Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:12:59 (379): wrapper (7.7.26015): starting
11:12:59 (379): wrapper: running run_atlas (--nthreads 8)
[2026-02-28 11:12:59] Arguments: --nthreads 8
[2026-02-28 11:12:59] Threads: 8
[2026-02-28 11:12:59] Checking for CVMFS
[2026-02-28 11:12:59] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-28 11:14:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-28 11:14:09] Running cvmfs_config stat atlas.cern.ch
[2026-02-28 11:14:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-28 11:14:12] 2.11.2.0 20308 107280 130224 156729 4 1 15302650 25165825 0 130560 124 35096619 99.830 25546657 980 http://s1sampa-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch http://141.99.253.245:3128/ 1
[2026-02-28 11:14:12] CVMFS is ok
[2026-02-28 11:14:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-28 11:14:12] Checking for apptainer binary...
[2026-02-28 11:14:12] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-28 11:14:12] Running /usr/bin/apptainer --version
[2026-02-28 11:14:12] apptainer version 1.3.2-1.el7
[2026-02-28 11:14:12] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-28 11:14:14] cg-vwn476.simple-grid.lan
[2026-02-28 11:14:14] apptainer works
[2026-02-28 11:14:14] Set ATHENA_PROC_NUMBER=8
[2026-02-28 11:14:14] Set ATHENA_CORE_NUMBER=8
[2026-02-28 11:14:14] Starting ATLAS job with PandaID=7032345202
[2026-02-28 11:14:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/11 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-28 13:19:51]  *** The last 200 lines of the pilot log: ***
[2026-02-28 13:19:51] 2026-02-28 12:19:14,090 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-28 13:19:51] 2026-02-28 12:19:14,090 | INFO     | log transfer has been attempted: DONE
[2026-02-28 13:19:51] 2026-02-28 12:19:14,090 | INFO     | job 7032345202 has finished - writing final server update
[2026-02-28 13:19:51] 2026-02-28 12:19:14,091 | INFO     | total number of processed events: 400 (read)
[2026-02-28 13:19:51] 2026-02-28 12:19:14,092 | INFO     | using path: /var/lib/boinc/slots/11/PanDA_Pilot-7032345202/memory_monitor_summary.json (trf name=prmon)
[2026-02-28 13:19:51] 2026-02-28 12:19:14,093 | INFO     | extracted standard info from prmon json
[2026-02-28 13:19:51] 2026-02-28 12:19:14,093 | INFO     | extracted standard memory fields from prmon json
[2026-02-28 13:19:51] 2026-02-28 12:19:14,093 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-28 13:19:51] 2026-02-28 12:19:14,094 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-28 13:19:51] 2026-02-28 12:19:14,094 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-28 13:19:51] 2026-02-28 12:19:14,096 | INFO     | fitting pss+swap vs Time
[2026-02-28 13:19:51] 2026-02-28 12:19:14,097 | INFO     | sum of square deviations: 563026370.5
[2026-02-28 13:19:51] 2026-02-28 12:19:14,097 | INFO     | sum of deviations: -12051731753.000025
[2026-02-28 13:19:51] 2026-02-28 12:19:14,097 | INFO     | mean x: 1772277449.5
[2026-02-28 13:19:51] 2026-02-28 12:19:14,098 | INFO     | mean y: 2607408.229508197
[2026-02-28 13:19:51] 2026-02-28 12:19:14,098 | INFO     | intersect: 37938685596.35595
[2026-02-28 13:19:51] 2026-02-28 12:19:14,098 | INFO     | chi2: 2.556963805991382
[2026-02-28 13:19:51] 2026-02-28 12:19:14,098 | INFO     | sum of square deviations: 496597218.0
[2026-02-28 13:19:51] 2026-02-28 12:19:14,099 | INFO     | sum of deviations: -2266617748.000003
[2026-02-28 13:19:51] 2026-02-28 12:19:14,099 | INFO     | mean x: 1772277297.0
[2026-02-28 13:19:51] 2026-02-28 12:19:14,099 | INFO     | mean y: 2629254.230769231
[2026-02-28 13:19:51] 2026-02-28 12:19:14,099 | INFO     | intersect: 8091831187.209928
[2026-02-28 13:19:51] 2026-02-28 12:19:14,100 | INFO     | chi2: 1.7985686962695107
[2026-02-28 13:19:51] 2026-02-28 12:19:14,100 | INFO     | current chi2=1.7985686962695107 (change=29.65998611105986 %)
[2026-02-28 13:19:51] 2026-02-28 12:19:14,100 | INFO     | sum of square deviations: 435610028.0
[2026-02-28 13:19:51] 2026-02-28 12:19:14,101 | INFO     | sum of deviations: -780444339.4999949
[2026-02-28 13:19:51] 2026-02-28 12:19:14,101 | INFO     | mean x: 1772277144.5
[2026-02-28 13:19:51] 2026-02-28 12:19:14,101 | INFO     | mean y: 2632972.7946428573
[2026-02-28 13:19:51] 2026-02-28 12:19:14,101 | INFO     | intersect: 3177866729.0070677
[2026-02-28 13:19:51] 2026-02-28 12:19:14,101 | INFO     | chi2: 1.8012975347827447
[2026-02-28 13:19:51] 2026-02-28 12:19:14,102 | INFO     | current chi2=1.8012975347827447 (change=-0.15172278483963522 %)
[2026-02-28 13:19:51] 2026-02-28 12:19:14,102 | INFO     | right removable region: 111
[2026-02-28 13:19:51] 2026-02-28 12:19:14,102 | INFO     | sum of square deviations: 496597218.0
[2026-02-28 13:19:51] 2026-02-28 12:19:14,103 | INFO     | sum of deviations: -32256969458.000008
[2026-02-28 13:19:51] 2026-02-28 12:19:14,103 | INFO     | mean x: 1772277602.0
[2026-02-28 13:19:51] 2026-02-28 12:19:14,103 | INFO     | mean y: 2652986.452991453
[2026-02-28 13:19:51] 2026-02-28 12:19:14,103 | INFO     | intersect: 115122718920.47417
[2026-02-28 13:19:51] 2026-02-28 12:19:14,103 | INFO     | chi2: 0.9650288087175832
[2026-02-28 13:19:51] 2026-02-28 12:19:14,103 | INFO     | current chi2=0.9650288087175832 (change=62.25880059559843 %)
[2026-02-28 13:19:51] 2026-02-28 12:19:14,104 | INFO     | sum of square deviations: 435610028.0
[2026-02-28 13:19:51] 2026-02-28 12:19:14,104 | INFO     | sum of deviations: -34137144672.499992
[2026-02-28 13:19:51] 2026-02-28 12:19:14,105 | INFO     | mean x: 1772277754.5
[2026-02-28 13:19:51] 2026-02-28 12:19:14,105 | INFO     | mean y: 2657546.1160714286
[2026-02-28 13:19:51] 2026-02-28 12:19:14,105 | INFO     | intersect: 138889501779.2335
[2026-02-28 13:19:51] 2026-02-28 12:19:14,105 | INFO     | chi2: 0.888977566103961
[2026-02-28 13:19:51] 2026-02-28 12:19:14,106 | INFO     | current chi2=0.888977566103961 (change=7.880722515909758 %)
[2026-02-28 13:19:51] 2026-02-28 12:19:14,106 | INFO     | left removable region: 20
[2026-02-28 13:19:51] 2026-02-28 12:19:14,106 | INFO     | sum of square deviations: 233641590.0
[2026-02-28 13:19:51] 2026-02-28 12:19:14,107 | INFO     | sum of deviations: -18263131478.0
[2026-02-28 13:19:51] 2026-02-28 12:19:14,107 | INFO     | mean x: 1772277724.0
[2026-02-28 13:19:51] 2026-02-28 12:19:14,107 | INFO     | mean y: 2680078.6153846155
[2026-02-28 13:19:51] 2026-02-28 12:19:14,107 | INFO     | intersect: 138536838697.13275
[2026-02-28 13:19:51] 2026-02-28 12:19:14,107 | INFO     | chi2: 0.0750993475098904
[2026-02-28 13:19:51] 2026-02-28 12:19:14,107 | INFO     | current memory leak: -78.17 B/s (using 91 data points, chi2=0.08)
[2026-02-28 13:19:51] 2026-02-28 12:19:14,108 | INFO     | could have reported an average CPU frequency of 2249 MHz (8 samples)
[2026-02-28 13:19:51] 2026-02-28 12:19:14,108 | INFO     | ..............................
[2026-02-28 13:19:51] 2026-02-28 12:19:14,108 | INFO     | . Timing measurements:
[2026-02-28 13:19:51] 2026-02-28 12:19:14,108 | INFO     | . get job = 0 s
[2026-02-28 13:19:51] 2026-02-28 12:19:14,109 | INFO     | . initial setup = 7 s
[2026-02-28 13:19:51] 2026-02-28 12:19:14,109 | INFO     | . payload setup = 7 s
[2026-02-28 13:19:51] 2026-02-28 12:19:14,109 | INFO     | . stage-in = 0 s
[2026-02-28 13:19:51] 2026-02-28 12:19:14,109 | INFO     | . payload execution = 7393 s
[2026-02-28 13:19:51] 2026-02-28 12:19:14,109 | INFO     | . stage-out = 0 s
[2026-02-28 13:19:51] 2026-02-28 12:19:14,109 | INFO     | . log creation = 0 s
[2026-02-28 13:19:51] 2026-02-28 12:19:14,109 | INFO     | ..............................
[2026-02-28 13:19:51] 2026-02-28 12:19:14,206 | INFO     | 
[2026-02-28 13:19:51] 2026-02-28 12:19:14,206 | INFO     | job summary report
[2026-02-28 13:19:51] 2026-02-28 12:19:14,206 | INFO     | --------------------------------------------------
[2026-02-28 13:19:51] 2026-02-28 12:19:14,206 | INFO     | PanDA job id: 7032345202
[2026-02-28 13:19:51] 2026-02-28 12:19:14,207 | INFO     | task id: 48838577
[2026-02-28 13:19:51] 2026-02-28 12:19:14,207 | INFO     | errors: (none)
[2026-02-28 13:19:51] 2026-02-28 12:19:14,207 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-28 13:19:51] 2026-02-28 12:19:14,207 | INFO     | pilot state: finished 
[2026-02-28 13:19:51] 2026-02-28 12:19:14,207 | INFO     | transexitcode: 0
[2026-02-28 13:19:51] 2026-02-28 12:19:14,207 | INFO     | exeerrorcode: 0
[2026-02-28 13:19:51] 2026-02-28 12:19:14,207 | INFO     | exeerrordiag: 
[2026-02-28 13:19:51] 2026-02-28 12:19:14,207 | INFO     | exitcode: 0
[2026-02-28 13:19:51] 2026-02-28 12:19:14,207 | INFO     | exitmsg: OK
[2026-02-28 13:19:51] 2026-02-28 12:19:14,207 | INFO     | cpuconsumptiontime: 54598 s
[2026-02-28 13:19:51] 2026-02-28 12:19:14,208 | INFO     | nevents: 400
[2026-02-28 13:19:51] 2026-02-28 12:19:14,208 | INFO     | neventsw: 0
[2026-02-28 13:19:51] 2026-02-28 12:19:14,208 | INFO     | pid: 8915
[2026-02-28 13:19:51] 2026-02-28 12:19:14,208 | INFO     | pgrp: 8915
[2026-02-28 13:19:51] 2026-02-28 12:19:14,208 | INFO     | corecount: 8
[2026-02-28 13:19:51] 2026-02-28 12:19:14,208 | INFO     | event service: False
[2026-02-28 13:19:51] 2026-02-28 12:19:14,208 | INFO     | sizes: {0: 2282072, 1: 2282278, 11: 2282306, 7405: 2309648, 7406: 2318704, 7409: 2318842}
[2026-02-28 13:19:51] 2026-02-28 12:19:14,208 | INFO     | --------------------------------------------------
[2026-02-28 13:19:51] 2026-02-28 12:19:14,208 | INFO     | 
[2026-02-28 13:19:51] 2026-02-28 12:19:14,208 | INFO     | executing command: ls -lF /var/lib/boinc/slots/11
[2026-02-28 13:19:51] 2026-02-28 12:19:14,232 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-28 13:19:51] 2026-02-28 12:19:14,232 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-28 13:19:51] 2026-02-28 12:19:14,232 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-28 13:19:51] 2026-02-28 12:19:14,232 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-28 13:19:51] 2026-02-28 12:19:14,232 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-28 13:19:51] 2026-02-28 12:19:14,233 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-28 13:19:51] 2026-02-28 12:19:14,233 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-28 13:19:51] 2026-02-28 12:19:14,233 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-28 13:19:51] 2026-02-28 12:19:14,233 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-28 13:19:51] 2026-02-28 12:19:14,233 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-28 13:19:51] 2026-02-28 12:19:14,233 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-28 13:19:51] 2026-02-28 12:19:14,233 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-28 13:19:51] 2026-02-28 12:19:14,233 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-28 13:19:51] 2026-02-28 12:19:14,233 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-28 13:19:51] 2026-02-28 12:19:14,233 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-28 13:19:51] 2026-02-28 12:19:14,234 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-28 13:19:51] 2026-02-28 12:19:14,234 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-28 13:19:51] 2026-02-28 12:19:14,234 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-28 13:19:51] 2026-02-28 12:19:14,234 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-28 13:19:51] 2026-02-28 12:19:14,234 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-28 13:19:51] 2026-02-28 12:19:14,234 | INFO     | job 7032345202 has completed (purged errors)
[2026-02-28 13:19:51] 2026-02-28 12:19:14,234 | INFO     | overall cleanup function is called
[2026-02-28 13:19:51] 2026-02-28 12:19:15,242 | INFO     | --- collectZombieJob: --- 10, [8915]
[2026-02-28 13:19:51] 2026-02-28 12:19:15,243 | INFO     | zombie collector waiting for pid 8915
[2026-02-28 13:19:51] 2026-02-28 12:19:15,243 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-28 13:19:51] 2026-02-28 12:19:15,243 | INFO     | collected zombie processes
[2026-02-28 13:19:51] 2026-02-28 12:19:15,243 | INFO     | will attempt to kill all subprocesses of pid=8915
[2026-02-28 13:19:51] 2026-02-28 12:19:15,295 | INFO     | process IDs to be killed: [8915] (in reverse order)
[2026-02-28 13:19:51] 2026-02-28 12:19:15,335 | WARNING  | found no corresponding commands to process id(s)
[2026-02-28 13:19:51] 2026-02-28 12:19:15,335 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-28 13:19:51] 2026-02-28 12:19:15,337 | INFO     | did not find any defunct processes belonging to 8915
[2026-02-28 13:19:51] 2026-02-28 12:19:15,338 | INFO     | did not find any defunct processes belonging to 8915
[2026-02-28 13:19:51] 2026-02-28 12:19:15,339 | INFO     | ready for new job
[2026-02-28 13:19:51] 2026-02-28 12:19:15,339 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-28 13:19:51] 2026-02-28 12:19:15,340 | INFO     | **************************************
[2026-02-28 13:19:51] 2026-02-28 12:19:15,340 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-28 13:19:51] 2026-02-28 12:19:15,340 | INFO     | **************************************
[2026-02-28 13:19:51] 2026-02-28 12:19:15,341 | INFO     | 
[2026-02-28 13:19:51] 2026-02-28 12:19:15,341 | INFO     | pilot is running in a VM
[2026-02-28 13:19:51] 2026-02-28 12:19:15,341 | INFO     | architecture information:
[2026-02-28 13:19:51] 2026-02-28 12:19:15,342 | INFO     | executing command: cat /etc/os-release
[2026-02-28 13:19:51] 2026-02-28 12:19:15,358 | INFO     | cat /etc/os-release:
[2026-02-28 13:19:51] NAME="CentOS Linux"
[2026-02-28 13:19:51] VERSION="7 (Core)"
[2026-02-28 13:19:51] ID="centos"
[2026-02-28 13:19:51] ID_LIKE="rhel fedora"
[2026-02-28 13:19:51] VERSION_ID="7"
[2026-02-28 13:19:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-28 13:19:51] ANSI_COLOR="0;31"
[2026-02-28 13:19:51] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-28 13:19:51] HOME_URL="https://www.centos.org/"
[2026-02-28 13:19:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-28 13:19:51] 
[2026-02-28 13:19:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-28 13:19:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-28 13:19:51] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-28 13:19:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-28 13:19:51] 
[2026-02-28 13:19:51] 2026-02-28 12:19:15,359 | INFO     | **************************************
[2026-02-28 13:19:51] 2026-02-28 12:19:15,862 | INFO     | executing command: df -mP /var/lib/boinc/slots/11
[2026-02-28 13:19:51] 2026-02-28 12:19:15,881 | INFO     | sufficient remaining disk space (497876467712 B)
[2026-02-28 13:19:51] 2026-02-28 12:19:15,881 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-28 13:19:51] 2026-02-28 12:19:15,881 | INFO     | current server update state: UPDATING_FINAL
[2026-02-28 13:19:51] 2026-02-28 12:19:15,881 | INFO     | update_server=False
[2026-02-28 13:19:51] 2026-02-28 12:19:15,881 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-28 13:19:51] 2026-02-28 12:19:15,882 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-28 13:19:51] 2026-02-28 12:19:16,579 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-28 13:19:51] 2026-02-28 12:19:16,579 | INFO     | aborting loop
[2026-02-28 13:19:51] 2026-02-28 12:19:16,695 | INFO     | all data control threads have been joined
[2026-02-28 13:19:51] 2026-02-28 12:19:16,730 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-28 13:19:51] 2026-02-28 12:19:16,887 | INFO     | [job] retrieve thread has finished
[2026-02-28 13:19:51] 2026-02-28 12:19:16,888 | INFO     | [job] queue monitor thread has finished
[2026-02-28 13:19:51] 2026-02-28 12:19:16,919 | INFO     | [payload] validate_pre thread has finished
[2026-02-28 13:19:51] 2026-02-28 12:19:17,171 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-28 13:19:51] 2026-02-28 12:19:17,290 | INFO     | all payload control threads have been joined
[2026-02-28 13:19:51] 2026-02-28 12:19:17,310 | INFO     | all job control threads have been joined
[2026-02-28 13:19:51] 2026-02-28 12:19:17,332 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-28 13:19:51] 2026-02-28 12:19:17,339 | INFO     | [payload] validate_post thread has finished
[2026-02-28 13:19:51] 2026-02-28 12:19:17,525 | INFO     | [job] validate thread has finished
[2026-02-28 13:19:51] 2026-02-28 12:19:17,585 | INFO     | [job] job monitor thread has finished
[2026-02-28 13:19:51] 2026-02-28 12:19:17,701 | INFO     | [data] control thread has finished
[2026-02-28 13:19:51] 2026-02-28 12:19:18,116 | INFO     | [data] copytool_in thread has finished
[2026-02-28 13:19:51] 2026-02-28 12:19:18,117 | INFO     | [job] create_data_payload thread has finished
[2026-02-28 13:19:51] 2026-02-28 12:19:18,180 | INFO     | [payload] failed_post thread has finished
[2026-02-28 13:19:51] 2026-02-28 12:19:18,296 | INFO     | [payload] control thread has finished
[2026-02-28 13:19:51] 2026-02-28 12:19:18,316 | INFO     | [job] control thread has finished
[2026-02-28 13:19:51] 2026-02-28 12:19:18,342 | INFO     | [payload] execute_payloads thread has finished
[2026-02-28 13:19:51] 2026-02-28 12:19:18,736 | INFO     | [data] copytool_out thread has finished
[2026-02-28 13:19:51] 2026-02-28 12:19:21,339 | INFO     | [data] queue_monitor thread has finished
[2026-02-28 13:19:51] 2026-02-28 12:19:45,023 | INFO     | [monitor] cgroup control has ended
[2026-02-28 13:19:51] 2026-02-28 12:19:45,471 | INFO     | PID=4500 has CPU usage=3.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-02-28 13:19:51] 2026-02-28 12:19:45,472 | INFO     | found 0 job(s) in 20 queues
[2026-02-28 13:19:51] 2026-02-28 12:19:45,472 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-28 13:19:51] 2026-02-28 12:19:45,472 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-28 13:19:51] 2026-02-28 12:19:46,379 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140352938219328)>', '<ExcThread(monitor, started 140352216364800)>']
[2026-02-28 13:19:51] 2026-02-28 12:19:46,477 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-28 13:19:51] 2026-02-28 12:19:46,478 | INFO     | [monitor] control thread has ended
[2026-02-28 13:19:51] 2026-02-28 12:19:51,405 | INFO     | all workflow threads have been joined
[2026-02-28 13:19:51] 2026-02-28 12:19:51,405 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-28 13:19:51] 2026-02-28 12:19:51,406 | INFO     | traces error code: 0
[2026-02-28 13:19:51] 2026-02-28 12:19:51,406 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-28 13:19:51] 2026-02-28 12:19:51,537 [wrapper] ==== pilot stdout END ====
[2026-02-28 13:19:51] 2026-02-28 12:19:51,542 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-28 13:19:51] 2026-02-28 12:19:51,546 [wrapper] pilotpid: 4500
[2026-02-28 13:19:51] 2026-02-28 12:19:51,550 [wrapper] Pilot exit status: 0
[2026-02-28 13:19:51] 2026-02-28 12:19:51,564 [wrapper] pandaids: 7032345202
[2026-02-28 13:19:51] 2026-02-28 12:19:51,590 [wrapper] cleanup supervisor_pilot 14172 4501
[2026-02-28 13:19:51] 2026-02-28 12:19:51,595 [wrapper] Test setup, not cleaning
[2026-02-28 13:19:51] 2026-02-28 12:19:51,604 [wrapper] apfmon messages muted
[2026-02-28 13:19:51] 2026-02-28 12:19:51,607 [wrapper] ==== wrapper stdout END ====
[2026-02-28 13:19:51] 2026-02-28 12:19:51,610 [wrapper] ==== wrapper stderr END ====
[2026-02-28 13:19:51]  *** Error codes and diagnostics ***
[2026-02-28 13:19:51]     "exeErrorCode": 0,
[2026-02-28 13:19:51]     "exeErrorDiag": "",
[2026-02-28 13:19:51]     "pilotErrorCode": 0,
[2026-02-28 13:19:51]     "pilotErrorDiag": "",
[2026-02-28 13:19:51]  *** Listing of results directory ***
[2026-02-28 13:19:51] total 511004
[2026-02-28 13:19:51] -rw-r--r--. 1 boinc boinc    584627 Feb 28 01:57 pilot3.tar.gz
[2026-02-28 13:19:51] -rwx------. 1 boinc boinc     36322 Feb 28 01:57 runpilot2-wrapper.sh
[2026-02-28 13:19:51] -rw-r--r--. 1 boinc boinc      5111 Feb 28 01:58 queuedata.json
[2026-02-28 13:19:51] -rw-r--r--. 1 boinc boinc       100 Feb 28 11:12 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-28 13:19:51] -rwxr-xr-x. 1 boinc boinc      7986 Feb 28 11:12 run_atlas
[2026-02-28 13:19:51] -rw-r--r--. 1 boinc boinc       105 Feb 28 11:12 job.xml
[2026-02-28 13:19:51] -rw-r--r--. 1 boinc boinc      6392 Feb 28 11:12 init_data.xml
[2026-02-28 13:19:51] -rw-r--r--. 2 boinc boinc 291822420 Feb 28 11:12 EVNT.48220197._000079.pool.root.1
[2026-02-28 13:19:51] -rw-r--r--. 2 boinc boinc     15845 Feb 28 11:12 start_atlas.sh
[2026-02-28 13:19:51] drwxrwx--x. 2 boinc boinc        68 Feb 28 11:12 shared
[2026-02-28 13:19:51] -rw-r--r--. 2 boinc boinc    597969 Feb 28 11:12 input.tar.gz
[2026-02-28 13:19:51] -rw-r--r--. 1 boinc boinc         0 Feb 28 11:12 boinc_lockfile
[2026-02-28 13:19:51] -rw-r--r--. 1 boinc boinc      2566 Feb 28 11:14 pandaJob.out
[2026-02-28 13:19:51] -rw-------. 1 boinc boinc    998790 Feb 28 11:15 agis_schedconf.cvmfs.json
[2026-02-28 13:19:51] -rw-------. 1 boinc boinc   1513015 Feb 28 11:15 agis_ddmendpoints.agis.ALL.json
[2026-02-28 13:19:51] -rw-------. 1 boinc boinc       415 Feb 28 11:15 workernode_map.json
[2026-02-28 13:19:51] drwx------. 5 boinc boinc      4096 Feb 28 11:15 pilot3
[2026-02-28 13:19:51] -rw-------. 1 boinc boinc 224681171 Feb 28 13:18 HITS.48838577._001991.pool.root.1
[2026-02-28 13:19:51] -rw-r--r--. 1 boinc boinc       529 Feb 28 13:18 boinc_task_state.xml
[2026-02-28 13:19:51] -rw-------. 1 boinc boinc        95 Feb 28 13:18 pilot_heartbeat.json
[2026-02-28 13:19:51] -rw-------. 1 boinc boinc      1013 Feb 28 13:19 memory_monitor_summary.json
[2026-02-28 13:19:51] -rw-------. 1 boinc boinc    373369 Feb 28 13:19 log.48838577._001991.job.log.tgz.1
[2026-02-28 13:19:51] -rw-------. 1 boinc boinc      6312 Feb 28 13:19 heartbeat.json
[2026-02-28 13:19:51] -rw-r--r--. 1 boinc boinc      8192 Feb 28 13:19 boinc_mmap_file
[2026-02-28 13:19:51] -rw-r--r--. 1 boinc boinc        27 Feb 28 13:19 wrapper_checkpoint.txt
[2026-02-28 13:19:51] -rw-------. 1 boinc boinc      4805 Feb 28 13:19 pilotlog.txt
[2026-02-28 13:19:51] -rw-------. 1 boinc boinc   1049457 Feb 28 13:19 log.48838577._001991.job.log.1
[2026-02-28 13:19:51] -rw-------. 1 boinc boinc       357 Feb 28 13:19 output.list
[2026-02-28 13:19:51] -rw-r--r--. 1 boinc boinc       620 Feb 28 13:19 runtime_log
[2026-02-28 13:19:51] -rw-------. 1 boinc boinc   1443840 Feb 28 13:19 result.tar.gz
[2026-02-28 13:19:51] -rw-r--r--. 1 boinc boinc      8831 Feb 28 13:19 runtime_log.err
[2026-02-28 13:19:51] -rw-------. 1 boinc boinc       652 Feb 28 13:19 9TqLDmkpNG9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDm945KDmIhweBo.diag
[2026-02-28 13:19:51] -rw-r--r--. 1 boinc boinc     20706 Feb 28 13:19 stderr.txt
[2026-02-28 13:19:51] HITS file was successfully produced:
[2026-02-28 13:19:51] -rw-------. 1 boinc boinc 224681171 Feb 28 13:18 shared/HITS.pool.root.1
[2026-02-28 13:19:51]  *** Contents of shared directory: ***
[2026-02-28 13:19:51] total 506412
[2026-02-28 13:19:51] -rw-r--r--. 2 boinc boinc 291822420 Feb 28 11:12 ATLAS.root_0
[2026-02-28 13:19:51] -rw-r--r--. 2 boinc boinc     15845 Feb 28 11:12 start_atlas.sh
[2026-02-28 13:19:51] -rw-r--r--. 2 boinc boinc    597969 Feb 28 11:12 input.tar.gz
[2026-02-28 13:19:51] -rw-------. 1 boinc boinc 224681171 Feb 28 13:18 HITS.pool.root.1
[2026-02-28 13:19:51] -rw-------. 1 boinc boinc   1443840 Feb 28 13:19 result.tar.gz
13:19:53 (379): run_atlas exited; CPU time 54630.716793
13:19:53 (379): called boinc_finish(0)

</stderr_txt>
]]>

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