Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:24:17 (4517): wrapper (7.7.26015): starting
09:24:17 (4517): wrapper: running run_atlas (--nthreads 8)
[2026-02-28 09:24:17] Arguments: --nthreads 8
[2026-02-28 09:24:17] Threads: 8
[2026-02-28 09:24:17] Checking for CVMFS
[2026-02-28 09:24:17] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-28 09:24:34] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-28 09:24:34] Running cvmfs_config stat atlas.cern.ch
[2026-02-28 09:24:34] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-28 09:24:34] 2.11.2.0 12981 107170 103392 156726 3 49 24387211 25165825 0 130560 112 39099267 99.822 31009447 1295 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://141.99.253.245:3128/ 1
[2026-02-28 09:24:34] CVMFS is ok
[2026-02-28 09:24:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-28 09:24:34] Checking for apptainer binary...
[2026-02-28 09:24:34] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-28 09:24:34] Running /usr/bin/apptainer --version
[2026-02-28 09:24:34] apptainer version 1.3.2-1.el7
[2026-02-28 09:24:34] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-28 09:24:36] cg-vwn366.simple-grid.lan
[2026-02-28 09:24:36] apptainer works
[2026-02-28 09:24:36] Set ATHENA_PROC_NUMBER=8
[2026-02-28 09:24:36] Set ATHENA_CORE_NUMBER=8
[2026-02-28 09:24:36] Starting ATLAS job with PandaID=7032222961
[2026-02-28 09:24:36] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-28 13:19:19]  *** The last 200 lines of the pilot log: ***
[2026-02-28 13:19:19] 2026-02-28 12:18:27,093 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-28 13:19:19] 2026-02-28 12:18:27,093 | INFO     | log transfer has been attempted: DONE
[2026-02-28 13:19:19] 2026-02-28 12:18:27,094 | INFO     | job 7032222961 has finished - writing final server update
[2026-02-28 13:19:19] 2026-02-28 12:18:27,094 | INFO     | total number of processed events: 400 (read)
[2026-02-28 13:19:19] 2026-02-28 12:18:27,096 | INFO     | using path: /var/lib/boinc/slots/6/PanDA_Pilot-7032222961/memory_monitor_summary.json (trf name=prmon)
[2026-02-28 13:19:19] 2026-02-28 12:18:27,097 | INFO     | extracted standard info from prmon json
[2026-02-28 13:19:19] 2026-02-28 12:18:27,097 | INFO     | extracted standard memory fields from prmon json
[2026-02-28 13:19:19] 2026-02-28 12:18:27,097 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-28 13:19:19] 2026-02-28 12:18:27,098 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-28 13:19:19] 2026-02-28 12:18:27,098 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-28 13:19:19] 2026-02-28 12:18:27,103 | INFO     | fitting pss+swap vs Time
[2026-02-28 13:19:19] 2026-02-28 12:18:27,104 | INFO     | sum of square deviations: 3723716330.0
[2026-02-28 13:19:19] 2026-02-28 12:18:27,106 | INFO     | sum of deviations: -28599464724.0
[2026-02-28 13:19:19] 2026-02-28 12:18:27,106 | INFO     | mean x: 1772274134.0
[2026-02-28 13:19:19] 2026-02-28 12:18:27,106 | INFO     | mean y: 2529053.9475982534
[2026-02-28 13:19:19] 2026-02-28 12:18:27,106 | INFO     | intersect: 13614224222.089111
[2026-02-28 13:19:19] 2026-02-28 12:18:27,107 | INFO     | chi2: 2.518931568972611
[2026-02-28 13:19:19] 2026-02-28 12:18:27,107 | INFO     | sum of square deviations: 3485088600.0
[2026-02-28 13:19:19] 2026-02-28 12:18:27,109 | INFO     | sum of deviations: -12531124988.500006
[2026-02-28 13:19:19] 2026-02-28 12:18:27,110 | INFO     | mean x: 1772273981.5
[2026-02-28 13:19:19] 2026-02-28 12:18:27,110 | INFO     | mean y: 2539151.0491071427
[2026-02-28 13:19:19] 2026-02-28 12:18:27,110 | INFO     | intersect: 6374998885.944527
[2026-02-28 13:19:19] 2026-02-28 12:18:27,111 | INFO     | chi2: 1.7559710191082882
[2026-02-28 13:19:19] 2026-02-28 12:18:27,111 | INFO     | current chi2=1.7559710191082882 (change=30.28905426658769 %)
[2026-02-28 13:19:19] 2026-02-28 12:18:27,111 | INFO     | sum of square deviations: 3256879670.0
[2026-02-28 13:19:19] 2026-02-28 12:18:27,113 | INFO     | sum of deviations: -11904788243.000006
[2026-02-28 13:19:19] 2026-02-28 12:18:27,113 | INFO     | mean x: 1772273829.0
[2026-02-28 13:19:19] 2026-02-28 12:18:27,113 | INFO     | mean y: 2539569.584474886
[2026-02-28 13:19:19] 2026-02-28 12:18:27,114 | INFO     | intersect: 6480686378.998469
[2026-02-28 13:19:19] 2026-02-28 12:18:27,114 | INFO     | chi2: 1.7556064161663265
[2026-02-28 13:19:19] 2026-02-28 12:18:27,114 | INFO     | current chi2=1.7556064161663265 (change=0.020763608168594606 %)
[2026-02-28 13:19:19] 2026-02-28 12:18:27,114 | INFO     | right removable region: 218
[2026-02-28 13:19:19] 2026-02-28 12:18:27,115 | INFO     | sum of square deviations: 3485088600.0
[2026-02-28 13:19:19] 2026-02-28 12:18:27,117 | INFO     | sum of deviations: -64355901122.50001
[2026-02-28 13:19:19] 2026-02-28 12:18:27,117 | INFO     | mean x: 1772274286.5
[2026-02-28 13:19:19] 2026-02-28 12:18:27,117 | INFO     | mean y: 2551680.9151785714
[2026-02-28 13:19:19] 2026-02-28 12:18:27,117 | INFO     | intersect: 32729498348.481464
[2026-02-28 13:19:19] 2026-02-28 12:18:27,118 | INFO     | chi2: 1.0264979175974651
[2026-02-28 13:19:19] 2026-02-28 12:18:27,118 | INFO     | current chi2=1.0264979175974651 (change=59.248677882260225 %)
[2026-02-28 13:19:19] 2026-02-28 12:18:27,118 | INFO     | sum of square deviations: 3256879670.0
[2026-02-28 13:19:19] 2026-02-28 12:18:27,120 | INFO     | sum of deviations: -67633921593.00001
[2026-02-28 13:19:19] 2026-02-28 12:18:27,120 | INFO     | mean x: 1772274439.0
[2026-02-28 13:19:19] 2026-02-28 12:18:27,121 | INFO     | mean y: 2553854.4611872146
[2026-02-28 13:19:19] 2026-02-28 12:18:27,121 | INFO     | intersect: 36806452860.2246
[2026-02-28 13:19:19] 2026-02-28 12:18:27,121 | INFO     | chi2: 0.990578857815489
[2026-02-28 13:19:19] 2026-02-28 12:18:27,121 | INFO     | current chi2=0.990578857815489 (change=3.499184865961073 %)
[2026-02-28 13:19:19] 2026-02-28 12:18:27,121 | INFO     | left removable region: 20
[2026-02-28 13:19:19] 2026-02-28 12:18:27,122 | INFO     | sum of square deviations: 2406926989.5
[2026-02-28 13:19:19] 2026-02-28 12:18:27,123 | INFO     | sum of deviations: -38269826810.0
[2026-02-28 13:19:19] 2026-02-28 12:18:27,124 | INFO     | mean x: 1772274408.5
[2026-02-28 13:19:19] 2026-02-28 12:18:27,124 | INFO     | mean y: 2557149.01010101
[2026-02-28 13:19:19] 2026-02-28 12:18:27,124 | INFO     | intersect: 28181490273.682762
[2026-02-28 13:19:19] 2026-02-28 12:18:27,124 | INFO     | chi2: 0.19002236901136454
[2026-02-28 13:19:19] 2026-02-28 12:18:27,125 | INFO     | current memory leak: -15.90 B/s (using 198 data points, chi2=0.19)
[2026-02-28 13:19:19] 2026-02-28 12:18:27,125 | INFO     | could have reported an average CPU frequency of 1999 MHz (11 samples)
[2026-02-28 13:19:19] 2026-02-28 12:18:27,125 | INFO     | ..............................
[2026-02-28 13:19:19] 2026-02-28 12:18:27,126 | INFO     | . Timing measurements:
[2026-02-28 13:19:19] 2026-02-28 12:18:27,126 | INFO     | . get job = 0 s
[2026-02-28 13:19:19] 2026-02-28 12:18:27,126 | INFO     | . initial setup = 8 s
[2026-02-28 13:19:19] 2026-02-28 12:18:27,126 | INFO     | . payload setup = 8 s
[2026-02-28 13:19:19] 2026-02-28 12:18:27,126 | INFO     | . stage-in = 0 s
[2026-02-28 13:19:19] 2026-02-28 12:18:27,126 | INFO     | . payload execution = 13925 s
[2026-02-28 13:19:19] 2026-02-28 12:18:27,126 | INFO     | . stage-out = 1 s
[2026-02-28 13:19:19] 2026-02-28 12:18:27,127 | INFO     | . log creation = 0 s
[2026-02-28 13:19:19] 2026-02-28 12:18:27,127 | INFO     | ..............................
[2026-02-28 13:19:19] 2026-02-28 12:18:27,242 | INFO     | 
[2026-02-28 13:19:19] 2026-02-28 12:18:27,242 | INFO     | job summary report
[2026-02-28 13:19:19] 2026-02-28 12:18:27,242 | INFO     | --------------------------------------------------
[2026-02-28 13:19:19] 2026-02-28 12:18:27,242 | INFO     | PanDA job id: 7032222961
[2026-02-28 13:19:19] 2026-02-28 12:18:27,243 | INFO     | task id: 48843720
[2026-02-28 13:19:19] 2026-02-28 12:18:27,243 | INFO     | errors: (none)
[2026-02-28 13:19:19] 2026-02-28 12:18:27,243 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-28 13:19:19] 2026-02-28 12:18:27,243 | INFO     | pilot state: finished 
[2026-02-28 13:19:19] 2026-02-28 12:18:27,243 | INFO     | transexitcode: 0
[2026-02-28 13:19:19] 2026-02-28 12:18:27,243 | INFO     | exeerrorcode: 0
[2026-02-28 13:19:19] 2026-02-28 12:18:27,243 | INFO     | exeerrordiag: 
[2026-02-28 13:19:19] 2026-02-28 12:18:27,243 | INFO     | exitcode: 0
[2026-02-28 13:19:19] 2026-02-28 12:18:27,243 | INFO     | exitmsg: OK
[2026-02-28 13:19:19] 2026-02-28 12:18:27,243 | INFO     | cpuconsumptiontime: 105514 s
[2026-02-28 13:19:19] 2026-02-28 12:18:27,244 | INFO     | nevents: 400
[2026-02-28 13:19:19] 2026-02-28 12:18:27,244 | INFO     | neventsw: 0
[2026-02-28 13:19:19] 2026-02-28 12:18:27,244 | INFO     | pid: 13024
[2026-02-28 13:19:19] 2026-02-28 12:18:27,244 | INFO     | pgrp: 13024
[2026-02-28 13:19:19] 2026-02-28 12:18:27,244 | INFO     | corecount: 8
[2026-02-28 13:19:19] 2026-02-28 12:18:27,244 | INFO     | event service: False
[2026-02-28 13:19:19] 2026-02-28 12:18:27,244 | INFO     | sizes: {0: 2282144, 1: 2282378, 11: 2282378, 13938: 2312768, 13939: 2312767, 13941: 2321821, 13943: 2322005, 13945: 2322199}
[2026-02-28 13:19:19] 2026-02-28 12:18:27,244 | INFO     | --------------------------------------------------
[2026-02-28 13:19:19] 2026-02-28 12:18:27,244 | INFO     | 
[2026-02-28 13:19:19] 2026-02-28 12:18:27,245 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2026-02-28 13:19:19] 2026-02-28 12:18:27,291 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-28 13:19:19] 2026-02-28 12:18:27,291 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-28 13:19:19] 2026-02-28 12:18:27,291 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-28 13:19:19] 2026-02-28 12:18:27,291 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-28 13:19:19] 2026-02-28 12:18:27,292 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-28 13:19:19] 2026-02-28 12:18:27,292 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-28 13:19:19] 2026-02-28 12:18:27,292 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-28 13:19:19] 2026-02-28 12:18:27,292 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-28 13:19:19] 2026-02-28 12:18:27,292 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-28 13:19:19] 2026-02-28 12:18:27,292 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-28 13:19:19] 2026-02-28 12:18:27,292 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-28 13:19:19] 2026-02-28 12:18:27,292 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-28 13:19:19] 2026-02-28 12:18:27,292 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-28 13:19:19] 2026-02-28 12:18:27,292 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-28 13:19:19] 2026-02-28 12:18:27,293 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-28 13:19:19] 2026-02-28 12:18:27,293 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-28 13:19:19] 2026-02-28 12:18:27,293 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-28 13:19:19] 2026-02-28 12:18:27,293 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-28 13:19:19] 2026-02-28 12:18:27,293 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-28 13:19:19] 2026-02-28 12:18:27,293 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-28 13:19:19] 2026-02-28 12:18:27,293 | INFO     | job 7032222961 has completed (purged errors)
[2026-02-28 13:19:19] 2026-02-28 12:18:27,293 | INFO     | overall cleanup function is called
[2026-02-28 13:19:19] 2026-02-28 12:18:28,302 | INFO     | --- collectZombieJob: --- 10, [13024]
[2026-02-28 13:19:19] 2026-02-28 12:18:28,302 | INFO     | zombie collector waiting for pid 13024
[2026-02-28 13:19:19] 2026-02-28 12:18:28,302 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-28 13:19:19] 2026-02-28 12:18:28,302 | INFO     | collected zombie processes
[2026-02-28 13:19:19] 2026-02-28 12:18:28,302 | INFO     | will attempt to kill all subprocesses of pid=13024
[2026-02-28 13:19:19] 2026-02-28 12:18:28,361 | INFO     | process IDs to be killed: [13024] (in reverse order)
[2026-02-28 13:19:19] 2026-02-28 12:18:28,422 | WARNING  | found no corresponding commands to process id(s)
[2026-02-28 13:19:19] 2026-02-28 12:18:28,423 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-28 13:19:19] 2026-02-28 12:18:28,425 | INFO     | did not find any defunct processes belonging to 13024
[2026-02-28 13:19:19] 2026-02-28 12:18:28,427 | INFO     | did not find any defunct processes belonging to 13024
[2026-02-28 13:19:19] 2026-02-28 12:18:28,427 | INFO     | ready for new job
[2026-02-28 13:19:19] 2026-02-28 12:18:28,427 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-28 13:19:19] 2026-02-28 12:18:28,429 | INFO     | **************************************
[2026-02-28 13:19:19] 2026-02-28 12:18:28,430 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-28 13:19:19] 2026-02-28 12:18:28,430 | INFO     | **************************************
[2026-02-28 13:19:19] 2026-02-28 12:18:28,430 | INFO     | 
[2026-02-28 13:19:19] 2026-02-28 12:18:28,431 | INFO     | pilot is running in a VM
[2026-02-28 13:19:19] 2026-02-28 12:18:28,431 | INFO     | architecture information:
[2026-02-28 13:19:19] 2026-02-28 12:18:28,433 | INFO     | executing command: cat /etc/os-release
[2026-02-28 13:19:19] 2026-02-28 12:18:28,489 | INFO     | cat /etc/os-release:
[2026-02-28 13:19:19] NAME="CentOS Linux"
[2026-02-28 13:19:19] VERSION="7 (Core)"
[2026-02-28 13:19:19] ID="centos"
[2026-02-28 13:19:19] ID_LIKE="rhel fedora"
[2026-02-28 13:19:19] VERSION_ID="7"
[2026-02-28 13:19:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-28 13:19:19] ANSI_COLOR="0;31"
[2026-02-28 13:19:19] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-28 13:19:19] HOME_URL="https://www.centos.org/"
[2026-02-28 13:19:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-28 13:19:19] 
[2026-02-28 13:19:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-28 13:19:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-28 13:19:19] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-28 13:19:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-28 13:19:19] 
[2026-02-28 13:19:19] 2026-02-28 12:18:28,490 | INFO     | **************************************
[2026-02-28 13:19:19] 2026-02-28 12:18:28,993 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2026-02-28 13:19:19] 2026-02-28 12:18:29,044 | INFO     | sufficient remaining disk space (497765318656 B)
[2026-02-28 13:19:19] 2026-02-28 12:18:29,045 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-28 13:19:19] 2026-02-28 12:18:29,045 | INFO     | current server update state: UPDATING_FINAL
[2026-02-28 13:19:19] 2026-02-28 12:18:29,045 | INFO     | update_server=False
[2026-02-28 13:19:19] 2026-02-28 12:18:29,045 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-28 13:19:19] 2026-02-28 12:18:29,046 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-28 13:19:19] 2026-02-28 12:18:29,050 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-28 13:19:19] 2026-02-28 12:18:29,050 | INFO     | aborting loop
[2026-02-28 13:19:19] 2026-02-28 12:18:29,326 | INFO     | all data control threads have been joined
[2026-02-28 13:19:19] 2026-02-28 12:18:29,378 | INFO     | all payload control threads have been joined
[2026-02-28 13:19:19] 2026-02-28 12:18:29,433 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-28 13:19:19] 2026-02-28 12:18:30,051 | INFO     | [job] retrieve thread has finished
[2026-02-28 13:19:19] 2026-02-28 12:18:30,052 | INFO     | [job] queue monitor thread has finished
[2026-02-28 13:19:19] 2026-02-28 12:18:30,056 | INFO     | [job] job monitor thread has finished
[2026-02-28 13:19:19] 2026-02-28 12:18:30,193 | INFO     | [job] create_data_payload thread has finished
[2026-02-28 13:19:19] 2026-02-28 12:18:30,196 | INFO     | [job] validate thread has finished
[2026-02-28 13:19:19] 2026-02-28 12:18:30,199 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-28 13:19:19] 2026-02-28 12:18:30,317 | INFO     | all job control threads have been joined
[2026-02-28 13:19:19] 2026-02-28 12:18:30,332 | INFO     | [data] control thread has finished
[2026-02-28 13:19:19] 2026-02-28 12:18:30,368 | INFO     | [payload] validate_post thread has finished
[2026-02-28 13:19:19] 2026-02-28 12:18:30,370 | INFO     | [data] copytool_in thread has finished
[2026-02-28 13:19:19] 2026-02-28 12:18:30,384 | INFO     | [payload] control thread has finished
[2026-02-28 13:19:19] 2026-02-28 12:18:30,746 | INFO     | [payload] failed_post thread has finished
[2026-02-28 13:19:19] 2026-02-28 12:18:30,857 | INFO     | [payload] execute_payloads thread has finished
[2026-02-28 13:19:19] 2026-02-28 12:18:30,937 | INFO     | [payload] validate_pre thread has finished
[2026-02-28 13:19:19] 2026-02-28 12:18:31,323 | INFO     | [job] control thread has finished
[2026-02-28 13:19:19] 2026-02-28 12:18:31,439 | INFO     | [data] copytool_out thread has finished
[2026-02-28 13:19:19] 2026-02-28 12:18:31,591 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-28 13:19:19] 2026-02-28 12:18:35,597 | INFO     | [data] queue_monitor thread has finished
[2026-02-28 13:19:19] 2026-02-28 12:18:59,696 | INFO     | PID=8579 has CPU usage=4.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-02-28 13:19:19] 2026-02-28 12:18:59,697 | INFO     | found 0 job(s) in 20 queues
[2026-02-28 13:19:19] 2026-02-28 12:18:59,697 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-28 13:19:19] 2026-02-28 12:18:59,697 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-28 13:19:19] 2026-02-28 12:19:14,159 | INFO     | [monitor] cgroup control has ended
[2026-02-28 13:19:19] 2026-02-28 12:19:14,527 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140378139498304)>', '<ExcThread(monitor, started 140377709340416)>']
[2026-02-28 13:19:19] 2026-02-28 12:19:14,775 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-28 13:19:19] 2026-02-28 12:19:14,775 | INFO     | [monitor] control thread has ended
[2026-02-28 13:19:19] 2026-02-28 12:19:19,540 | INFO     | all workflow threads have been joined
[2026-02-28 13:19:19] 2026-02-28 12:19:19,540 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-28 13:19:19] 2026-02-28 12:19:19,540 | INFO     | traces error code: 0
[2026-02-28 13:19:19] 2026-02-28 12:19:19,540 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-28 13:19:19] 2026-02-28 12:19:19,685 [wrapper] ==== pilot stdout END ====
[2026-02-28 13:19:19] 2026-02-28 12:19:19,690 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-28 13:19:19] 2026-02-28 12:19:19,693 [wrapper] pilotpid: 8579
[2026-02-28 13:19:19] 2026-02-28 12:19:19,697 [wrapper] Pilot exit status: 0
[2026-02-28 13:19:19] 2026-02-28 12:19:19,737 [wrapper] pandaids: 7032222961
[2026-02-28 13:19:19] 2026-02-28 12:19:19,798 [wrapper] cleanup supervisor_pilot 18784 8580
[2026-02-28 13:19:19] 2026-02-28 12:19:19,803 [wrapper] Test setup, not cleaning
[2026-02-28 13:19:19] 2026-02-28 12:19:19,808 [wrapper] apfmon messages muted
[2026-02-28 13:19:19] 2026-02-28 12:19:19,813 [wrapper] ==== wrapper stdout END ====
[2026-02-28 13:19:19] 2026-02-28 12:19:19,817 [wrapper] ==== wrapper stderr END ====
[2026-02-28 13:19:19]  *** Error codes and diagnostics ***
[2026-02-28 13:19:19]     "exeErrorCode": 0,
[2026-02-28 13:19:19]     "exeErrorDiag": "",
[2026-02-28 13:19:19]     "pilotErrorCode": 0,
[2026-02-28 13:19:19]     "pilotErrorDiag": "",
[2026-02-28 13:19:19]  *** Listing of results directory ***
[2026-02-28 13:19:19] total 465864
[2026-02-28 13:19:19] -rwx------. 1 boinc boinc     36322 Feb 27 21:39 runpilot2-wrapper.sh
[2026-02-28 13:19:19] -rw-r--r--. 1 boinc boinc      5111 Feb 27 21:42 queuedata.json
[2026-02-28 13:19:19] -rw-r--r--. 1 boinc boinc    584627 Feb 27 21:42 pilot3.tar.gz
[2026-02-28 13:19:19] -rw-r--r--. 1 boinc boinc       100 Feb 28 09:24 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-28 13:19:19] -rwxr-xr-x. 1 boinc boinc      7986 Feb 28 09:24 run_atlas
[2026-02-28 13:19:19] -rw-r--r--. 1 boinc boinc       105 Feb 28 09:24 job.xml
[2026-02-28 13:19:19] -rw-r--r--. 2 boinc boinc 248727580 Feb 28 09:24 EVNT.48451626._000002.pool.root.1
[2026-02-28 13:19:19] -rw-r--r--. 1 boinc boinc      6390 Feb 28 09:24 init_data.xml
[2026-02-28 13:19:19] -rw-r--r--. 2 boinc boinc     15845 Feb 28 09:24 start_atlas.sh
[2026-02-28 13:19:19] drwxrwx--x. 2 boinc boinc        68 Feb 28 09:24 shared
[2026-02-28 13:19:19] -rw-r--r--. 2 boinc boinc    597973 Feb 28 09:24 input.tar.gz
[2026-02-28 13:19:19] -rw-r--r--. 1 boinc boinc         0 Feb 28 09:24 boinc_lockfile
[2026-02-28 13:19:19] -rw-r--r--. 1 boinc boinc      2624 Feb 28 09:24 pandaJob.out
[2026-02-28 13:19:19] -rw-------. 1 boinc boinc    998782 Feb 28 09:25 agis_schedconf.cvmfs.json
[2026-02-28 13:19:19] -rw-------. 1 boinc boinc       415 Feb 28 09:25 workernode_map.json
[2026-02-28 13:19:19] drwx------. 5 boinc boinc      4096 Feb 28 09:25 pilot3
[2026-02-28 13:19:19] -rw-------. 1 boinc boinc 219618575 Feb 28 13:17 HITS.48843720._000048.pool.root.1
[2026-02-28 13:19:19] -rw-r--r--. 1 boinc boinc       532 Feb 28 13:17 boinc_task_state.xml
[2026-02-28 13:19:19] -rw-------. 1 boinc boinc      1014 Feb 28 13:18 memory_monitor_summary.json
[2026-02-28 13:19:19] -rw-------. 1 boinc boinc   1513015 Feb 28 13:18 agis_ddmendpoints.agis.ALL.json
[2026-02-28 13:19:19] -rw-------. 1 boinc boinc    467476 Feb 28 13:18 log.48843720._000048.job.log.tgz.1
[2026-02-28 13:19:19] -rw-------. 1 boinc boinc      6309 Feb 28 13:18 heartbeat.json
[2026-02-28 13:19:19] -rw-------. 1 boinc boinc        95 Feb 28 13:18 pilot_heartbeat.json
[2026-02-28 13:19:19] -rw-r--r--. 1 boinc boinc      8192 Feb 28 13:19 boinc_mmap_file
[2026-02-28 13:19:19] -rw-r--r--. 1 boinc boinc        29 Feb 28 13:19 wrapper_checkpoint.txt
[2026-02-28 13:19:19] -rw-------. 1 boinc boinc      4804 Feb 28 13:19 pilotlog.txt
[2026-02-28 13:19:19] -rw-------. 1 boinc boinc   1925542 Feb 28 13:19 log.48843720._000048.job.log.1
[2026-02-28 13:19:19] -rw-------. 1 boinc boinc       357 Feb 28 13:19 output.list
[2026-02-28 13:19:19] -rw-r--r--. 1 boinc boinc       620 Feb 28 13:19 runtime_log
[2026-02-28 13:19:19] -rw-------. 1 boinc boinc   2406400 Feb 28 13:19 result.tar.gz
[2026-02-28 13:19:19] -rw-------. 1 boinc boinc       656 Feb 28 13:19 yZSNDmqnJG9n9Rq4apOajLDm4fhM0noT9bVooX4SDmR43KDmeOjgfn.diag
[2026-02-28 13:19:19] -rw-r--r--. 1 boinc boinc      8816 Feb 28 13:19 runtime_log.err
[2026-02-28 13:19:19] -rw-r--r--. 1 boinc boinc     20748 Feb 28 13:19 stderr.txt
[2026-02-28 13:19:19] HITS file was successfully produced:
[2026-02-28 13:19:20] -rw-------. 1 boinc boinc 219618575 Feb 28 13:17 shared/HITS.pool.root.1
[2026-02-28 13:19:20]  *** Contents of shared directory: ***
[2026-02-28 13:19:20] total 460324
[2026-02-28 13:19:20] -rw-r--r--. 2 boinc boinc 248727580 Feb 28 09:24 ATLAS.root_0
[2026-02-28 13:19:20] -rw-r--r--. 2 boinc boinc     15845 Feb 28 09:24 start_atlas.sh
[2026-02-28 13:19:20] -rw-r--r--. 2 boinc boinc    597973 Feb 28 09:24 input.tar.gz
[2026-02-28 13:19:20] -rw-------. 1 boinc boinc 219618575 Feb 28 13:17 HITS.pool.root.1
[2026-02-28 13:19:20] -rw-------. 1 boinc boinc   2406400 Feb 28 13:19 result.tar.gz
13:19:21 (4517): run_atlas exited; CPU time 105597.541405
13:19:21 (4517): called boinc_finish(0)

</stderr_txt>
]]>

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