Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
13:40:29 (833976): wrapper (7.7.26015): starting
13:40:29 (833976): wrapper: running run_atlas (--nthreads 3)
[2026-03-01 13:40:29] Arguments: --nthreads 3
[2026-03-01 13:40:29] Threads: 3
[2026-03-01 13:40:29] Checking for CVMFS
[2026-03-01 13:40:29] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-01 13:40:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-01 13:40:30] Running cvmfs_config stat atlas.cern.ch
[2026-03-01 13:40:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-01 13:40:30] 2.9.2.0 77542 5615 82684 156770 1 50 22947556 36864001 0 130560 0 1981496 99.978 229471 17652 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-03-01 13:40:30] CVMFS is ok
[2026-03-01 13:40:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-01 13:40:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-01 13:40:30] Further information can be found at the LHC@home message board.
[2026-03-01 13:40:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-01 13:40:30] Checking for apptainer binary...
[2026-03-01 13:40:30] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-01 13:40:30] Running /usr/bin/apptainer --version
[2026-03-01 13:40:30] apptainer version 1.4.1-1.1
[2026-03-01 13:40:30] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-01 13:40:30] thA312
[2026-03-01 13:40:30] apptainer works
[2026-03-01 13:40:30] Set ATHENA_PROC_NUMBER=3
[2026-03-01 13:40:30] Set ATHENA_CORE_NUMBER=3
[2026-03-01 13:40:30] Starting ATLAS job with PandaID=7032082217
[2026-03-01 13:40:30] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-01 16:29:08]  *** The last 200 lines of the pilot log: ***
[2026-03-01 16:29:08] NAME="CentOS Linux"
[2026-03-01 16:29:08] VERSION="7 (Core)"
[2026-03-01 16:29:08] ID="centos"
[2026-03-01 16:29:08] ID_LIKE="rhel fedora"
[2026-03-01 16:29:08] VERSION_ID="7"
[2026-03-01 16:29:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-01 16:29:08] ANSI_COLOR="0;31"
[2026-03-01 16:29:08] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-01 16:29:08] HOME_URL="https://www.centos.org/"
[2026-03-01 16:29:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-01 16:29:08] 
[2026-03-01 16:29:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-01 16:29:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-01 16:29:08] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-01 16:29:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-01 16:29:08] 
[2026-03-01 16:29:08] 2026-03-01 15:28:37,007 | INFO     | **************************************
[2026-03-01 16:29:08] 2026-03-01 15:28:37,441 | WARNING  | process 842447 can no longer be monitored (due to stat problems) - aborting
[2026-03-01 16:29:08] 2026-03-01 15:28:37,475 | INFO     | using path: /local/data/boinc/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-01 16:29:08] 2026-03-01 15:28:37,509 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-03-01 16:29:08] 2026-03-01 15:28:37,520 | INFO     | sufficient remaining disk space (334399275008 B)
[2026-03-01 16:29:08] 2026-03-01 15:28:37,520 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-01 16:29:08] 2026-03-01 15:28:37,520 | INFO     | current server update state: UPDATING_FINAL
[2026-03-01 16:29:08] 2026-03-01 15:28:37,520 | INFO     | update_server=False
[2026-03-01 16:29:08] 2026-03-01 15:28:37,520 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-01 16:29:08] 2026-03-01 15:28:37,520 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-01 16:29:08] 2026-03-01 15:28:37,520 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-01 16:29:08] 2026-03-01 15:28:37,523 | INFO     | number of running child processes to parent process 842447: 1
[2026-03-01 16:29:08] 2026-03-01 15:28:37,523 | INFO     | maximum number of monitored processes: 6
[2026-03-01 16:29:08] 2026-03-01 15:28:37,523 | INFO     | aborting job monitoring since job object (job id=7032082217) has expired
[2026-03-01 16:29:08] 2026-03-01 15:28:37,523 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-01 16:29:08] 2026-03-01 15:28:37,523 | INFO     | will abort loop
[2026-03-01 16:29:08] 2026-03-01 15:28:37,536 | INFO     | all payload control threads have been joined
[2026-03-01 16:29:08] 2026-03-01 15:28:37,644 | INFO     | all data control threads have been joined
[2026-03-01 16:29:08] 2026-03-01 15:28:38,397 | INFO     | all job control threads have been joined
[2026-03-01 16:29:08] 2026-03-01 15:28:38,406 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-01 16:29:08] 2026-03-01 15:28:38,526 | INFO     | [job] retrieve thread has finished
[2026-03-01 16:29:08] 2026-03-01 15:28:38,526 | INFO     | [job] queue monitor thread has finished
[2026-03-01 16:29:08] 2026-03-01 15:28:38,529 | INFO     | [job] job monitor thread has finished
[2026-03-01 16:29:08] 2026-03-01 15:28:38,541 | INFO     | [payload] control thread has finished
[2026-03-01 16:29:08] 2026-03-01 15:28:38,581 | INFO     | [data] copytool_in thread has finished
[2026-03-01 16:29:08] 2026-03-01 15:28:38,649 | INFO     | [data] control thread has finished
[2026-03-01 16:29:08] 2026-03-01 15:28:38,873 | INFO     | [payload] execute_payloads thread has finished
[2026-03-01 16:29:08] 2026-03-01 15:28:39,301 | INFO     | [payload] validate_post thread has finished
[2026-03-01 16:29:08] 2026-03-01 15:28:39,403 | INFO     | [job] control thread has finished
[2026-03-01 16:29:08] 2026-03-01 15:28:39,632 | INFO     | [job] validate thread has finished
[2026-03-01 16:29:08] 2026-03-01 15:28:39,748 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-01 16:29:08] 2026-03-01 15:28:39,751 | INFO     | [job] create_data_payload thread has finished
[2026-03-01 16:29:08] 2026-03-01 15:28:39,761 | INFO     | [payload] validate_pre thread has finished
[2026-03-01 16:29:08] 2026-03-01 15:28:39,900 | INFO     | [payload] failed_post thread has finished
[2026-03-01 16:29:08] 2026-03-01 15:28:40,412 | INFO     | [data] copytool_out thread has finished
[2026-03-01 16:29:08] 2026-03-01 15:28:41,527 | INFO     | [data] queue_monitor thread has finished
[2026-03-01 16:29:08] 2026-03-01 15:28:51,719 | INFO     | [monitor] cgroup control has ended
[2026-03-01 16:29:08] 2026-03-01 15:28:53,194 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139715964589888)>', '<ExcThread(monitor, started 139715319674624)>']
[2026-03-01 16:29:08] 2026-03-01 15:28:58,220 | INFO     | all workflow threads have been joined
[2026-03-01 16:29:08] 2026-03-01 15:28:58,220 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-01 16:29:08] 2026-03-01 15:28:58,221 | INFO     | traces error code: 0
[2026-03-01 16:29:08] 2026-03-01 15:28:58,221 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-01 16:29:08] 2026-03-01 15:29:08,073 | INFO     | PID=838020 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-01 16:29:08] 2026-03-01 15:29:08,073 | INFO     | found 0 job(s) in 20 queues
[2026-03-01 16:29:08] 2026-03-01 15:29:08,073 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-01 16:29:08] 2026-03-01 15:29:08,073 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-01 16:29:08] 2026-03-01 15:29:08,073 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-01 16:29:08] 2026-03-01 15:29:08,073 | INFO     | [monitor] control thread has ended
[2026-03-01 16:29:08] 2026-03-01 15:29:08,119 [wrapper] ==== pilot stdout END ====
[2026-03-01 16:29:08] 2026-03-01 15:29:08,122 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-01 16:29:08] 2026-03-01 15:29:08,124 [wrapper] pilotpid: 838020
[2026-03-01 16:29:08] 2026-03-01 15:29:08,126 [wrapper] Pilot exit status: 0
[2026-03-01 16:29:08] 2026-03-01 15:29:08,134 [wrapper] pandaids: 7032082217
[2026-03-01 16:29:08] 2026-03-01 15:29:08,150 [wrapper] cleanup supervisor_pilot  849959 838021
[2026-03-01 16:29:08] 2026-03-01 15:29:08,153 [wrapper] Test setup, not cleaning
[2026-03-01 16:29:08] 2026-03-01 15:29:08,155 [wrapper] apfmon messages muted
[2026-03-01 16:29:08] 2026-03-01 15:29:08,157 [wrapper] ==== wrapper stdout END ====
[2026-03-01 16:29:08] 2026-03-01 15:29:08,160 [wrapper] ==== wrapper stderr END ====
[2026-03-01 16:29:08]  *** Error codes and diagnostics ***
[2026-03-01 16:29:08]     "exeErrorCode": 0,
[2026-03-01 16:29:08]     "exeErrorDiag": "",
[2026-03-01 16:29:08]     "pilotErrorCode": 0,
[2026-03-01 16:29:08]     "pilotErrorDiag": "",
[2026-03-01 16:29:08]  *** Listing of results directory ***
[2026-03-01 16:29:08] total 525916
[2026-03-01 16:29:08] -rw-r--r-- 1 boinc boinc    584627 Feb 27 21:35 pilot3.tar.gz
[2026-03-01 16:29:08] -rwx------ 1 boinc boinc     36322 Feb 27 21:36 runpilot2-wrapper.sh
[2026-03-01 16:29:08] -rw-r--r-- 1 boinc boinc      5111 Feb 27 21:38 queuedata.json
[2026-03-01 16:29:08] -rw-r--r-- 1 boinc boinc       100 Mar  1 13:40 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-01 16:29:08] -rwxr-xr-x 1 boinc boinc      7986 Mar  1 13:40 run_atlas
[2026-03-01 16:29:08] -rw-r--r-- 1 boinc boinc       105 Mar  1 13:40 job.xml
[2026-03-01 16:29:08] -rw-r--r-- 2 boinc boinc 271798593 Mar  1 13:40 EVNT.48450967._000003.pool.root.1
[2026-03-01 16:29:08] -rw-r--r-- 2 boinc boinc    597978 Mar  1 13:40 input.tar.gz
[2026-03-01 16:29:08] -rw-r--r-- 2 boinc boinc     15845 Mar  1 13:40 start_atlas.sh
[2026-03-01 16:29:08] drwxrwx--x 2 boinc boinc      4096 Mar  1 13:40 shared
[2026-03-01 16:29:08] -rw-r--r-- 1 boinc boinc         0 Mar  1 13:40 boinc_setup_complete
[2026-03-01 16:29:08] -rw-r--r-- 1 boinc boinc      6439 Mar  1 13:40 init_data.xml
[2026-03-01 16:29:08] -rw-r--r-- 1 boinc boinc         0 Mar  1 13:40 boinc_lockfile
[2026-03-01 16:29:08] -rw-r--r-- 1 boinc boinc      2611 Mar  1 13:40 pandaJob.out
[2026-03-01 16:29:08] -rw------- 1 boinc boinc    998184 Mar  1 13:40 agis_schedconf.cvmfs.json
[2026-03-01 16:29:08] -rw------- 1 boinc boinc   1513015 Mar  1 13:40 agis_ddmendpoints.agis.ALL.json
[2026-03-01 16:29:08] -rw------- 1 boinc boinc       427 Mar  1 13:40 workernode_map.json
[2026-03-01 16:29:08] drwx------ 5 boinc boinc      4096 Mar  1 13:40 pilot3
[2026-03-01 16:29:08] -rw-r--r-- 1 boinc boinc       530 Mar  1 16:28 boinc_task_state.xml
[2026-03-01 16:29:08] -rw------- 1 boinc boinc 259306408 Mar  1 16:28 HITS.48843429._000070.pool.root.1
[2026-03-01 16:29:08] -rw------- 1 boinc boinc      1021 Mar  1 16:28 memory_monitor_summary.json
[2026-03-01 16:29:08] -rw------- 1 boinc boinc        95 Mar  1 16:28 pilot_heartbeat.json
[2026-03-01 16:29:08] -rw------- 1 boinc boinc    333091 Mar  1 16:28 log.48843429._000070.job.log.tgz.1
[2026-03-01 16:29:08] -rw------- 1 boinc boinc      6309 Mar  1 16:28 heartbeat.json
[2026-03-01 16:29:08] -rw-r--r-- 1 boinc boinc      8192 Mar  1 16:28 boinc_mmap_file
[2026-03-01 16:29:08] -rw-r--r-- 1 boinc boinc        28 Mar  1 16:28 wrapper_checkpoint.txt
[2026-03-01 16:29:08] -rw------- 1 boinc boinc       746 Mar  1 16:29 pilotlog.txt
[2026-03-01 16:29:08] -rw------- 1 boinc boinc   1426658 Mar  1 16:29 log.48843429._000070.job.log.1
[2026-03-01 16:29:08] -rw------- 1 boinc boinc       357 Mar  1 16:29 output.list
[2026-03-01 16:29:08] -rw-r--r-- 1 boinc boinc       620 Mar  1 16:29 runtime_log
[2026-03-01 16:29:08] -rw------- 1 boinc boinc   1781760 Mar  1 16:29 result.tar.gz
[2026-03-01 16:29:08] -rw-r--r-- 1 boinc boinc      8897 Mar  1 16:29 runtime_log.err
[2026-03-01 16:29:08] -rw------- 1 boinc boinc       660 Mar  1 16:29 L0dNDmvkJG9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmQi5KDmJXZCxn.diag
[2026-03-01 16:29:08] -rw-r--r-- 1 boinc boinc      9333 Mar  1 16:29 stderr.txt
[2026-03-01 16:29:08] HITS file was successfully produced:
[2026-03-01 16:29:08] -rw------- 1 boinc boinc 259306408 Mar  1 16:28 shared/HITS.pool.root.1
[2026-03-01 16:29:08]  *** Contents of shared directory: ***
[2026-03-01 16:29:08] total 521008
[2026-03-01 16:29:08] -rw-r--r-- 2 boinc boinc 271798593 Mar  1 13:40 ATLAS.root_0
[2026-03-01 16:29:08] -rw-r--r-- 2 boinc boinc    597978 Mar  1 13:40 input.tar.gz
[2026-03-01 16:29:08] -rw-r--r-- 2 boinc boinc     15845 Mar  1 13:40 start_atlas.sh
[2026-03-01 16:29:08] -rw------- 1 boinc boinc 259306408 Mar  1 16:28 HITS.pool.root.1
[2026-03-01 16:29:08] -rw------- 1 boinc boinc   1781760 Mar  1 16:29 result.tar.gz
16:29:29 (833976): run_atlas exited; CPU time 29447.972034
16:29:29 (833976): called boinc_finish(0)

</stderr_txt>
]]>

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