59808 s
[2026-02-28 13:59:53] 2026-02-28 12:58:59,391 | INFO     | nevents: 400
[2026-02-28 13:59:53] 2026-02-28 12:58:59,391 | INFO     | neventsw: 0
[2026-02-28 13:59:53] 2026-02-28 12:58:59,392 | INFO     | pid: 26760
[2026-02-28 13:59:53] 2026-02-28 12:58:59,392 | INFO     | pgrp: 26760
[2026-02-28 13:59:53] 2026-02-28 12:58:59,392 | INFO     | corecount: 8
[2026-02-28 13:59:53] 2026-02-28 12:58:59,392 | INFO     | event service: False
[2026-02-28 13:59:53] 2026-02-28 12:58:59,392 | INFO     | sizes: {0: 2281793, 1: 2282254, 12: 2282254, 7869: 2309892, 7870: 2309891, 7871: 2319131, 7874: 2319269}
[2026-02-28 13:59:53] 2026-02-28 12:58:59,392 | INFO     | --------------------------------------------------
[2026-02-28 13:59:53] 2026-02-28 12:58:59,392 | INFO     | 
[2026-02-28 13:59:53] 2026-02-28 12:58:59,392 | INFO     | executing command: ls -lF /var/lib/boinc/slots/10
[2026-02-28 13:59:53] 2026-02-28 12:58:59,421 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-28 13:59:53] 2026-02-28 12:58:59,421 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-28 13:59:53] 2026-02-28 12:58:59,421 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-28 13:59:53] 2026-02-28 12:58:59,422 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-28 13:59:53] 2026-02-28 12:58:59,422 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-28 13:59:53] 2026-02-28 12:58:59,422 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-28 13:59:53] 2026-02-28 12:58:59,422 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-28 13:59:53] 2026-02-28 12:58:59,422 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-28 13:59:53] 2026-02-28 12:58:59,422 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-28 13:59:53] 2026-02-28 12:58:59,422 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-28 13:59:53] 2026-02-28 12:58:59,422 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-28 13:59:53] 2026-02-28 12:58:59,423 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-28 13:59:53] 2026-02-28 12:58:59,423 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-28 13:59:53] 2026-02-28 12:58:59,423 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-28 13:59:53] 2026-02-28 12:58:59,423 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-28 13:59:53] 2026-02-28 12:58:59,423 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-28 13:59:53] 2026-02-28 12:58:59,423 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-28 13:59:53] 2026-02-28 12:58:59,423 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-28 13:59:53] 2026-02-28 12:58:59,423 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-28 13:59:53] 2026-02-28 12:58:59,423 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-28 13:59:53] 2026-02-28 12:58:59,424 | INFO     | job 7032232165 has completed (purged errors)
[2026-02-28 13:59:53] 2026-02-28 12:58:59,424 | INFO     | overall cleanup function is called
[2026-02-28 13:59:53] 2026-02-28 12:59:00,432 | INFO     | --- collectZombieJob: --- 10, [26760]
[2026-02-28 13:59:53] 2026-02-28 12:59:00,432 | INFO     | zombie collector waiting for pid 26760
[2026-02-28 13:59:53] 2026-02-28 12:59:00,433 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-28 13:59:53] 2026-02-28 12:59:00,433 | INFO     | collected zombie processes
[2026-02-28 13:59:53] 2026-02-28 12:59:00,433 | INFO     | will attempt to kill all subprocesses of pid=26760
[2026-02-28 13:59:53] 2026-02-28 12:59:00,489 | INFO     | process IDs to be killed: [26760] (in reverse order)
[2026-02-28 13:59:53] 2026-02-28 12:59:00,537 | WARNING  | found no corresponding commands to process id(s)
[2026-02-28 13:59:53] 2026-02-28 12:59:00,537 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-28 13:59:53] 2026-02-28 12:59:00,539 | INFO     | did not find any defunct processes belonging to 26760
[2026-02-28 13:59:53] 2026-02-28 12:59:00,541 | INFO     | did not find any defunct processes belonging to 26760
[2026-02-28 13:59:53] 2026-02-28 12:59:00,541 | INFO     | ready for new job
[2026-02-28 13:59:53] 2026-02-28 12:59:00,541 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-28 13:59:53] 2026-02-28 12:59:00,543 | INFO     | **************************************
[2026-02-28 13:59:53] 2026-02-28 12:59:00,543 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-28 13:59:53] 2026-02-28 12:59:00,543 | INFO     | **************************************
[2026-02-28 13:59:53] 2026-02-28 12:59:00,543 | INFO     | 
[2026-02-28 13:59:53] 2026-02-28 12:59:00,544 | INFO     | pilot is running in a VM
[2026-02-28 13:59:53] 2026-02-28 12:59:00,544 | INFO     | architecture information:
[2026-02-28 13:59:53] 2026-02-28 12:59:00,545 | INFO     | executing command: cat /etc/os-release
[2026-02-28 13:59:53] 2026-02-28 12:59:00,562 | INFO     | cat /etc/os-release:
[2026-02-28 13:59:53] NAME="CentOS Linux"
[2026-02-28 13:59:53] VERSION="7 (Core)"
[2026-02-28 13:59:53] ID="centos"
[2026-02-28 13:59:53] ID_LIKE="rhel fedora"
[2026-02-28 13:59:53] VERSION_ID="7"
[2026-02-28 13:59:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-28 13:59:53] ANSI_COLOR="0;31"
[2026-02-28 13:59:53] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-28 13:59:53] HOME_URL="https://www.centos.org/"
[2026-02-28 13:59:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-28 13:59:53] 
[2026-02-28 13:59:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-28 13:59:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-28 13:59:53] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-28 13:59:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-28 13:59:53] 
[2026-02-28 13:59:53] 2026-02-28 12:59:00,562 | INFO     | **************************************
[2026-02-28 13:59:53] 2026-02-28 12:59:01,065 | INFO     | executing command: df -mP /var/lib/boinc/slots/10
[2026-02-28 13:59:53] 2026-02-28 12:59:01,085 | INFO     | sufficient remaining disk space (497943576576 B)
[2026-02-28 13:59:53] 2026-02-28 12:59:01,085 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-28 13:59:53] 2026-02-28 12:59:01,086 | INFO     | current server update state: UPDATING_FINAL
[2026-02-28 13:59:53] 2026-02-28 12:59:01,086 | INFO     | update_server=False
[2026-02-28 13:59:53] 2026-02-28 12:59:01,086 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-28 13:59:53] 2026-02-28 12:59:01,086 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-28 13:59:53] 2026-02-28 12:59:01,087 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-28 13:59:53] 2026-02-28 12:59:01,087 | INFO     | aborting loop
[2026-02-28 13:59:53] 2026-02-28 12:59:01,628 | INFO     | all job control threads have been joined
[2026-02-28 13:59:53] 2026-02-28 12:59:01,644 | INFO     | all data control threads have been joined
[2026-02-28 13:59:53] 2026-02-28 12:59:01,647 | INFO     | all payload control threads have been joined
[2026-02-28 13:59:53] 2026-02-28 12:59:02,002 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-28 13:59:53] 2026-02-28 12:59:02,092 | INFO     | [job] retrieve thread has finished
[2026-02-28 13:59:53] 2026-02-28 12:59:02,092 | INFO     | [job] queue monitor thread has finished
[2026-02-28 13:59:53] 2026-02-28 12:59:02,093 | INFO     | [job] job monitor thread has finished
[2026-02-28 13:59:53] 2026-02-28 12:59:02,361 | INFO     | [payload] failed_post thread has finished
[2026-02-28 13:59:53] 2026-02-28 12:59:02,432 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-28 13:59:53] 2026-02-28 12:59:02,611 | INFO     | [data] copytool_in thread has finished
[2026-02-28 13:59:53] 2026-02-28 12:59:02,616 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-28 13:59:53] 2026-02-28 12:59:02,633 | INFO     | [job] control thread has finished
[2026-02-28 13:59:53] 2026-02-28 12:59:02,650 | INFO     | [data] control thread has finished
[2026-02-28 13:59:53] 2026-02-28 12:59:02,652 | INFO     | [payload] control thread has finished
[2026-02-28 13:59:53] 2026-02-28 12:59:02,799 | INFO     | [payload] validate_post thread has finished
[2026-02-28 13:59:53] 2026-02-28 12:59:02,904 | INFO     | [job] create_data_payload thread has finished
[2026-02-28 13:59:53] 2026-02-28 12:59:02,930 | INFO     | [job] validate thread has finished
[2026-02-28 13:59:53] 2026-02-28 12:59:03,476 | INFO     | [payload] execute_payloads thread has finished
[2026-02-28 13:59:53] 2026-02-28 12:59:03,543 | INFO     | [payload] validate_pre thread has finished
[2026-02-28 13:59:53] 2026-02-28 12:59:04,008 | INFO     | [data] copytool_out thread has finished
[2026-02-28 13:59:53] 2026-02-28 12:59:06,623 | INFO     | [data] queue_monitor thread has finished
[2026-02-28 13:59:53] 2026-02-28 12:59:31,638 | INFO     | PID=22350 has CPU usage=3.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-02-28 13:59:53] 2026-02-28 12:59:31,639 | INFO     | found 0 job(s) in 20 queues
[2026-02-28 13:59:53] 2026-02-28 12:59:31,639 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-28 13:59:53] 2026-02-28 12:59:31,639 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-28 13:59:53] 2026-02-28 12:59:46,053 | INFO     | [monitor] cgroup control has ended
[2026-02-28 13:59:53] 2026-02-28 12:59:47,940 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139708930758464)>', '<ExcThread(monitor, started 139708340352768)>']
[2026-02-28 13:59:53] 2026-02-28 12:59:48,727 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-28 13:59:53] 2026-02-28 12:59:48,728 | INFO     | [monitor] control thread has ended
[2026-02-28 13:59:53] 2026-02-28 12:59:52,949 | INFO     | all workflow threads have been joined
[2026-02-28 13:59:53] 2026-02-28 12:59:52,949 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-28 13:59:53] 2026-02-28 12:59:52,949 | INFO     | traces error code: 0
[2026-02-28 13:59:53] 2026-02-28 12:59:52,950 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-28 13:59:53] 2026-02-28 12:59:53,092 [wrapper] ==== pilot stdout END ====
[2026-02-28 13:59:53] 2026-02-28 12:59:53,096 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-28 13:59:53] 2026-02-28 12:59:53,100 [wrapper] pilotpid: 22350
[2026-02-28 13:59:53] 2026-02-28 12:59:53,104 [wrapper] Pilot exit status: 0
[2026-02-28 13:59:53] 2026-02-28 12:59:53,119 [wrapper] pandaids: 7032232165
[2026-02-28 13:59:53] 2026-02-28 12:59:53,153 [wrapper] cleanup supervisor_pilot 32010 22351
[2026-02-28 13:59:53] 2026-02-28 12:59:53,157 [wrapper] Test setup, not cleaning
[2026-02-28 13:59:53] 2026-02-28 12:59:53,166 [wrapper] apfmon messages muted
[2026-02-28 13:59:53] 2026-02-28 12:59:53,170 [wrapper] ==== wrapper stdout END ====
[2026-02-28 13:59:53] 2026-02-28 12:59:53,173 [wrapper] ==== wrapper stderr END ====
[2026-02-28 13:59:53]  *** Error codes and diagnostics ***
[2026-02-28 13:59:53]     "exeErrorCode": 0,
[2026-02-28 13:59:53]     "exeErrorDiag": "",
[2026-02-28 13:59:53]     "pilotErrorCode": 0,
[2026-02-28 13:59:53]     "pilotErrorDiag": "",
[2026-02-28 13:59:53]  *** Listing of results directory ***
[2026-02-28 13:59:53] total 475348
[2026-02-28 13:59:53] -rw-r--r--. 1 boinc boinc      5111 Feb 27 23:54 queuedata.json
[2026-02-28 13:59:53] -rw-r--r--. 1 boinc boinc    584627 Feb 27 23:54 pilot3.tar.gz
[2026-02-28 13:59:53] -rwx------. 1 boinc boinc     36322 Feb 27 23:54 runpilot2-wrapper.sh
[2026-02-28 13:59:53] -rw-r--r--. 1 boinc boinc       100 Feb 28 11:46 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-28 13:59:53] -rwxr-xr-x. 1 boinc boinc      7986 Feb 28 11:46 run_atlas
[2026-02-28 13:59:53] -rw-r--r--. 1 boinc boinc       105 Feb 28 11:46 job.xml
[2026-02-28 13:59:53] -rw-r--r--. 1 boinc boinc      6392 Feb 28 11:46 init_data.xml
[2026-02-28 13:59:53] -rw-r--r--. 2 boinc boinc 272411323 Feb 28 11:46 EVNT.48343789._000017.pool.root.1
[2026-02-28 13:59:53] -rw-r--r--. 2 boinc boinc     15845 Feb 28 11:46 start_atlas.sh
[2026-02-28 13:59:53] drwxrwx--x. 2 boinc boinc        68 Feb 28 11:46 shared
[2026-02-28 13:59:53] -rw-r--r--. 2 boinc boinc    597968 Feb 28 11:46 input.tar.gz
[2026-02-28 13:59:53] -rw-r--r--. 1 boinc boinc         0 Feb 28 11:46 boinc_lockfile
[2026-02-28 13:59:53] -rw-r--r--. 1 boinc boinc      2566 Feb 28 11:46 pandaJob.out
[2026-02-28 13:59:53] -rw-------. 1 boinc boinc    998790 Feb 28 11:47 agis_schedconf.cvmfs.json
[2026-02-28 13:59:53] -rw-------. 1 boinc boinc   1513015 Feb 28 11:47 agis_ddmendpoints.agis.ALL.json
[2026-02-28 13:59:53] -rw-------. 1 boinc boinc       415 Feb 28 11:47 workernode_map.json
[2026-02-28 13:59:53] drwx------. 5 boinc boinc      4096 Feb 28 11:47 pilot3
[2026-02-28 13:59:53] -rw-------. 1 boinc boinc 207493824 Feb 28 13:58 HITS.48838615._002044.pool.root.1
[2026-02-28 13:59:53] -rw-r--r--. 1 boinc boinc       529 Feb 28 13:58 boinc_task_state.xml
[2026-02-28 13:59:53] -rw-------. 1 boinc boinc      1012 Feb 28 13:58 memory_monitor_summary.json
[2026-02-28 13:59:53] -rw-------. 1 boinc boinc    359889 Feb 28 13:58 log.48838615._002044.job.log.tgz.1
[2026-02-28 13:59:53] -rw-------. 1 boinc boinc      6302 Feb 28 13:58 heartbeat.json
[2026-02-28 13:59:53] -rw-------. 1 boinc boinc        95 Feb 28 13:59 pilot_heartbeat.json
[2026-02-28 13:59:53] -rw-r--r--. 1 boinc boinc      8192 Feb 28 13:59 boinc_mmap_file
[2026-02-28 13:59:53] -rw-r--r--. 1 boinc boinc        27 Feb 28 13:59 wrapper_checkpoint.txt
[2026-02-28 13:59:53] -rw-------. 1 boinc boinc      4806 Feb 28 13:59 pilotlog.txt
[2026-02-28 13:59:53] -rw-------. 1 boinc boinc   1110527 Feb 28 13:59 log.48838615._002044.job.log.1
[2026-02-28 13:59:53] -rw-------. 1 boinc boinc       357 Feb 28 13:59 output.list
[2026-02-28 13:59:53] -rw-r--r--. 1 boinc boinc       620 Feb 28 13:59 runtime_log
[2026-02-28 13:59:53] -rw-------. 1 boinc boinc   1484800 Feb 28 13:59 result.tar.gz
[2026-02-28 13:59:53] -rw-r--r--. 1 boinc boinc      8831 Feb 28 13:59 runtime_log.err
[2026-02-28 13:59:53] -rw-------. 1 boinc boinc       652 Feb 28 13:59 ilTLDmQuLG9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmLq5KDmBeeuwn.diag
[2026-02-28 13:59:53] -rw-r--r--. 1 boinc boinc     20954 Feb 28 13:59 stderr.txt
[2026-02-28 13:59:53] HITS file was successfully produced:
[2026-02-28 13:59:53] -rw-------. 1 boinc boinc 207493824 Feb 28 13:58 shared/HITS.pool.root.1
[2026-02-28 13:59:53]  *** Contents of shared directory: ***
[2026-02-28 13:59:53] total 470712
[2026-02-28 13:59:53] -rw-r--r--. 2 boinc boinc 272411323 Feb 28 11:46 ATLAS.root_0
[2026-02-28 13:59:53] -rw-r--r--. 2 boinc boinc     15845 Feb 28 11:46 start_atlas.sh
[2026-02-28 13:59:53] -rw-r--r--. 2 boinc boinc    597968 Feb 28 11:46 input.tar.gz
[2026-02-28 13:59:53] -rw-------. 1 boinc boinc 207493824 Feb 28 13:58 HITS.pool.root.1
[2026-02-28 13:59:53] -rw-------. 1 boinc boinc   1484800 Feb 28 13:59 result.tar.gz
13:59:54 (18297): run_atlas exited; CPU time 59850.351241
13:59:54 (18297): called boinc_finish(0)

</stderr_txt>
]]>

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