Stderr output

<core_client_version>7.4.25</core_client_version>
<![CDATA[
<stderr_txt>
05:08:20 (4517): wrapper (7.7.26015): starting
05:08:20 (4517): wrapper: running run_atlas (--nthreads 4)
[2026-02-28 05:08:20] Arguments: --nthreads 4
[2026-02-28 05:08:20] Threads: 4
[2026-02-28 05:08:20] Checking for CVMFS
[2026-02-28 05:08:42] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-28 05:08:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-28 05:08:48] Running cvmfs_config stat atlas.cern.ch
[2026-02-28 05:08:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-28 05:08:48] 2.11.5.0 4752 0 25180 156721 3 1 3561942 4194304 0 130560 0 0 0.000 1336 4453 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.100.152:3128 1
[2026-02-28 05:08:48] CVMFS is ok
[2026-02-28 05:08:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-28 05:08:48] Checking for apptainer binary...
[2026-02-28 05:08:48] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-28 05:08:48] Running /usr/bin/apptainer --version
[2026-02-28 05:08:49] apptainer version 1.0.3
[2026-02-28 05:08:49] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-28 05:08:50] TeeC23
[2026-02-28 05:08:50] apptainer works
[2026-02-28 05:08:50] Set ATHENA_PROC_NUMBER=4
[2026-02-28 05:08:50] Set ATHENA_CORE_NUMBER=4
[2026-02-28 05:08:50] Starting ATLAS job with PandaID=7032233524
[2026-02-28 05:08:50] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/m/BOINC/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-28 07:29:47]  *** The last 200 lines of the pilot log: ***
[2026-02-28 07:29:47] 2026-02-28 07:28:48,366 | INFO     | added worker_node to metadata from /home/m/BOINC/slots/2/workernode_map.json
[2026-02-28 07:29:47] 2026-02-28 07:28:48,367 | INFO     | this job has now completed (state=finished)
[2026-02-28 07:29:47] 2026-02-28 07:28:48,367 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-28 07:29:47] 2026-02-28 07:28:48,368 | INFO     | log transfer has been attempted: DONE
[2026-02-28 07:29:47] 2026-02-28 07:28:48,368 | INFO     | job 7032233524 has finished - writing final server update
[2026-02-28 07:29:47] 2026-02-28 07:28:48,368 | INFO     | total number of processed events: 400 (read)
[2026-02-28 07:29:47] 2026-02-28 07:28:48,388 | INFO     | using path: /home/m/BOINC/slots/2/PanDA_Pilot-7032233524/memory_monitor_summary.json (trf name=prmon)
[2026-02-28 07:29:47] 2026-02-28 07:28:48,388 | INFO     | extracted standard info from prmon json
[2026-02-28 07:29:47] 2026-02-28 07:28:48,389 | INFO     | extracted standard memory fields from prmon json
[2026-02-28 07:29:47] 2026-02-28 07:28:48,389 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-28 07:29:47] 2026-02-28 07:28:48,389 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-28 07:29:47] 2026-02-28 07:28:48,389 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-28 07:29:47] 2026-02-28 07:28:48,392 | INFO     | fitting pss+swap vs Time
[2026-02-28 07:29:47] 2026-02-28 07:28:48,392 | INFO     | sum of square deviations: 797291228.0
[2026-02-28 07:29:47] 2026-02-28 07:28:48,393 | INFO     | sum of deviations: 3836889812.999999
[2026-02-28 07:29:47] 2026-02-28 07:28:48,393 | INFO     | mean x: 1772259535.0
[2026-02-28 07:29:47] 2026-02-28 07:28:48,393 | INFO     | mean y: 2355735.416058394
[2026-02-28 07:29:47] 2026-02-28 07:28:48,393 | INFO     | intersect: -8526478292.886601
[2026-02-28 07:29:47] 2026-02-28 07:28:48,394 | INFO     | chi2: 1.311329383361244
[2026-02-28 07:29:47] 2026-02-28 07:28:48,394 | INFO     | sum of square deviations: 713140813.0
[2026-02-28 07:29:47] 2026-02-28 07:28:48,395 | INFO     | sum of deviations: 4127033354.4999986
[2026-02-28 07:29:47] 2026-02-28 07:28:48,395 | INFO     | mean x: 1772259382.5
[2026-02-28 07:29:47] 2026-02-28 07:28:48,395 | INFO     | mean y: 2356261.3863636362
[2026-02-28 07:29:47] 2026-02-28 07:28:48,395 | INFO     | intersect: -10253926160.081318
[2026-02-28 07:29:47] 2026-02-28 07:28:48,395 | INFO     | chi2: 1.3128628543789056
[2026-02-28 07:29:47] 2026-02-28 07:28:48,395 | INFO     | current chi2=1.3128628543789056 (change=-0.11694018582355734 %)
[2026-02-28 07:29:47] 2026-02-28 07:28:48,395 | INFO     | right removable region: 131
[2026-02-28 07:29:47] 2026-02-28 07:28:48,396 | INFO     | sum of square deviations: 713140813.0
[2026-02-28 07:29:47] 2026-02-28 07:28:48,396 | INFO     | sum of deviations: -11982841982.499998
[2026-02-28 07:29:47] 2026-02-28 07:28:48,396 | INFO     | mean x: 1772259687.5
[2026-02-28 07:29:47] 2026-02-28 07:28:48,397 | INFO     | mean y: 2383796.9015151514
[2026-02-28 07:29:47] 2026-02-28 07:28:48,397 | INFO     | intersect: 29781506517.32185
[2026-02-28 07:29:47] 2026-02-28 07:28:48,397 | INFO     | chi2: 0.02120940132820841
[2026-02-28 07:29:47] 2026-02-28 07:28:48,397 | INFO     | current chi2=0.02120940132820841 (change=98.38260305935921 %)
[2026-02-28 07:29:47] 2026-02-28 07:28:48,397 | INFO     | sum of square deviations: 635130048.0
[2026-02-28 07:29:47] 2026-02-28 07:28:48,398 | INFO     | sum of deviations: -11441597491.999998
[2026-02-28 07:29:47] 2026-02-28 07:28:48,398 | INFO     | mean x: 1772259840.0
[2026-02-28 07:29:47] 2026-02-28 07:28:48,398 | INFO     | mean y: 2382733.622047244
[2026-02-28 07:29:47] 2026-02-28 07:28:48,398 | INFO     | intersect: 31928889445.70303
[2026-02-28 07:29:47] 2026-02-28 07:28:48,398 | INFO     | chi2: 0.019742605526532557
[2026-02-28 07:29:47] 2026-02-28 07:28:48,399 | INFO     | current chi2=0.019742605526532557 (change=6.915781256517703 %)
[2026-02-28 07:29:47] 2026-02-28 07:28:48,399 | INFO     | left removable region: 20
[2026-02-28 07:29:47] 2026-02-28 07:28:48,399 | INFO     | sum of square deviations: 424045160.0
[2026-02-28 07:29:47] 2026-02-28 07:28:48,399 | INFO     | sum of deviations: -8818067402.0
[2026-02-28 07:29:47] 2026-02-28 07:28:48,399 | INFO     | mean x: 1772259962.0
[2026-02-28 07:29:47] 2026-02-28 07:28:48,399 | INFO     | mean y: 2380655.621621622
[2026-02-28 07:29:47] 2026-02-28 07:28:48,399 | INFO     | intersect: 36856728430.2359
[2026-02-28 07:29:47] 2026-02-28 07:28:48,399 | INFO     | chi2: 0.017929453262266068
[2026-02-28 07:29:47] 2026-02-28 07:28:48,399 | INFO     | current memory leak: -20.80 B/s (using 111 data points, chi2=0.02)
[2026-02-28 07:29:47] 2026-02-28 07:28:48,400 | INFO     | could have reported an average CPU frequency of 3366 MHz (8 samples)
[2026-02-28 07:29:47] 2026-02-28 07:28:48,400 | INFO     | ..............................
[2026-02-28 07:29:47] 2026-02-28 07:28:48,400 | INFO     | . Timing measurements:
[2026-02-28 07:29:47] 2026-02-28 07:28:48,400 | INFO     | . get job = 0 s
[2026-02-28 07:29:47] 2026-02-28 07:28:48,400 | INFO     | . initial setup = 4 s
[2026-02-28 07:29:47] 2026-02-28 07:28:48,400 | INFO     | . payload setup = 4 s
[2026-02-28 07:29:47] 2026-02-28 07:28:48,400 | INFO     | . stage-in = 0 s
[2026-02-28 07:29:47] 2026-02-28 07:28:48,400 | INFO     | . payload execution = 8339 s
[2026-02-28 07:29:47] 2026-02-28 07:28:48,400 | INFO     | . stage-out = 0 s
[2026-02-28 07:29:47] 2026-02-28 07:28:48,400 | INFO     | . log creation = 0 s
[2026-02-28 07:29:47] 2026-02-28 07:28:48,400 | INFO     | ..............................
[2026-02-28 07:29:47] 2026-02-28 07:28:48,438 | INFO     | 
[2026-02-28 07:29:47] 2026-02-28 07:28:48,438 | INFO     | job summary report
[2026-02-28 07:29:47] 2026-02-28 07:28:48,438 | INFO     | --------------------------------------------------
[2026-02-28 07:29:47] 2026-02-28 07:28:48,438 | INFO     | PanDA job id: 7032233524
[2026-02-28 07:29:47] 2026-02-28 07:28:48,438 | INFO     | task id: 48700922
[2026-02-28 07:29:47] 2026-02-28 07:28:48,438 | INFO     | errors: (none)
[2026-02-28 07:29:47] 2026-02-28 07:28:48,438 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-28 07:29:47] 2026-02-28 07:28:48,438 | INFO     | pilot state: finished 
[2026-02-28 07:29:47] 2026-02-28 07:28:48,438 | INFO     | transexitcode: 0
[2026-02-28 07:29:47] 2026-02-28 07:28:48,438 | INFO     | exeerrorcode: 0
[2026-02-28 07:29:47] 2026-02-28 07:28:48,438 | INFO     | exeerrordiag: 
[2026-02-28 07:29:47] 2026-02-28 07:28:48,438 | INFO     | exitcode: 0
[2026-02-28 07:29:47] 2026-02-28 07:28:48,438 | INFO     | exitmsg: OK
[2026-02-28 07:29:47] 2026-02-28 07:28:48,438 | INFO     | cpuconsumptiontime: 32229 s
[2026-02-28 07:29:47] 2026-02-28 07:28:48,438 | INFO     | nevents: 400
[2026-02-28 07:29:47] 2026-02-28 07:28:48,438 | INFO     | neventsw: 0
[2026-02-28 07:29:47] 2026-02-28 07:28:48,439 | INFO     | pid: 13218
[2026-02-28 07:29:47] 2026-02-28 07:28:48,439 | INFO     | pgrp: 13218
[2026-02-28 07:29:47] 2026-02-28 07:28:48,439 | INFO     | corecount: 4
[2026-02-28 07:29:47] 2026-02-28 07:28:48,439 | INFO     | event service: False
[2026-02-28 07:29:47] 2026-02-28 07:28:48,439 | INFO     | sizes: {0: 2282206, 11: 2282206, 8347: 2310069, 8348: 2319259}
[2026-02-28 07:29:47] 2026-02-28 07:28:48,439 | INFO     | --------------------------------------------------
[2026-02-28 07:29:47] 2026-02-28 07:28:48,439 | INFO     | 
[2026-02-28 07:29:47] 2026-02-28 07:28:48,439 | INFO     | executing command: ls -lF /home/m/BOINC/slots/2
[2026-02-28 07:29:47] 2026-02-28 07:28:48,446 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-28 07:29:47] 2026-02-28 07:28:48,446 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-28 07:29:47] 2026-02-28 07:28:48,446 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-28 07:29:47] 2026-02-28 07:28:48,446 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-28 07:29:47] 2026-02-28 07:28:48,446 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-28 07:29:47] 2026-02-28 07:28:48,446 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-28 07:29:47] 2026-02-28 07:28:48,446 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-28 07:29:47] 2026-02-28 07:28:48,446 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-28 07:29:47] 2026-02-28 07:28:48,446 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-28 07:29:47] 2026-02-28 07:28:48,446 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-28 07:29:47] 2026-02-28 07:28:48,447 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-28 07:29:47] 2026-02-28 07:28:48,447 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-28 07:29:47] 2026-02-28 07:28:48,447 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-28 07:29:47] 2026-02-28 07:28:48,447 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-28 07:29:47] 2026-02-28 07:28:48,447 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-28 07:29:47] 2026-02-28 07:28:48,447 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-28 07:29:47] 2026-02-28 07:28:48,447 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-28 07:29:47] 2026-02-28 07:28:48,447 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-28 07:29:47] 2026-02-28 07:28:48,447 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-28 07:29:47] 2026-02-28 07:28:48,447 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-28 07:29:47] 2026-02-28 07:28:48,447 | INFO     | job 7032233524 has completed (purged errors)
[2026-02-28 07:29:47] 2026-02-28 07:28:48,447 | INFO     | overall cleanup function is called
[2026-02-28 07:29:47] 2026-02-28 07:28:48,743 | WARNING  | process 13218 can no longer be monitored (due to stat problems) - aborting
[2026-02-28 07:29:47] 2026-02-28 07:28:48,770 | INFO     | using path: /home/m/BOINC/slots/2/memory_monitor_summary.json (trf name=prmon)
[2026-02-28 07:29:47] 2026-02-28 07:28:48,810 | INFO     | number of running child processes to parent process 13218: 1
[2026-02-28 07:29:47] 2026-02-28 07:28:48,810 | INFO     | maximum number of monitored processes: 6
[2026-02-28 07:29:47] 2026-02-28 07:28:48,810 | INFO     | aborting job monitoring since job object (job id=7032233524) has expired
[2026-02-28 07:29:47] 2026-02-28 07:28:49,454 | INFO     | --- collectZombieJob: --- 10, [13218]
[2026-02-28 07:29:47] 2026-02-28 07:28:49,454 | INFO     | zombie collector waiting for pid 13218
[2026-02-28 07:29:47] 2026-02-28 07:28:49,454 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-28 07:29:47] 2026-02-28 07:28:49,454 | INFO     | collected zombie processes
[2026-02-28 07:29:47] 2026-02-28 07:28:49,454 | INFO     | will attempt to kill all subprocesses of pid=13218
[2026-02-28 07:29:47] 2026-02-28 07:28:49,499 | INFO     | process IDs to be killed: [13218] (in reverse order)
[2026-02-28 07:29:47] 2026-02-28 07:28:49,519 | WARNING  | found no corresponding commands to process id(s)
[2026-02-28 07:29:47] 2026-02-28 07:28:49,519 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-28 07:29:47] 2026-02-28 07:28:49,520 | INFO     | did not find any defunct processes belonging to 13218
[2026-02-28 07:29:47] 2026-02-28 07:28:49,521 | INFO     | did not find any defunct processes belonging to 13218
[2026-02-28 07:29:47] 2026-02-28 07:28:49,521 | INFO     | ready for new job
[2026-02-28 07:29:47] 2026-02-28 07:28:49,522 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-28 07:29:47] 2026-02-28 07:28:49,522 | INFO     | **************************************
[2026-02-28 07:29:47] 2026-02-28 07:28:49,522 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-28 07:29:47] 2026-02-28 07:28:49,522 | INFO     | **************************************
[2026-02-28 07:29:47] 2026-02-28 07:28:49,522 | INFO     | 
[2026-02-28 07:29:47] 2026-02-28 07:28:49,539 | INFO     | architecture information:
[2026-02-28 07:29:47] 2026-02-28 07:28:49,539 | INFO     | executing command: cat /etc/os-release
[2026-02-28 07:29:47] 2026-02-28 07:28:49,548 | INFO     | cat /etc/os-release:
[2026-02-28 07:29:47] NAME="CentOS Linux"
[2026-02-28 07:29:47] VERSION="7 (Core)"
[2026-02-28 07:29:47] ID="centos"
[2026-02-28 07:29:47] ID_LIKE="rhel fedora"
[2026-02-28 07:29:47] VERSION_ID="7"
[2026-02-28 07:29:47] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-28 07:29:47] ANSI_COLOR="0;31"
[2026-02-28 07:29:47] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-28 07:29:47] HOME_URL="https://www.centos.org/"
[2026-02-28 07:29:47] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-28 07:29:47] 
[2026-02-28 07:29:47] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-28 07:29:47] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-28 07:29:47] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-28 07:29:47] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-28 07:29:47] 
[2026-02-28 07:29:47] 2026-02-28 07:28:49,549 | INFO     | **************************************
[2026-02-28 07:29:47] 2026-02-28 07:28:50,052 | INFO     | executing command: df -mP /home/m/BOINC/slots/2
[2026-02-28 07:29:47] 2026-02-28 07:28:50,062 | INFO     | sufficient remaining disk space (413255335936 B)
[2026-02-28 07:29:47] 2026-02-28 07:28:50,062 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-28 07:29:47] 2026-02-28 07:28:50,062 | INFO     | current server update state: UPDATING_FINAL
[2026-02-28 07:29:47] 2026-02-28 07:28:50,062 | INFO     | update_server=False
[2026-02-28 07:29:47] 2026-02-28 07:28:50,062 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-28 07:29:47] 2026-02-28 07:28:50,063 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-28 07:29:47] 2026-02-28 07:28:50,063 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-28 07:29:47] 2026-02-28 07:28:50,063 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-28 07:29:47] 2026-02-28 07:28:50,063 | INFO     | aborting loop
[2026-02-28 07:29:47] 2026-02-28 07:28:50,768 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-28 07:29:47] 2026-02-28 07:28:51,032 | INFO     | all data control threads have been joined
[2026-02-28 07:29:47] 2026-02-28 07:28:51,064 | INFO     | [job] job monitor thread has finished
[2026-02-28 07:29:47] 2026-02-28 07:28:51,067 | INFO     | [job] validate thread has finished
[2026-02-28 07:29:47] 2026-02-28 07:28:51,068 | INFO     | [job] retrieve thread has finished
[2026-02-28 07:29:47] 2026-02-28 07:28:51,068 | INFO     | [job] queue monitor thread has finished
[2026-02-28 07:29:47] 2026-02-28 07:28:51,075 | INFO     | [payload] validate_pre thread has finished
[2026-02-28 07:29:47] 2026-02-28 07:28:51,358 | INFO     | [payload] execute_payloads thread has finished
[2026-02-28 07:29:47] 2026-02-28 07:28:51,407 | INFO     | [job] create_data_payload thread has finished
[2026-02-28 07:29:47] 2026-02-28 07:28:51,411 | INFO     | all payload control threads have been joined
[2026-02-28 07:29:47] 2026-02-28 07:28:51,580 | INFO     | [data] copytool_in thread has finished
[2026-02-28 07:29:47] 2026-02-28 07:28:51,593 | INFO     | [payload] validate_post thread has finished
[2026-02-28 07:29:47] 2026-02-28 07:28:51,602 | INFO     | all job control threads have been joined
[2026-02-28 07:29:47] 2026-02-28 07:28:51,996 | INFO     | [payload] failed_post thread has finished
[2026-02-28 07:29:47] 2026-02-28 07:28:52,037 | INFO     | [data] control thread has finished
[2026-02-28 07:29:47] 2026-02-28 07:28:52,416 | INFO     | [payload] control thread has finished
[2026-02-28 07:29:47] 2026-02-28 07:28:52,608 | INFO     | [job] control thread has finished
[2026-02-28 07:29:47] 2026-02-28 07:28:52,773 | INFO     | [data] copytool_out thread has finished
[2026-02-28 07:29:47] 2026-02-28 07:28:54,068 | INFO     | [data] queue_monitor thread has finished
[2026-02-28 07:29:47] 2026-02-28 07:29:00,870 | INFO     | job.realtimelogging is not enabled
[2026-02-28 07:29:47] 2026-02-28 07:29:01,874 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-28 07:29:47] 2026-02-28 07:29:20,718 | INFO     | PID=8841 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-02-28 07:29:47] 2026-02-28 07:29:20,719 | INFO     | found 0 job(s) in 20 queues
[2026-02-28 07:29:47] 2026-02-28 07:29:20,719 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-28 07:29:47] 2026-02-28 07:29:20,719 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-28 07:29:47] 2026-02-28 07:29:42,321 | INFO     | [monitor] cgroup control has ended
[2026-02-28 07:29:47] 2026-02-28 07:29:42,338 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140149198034752)>', '<ExcThread(monitor, started 140148389959424)>']
[2026-02-28 07:29:47] 2026-02-28 07:29:42,825 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-28 07:29:47] 2026-02-28 07:29:42,825 | INFO     | [monitor] control thread has ended
[2026-02-28 07:29:47] 2026-02-28 07:29:47,364 | INFO     | all workflow threads have been joined
[2026-02-28 07:29:47] 2026-02-28 07:29:47,364 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-28 07:29:47] 2026-02-28 07:29:47,365 | INFO     | traces error code: 0
[2026-02-28 07:29:47] 2026-02-28 07:29:47,365 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-28 07:29:47] 2026-02-28 07:29:47,452 [wrapper] ==== pilot stdout END ====
[2026-02-28 07:29:47] 2026-02-28 07:29:47,453 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-28 07:29:47] 2026-02-28 07:29:47,454 [wrapper] pilotpid: 8841
[2026-02-28 07:29:47] 2026-02-28 07:29:47,455 [wrapper] Pilot exit status: 0
[2026-02-28 07:29:47] 2026-02-28 07:29:47,470 [wrapper] pandaids: 7032233524
[2026-02-28 07:29:47] 2026-02-28 07:29:47,480 [wrapper] cleanup supervisor_pilot 18551 8842
[2026-02-28 07:29:47] 2026-02-28 07:29:47,482 [wrapper] Test setup, not cleaning
[2026-02-28 07:29:47] 2026-02-28 07:29:47,484 [wrapper] apfmon messages muted
[2026-02-28 07:29:47] 2026-02-28 07:29:47,485 [wrapper] ==== wrapper stdout END ====
[2026-02-28 07:29:47] 2026-02-28 07:29:47,486 [wrapper] ==== wrapper stderr END ====
[2026-02-28 07:29:47]  *** Error codes and diagnostics ***
[2026-02-28 07:29:47]     "exeErrorCode": 0,
[2026-02-28 07:29:47]     "exeErrorDiag": "",
[2026-02-28 07:29:47]     "pilotErrorCode": 0,
[2026-02-28 07:29:47]     "pilotErrorDiag": "",
[2026-02-28 07:29:47]  *** Listing of results directory ***
[2026-02-28 07:29:47] total 335328
[2026-02-28 07:29:47] -rw-r--r-- 1 m m    584627 Feb 27 22:54 pilot3.tar.gz
[2026-02-28 07:29:47] -rw-r--r-- 1 m m      5111 Feb 27 22:55 queuedata.json
[2026-02-28 07:29:47] -rwx------ 1 m m     36322 Feb 27 22:55 runpilot2-wrapper.sh
[2026-02-28 07:29:47] -rw-rw-r-- 1 m m       100 Feb 28 05:08 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-28 07:29:47] -rwxr-xr-x 1 m m      7986 Feb 28 05:08 run_atlas
[2026-02-28 07:29:47] -rw-rw-r-- 1 m m       105 Feb 28 05:08 job.xml
[2026-02-28 07:29:47] -rw-r--r-- 2 m m     15845 Feb 28 05:08 start_atlas.sh
[2026-02-28 07:29:47] drwxrwx--x 2 m m      4096 Feb 28 05:08 shared
[2026-02-28 07:29:47] -rw-r--r-- 2 m m    597931 Feb 28 05:08 input.tar.gz
[2026-02-28 07:29:47] -rw-rw-r-- 1 m m      5876 Feb 28 05:08 init_data.xml
[2026-02-28 07:29:47] -rw-r--r-- 2 m m 186687500 Feb 28 05:08 EVNT.48700920._000022.pool.root.1
[2026-02-28 07:29:47] -rw-rw-r-- 1 m m         0 Feb 28 05:08 boinc_lockfile
[2026-02-28 07:29:47] -rw-rw-r-- 1 m m      2514 Feb 28 05:08 pandaJob.out
[2026-02-28 07:29:47] -rw------- 1 m m    998782 Feb 28 05:09 agis_schedconf.cvmfs.json
[2026-02-28 07:29:47] -rw------- 1 m m   1513015 Feb 28 05:09 agis_ddmendpoints.agis.ALL.json
[2026-02-28 07:29:47] -rw------- 1 m m       415 Feb 28 05:09 workernode_map.json
[2026-02-28 07:29:47] drwx------ 5 m m      4096 Feb 28 05:09 pilot3
[2026-02-28 07:29:47] -rw------- 1 m m 149766377 Feb 28 07:28 HITS.48700922._000657.pool.root.1
[2026-02-28 07:29:47] -rw-rw-r-- 1 m m       529 Feb 28 07:28 boinc_task_state.xml
[2026-02-28 07:29:47] -rw------- 1 m m      1027 Feb 28 07:28 memory_monitor_summary.json
[2026-02-28 07:29:47] -rw------- 1 m m    308142 Feb 28 07:28 log.48700922._000657.job.log.tgz.1
[2026-02-28 07:29:47] -rw------- 1 m m      6322 Feb 28 07:28 heartbeat.json
[2026-02-28 07:29:47] -rw------- 1 m m        95 Feb 28 07:29 pilot_heartbeat.json
[2026-02-28 07:29:47] -rw-rw-r-- 1 m m      8192 Feb 28 07:29 boinc_mmap_file
[2026-02-28 07:29:47] -rw-rw-r-- 1 m m        27 Feb 28 07:29 wrapper_checkpoint.txt
[2026-02-28 07:29:47] -rw------- 1 m m      4813 Feb 28 07:29 pilotlog.txt
[2026-02-28 07:29:47] -rw------- 1 m m   1187403 Feb 28 07:29 log.48700922._000657.job.log.1
[2026-02-28 07:29:47] -rw------- 1 m m       357 Feb 28 07:29 output.list
[2026-02-28 07:29:47] -rw-rw-r-- 1 m m       620 Feb 28 07:29 runtime_log
[2026-02-28 07:29:47] -rw------- 1 m m   1515520 Feb 28 07:29 result.tar.gz
[2026-02-28 07:29:47] -rw-rw-r-- 1 m m      8728 Feb 28 07:29 runtime_log.err
[2026-02-28 07:29:47] -rw------- 1 m m       642 Feb 28 07:29 NarNDmhvLG9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmNt5KDmA5KAMm.diag
[2026-02-28 07:29:47] -rw-rw-r-- 1 m m     20855 Feb 28 07:29 stderr.txt
[2026-02-28 07:29:47] HITS file was successfully produced:
[2026-02-28 07:29:47] -rw------- 1 m m 149766377 Feb 28 07:28 shared/HITS.pool.root.1
[2026-02-28 07:29:47]  *** Contents of shared directory: ***
[2026-02-28 07:29:47] total 330660
[2026-02-28 07:29:47] -rw-r--r-- 2 m m     15845 Feb 28 05:08 start_atlas.sh
[2026-02-28 07:29:47] -rw-r--r-- 2 m m    597931 Feb 28 05:08 input.tar.gz
[2026-02-28 07:29:47] -rw-r--r-- 2 m m 186687500 Feb 28 05:08 ATLAS.root_0
[2026-02-28 07:29:47] -rw------- 1 m m 149766377 Feb 28 07:28 HITS.pool.root.1
[2026-02-28 07:29:47] -rw------- 1 m m   1515520 Feb 28 07:29 result.tar.gz
07:29:49 (4517): run_atlas exited; CPU time 32320.474754
07:29:49 (4517): called boinc_finish(0)

</stderr_txt>
]]>

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