Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
20:29:12 (508236): wrapper (7.7.26015): starting
20:29:12 (508236): wrapper: running run_atlas (--nthreads 4)
[2026-03-01 20:29:12] Arguments: --nthreads 4
[2026-03-01 20:29:12] Threads: 4
[2026-03-01 20:29:12] Checking for CVMFS
[2026-03-01 20:29:12] No cvmfs_config command found, will try listing directly
[2026-03-01 20:29:12] CVMFS is ok
[2026-03-01 20:29:12] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-01 20:29:12] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-01 20:29:12] Further information can be found at the LHC@home message board.
[2026-03-01 20:29:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-01 20:29:12] Checking for apptainer binary...
[2026-03-01 20:29:12] which: no apptainer in ((null))
[2026-03-01 20:29:12] apptainer is not installed, using version from CVMFS
[2026-03-01 20:29:12] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-01 20:29:12] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot96/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut16.grid.cesnet.cz
[2026-03-01 20:29:12] apptainer works
[2026-03-01 20:29:12] Set ATHENA_PROC_NUMBER=4
[2026-03-01 20:29:12] Set ATHENA_CORE_NUMBER=4
[2026-03-01 20:29:12] Starting ATLAS job with PandaID=7031990114
[2026-03-01 20:29:12] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot96/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-01 23:49:19]  *** The last 200 lines of the pilot log: ***
[2026-03-01 23:49:19] 2026-03-01 22:33:19,357 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-01 23:49:19] 2026-03-01 22:33:19,357 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-01 23:49:19] 2026-03-01 22:33:19,361 | INFO     | fitting pss+swap vs Time
[2026-03-01 23:49:19] 2026-03-01 22:33:19,361 | INFO     | sum of square deviations: 1838657730.0
[2026-03-01 23:49:19] 2026-03-01 22:33:19,362 | INFO     | sum of deviations: -4630415144.999997
[2026-03-01 23:49:19] 2026-03-01 22:33:19,362 | INFO     | mean x: 1772398892.0
[2026-03-01 23:49:19] 2026-03-01 22:33:19,363 | INFO     | mean y: 2355389.6795580112
[2026-03-01 23:49:19] 2026-03-01 22:33:19,363 | INFO     | intersect: 4465906456.62991
[2026-03-01 23:49:19] 2026-03-01 22:33:19,363 | INFO     | chi2: 2.0168242751322114
[2026-03-01 23:49:19] 2026-03-01 22:33:19,363 | INFO     | sum of square deviations: 1690450300.0
[2026-03-01 23:49:19] 2026-03-01 22:33:19,364 | INFO     | sum of deviations: 5874684696.500001
[2026-03-01 23:49:19] 2026-03-01 22:33:19,365 | INFO     | mean x: 1772398739.5
[2026-03-01 23:49:19] 2026-03-01 22:33:19,365 | INFO     | mean y: 2365957.7556818184
[2026-03-01 23:49:19] 2026-03-01 22:33:19,365 | INFO     | intersect: -6157107497.948128
[2026-03-01 23:49:19] 2026-03-01 22:33:19,365 | INFO     | chi2: 1.3586670392876936
[2026-03-01 23:49:19] 2026-03-01 22:33:19,365 | INFO     | current chi2=1.3586670392876936 (change=32.63334559979812 %)
[2026-03-01 23:49:19] 2026-03-01 22:33:19,366 | INFO     | sum of square deviations: 1550429070.0
[2026-03-01 23:49:19] 2026-03-01 22:33:19,367 | INFO     | sum of deviations: 5711272863.999996
[2026-03-01 23:49:19] 2026-03-01 22:33:19,367 | INFO     | mean x: 1772398587.0
[2026-03-01 23:49:19] 2026-03-01 22:33:19,367 | INFO     | mean y: 2365779.730994152
[2026-03-01 23:49:19] 2026-03-01 22:33:19,367 | INFO     | intersect: -6526570080.666048
[2026-03-01 23:49:19] 2026-03-01 22:33:19,367 | INFO     | chi2: 1.3593202812430523
[2026-03-01 23:49:19] 2026-03-01 22:33:19,367 | INFO     | current chi2=1.3593202812430523 (change=-0.048079620427174445 %)
[2026-03-01 23:49:19] 2026-03-01 22:33:19,368 | INFO     | right removable region: 170
[2026-03-01 23:49:19] 2026-03-01 22:33:19,368 | INFO     | sum of square deviations: 1690450300.0
[2026-03-01 23:49:19] 2026-03-01 22:33:19,369 | INFO     | sum of deviations: -27318948667.5
[2026-03-01 23:49:19] 2026-03-01 22:33:19,369 | INFO     | mean x: 1772399044.5
[2026-03-01 23:49:19] 2026-03-01 22:33:19,369 | INFO     | mean y: 2378395.5738636362
[2026-03-01 23:49:19] 2026-03-01 22:33:19,369 | INFO     | intersect: 28645680428.77859
[2026-03-01 23:49:19] 2026-03-01 22:33:19,370 | INFO     | chi2: 0.7177315215997395
[2026-03-01 23:49:19] 2026-03-01 22:33:19,370 | INFO     | current chi2=0.7177315215997395 (change=64.4127884392561 %)
[2026-03-01 23:49:19] 2026-03-01 22:33:19,370 | INFO     | sum of square deviations: 1550429070.0
[2026-03-01 23:49:19] 2026-03-01 22:33:19,371 | INFO     | sum of deviations: -25643692339.0
[2026-03-01 23:49:19] 2026-03-01 22:33:19,371 | INFO     | mean x: 1772399197.0
[2026-03-01 23:49:19] 2026-03-01 22:33:19,372 | INFO     | mean y: 2376563.678362573
[2026-03-01 23:49:19] 2026-03-01 22:33:19,372 | INFO     | intersect: 29317396895.28157
[2026-03-01 23:49:19] 2026-03-01 22:33:19,372 | INFO     | chi2: 0.7178244414594047
[2026-03-01 23:49:19] 2026-03-01 22:33:19,372 | INFO     | current chi2=0.7178244414594047 (change=-0.012946325592345383 %)
[2026-03-01 23:49:19] 2026-03-01 22:33:19,372 | INFO     | left removable region: 20
[2026-03-01 23:49:19] 2026-03-01 22:33:19,372 | INFO     | sum of square deviations: 1046484737.5
[2026-03-01 23:49:19] 2026-03-01 22:33:19,373 | INFO     | sum of deviations: -10476221313.0
[2026-03-01 23:49:19] 2026-03-01 22:33:19,373 | INFO     | mean x: 1772399166.5
[2026-03-01 23:49:19] 2026-03-01 22:33:19,373 | INFO     | mean y: 2383289.6933333334
[2026-03-01 23:49:19] 2026-03-01 22:33:19,374 | INFO     | intersect: 17745638645.322193
[2026-03-01 23:49:19] 2026-03-01 22:33:19,374 | INFO     | chi2: 0.03589939207568925
[2026-03-01 23:49:19] 2026-03-01 22:33:19,374 | INFO     | current memory leak: -10.01 B/s (using 150 data points, chi2=0.04)
[2026-03-01 23:49:19] 2026-03-01 22:33:19,374 | INFO     | could have reported an average CPU frequency of 2691 MHz (10 samples)
[2026-03-01 23:49:19] 2026-03-01 22:33:19,375 | INFO     | ..............................
[2026-03-01 23:49:19] 2026-03-01 22:33:19,375 | INFO     | . Timing measurements:
[2026-03-01 23:49:19] 2026-03-01 22:33:19,375 | INFO     | . get job = 0 s
[2026-03-01 23:49:19] 2026-03-01 22:33:19,375 | INFO     | . initial setup = 8 s
[2026-03-01 23:49:19] 2026-03-01 22:33:19,375 | INFO     | . payload setup = 9 s
[2026-03-01 23:49:19] 2026-03-01 22:33:19,375 | INFO     | . stage-in = 0 s
[2026-03-01 23:49:19] 2026-03-01 22:33:19,375 | INFO     | . payload execution = 10998 s
[2026-03-01 23:49:19] 2026-03-01 22:33:19,375 | INFO     | . stage-out = 1 s
[2026-03-01 23:49:19] 2026-03-01 22:33:19,375 | INFO     | . log creation = 0 s
[2026-03-01 23:49:19] 2026-03-01 22:33:19,375 | INFO     | ..............................
[2026-03-01 23:49:19] 2026-03-01 22:33:19,467 | INFO     | 
[2026-03-01 23:49:19] 2026-03-01 22:33:19,467 | INFO     | job summary report
[2026-03-01 23:49:19] 2026-03-01 22:33:19,468 | INFO     | --------------------------------------------------
[2026-03-01 23:49:19] 2026-03-01 22:33:19,468 | INFO     | PanDA job id: 7031990114
[2026-03-01 23:49:19] 2026-03-01 22:33:19,468 | INFO     | task id: 48838416
[2026-03-01 23:49:19] 2026-03-01 22:33:19,468 | INFO     | errors: (none)
[2026-03-01 23:49:19] 2026-03-01 22:33:19,468 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-01 23:49:19] 2026-03-01 22:33:19,468 | INFO     | pilot state: finished 
[2026-03-01 23:49:19] 2026-03-01 22:33:19,468 | INFO     | transexitcode: 0
[2026-03-01 23:49:19] 2026-03-01 22:33:19,468 | INFO     | exeerrorcode: 0
[2026-03-01 23:49:19] 2026-03-01 22:33:19,468 | INFO     | exeerrordiag: 
[2026-03-01 23:49:19] 2026-03-01 22:33:19,469 | INFO     | exitcode: 0
[2026-03-01 23:49:19] 2026-03-01 22:33:19,469 | INFO     | exitmsg: OK
[2026-03-01 23:49:19] 2026-03-01 22:33:19,469 | INFO     | cpuconsumptiontime: 42060 s
[2026-03-01 23:49:19] 2026-03-01 22:33:19,469 | INFO     | nevents: 400
[2026-03-01 23:49:19] 2026-03-01 22:33:19,469 | INFO     | neventsw: 0
[2026-03-01 23:49:19] 2026-03-01 22:33:19,469 | INFO     | pid: 524623
[2026-03-01 23:49:19] 2026-03-01 22:33:19,469 | INFO     | pgrp: 524623
[2026-03-01 23:49:19] 2026-03-01 22:33:19,469 | INFO     | corecount: 4
[2026-03-01 23:49:19] 2026-03-01 22:33:19,469 | INFO     | event service: False
[2026-03-01 23:49:19] 2026-03-01 22:33:19,469 | INFO     | sizes: {0: 2281857, 1: 2282318, 12: 2282318, 11010: 2311906, 11011: 2311905, 11012: 2320981, 11013: 2321359}
[2026-03-01 23:49:19] 2026-03-01 22:33:19,470 | INFO     | --------------------------------------------------
[2026-03-01 23:49:19] 2026-03-01 22:33:19,470 | INFO     | 
[2026-03-01 23:49:19] 2026-03-01 22:33:19,470 | INFO     | executing command: ls -lF /scratch/boinc/var/slot96/slots/0
[2026-03-01 23:49:19] 2026-03-01 22:33:19,498 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-01 23:49:19] 2026-03-01 22:33:19,498 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-01 23:49:19] 2026-03-01 22:33:19,499 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-01 23:49:19] 2026-03-01 22:33:19,499 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-01 23:49:19] 2026-03-01 22:33:19,499 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-01 23:49:19] 2026-03-01 22:33:19,499 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-01 23:49:19] 2026-03-01 22:33:19,499 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-01 23:49:19] 2026-03-01 22:33:19,499 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-01 23:49:19] 2026-03-01 22:33:19,499 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-01 23:49:19] 2026-03-01 22:33:19,499 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-01 23:49:19] 2026-03-01 22:33:19,499 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-01 23:49:19] 2026-03-01 22:33:19,499 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-01 23:49:19] 2026-03-01 22:33:19,500 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-01 23:49:19] 2026-03-01 22:33:19,500 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-01 23:49:19] 2026-03-01 22:33:19,500 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-01 23:49:19] 2026-03-01 22:33:19,500 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-01 23:49:19] 2026-03-01 22:33:19,500 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-01 23:49:19] 2026-03-01 22:33:19,500 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-01 23:49:19] 2026-03-01 22:33:19,500 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-01 23:49:19] 2026-03-01 22:33:19,500 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-01 23:49:19] 2026-03-01 22:33:19,500 | INFO     | job 7031990114 has completed (purged errors)
[2026-03-01 23:49:19] 2026-03-01 22:33:19,501 | INFO     | overall cleanup function is called
[2026-03-01 23:49:19] 2026-03-01 22:33:20,508 | INFO     | --- collectZombieJob: --- 10, [524623]
[2026-03-01 23:49:19] 2026-03-01 22:33:20,509 | INFO     | zombie collector waiting for pid 524623
[2026-03-01 23:49:19] 2026-03-01 22:33:20,509 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-01 23:49:19] 2026-03-01 22:33:20,509 | INFO     | collected zombie processes
[2026-03-01 23:49:19] 2026-03-01 22:33:20,509 | INFO     | will attempt to kill all subprocesses of pid=524623
[2026-03-01 23:49:19] 2026-03-01 22:33:21,351 | INFO     | process IDs to be killed: [524623] (in reverse order)
[2026-03-01 23:49:19] 2026-03-01 22:33:21,663 | WARNING  | found no corresponding commands to process id(s)
[2026-03-01 23:49:19] 2026-03-01 22:33:21,663 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-01 23:49:19] 2026-03-01 22:33:21,698 | INFO     | did not find any defunct processes belonging to 524623
[2026-03-01 23:49:19] 2026-03-01 22:33:21,731 | INFO     | did not find any defunct processes belonging to 524623
[2026-03-01 23:49:19] 2026-03-01 22:33:21,731 | INFO     | ready for new job
[2026-03-01 23:49:19] 2026-03-01 22:33:21,731 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-01 23:49:19] 2026-03-01 22:33:21,734 | INFO     | **************************************
[2026-03-01 23:49:19] 2026-03-01 22:33:21,734 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-01 23:49:19] 2026-03-01 22:33:21,734 | INFO     | **************************************
[2026-03-01 23:49:19] 2026-03-01 22:33:21,734 | INFO     | 
[2026-03-01 23:49:19] 2026-03-01 22:33:21,743 | INFO     | architecture information:
[2026-03-01 23:49:19] 2026-03-01 22:33:21,743 | INFO     | executing command: cat /etc/os-release
[2026-03-01 23:49:19] 2026-03-01 22:33:21,765 | INFO     | cat /etc/os-release:
[2026-03-01 23:49:19] NAME="CentOS Linux"
[2026-03-01 23:49:19] VERSION="7 (Core)"
[2026-03-01 23:49:19] ID="centos"
[2026-03-01 23:49:19] ID_LIKE="rhel fedora"
[2026-03-01 23:49:19] VERSION_ID="7"
[2026-03-01 23:49:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-01 23:49:19] ANSI_COLOR="0;31"
[2026-03-01 23:49:19] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-01 23:49:19] HOME_URL="https://www.centos.org/"
[2026-03-01 23:49:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-01 23:49:19] 
[2026-03-01 23:49:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-01 23:49:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-01 23:49:19] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-01 23:49:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-01 23:49:19] 
[2026-03-01 23:49:19] 2026-03-01 22:33:21,766 | INFO     | **************************************
[2026-03-01 23:49:19] 2026-03-01 22:33:22,269 | INFO     | executing command: df -mP /scratch/boinc/var/slot96/slots/0
[2026-03-01 23:49:19] 2026-03-01 22:33:22,292 | INFO     | sufficient remaining disk space (3318627696640 B)
[2026-03-01 23:49:19] 2026-03-01 22:33:22,293 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-01 23:49:19] 2026-03-01 22:33:22,293 | INFO     | current server update state: UPDATING_FINAL
[2026-03-01 23:49:19] 2026-03-01 22:33:22,293 | INFO     | update_server=False
[2026-03-01 23:49:19] 2026-03-01 22:33:22,293 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-01 23:49:19] 2026-03-01 22:33:22,482 | INFO     | all data control threads have been joined
[2026-03-01 23:49:19] 2026-03-01 22:33:22,563 | INFO     | all payload control threads have been joined
[2026-03-01 23:49:19] 2026-03-01 22:33:22,893 | INFO     | all job control threads have been joined
[2026-03-01 23:49:19] 2026-03-01 22:33:23,299 | INFO     | [job] retrieve thread has finished
[2026-03-01 23:49:19] 2026-03-01 22:33:23,363 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-01 23:49:19] 2026-03-01 22:33:23,479 | INFO     | [payload] execute_payloads thread has finished
[2026-03-01 23:49:19] 2026-03-01 22:33:23,487 | INFO     | [data] control thread has finished
[2026-03-01 23:49:19] 2026-03-01 22:33:23,568 | INFO     | [payload] control thread has finished
[2026-03-01 23:49:19] 2026-03-01 22:33:23,643 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-01 23:49:19] 2026-03-01 22:33:23,666 | INFO     | [payload] failed_post thread has finished
[2026-03-01 23:49:19] 2026-03-01 22:33:23,693 | WARNING  | process 524623 can no longer be monitored (due to stat problems) - aborting
[2026-03-01 23:49:19] 2026-03-01 22:33:23,731 | INFO     | [data] copytool_in thread has finished
[2026-03-01 23:49:19] 2026-03-01 22:33:23,899 | INFO     | [job] control thread has finished
[2026-03-01 23:49:19] 2026-03-01 22:33:24,289 | INFO     | [job] validate thread has finished
[2026-03-01 23:49:19] 2026-03-01 22:33:24,325 | INFO     | using path: /scratch/boinc/var/slot96/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-01 23:49:19] 2026-03-01 22:33:24,326 | INFO     | reaping zombies for max 20 seconds
[2026-03-01 23:49:19] 2026-03-01 22:33:24,335 | INFO     | [payload] validate_post thread has finished
[2026-03-01 23:49:19] 2026-03-01 22:33:24,349 | INFO     | checking for looping job (in state=finished)
[2026-03-01 23:49:19] 2026-03-01 22:33:24,349 | INFO     | using looping job limit: 7200 s
[2026-03-01 23:49:19] 2026-03-01 22:33:24,442 | INFO     | [job] create_data_payload thread has finished
[2026-03-01 23:49:19] 2026-03-01 22:33:24,478 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-01 23:49:19] 2026-03-01 22:33:24,727 | INFO     | [payload] validate_pre thread has finished
[2026-03-01 23:49:19] 2026-03-01 22:33:25,197 | INFO     | number of running child processes to parent process 524623: 1
[2026-03-01 23:49:19] 2026-03-01 22:33:25,197 | INFO     | maximum number of monitored processes: 6
[2026-03-01 23:49:19] 2026-03-01 22:33:25,198 | INFO     | aborting job monitoring since job object (job id=7031990114) has expired
[2026-03-01 23:49:19] 2026-03-01 22:33:25,198 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-01 23:49:19] 2026-03-01 22:33:25,198 | INFO     | will abort loop
[2026-03-01 23:49:19] 2026-03-01 22:33:25,334 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-01 23:49:19] 2026-03-01 22:33:25,479 | INFO     | [job] queue monitor thread has finished
[2026-03-01 23:49:19] 2026-03-01 22:33:25,649 | INFO     | [data] copytool_out thread has finished
[2026-03-01 23:49:19] 2026-03-01 22:33:26,203 | INFO     | [job] job monitor thread has finished
[2026-03-01 23:49:19] 2026-03-01 22:33:29,340 | INFO     | [data] queue_monitor thread has finished
[2026-03-01 23:49:19] 2026-03-01 22:33:51,689 | INFO     | [monitor] cgroup control has ended
[2026-03-01 23:49:19] 2026-03-01 22:33:52,171 | INFO     | PID=514123 has CPU usage=13.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-01 23:49:19] 2026-03-01 22:33:52,172 | INFO     | .. there are 10 such processes running
[2026-03-01 23:49:19] 2026-03-01 22:33:52,173 | INFO     | found 0 job(s) in 20 queues
[2026-03-01 23:49:19] 2026-03-01 22:33:52,173 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-01 23:49:19] 2026-03-01 22:33:52,173 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-01 23:49:19] 2026-03-01 22:33:53,404 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22426308126528)>', '<ExcThread(monitor, started 22426072401664)>']
[2026-03-01 23:49:19] 2026-03-01 22:33:54,178 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-01 23:49:19] 2026-03-01 22:33:54,179 | INFO     | [monitor] control thread has ended
[2026-03-01 23:49:19] 2026-03-01 22:33:58,429 | INFO     | all workflow threads have been joined
[2026-03-01 23:49:19] 2026-03-01 22:33:58,429 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-01 23:49:19] 2026-03-01 22:33:58,429 | INFO     | traces error code: 0
[2026-03-01 23:49:19] 2026-03-01 22:33:58,429 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-01 23:49:19] 2026-03-01 22:33:58,567 [wrapper] ==== pilot stdout END ====
[2026-03-01 23:49:19] 2026-03-01 22:33:58,572 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-01 23:49:19] 2026-03-01 22:33:58,576 [wrapper] pilotpid: 514123
[2026-03-01 23:49:19] 2026-03-01 22:33:58,580 [wrapper] Pilot exit status: 0
[2026-03-01 23:49:19] 2026-03-01 22:33:58,595 [wrapper] pandaids: 7031990114
[2026-03-01 23:49:19] 2026-03-01 22:33:58,812 [wrapper] cleanup supervisor_pilot  737555 514125
[2026-03-01 23:49:19] 2026-03-01 22:33:58,816 [wrapper] Test setup, not cleaning
[2026-03-01 23:49:19] 2026-03-01 22:33:58,820 [wrapper] apfmon messages muted
[2026-03-01 23:49:19] 2026-03-01 22:33:58,825 [wrapper] ==== wrapper stdout END ====
[2026-03-01 23:49:19] 2026-03-01 22:33:58,829 [wrapper] ==== wrapper stderr END ====
[2026-03-01 23:49:19]  *** Error codes and diagnostics ***
[2026-03-01 23:49:19]     "exeErrorCode": 0,
[2026-03-01 23:49:19]     "exeErrorDiag": "",
[2026-03-01 23:49:19]     "pilotErrorCode": 0,
[2026-03-01 23:49:19]     "pilotErrorDiag": "",
[2026-03-01 23:49:19]  *** Listing of results directory ***
[2026-03-01 23:49:19] total 517108
[2026-03-01 23:49:19] -rw-r--r-- 1 boinc boinc    584627 Feb 27 21:35 pilot3.tar.gz
[2026-03-01 23:49:19] -rwx------ 1 boinc boinc     36322 Feb 27 21:39 runpilot2-wrapper.sh
[2026-03-01 23:49:19] -rw-r--r-- 1 boinc boinc      5111 Feb 27 21:42 queuedata.json
[2026-03-01 23:49:19] -rw-r--r-- 1 boinc boinc       100 Mar  1 20:29 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-01 23:49:19] -rwxr-xr-x 1 boinc boinc      7986 Mar  1 20:29 run_atlas
[2026-03-01 23:49:19] -rw-r--r-- 1 boinc boinc       105 Mar  1 20:29 job.xml
[2026-03-01 23:49:19] -rw-r--r-- 2 boinc boinc 293634588 Mar  1 20:29 EVNT.48220085._000322.pool.root.1
[2026-03-01 23:49:19] -rw-r--r-- 1 boinc boinc      6699 Mar  1 20:29 init_data.xml
[2026-03-01 23:49:19] -rw-r--r-- 2 boinc boinc     15845 Mar  1 20:29 start_atlas.sh
[2026-03-01 23:49:19] drwxrwx--x 2 boinc boinc      4096 Mar  1 20:29 shared
[2026-03-01 23:49:19] -rw-r--r-- 2 boinc boinc    597964 Mar  1 20:29 input.tar.gz
[2026-03-01 23:49:19] -rw-r--r-- 1 boinc boinc         0 Mar  1 20:29 boinc_lockfile
[2026-03-01 23:49:19] -rw-r--r-- 1 boinc boinc      2567 Mar  1 20:29 pandaJob.out
[2026-03-01 23:49:19] -rw------- 1 boinc boinc    998184 Mar  1 20:29 agis_schedconf.cvmfs.json
[2026-03-01 23:49:19] -rw------- 1 boinc boinc       443 Mar  1 20:29 workernode_map.json
[2026-03-01 23:49:19] drwx------ 5 boinc boinc      4096 Mar  1 20:29 pilot3
[2026-03-01 23:49:19] -rw------- 1 boinc boinc 228156153 Mar  1 23:32 HITS.48838416._007956.pool.root.1
[2026-03-01 23:49:19] -rw-r--r-- 1 boinc boinc       529 Mar  1 23:32 boinc_task_state.xml
[2026-03-01 23:49:19] -rw------- 1 boinc boinc      1027 Mar  1 23:33 memory_monitor_summary.json
[2026-03-01 23:49:19] -rw------- 1 boinc boinc   1513015 Mar  1 23:33 agis_ddmendpoints.agis.ALL.json
[2026-03-01 23:49:19] -rw------- 1 boinc boinc    363794 Mar  1 23:33 log.48838416._007956.job.log.tgz.1
[2026-03-01 23:49:19] -rw------- 1 boinc boinc      6356 Mar  1 23:33 heartbeat.json
[2026-03-01 23:49:19] -rw------- 1 boinc boinc        95 Mar  1 23:33 pilot_heartbeat.json
[2026-03-01 23:49:19] -rw------- 1 boinc boinc      5584 Mar  1 23:33 pilotlog.txt
[2026-03-01 23:49:19] -rw------- 1 boinc boinc   1532408 Mar  1 23:33 log.48838416._007956.job.log.1
[2026-03-01 23:49:19] -rw------- 1 boinc boinc       357 Mar  1 23:33 output.list
[2026-03-01 23:49:19] -rw-r--r-- 1 boinc boinc       620 Mar  1 23:33 runtime_log
[2026-03-01 23:49:19] -rw------- 1 boinc boinc   1914880 Mar  1 23:33 result.tar.gz
[2026-03-01 23:49:19] -rw-r--r-- 1 boinc boinc      9205 Mar  1 23:33 runtime_log.err
[2026-03-01 23:49:19] -rw------- 1 boinc boinc       665 Mar  1 23:33 aTHLDmQnJG9n9Rq4apOajLDm4fhM0noT9bVooX4SDmkz3KDmPJy9ym.diag
[2026-03-01 23:49:19] -rw-r--r-- 1 boinc boinc        26 Mar  1 23:48 wrapper_checkpoint.txt
[2026-03-01 23:49:19] -rw-r--r-- 1 boinc boinc      8192 Mar  1 23:49 boinc_mmap_file
[2026-03-01 23:49:19] -rw-r--r-- 1 boinc boinc     20841 Mar  1 23:49 stderr.txt
[2026-03-01 23:49:19] HITS file was successfully produced:
[2026-03-01 23:49:19] -rw------- 1 boinc boinc 228156153 Mar  1 23:32 shared/HITS.pool.root.1
[2026-03-01 23:49:19]  *** Contents of shared directory: ***
[2026-03-01 23:49:19] total 512048
[2026-03-01 23:49:19] -rw-r--r-- 2 boinc boinc 293634588 Mar  1 20:29 ATLAS.root_0
[2026-03-01 23:49:19] -rw-r--r-- 2 boinc boinc     15845 Mar  1 20:29 start_atlas.sh
[2026-03-01 23:49:19] -rw-r--r-- 2 boinc boinc    597964 Mar  1 20:29 input.tar.gz
[2026-03-01 23:49:19] -rw------- 1 boinc boinc 228156153 Mar  1 23:32 HITS.pool.root.1
[2026-03-01 23:49:19] -rw------- 1 boinc boinc   1914880 Mar  1 23:33 result.tar.gz
23:49:20 (508236): run_atlas exited; CPU time 42877.728714
23:49:20 (508236): called boinc_finish(0)

</stderr_txt>
]]>

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