Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:19:42 (2439264): wrapper (7.7.26015): starting
11:19:42 (2439264): wrapper: running run_atlas (--nthreads 4)
[2026-02-28 11:19:42] Arguments: --nthreads 4
[2026-02-28 11:19:42] Threads: 4
[2026-02-28 11:19:42] Checking for CVMFS
[2026-02-28 11:19:42] No cvmfs_config command found, will try listing directly
[2026-02-28 11:19:42] CVMFS is ok
[2026-02-28 11:19:42] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-28 11:19:42] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-28 11:19:42] Further information can be found at the LHC@home message board.
[2026-02-28 11:19:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-28 11:19:42] Checking for apptainer binary...
[2026-02-28 11:19:42] which: no apptainer in ((null))
[2026-02-28 11:19:42] apptainer is not installed, using version from CVMFS
[2026-02-28 11:19:42] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-28 11:19:42] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot76/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut15.grid.cesnet.cz
[2026-02-28 11:19:42] apptainer works
[2026-02-28 11:19:42] Set ATHENA_PROC_NUMBER=4
[2026-02-28 11:19:42] Set ATHENA_CORE_NUMBER=4
[2026-02-28 11:19:42] Starting ATLAS job with PandaID=7032232016
[2026-02-28 11:19:42] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot76/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-28 13:54:21]  *** The last 200 lines of the pilot log: ***
[2026-02-28 13:54:21] 2026-02-28 12:53:38,879 | INFO     | sum of square deviations: 964976232.5
[2026-02-28 13:54:21] 2026-02-28 12:53:38,879 | INFO     | sum of deviations: 5895362995.000002
[2026-02-28 13:54:21] 2026-02-28 12:53:38,879 | INFO     | mean x: 1772278450.5
[2026-02-28 13:54:21] 2026-02-28 12:53:38,879 | INFO     | mean y: 2344060.2602739725
[2026-02-28 13:54:21] 2026-02-28 12:53:38,879 | INFO     | intersect: -10825098566.84468
[2026-02-28 13:54:21] 2026-02-28 12:53:38,880 | INFO     | chi2: 1.2763723310927488
[2026-02-28 13:54:21] 2026-02-28 12:53:38,880 | INFO     | current chi2=1.2763723310927488 (change=-0.07326406206883765 %)
[2026-02-28 13:54:21] 2026-02-28 12:53:38,880 | INFO     | right removable region: 145
[2026-02-28 13:54:21] 2026-02-28 12:53:38,880 | INFO     | sum of square deviations: 964976232.5
[2026-02-28 13:54:21] 2026-02-28 12:53:38,880 | INFO     | sum of deviations: -10579820083.499998
[2026-02-28 13:54:21] 2026-02-28 12:53:38,880 | INFO     | mean x: 1772278755.5
[2026-02-28 13:54:21] 2026-02-28 12:53:38,880 | INFO     | mean y: 2368691.0753424657
[2026-02-28 13:54:21] 2026-02-28 12:53:38,880 | INFO     | intersect: 19433303608.94575
[2026-02-28 13:54:21] 2026-02-28 12:53:38,881 | INFO     | chi2: 0.02197103974147161
[2026-02-28 13:54:21] 2026-02-28 12:53:38,881 | INFO     | current chi2=0.02197103974147161 (change=98.27737282593387 %)
[2026-02-28 13:54:21] 2026-02-28 12:53:38,881 | INFO     | sum of square deviations: 869188390.0
[2026-02-28 13:54:21] 2026-02-28 12:53:38,881 | INFO     | sum of deviations: -7748417762.000001
[2026-02-28 13:54:21] 2026-02-28 12:53:38,881 | INFO     | mean x: 1772278908.0
[2026-02-28 13:54:21] 2026-02-28 12:53:38,881 | INFO     | mean y: 2364172.829787234
[2026-02-28 13:54:21] 2026-02-28 12:53:38,881 | INFO     | intersect: 15801421693.564922
[2026-02-28 13:54:21] 2026-02-28 12:53:38,882 | INFO     | chi2: 0.015348687220131357
[2026-02-28 13:54:21] 2026-02-28 12:53:38,882 | INFO     | current chi2=0.015348687220131357 (change=30.14127960835727 %)
[2026-02-28 13:54:21] 2026-02-28 12:53:38,882 | INFO     | sum of square deviations: 779958810.0
[2026-02-28 13:54:21] 2026-02-28 12:53:38,882 | INFO     | sum of deviations: -5852651466.000001
[2026-02-28 13:54:21] 2026-02-28 12:53:38,882 | INFO     | mean x: 1772279060.5
[2026-02-28 13:54:21] 2026-02-28 12:53:38,882 | INFO     | mean y: 2360929.161764706
[2026-02-28 13:54:21] 2026-02-28 12:53:38,882 | INFO     | intersect: 13301180698.370382
[2026-02-28 13:54:21] 2026-02-28 12:53:38,883 | INFO     | chi2: 0.012689503885089288
[2026-02-28 13:54:21] 2026-02-28 12:53:38,883 | INFO     | current chi2=0.012689503885089288 (change=17.325151636123522 %)
[2026-02-28 13:54:21] 2026-02-28 12:53:38,883 | INFO     | left removable region: 30
[2026-02-28 13:54:21] 2026-02-28 12:53:38,883 | INFO     | sum of square deviations: 471562330.0
[2026-02-28 13:54:21] 2026-02-28 12:53:38,883 | INFO     | sum of deviations: -1557474692.0000002
[2026-02-28 13:54:21] 2026-02-28 12:53:38,883 | INFO     | mean x: 1772279335.0
[2026-02-28 13:54:21] 2026-02-28 12:53:38,883 | INFO     | mean y: 2352358.052173913
[2026-02-28 13:54:21] 2026-02-28 12:53:38,883 | INFO     | intersect: 5855831391.072242
[2026-02-28 13:54:21] 2026-02-28 12:53:38,884 | INFO     | chi2: 0.0047224856799768814
[2026-02-28 13:54:21] 2026-02-28 12:53:38,884 | INFO     | current memory leak: -3.30 B/s (using 115 data points, chi2=0.00)
[2026-02-28 13:54:21] 2026-02-28 12:53:38,884 | INFO     | could have reported an average CPU frequency of 2757 MHz (9 samples)
[2026-02-28 13:54:21] 2026-02-28 12:53:38,884 | INFO     | ..............................
[2026-02-28 13:54:21] 2026-02-28 12:53:38,884 | INFO     | . Timing measurements:
[2026-02-28 13:54:21] 2026-02-28 12:53:38,884 | INFO     | . get job = 0 s
[2026-02-28 13:54:21] 2026-02-28 12:53:38,884 | INFO     | . initial setup = 7 s
[2026-02-28 13:54:21] 2026-02-28 12:53:38,884 | INFO     | . payload setup = 8 s
[2026-02-28 13:54:21] 2026-02-28 12:53:38,884 | INFO     | . stage-in = 0 s
[2026-02-28 13:54:21] 2026-02-28 12:53:38,884 | INFO     | . payload execution = 9192 s
[2026-02-28 13:54:21] 2026-02-28 12:53:38,884 | INFO     | . stage-out = 0 s
[2026-02-28 13:54:21] 2026-02-28 12:53:38,884 | INFO     | . log creation = 0 s
[2026-02-28 13:54:21] 2026-02-28 12:53:38,884 | INFO     | ..............................
[2026-02-28 13:54:21] 2026-02-28 12:53:38,947 | INFO     | 
[2026-02-28 13:54:21] 2026-02-28 12:53:38,947 | INFO     | job summary report
[2026-02-28 13:54:21] 2026-02-28 12:53:38,947 | INFO     | --------------------------------------------------
[2026-02-28 13:54:21] 2026-02-28 12:53:38,947 | INFO     | PanDA job id: 7032232016
[2026-02-28 13:54:21] 2026-02-28 12:53:38,947 | INFO     | task id: 48838610
[2026-02-28 13:54:21] 2026-02-28 12:53:38,947 | INFO     | errors: (none)
[2026-02-28 13:54:21] 2026-02-28 12:53:38,948 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-28 13:54:21] 2026-02-28 12:53:38,948 | INFO     | pilot state: finished 
[2026-02-28 13:54:21] 2026-02-28 12:53:38,948 | INFO     | transexitcode: 0
[2026-02-28 13:54:21] 2026-02-28 12:53:38,948 | INFO     | exeerrorcode: 0
[2026-02-28 13:54:21] 2026-02-28 12:53:38,948 | INFO     | exeerrordiag: 
[2026-02-28 13:54:21] 2026-02-28 12:53:38,948 | INFO     | exitcode: 0
[2026-02-28 13:54:21] 2026-02-28 12:53:38,948 | INFO     | exitmsg: OK
[2026-02-28 13:54:21] 2026-02-28 12:53:38,948 | INFO     | cpuconsumptiontime: 35298 s
[2026-02-28 13:54:21] 2026-02-28 12:53:38,948 | INFO     | nevents: 400
[2026-02-28 13:54:21] 2026-02-28 12:53:38,948 | INFO     | neventsw: 0
[2026-02-28 13:54:21] 2026-02-28 12:53:38,948 | INFO     | pid: 2448876
[2026-02-28 13:54:21] 2026-02-28 12:53:38,948 | INFO     | pgrp: 2448876
[2026-02-28 13:54:21] 2026-02-28 12:53:38,949 | INFO     | corecount: 4
[2026-02-28 13:54:21] 2026-02-28 12:53:38,949 | INFO     | event service: False
[2026-02-28 13:54:21] 2026-02-28 12:53:38,949 | INFO     | sizes: {0: 2281145, 1: 2282274, 12: 2282274, 9203: 2310856, 9204: 2310855, 9205: 2319931, 9206: 2320373}
[2026-02-28 13:54:21] 2026-02-28 12:53:38,949 | INFO     | --------------------------------------------------
[2026-02-28 13:54:21] 2026-02-28 12:53:38,949 | INFO     | 
[2026-02-28 13:54:21] 2026-02-28 12:53:38,949 | INFO     | executing command: ls -lF /scratch/boinc/var/slot76/slots/0
[2026-02-28 13:54:21] 2026-02-28 12:53:38,976 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-28 13:54:21] 2026-02-28 12:53:38,976 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-28 13:54:21] 2026-02-28 12:53:38,976 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-28 13:54:21] 2026-02-28 12:53:38,976 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-28 13:54:21] 2026-02-28 12:53:38,976 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-28 13:54:21] 2026-02-28 12:53:38,976 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-28 13:54:21] 2026-02-28 12:53:38,977 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-28 13:54:21] 2026-02-28 12:53:38,977 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-28 13:54:21] 2026-02-28 12:53:38,977 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-28 13:54:21] 2026-02-28 12:53:38,977 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-28 13:54:21] 2026-02-28 12:53:38,977 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-28 13:54:21] 2026-02-28 12:53:38,977 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-28 13:54:21] 2026-02-28 12:53:38,977 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-28 13:54:21] 2026-02-28 12:53:38,977 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-28 13:54:21] 2026-02-28 12:53:38,977 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-28 13:54:21] 2026-02-28 12:53:38,977 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-28 13:54:21] 2026-02-28 12:53:38,977 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-28 13:54:21] 2026-02-28 12:53:38,978 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-28 13:54:21] 2026-02-28 12:53:38,978 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-28 13:54:21] 2026-02-28 12:53:38,978 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-28 13:54:21] 2026-02-28 12:53:38,978 | INFO     | job 7032232016 has completed (purged errors)
[2026-02-28 13:54:21] 2026-02-28 12:53:38,978 | INFO     | overall cleanup function is called
[2026-02-28 13:54:21] 2026-02-28 12:53:39,985 | INFO     | --- collectZombieJob: --- 10, [2448876]
[2026-02-28 13:54:21] 2026-02-28 12:53:39,985 | INFO     | zombie collector waiting for pid 2448876
[2026-02-28 13:54:21] 2026-02-28 12:53:39,985 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-28 13:54:21] 2026-02-28 12:53:39,985 | INFO     | collected zombie processes
[2026-02-28 13:54:21] 2026-02-28 12:53:39,985 | INFO     | will attempt to kill all subprocesses of pid=2448876
[2026-02-28 13:54:21] 2026-02-28 12:53:40,976 | INFO     | process IDs to be killed: [2448876] (in reverse order)
[2026-02-28 13:54:21] 2026-02-28 12:53:41,230 | WARNING  | found no corresponding commands to process id(s)
[2026-02-28 13:54:21] 2026-02-28 12:53:41,231 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-28 13:54:21] 2026-02-28 12:53:41,280 | INFO     | did not find any defunct processes belonging to 2448876
[2026-02-28 13:54:21] 2026-02-28 12:53:41,327 | INFO     | did not find any defunct processes belonging to 2448876
[2026-02-28 13:54:21] 2026-02-28 12:53:41,328 | INFO     | ready for new job
[2026-02-28 13:54:21] 2026-02-28 12:53:41,328 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-28 13:54:21] 2026-02-28 12:53:41,330 | INFO     | **************************************
[2026-02-28 13:54:21] 2026-02-28 12:53:41,330 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-28 13:54:21] 2026-02-28 12:53:41,330 | INFO     | **************************************
[2026-02-28 13:54:21] 2026-02-28 12:53:41,330 | INFO     | 
[2026-02-28 13:54:21] 2026-02-28 12:53:41,340 | INFO     | architecture information:
[2026-02-28 13:54:21] 2026-02-28 12:53:41,340 | INFO     | executing command: cat /etc/os-release
[2026-02-28 13:54:21] 2026-02-28 12:53:41,361 | INFO     | cat /etc/os-release:
[2026-02-28 13:54:21] NAME="CentOS Linux"
[2026-02-28 13:54:21] VERSION="7 (Core)"
[2026-02-28 13:54:21] ID="centos"
[2026-02-28 13:54:21] ID_LIKE="rhel fedora"
[2026-02-28 13:54:21] VERSION_ID="7"
[2026-02-28 13:54:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-28 13:54:21] ANSI_COLOR="0;31"
[2026-02-28 13:54:21] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-28 13:54:21] HOME_URL="https://www.centos.org/"
[2026-02-28 13:54:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-28 13:54:21] 
[2026-02-28 13:54:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-28 13:54:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-28 13:54:21] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-28 13:54:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-28 13:54:21] 
[2026-02-28 13:54:21] 2026-02-28 12:53:41,362 | INFO     | **************************************
[2026-02-28 13:54:21] 2026-02-28 12:53:41,477 | WARNING  | process 2448876 can no longer be monitored (due to stat problems) - aborting
[2026-02-28 13:54:21] 2026-02-28 12:53:41,865 | INFO     | executing command: df -mP /scratch/boinc/var/slot76/slots/0
[2026-02-28 13:54:21] 2026-02-28 12:53:41,886 | INFO     | sufficient remaining disk space (3308792053760 B)
[2026-02-28 13:54:21] 2026-02-28 12:53:41,887 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-28 13:54:21] 2026-02-28 12:53:41,887 | INFO     | current server update state: UPDATING_FINAL
[2026-02-28 13:54:21] 2026-02-28 12:53:41,887 | INFO     | update_server=False
[2026-02-28 13:54:21] 2026-02-28 12:53:41,887 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-28 13:54:21] 2026-02-28 12:53:41,976 | INFO     | using path: /scratch/boinc/var/slot76/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-02-28 13:54:21] 2026-02-28 12:53:41,977 | INFO     | using path: /scratch/boinc/var/slot76/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-02-28 13:54:21] 2026-02-28 12:53:41,978 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-02-28 13:54:21] 2026-02-28 12:53:41,978 | WARNING  | maxPSS not found in memory monitor output
[2026-02-28 13:54:21] 2026-02-28 12:53:41,978 | INFO     | reaping zombies for max 20 seconds
[2026-02-28 13:54:21] 2026-02-28 12:53:41,995 | INFO     | checking for looping job (in state=finished)
[2026-02-28 13:54:21] 2026-02-28 12:53:41,995 | INFO     | using looping job limit: 7200 s
[2026-02-28 13:54:21] 2026-02-28 12:53:41,996 | INFO     | skipping file size check of payload stdout file (/scratch/boinc/var/slot76/slots/0/PanDA_Pilot-7032232016/payload.stdout) since it has not been created yet
[2026-02-28 13:54:21] 2026-02-28 12:53:41,996 | INFO     | executing command: df -mP /scratch/boinc/var/slot76/slots/0
[2026-02-28 13:54:21] 2026-02-28 12:53:42,012 | INFO     | sufficient remaining disk space (3308792053760 B)
[2026-02-28 13:54:21] 2026-02-28 12:53:42,012 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-02-28 13:54:21] 2026-02-28 12:53:42,013 | INFO     | output file size check: skipping output file /scratch/boinc/var/slot76/slots/0/PanDA_Pilot-7032232016/HITS.48838610._000830.pool.root.1 since it does not exist
[2026-02-28 13:54:21] 2026-02-28 12:53:42,582 | INFO     | job.realtimelogging is not enabled
[2026-02-28 13:54:21] 2026-02-28 12:53:42,673 | INFO     | number of running child processes to parent process 2448876: 1
[2026-02-28 13:54:21] 2026-02-28 12:53:42,673 | INFO     | maximum number of monitored processes: 6
[2026-02-28 13:54:21] 2026-02-28 12:53:42,673 | INFO     | aborting job monitoring since job object (job id=7032232016) has expired
[2026-02-28 13:54:21] 2026-02-28 12:53:42,674 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-28 13:54:21] 2026-02-28 12:53:42,674 | INFO     | will abort loop
[2026-02-28 13:54:21] 2026-02-28 12:53:42,689 | INFO     | all payload control threads have been joined
[2026-02-28 13:54:21] 2026-02-28 12:53:42,692 | INFO     | all job control threads have been joined
[2026-02-28 13:54:21] 2026-02-28 12:53:42,698 | INFO     | all data control threads have been joined
[2026-02-28 13:54:21] 2026-02-28 12:53:42,893 | INFO     | [job] retrieve thread has finished
[2026-02-28 13:54:21] 2026-02-28 12:53:43,221 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-28 13:54:21] 2026-02-28 12:53:43,438 | INFO     | [payload] failed_post thread has finished
[2026-02-28 13:54:21] 2026-02-28 12:53:43,561 | INFO     | [payload] execute_payloads thread has finished
[2026-02-28 13:54:21] 2026-02-28 12:53:43,588 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-28 13:54:21] 2026-02-28 12:53:43,679 | INFO     | [job] job monitor thread has finished
[2026-02-28 13:54:21] 2026-02-28 12:53:43,680 | INFO     | [job] validate thread has finished
[2026-02-28 13:54:21] 2026-02-28 12:53:43,695 | INFO     | [payload] control thread has finished
[2026-02-28 13:54:21] 2026-02-28 12:53:43,697 | INFO     | [job] control thread has finished
[2026-02-28 13:54:21] 2026-02-28 12:53:43,703 | INFO     | [data] control thread has finished
[2026-02-28 13:54:21] 2026-02-28 12:53:43,879 | INFO     | [job] create_data_payload thread has finished
[2026-02-28 13:54:21] 2026-02-28 12:53:43,957 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-28 13:54:21] 2026-02-28 12:53:44,199 | INFO     | [payload] validate_pre thread has finished
[2026-02-28 13:54:21] 2026-02-28 12:53:44,230 | INFO     | [payload] validate_post thread has finished
[2026-02-28 13:54:21] 2026-02-28 12:53:44,383 | INFO     | [data] copytool_in thread has finished
[2026-02-28 13:54:21] 2026-02-28 12:53:44,858 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-28 13:54:21] 2026-02-28 12:53:44,962 | INFO     | [job] queue monitor thread has finished
[2026-02-28 13:54:21] 2026-02-28 12:53:45,226 | INFO     | [data] copytool_out thread has finished
[2026-02-28 13:54:21] 2026-02-28 12:53:48,864 | INFO     | [data] queue_monitor thread has finished
[2026-02-28 13:54:21] 2026-02-28 12:54:11,468 | INFO     | PID=2443251 has CPU usage=12.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-02-28 13:54:21] 2026-02-28 12:54:11,468 | INFO     | .. there are 19 such processes running
[2026-02-28 13:54:21] 2026-02-28 12:54:11,468 | INFO     | found 0 job(s) in 20 queues
[2026-02-28 13:54:21] 2026-02-28 12:54:11,469 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-28 13:54:21] 2026-02-28 12:54:11,469 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-28 13:54:21] 2026-02-28 12:54:15,328 | INFO     | [monitor] cgroup control has ended
[2026-02-28 13:54:21] 2026-02-28 12:54:16,431 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22823857850176)>', '<ExcThread(monitor, started 22823614813952)>']
[2026-02-28 13:54:21] 2026-02-28 12:54:16,494 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-28 13:54:21] 2026-02-28 12:54:16,494 | INFO     | [monitor] control thread has ended
[2026-02-28 13:54:21] 2026-02-28 12:54:21,456 | INFO     | all workflow threads have been joined
[2026-02-28 13:54:21] 2026-02-28 12:54:21,456 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-28 13:54:21] 2026-02-28 12:54:21,456 | INFO     | traces error code: 0
[2026-02-28 13:54:21] 2026-02-28 12:54:21,456 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-28 13:54:21] 2026-02-28 12:54:21,588 [wrapper] ==== pilot stdout END ====
[2026-02-28 13:54:21] 2026-02-28 12:54:21,591 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-28 13:54:21] 2026-02-28 12:54:21,595 [wrapper] pilotpid: 2443251
[2026-02-28 13:54:21] 2026-02-28 12:54:21,598 [wrapper] Pilot exit status: 0
[2026-02-28 13:54:21] 2026-02-28 12:54:21,611 [wrapper] pandaids: 7032232016
[2026-02-28 13:54:21] 2026-02-28 12:54:21,766 [wrapper] cleanup supervisor_pilot 2734500 2443252
[2026-02-28 13:54:21] 2026-02-28 12:54:21,771 [wrapper] Test setup, not cleaning
[2026-02-28 13:54:21] 2026-02-28 12:54:21,775 [wrapper] apfmon messages muted
[2026-02-28 13:54:21] 2026-02-28 12:54:21,779 [wrapper] ==== wrapper stdout END ====
[2026-02-28 13:54:21] 2026-02-28 12:54:21,783 [wrapper] ==== wrapper stderr END ====
[2026-02-28 13:54:21]  *** Error codes and diagnostics ***
[2026-02-28 13:54:21]     "exeErrorCode": 0,
[2026-02-28 13:54:21]     "exeErrorDiag": "",
[2026-02-28 13:54:21]     "pilotErrorCode": 0,
[2026-02-28 13:54:21]     "pilotErrorDiag": "",
[2026-02-28 13:54:21]  *** Listing of results directory ***
[2026-02-28 13:54:21] total 468280
[2026-02-28 13:54:21] -rw-r--r-- 1 boinc boinc    584627 Feb 27 23:54 pilot3.tar.gz
[2026-02-28 13:54:21] -rw-r--r-- 1 boinc boinc      5111 Feb 27 23:55 queuedata.json
[2026-02-28 13:54:21] -rwx------ 1 boinc boinc     36322 Feb 27 23:56 runpilot2-wrapper.sh
[2026-02-28 13:54:21] -rw-r--r-- 1 boinc boinc       100 Feb 28 11:19 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-28 13:54:21] -rwxr-xr-x 1 boinc boinc      7986 Feb 28 11:19 run_atlas
[2026-02-28 13:54:21] -rw-r--r-- 1 boinc boinc       105 Feb 28 11:19 job.xml
[2026-02-28 13:54:21] -rw-r--r-- 2 boinc boinc 269931917 Feb 28 11:19 EVNT.48343779._000033.pool.root.1
[2026-02-28 13:54:21] -rw-r--r-- 1 boinc boinc      6696 Feb 28 11:19 init_data.xml
[2026-02-28 13:54:21] -rw-r--r-- 2 boinc boinc     15845 Feb 28 11:19 start_atlas.sh
[2026-02-28 13:54:21] drwxrwx--x 2 boinc boinc      4096 Feb 28 11:19 shared
[2026-02-28 13:54:21] -rw-r--r-- 2 boinc boinc    597977 Feb 28 11:19 input.tar.gz
[2026-02-28 13:54:21] -rw-r--r-- 1 boinc boinc         0 Feb 28 11:19 boinc_lockfile
[2026-02-28 13:54:21] -rw-r--r-- 1 boinc boinc      2576 Feb 28 11:19 pandaJob.out
[2026-02-28 13:54:21] -rw------- 1 boinc boinc    998790 Feb 28 11:19 agis_schedconf.cvmfs.json
[2026-02-28 13:54:21] -rw------- 1 boinc boinc   1513015 Feb 28 11:19 agis_ddmendpoints.agis.ALL.json
[2026-02-28 13:54:21] -rw------- 1 boinc boinc       443 Feb 28 11:20 workernode_map.json
[2026-02-28 13:54:21] drwx------ 5 boinc boinc      4096 Feb 28 11:20 pilot3
[2026-02-28 13:54:21] -rw-r--r-- 1 boinc boinc       529 Feb 28 13:53 boinc_task_state.xml
[2026-02-28 13:54:21] -rw------- 1 boinc boinc 202368388 Feb 28 13:53 HITS.48838610._000830.pool.root.1
[2026-02-28 13:54:21] -rw------- 1 boinc boinc        95 Feb 28 13:53 pilot_heartbeat.json
[2026-02-28 13:54:21] -rw------- 1 boinc boinc      1024 Feb 28 13:53 memory_monitor_summary.json
[2026-02-28 13:54:21] -rw------- 1 boinc boinc    342299 Feb 28 13:53 log.48838610._000830.job.log.tgz.1
[2026-02-28 13:54:21] -rw------- 1 boinc boinc      6338 Feb 28 13:53 heartbeat.json
[2026-02-28 13:54:21] -rw-r--r-- 1 boinc boinc        27 Feb 28 13:53 wrapper_checkpoint.txt
[2026-02-28 13:54:21] -rw-r--r-- 1 boinc boinc      8192 Feb 28 13:53 boinc_mmap_file
[2026-02-28 13:54:21] -rw------- 1 boinc boinc      6669 Feb 28 13:54 pilotlog.txt
[2026-02-28 13:54:21] -rw------- 1 boinc boinc   1303450 Feb 28 13:54 log.48838610._000830.job.log.1
[2026-02-28 13:54:21] -rw------- 1 boinc boinc       357 Feb 28 13:54 output.list
[2026-02-28 13:54:21] -rw-r--r-- 1 boinc boinc       620 Feb 28 13:54 runtime_log
[2026-02-28 13:54:21] -rw------- 1 boinc boinc   1658880 Feb 28 13:54 result.tar.gz
[2026-02-28 13:54:21] -rw------- 1 boinc boinc       662 Feb 28 13:54 sprMDmqvLG9n9Rq4apOajLDm4fhM0noT9bVooX4SDm473KDm3QiaUn.diag
[2026-02-28 13:54:21] -rw-r--r-- 1 boinc boinc      9204 Feb 28 13:54 runtime_log.err
[2026-02-28 13:54:21] -rw-r--r-- 1 boinc boinc     21328 Feb 28 13:54 stderr.txt
[2026-02-28 13:54:21] HITS file was successfully produced:
[2026-02-28 13:54:21] -rw------- 1 boinc boinc 202368388 Feb 28 13:53 shared/HITS.pool.root.1
[2026-02-28 13:54:21]  *** Contents of shared directory: ***
[2026-02-28 13:54:21] total 463464
[2026-02-28 13:54:21] -rw-r--r-- 2 boinc boinc 269931917 Feb 28 11:19 ATLAS.root_0
[2026-02-28 13:54:21] -rw-r--r-- 2 boinc boinc     15845 Feb 28 11:19 start_atlas.sh
[2026-02-28 13:54:21] -rw-r--r-- 2 boinc boinc    597977 Feb 28 11:19 input.tar.gz
[2026-02-28 13:54:21] -rw------- 1 boinc boinc 202368388 Feb 28 13:53 HITS.pool.root.1
[2026-02-28 13:54:21] -rw------- 1 boinc boinc   1658880 Feb 28 13:54 result.tar.gz
13:54:23 (2439264): run_atlas exited; CPU time 35787.672003
13:54:23 (2439264): called boinc_finish(0)

</stderr_txt>
]]>

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