Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
20:59:04 (977909): wrapper (7.7.26015): starting
20:59:04 (977909): wrapper: running run_atlas (--nthreads 8)
[2026-02-27 20:59:04] Arguments: --nthreads 8
[2026-02-27 20:59:04] Threads: 8
[2026-02-27 20:59:04] Checking for CVMFS
[2026-02-27 20:59:04] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-27 20:59:05] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-27 20:59:05] Running cvmfs_config stat atlas.cern.ch
[2026-02-27 20:59:06] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-27 20:59:06] 2.13.3.0 11393 164782 577976 156715 0 717 23982164 32935937 27032 16776704 0 434273907 99.383 725950951 40130 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-02-27 20:59:06] CVMFS is ok
[2026-02-27 20:59:06] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-27 20:59:06] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-27 20:59:06] Further information can be found at the LHC@home message board.
[2026-02-27 20:59:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-27 20:59:06] Checking for apptainer binary...
[2026-02-27 20:59:06] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-27 20:59:06] Running /usr/bin/apptainer --version
[2026-02-27 20:59:06] apptainer version 1.4.5-2.el9
[2026-02-27 20:59:06] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-27 20:59:08] c6-5-37-2.aglt2.org
[2026-02-27 20:59:08] apptainer works
[2026-02-27 20:59:08] Set ATHENA_PROC_NUMBER=8
[2026-02-27 20:59:08] Set ATHENA_CORE_NUMBER=8
[2026-02-27 20:59:08] Starting ATLAS job with PandaID=7032072069
[2026-02-27 20:59:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-28 02:53:28]  *** The last 200 lines of the pilot log: ***
[2026-02-28 02:53:28] 2026-02-28 07:52:33,715 | INFO     | extracted standard memory fields from prmon json
[2026-02-28 02:53:28] 2026-02-28 07:52:33,715 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-28 02:53:28] 2026-02-28 07:52:33,714 | INFO     | monitor loop #1219: job 0:7032072069 is in state 'finished'
[2026-02-28 02:53:28] 2026-02-28 07:52:33,720 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-02-28 02:53:28] 2026-02-28 07:52:33,720 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-28 02:53:28] 2026-02-28 07:52:33,724 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-28 02:53:28] 2026-02-28 07:52:33,757 | INFO     | fitting pss+swap vs Time
[2026-02-28 02:53:28] 2026-02-28 07:52:33,758 | INFO     | sum of square deviations: 12624160523.880764
[2026-02-28 02:53:28] 2026-02-28 07:52:33,800 | INFO     | sum of deviations: 6400063977.880795
[2026-02-28 02:53:28] 2026-02-28 07:52:33,801 | INFO     | mean x: 1772254670.6715117
[2026-02-28 02:53:28] 2026-02-28 07:52:33,801 | INFO     | mean y: 2507112.6715116277
[2026-02-28 02:53:28] 2026-02-28 07:52:33,801 | INFO     | intersect: -895971899.5320616
[2026-02-28 02:53:28] 2026-02-28 07:52:33,836 | INFO     | chi2: 4.703575393657984
[2026-02-28 02:53:28] 2026-02-28 07:52:33,836 | INFO     | sum of square deviations: 12081836051.917404
[2026-02-28 02:53:28] 2026-02-28 07:52:33,839 | INFO     | sum of deviations: 71882083117.94395
[2026-02-28 02:53:28] 2026-02-28 07:52:33,839 | INFO     | mean x: 1772254518.1887906
[2026-02-28 02:53:28] 2026-02-28 07:52:33,839 | INFO     | mean y: 2525415.9852507375
[2026-02-28 02:53:28] 2026-02-28 07:52:33,839 | INFO     | intersect: -10541678795.623867
[2026-02-28 02:53:28] 2026-02-28 07:52:33,839 | INFO     | chi2: 2.613808083572294
[2026-02-28 02:53:28] 2026-02-28 07:52:33,868 | INFO     | current chi2=2.613808083572294 (change=44.4293358814532 %)
[2026-02-28 02:53:28] 2026-02-28 07:52:33,869 | INFO     | sum of square deviations: 11555175803.236523
[2026-02-28 02:53:28] 2026-02-28 07:52:33,871 | INFO     | sum of deviations: 71102055369.10179
[2026-02-28 02:53:28] 2026-02-28 07:52:33,871 | INFO     | mean x: 1772254365.6916168
[2026-02-28 02:53:28] 2026-02-28 07:52:33,871 | INFO     | mean y: 2525190.107784431
[2026-02-28 02:53:28] 2026-02-28 07:52:33,872 | INFO     | intersect: -10902625037.22523
[2026-02-28 02:53:28] 2026-02-28 07:52:33,872 | INFO     | chi2: 2.6147372968139626
[2026-02-28 02:53:28] 2026-02-28 07:52:33,872 | INFO     | current chi2=2.6147372968139626 (change=-0.03555017093674859 %)
[2026-02-28 02:53:28] 2026-02-28 07:52:33,872 | INFO     | right removable region: 333
[2026-02-28 02:53:28] 2026-02-28 07:52:33,897 | INFO     | sum of square deviations: 12081611085.291937
[2026-02-28 02:53:28] 2026-02-28 07:52:33,899 | INFO     | sum of deviations: -80599303026.93803
[2026-02-28 02:53:28] 2026-02-28 07:52:33,899 | INFO     | mean x: 1772254823.1858406
[2026-02-28 02:53:28] 2026-02-28 07:52:33,899 | INFO     | mean y: 2531509.554572271
[2026-02-28 02:53:28] 2026-02-28 07:52:33,900 | INFO     | intersect: 11825665239.52569
[2026-02-28 02:53:28] 2026-02-28 07:52:33,900 | INFO     | chi2: 2.2614993855485204
[2026-02-28 02:53:28] 2026-02-28 07:52:33,900 | INFO     | current chi2=2.2614993855485204 (change=51.91956764214327 %)
[2026-02-28 02:53:28] 2026-02-28 07:52:33,951 | INFO     | sum of square deviations: 11554871108.850273
[2026-02-28 02:53:28] 2026-02-28 07:52:33,994 | INFO     | sum of deviations: -91367942891.99994
[2026-02-28 02:53:28] 2026-02-28 07:52:33,994 | INFO     | mean x: 1772254975.6946108
[2026-02-28 02:53:28] 2026-02-28 07:52:33,995 | INFO     | mean y: 2534607.5
[2026-02-28 02:53:28] 2026-02-28 07:52:33,995 | INFO     | intersect: 14016303336.196789
[2026-02-28 02:53:28] 2026-02-28 07:52:33,995 | INFO     | chi2: 2.1947605944477218
[2026-02-28 02:53:28] 2026-02-28 07:52:33,995 | INFO     | current chi2=2.1947605944477218 (change=2.951085970983419 %)
[2026-02-28 02:53:28] 2026-02-28 07:52:33,995 | INFO     | left removable region: 20
[2026-02-28 02:53:28] 2026-02-28 07:52:33,996 | INFO     | sum of square deviations: 9509757118.05751
[2026-02-28 02:53:28] 2026-02-28 07:52:34,056 | INFO     | sum of deviations: -30961917913.23961
[2026-02-28 02:53:28] 2026-02-28 07:52:34,056 | INFO     | mean x: 1772254945.2460065
[2026-02-28 02:53:28] 2026-02-28 07:52:34,056 | INFO     | mean y: 2555849.8083067094
[2026-02-28 02:53:28] 2026-02-28 07:52:34,056 | INFO     | intersect: 5772672946.8944
[2026-02-28 02:53:28] 2026-02-28 07:52:34,057 | INFO     | chi2: 0.019454904435637188
[2026-02-28 02:53:28] 2026-02-28 07:52:34,057 | INFO     | current memory leak: -3.26 B/s (using 313 data points, chi2=0.02)
[2026-02-28 02:53:28] 2026-02-28 07:52:34,057 | INFO     | could have reported an average CPU frequency of 2885 MHz (15 samples)
[2026-02-28 02:53:28] 2026-02-28 07:52:34,058 | INFO     | ..............................
[2026-02-28 02:53:28] 2026-02-28 07:52:34,058 | INFO     | . Timing measurements:
[2026-02-28 02:53:28] 2026-02-28 07:52:34,058 | INFO     | . get job = 0 s
[2026-02-28 02:53:28] 2026-02-28 07:52:34,058 | INFO     | . initial setup = 64 s
[2026-02-28 02:53:28] 2026-02-28 07:52:34,058 | INFO     | . payload setup = 58 s
[2026-02-28 02:53:28] 2026-02-28 07:52:34,058 | INFO     | . stage-in = 0 s
[2026-02-28 02:53:28] 2026-02-28 07:52:34,058 | INFO     | . payload execution = 20968 s
[2026-02-28 02:53:28] 2026-02-28 07:52:34,058 | INFO     | . stage-out = 8 s
[2026-02-28 02:53:28] 2026-02-28 07:52:34,058 | INFO     | . log creation = 1 s
[2026-02-28 02:53:28] 2026-02-28 07:52:34,058 | INFO     | ..............................
[2026-02-28 02:53:28] 2026-02-28 07:52:36,296 | INFO     | 
[2026-02-28 02:53:28] 2026-02-28 07:52:36,296 | INFO     | job summary report
[2026-02-28 02:53:28] 2026-02-28 07:52:36,296 | INFO     | --------------------------------------------------
[2026-02-28 02:53:28] 2026-02-28 07:52:36,296 | INFO     | PanDA job id: 7032072069
[2026-02-28 02:53:28] 2026-02-28 07:52:36,296 | INFO     | task id: 48838447
[2026-02-28 02:53:28] 2026-02-28 07:52:36,296 | INFO     | errors: (none)
[2026-02-28 02:53:28] 2026-02-28 07:52:36,296 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-28 02:53:28] 2026-02-28 07:52:36,296 | INFO     | pilot state: finished 
[2026-02-28 02:53:28] 2026-02-28 07:52:36,296 | INFO     | transexitcode: 0
[2026-02-28 02:53:28] 2026-02-28 07:52:36,296 | INFO     | exeerrorcode: 0
[2026-02-28 02:53:28] 2026-02-28 07:52:36,296 | INFO     | exeerrordiag: 
[2026-02-28 02:53:28] 2026-02-28 07:52:36,297 | INFO     | exitcode: 0
[2026-02-28 02:53:28] 2026-02-28 07:52:36,297 | INFO     | exitmsg: OK
[2026-02-28 02:53:28] 2026-02-28 07:52:36,297 | INFO     | cpuconsumptiontime: 42716 s
[2026-02-28 02:53:28] 2026-02-28 07:52:36,297 | INFO     | nevents: 400
[2026-02-28 02:53:28] 2026-02-28 07:52:36,297 | INFO     | neventsw: 0
[2026-02-28 02:53:28] 2026-02-28 07:52:36,297 | INFO     | pid: 991525
[2026-02-28 02:53:28] 2026-02-28 07:52:36,297 | INFO     | pgrp: 991525
[2026-02-28 02:53:28] 2026-02-28 07:52:36,297 | INFO     | corecount: 8
[2026-02-28 02:53:28] 2026-02-28 07:52:36,297 | INFO     | event service: False
[2026-02-28 02:53:28] 2026-02-28 07:52:36,297 | INFO     | sizes: {0: 2281737, 2: 2281793, 3: 2281821, 4: 2281821, 5: 2282338, 6: 2282338, 21032: 2315881, 21042: 2324879, 21045: 2324935, 21048: 2325129}
[2026-02-28 02:53:28] 2026-02-28 07:52:36,297 | INFO     | --------------------------------------------------
[2026-02-28 02:53:28] 2026-02-28 07:52:36,297 | INFO     | 
[2026-02-28 02:53:28] 2026-02-28 07:52:36,297 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-02-28 02:53:28] 2026-02-28 07:52:36,648 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-28 02:53:28] 2026-02-28 07:52:36,649 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-28 02:53:28] 2026-02-28 07:52:36,649 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-28 02:53:28] 2026-02-28 07:52:36,649 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-28 02:53:28] 2026-02-28 07:52:36,649 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-28 02:53:28] 2026-02-28 07:52:36,649 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-28 02:53:28] 2026-02-28 07:52:36,649 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-28 02:53:28] 2026-02-28 07:52:36,649 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-28 02:53:28] 2026-02-28 07:52:36,649 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-28 02:53:28] 2026-02-28 07:52:36,649 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-28 02:53:28] 2026-02-28 07:52:36,650 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-28 02:53:28] 2026-02-28 07:52:36,650 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-28 02:53:28] 2026-02-28 07:52:36,650 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-28 02:53:28] 2026-02-28 07:52:36,650 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-28 02:53:28] 2026-02-28 07:52:36,650 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-28 02:53:28] 2026-02-28 07:52:36,650 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-28 02:53:28] 2026-02-28 07:52:36,650 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-28 02:53:28] 2026-02-28 07:52:36,650 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-28 02:53:28] 2026-02-28 07:52:36,650 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-28 02:53:28] 2026-02-28 07:52:36,650 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-28 02:53:28] 2026-02-28 07:52:36,650 | INFO     | job 7032072069 has completed (purged errors)
[2026-02-28 02:53:28] 2026-02-28 07:52:36,651 | INFO     | overall cleanup function is called
[2026-02-28 02:53:28] 2026-02-28 07:52:37,129 | INFO     | PID=984943 has CPU usage=9.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-02-28 02:53:28] 2026-02-28 07:52:37,155 | INFO     | .. there are 40 such processes running
[2026-02-28 02:53:28] 2026-02-28 07:52:37,714 | INFO     | --- collectZombieJob: --- 10, [991525]
[2026-02-28 02:53:28] 2026-02-28 07:52:37,715 | INFO     | zombie collector waiting for pid 991525
[2026-02-28 02:53:28] 2026-02-28 07:52:37,715 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-28 02:53:28] 2026-02-28 07:52:37,715 | INFO     | collected zombie processes
[2026-02-28 02:53:28] 2026-02-28 07:52:37,715 | INFO     | will attempt to kill all subprocesses of pid=991525
[2026-02-28 02:53:28] 2026-02-28 07:52:39,779 | INFO     | process IDs to be killed: [991525] (in reverse order)
[2026-02-28 02:53:28] 2026-02-28 07:52:40,000 | WARNING  | found no corresponding commands to process id(s)
[2026-02-28 02:53:28] 2026-02-28 07:52:40,001 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-28 02:53:28] 2026-02-28 07:52:40,104 | INFO     | did not find any defunct processes belonging to 991525
[2026-02-28 02:53:28] 2026-02-28 07:52:40,218 | INFO     | did not find any defunct processes belonging to 991525
[2026-02-28 02:53:28] 2026-02-28 07:52:40,219 | INFO     | ready for new job
[2026-02-28 02:53:28] 2026-02-28 07:52:40,219 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-28 02:53:28] 2026-02-28 07:52:40,272 | INFO     | **************************************
[2026-02-28 02:53:28] 2026-02-28 07:52:40,272 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-28 02:53:28] 2026-02-28 07:52:40,272 | INFO     | **************************************
[2026-02-28 02:53:28] 2026-02-28 07:52:40,272 | INFO     | 
[2026-02-28 02:53:28] 2026-02-28 07:52:40,275 | INFO     | architecture information:
[2026-02-28 02:53:28] 2026-02-28 07:52:40,301 | INFO     | executing command: cat /etc/os-release
[2026-02-28 02:53:28] 2026-02-28 07:52:40,409 | INFO     | cat /etc/os-release:
[2026-02-28 02:53:28] NAME="CentOS Linux"
[2026-02-28 02:53:28] VERSION="7 (Core)"
[2026-02-28 02:53:28] ID="centos"
[2026-02-28 02:53:28] ID_LIKE="rhel fedora"
[2026-02-28 02:53:28] VERSION_ID="7"
[2026-02-28 02:53:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-28 02:53:28] ANSI_COLOR="0;31"
[2026-02-28 02:53:28] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-28 02:53:28] HOME_URL="https://www.centos.org/"
[2026-02-28 02:53:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-28 02:53:28] 
[2026-02-28 02:53:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-28 02:53:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-28 02:53:28] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-28 02:53:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-28 02:53:28] 
[2026-02-28 02:53:28] 2026-02-28 07:52:40,409 | INFO     | **************************************
[2026-02-28 02:53:28] 2026-02-28 07:52:40,915 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-02-28 02:53:28] 2026-02-28 07:52:41,214 | INFO     | sufficient remaining disk space (73821847552 B)
[2026-02-28 02:53:28] 2026-02-28 07:52:41,214 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-28 02:53:28] 2026-02-28 07:52:41,214 | INFO     | current server update state: UPDATING_FINAL
[2026-02-28 02:53:28] 2026-02-28 07:52:41,214 | INFO     | update_server=False
[2026-02-28 02:53:28] 2026-02-28 07:52:41,215 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-28 02:53:28] 2026-02-28 07:52:41,215 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-28 02:53:28] 2026-02-28 07:52:41,255 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-28 02:53:28] 2026-02-28 07:52:41,280 | INFO     | all data control threads have been joined
[2026-02-28 02:53:28] 2026-02-28 07:52:41,417 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-28 02:53:28] 2026-02-28 07:52:41,702 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-02-28 02:53:28] 2026-02-28 07:52:41,703 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-02-28 02:53:28] 2026-02-28 07:52:41,703 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-28 02:53:28] 2026-02-28 07:52:41,703 | INFO     | will abort loop
[2026-02-28 02:53:28] 2026-02-28 07:52:42,220 | INFO     | [job] retrieve thread has finished
[2026-02-28 02:53:28] 2026-02-28 07:52:42,222 | INFO     | [payload] validate_post thread has finished
[2026-02-28 02:53:28] 2026-02-28 07:52:42,275 | INFO     | [payload] failed_post thread has finished
[2026-02-28 02:53:28] 2026-02-28 07:52:42,321 | INFO     | [data] control thread has finished
[2026-02-28 02:53:28] 2026-02-28 07:52:42,363 | INFO     | [job] validate thread has finished
[2026-02-28 02:53:28] 2026-02-28 07:52:42,369 | INFO     | [payload] validate_pre thread has finished
[2026-02-28 02:53:28] 2026-02-28 07:52:42,369 | INFO     | [data] copytool_in thread has finished
[2026-02-28 02:53:28] 2026-02-28 07:52:42,377 | INFO     | [job] create_data_payload thread has finished
[2026-02-28 02:53:28] 2026-02-28 07:52:42,429 | INFO     | [job] queue monitor thread has finished
[2026-02-28 02:53:28] 2026-02-28 07:52:42,442 | INFO     | all job control threads have been joined
[2026-02-28 02:53:28] 2026-02-28 07:52:42,670 | INFO     | [payload] execute_payloads thread has finished
[2026-02-28 02:53:28] 2026-02-28 07:52:42,709 | INFO     | [job] job monitor thread has finished
[2026-02-28 02:53:28] 2026-02-28 07:52:42,778 | INFO     | all payload control threads have been joined
[2026-02-28 02:53:28] 2026-02-28 07:52:43,268 | INFO     | [data] copytool_out thread has finished
[2026-02-28 02:53:28] 2026-02-28 07:52:43,449 | INFO     | [job] control thread has finished
[2026-02-28 02:53:28] 2026-02-28 07:52:43,725 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-28 02:53:28] 2026-02-28 07:52:43,785 | INFO     | [payload] control thread has finished
[2026-02-28 02:53:28] 2026-02-28 07:52:45,227 | INFO     | [data] queue_monitor thread has finished
[2026-02-28 02:53:28] 2026-02-28 07:53:17,591 | INFO     | PID=984943 has CPU usage=3.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-02-28 02:53:28] 2026-02-28 07:53:17,592 | INFO     | .. there are 40 such processes running
[2026-02-28 02:53:28] 2026-02-28 07:53:17,593 | INFO     | found 0 job(s) in 20 queues
[2026-02-28 02:53:28] 2026-02-28 07:53:17,594 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-28 02:53:28] 2026-02-28 07:53:17,594 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-28 02:53:28] 2026-02-28 07:53:19,476 | INFO     | [monitor] cgroup control has ended
[2026-02-28 02:53:28] 2026-02-28 07:53:21,000 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139963710322496)>', '<ExcThread(monitor, started 139962901059328)>']
[2026-02-28 02:53:28] 2026-02-28 07:53:21,685 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-28 02:53:28] 2026-02-28 07:53:21,686 | INFO     | [monitor] control thread has ended
[2026-02-28 02:53:28] 2026-02-28 07:53:26,025 | INFO     | all workflow threads have been joined
[2026-02-28 02:53:28] 2026-02-28 07:53:26,026 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-28 02:53:28] 2026-02-28 07:53:26,026 | INFO     | traces error code: 0
[2026-02-28 02:53:28] 2026-02-28 07:53:26,026 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-28 02:53:28] 2026-02-28 07:53:27,359 [wrapper] ==== pilot stdout END ====
[2026-02-28 02:53:28] 2026-02-28 07:53:27,384 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-28 02:53:28] 2026-02-28 07:53:27,421 [wrapper] pilotpid: 984943
[2026-02-28 02:53:28] 2026-02-28 07:53:27,459 [wrapper] Pilot exit status: 0
[2026-02-28 02:53:28] 2026-02-28 07:53:27,678 [wrapper] pandaids: 7032072069
[2026-02-28 02:53:28] 2026-02-28 07:53:27,934 [wrapper] cleanup supervisor_pilot 1926800 984944
[2026-02-28 02:53:28] 2026-02-28 07:53:27,981 [wrapper] Test setup, not cleaning
[2026-02-28 02:53:28] 2026-02-28 07:53:28,077 [wrapper] apfmon messages muted
[2026-02-28 02:53:28] 2026-02-28 07:53:28,127 [wrapper] ==== wrapper stdout END ====
[2026-02-28 02:53:28] 2026-02-28 07:53:28,160 [wrapper] ==== wrapper stderr END ====
[2026-02-28 02:53:28]  *** Error codes and diagnostics ***
[2026-02-28 02:53:28]     "exeErrorCode": 0,
[2026-02-28 02:53:28]     "exeErrorDiag": "",
[2026-02-28 02:53:28]     "pilotErrorCode": 0,
[2026-02-28 02:53:28]     "pilotErrorDiag": "",
[2026-02-28 02:53:28]  *** Listing of results directory ***
[2026-02-28 02:53:28] total 487956
[2026-02-28 02:53:28] -rw-r--r--. 1 boincer umatlas    584627 Feb 27 15:35 pilot3.tar.gz
[2026-02-28 02:53:28] -rw-r--r--. 1 boincer umatlas      5111 Feb 27 15:36 queuedata.json
[2026-02-28 02:53:28] -rwx------. 1 boincer umatlas     36322 Feb 27 15:36 runpilot2-wrapper.sh
[2026-02-28 02:53:28] -rw-r--r--. 1 boincer umatlas       100 Feb 27 20:59 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-28 02:53:28] -rwxr-xr-x. 1 boincer umatlas      7986 Feb 27 20:59 run_atlas
[2026-02-28 02:53:28] -rw-r--r--. 1 boincer umatlas       105 Feb 27 20:59 job.xml
[2026-02-28 02:53:28] -rw-r--r--. 2 boincer umatlas 279907845 Feb 27 20:59 EVNT.48220117._000005.pool.root.1
[2026-02-28 02:53:28] -rw-r--r--. 2 boincer umatlas     15845 Feb 27 20:59 start_atlas.sh
[2026-02-28 02:53:28] drwxrwx--x. 2 boincer umatlas      4096 Feb 27 20:59 shared
[2026-02-28 02:53:28] -rw-r--r--. 2 boincer umatlas    597977 Feb 27 20:59 input.tar.gz
[2026-02-28 02:53:28] -rw-r--r--. 1 boincer umatlas         0 Feb 27 20:59 boinc_lockfile
[2026-02-28 02:53:28] -rw-r--r--. 1 boincer umatlas      2568 Feb 27 20:59 pandaJob.out
[2026-02-28 02:53:28] -rw-------. 1 boincer umatlas        57 Feb 27 20:59 setup.sh.local
[2026-02-28 02:53:28] -rw-------. 1 boincer umatlas       441 Feb 27 21:01 workernode_map.json
[2026-02-28 02:53:28] -rw-------. 1 boincer umatlas    998790 Feb 27 21:01 agis_schedconf.cvmfs.json
[2026-02-28 02:53:28] drwx------. 5 boincer umatlas      4096 Feb 27 21:01 pilot3
[2026-02-28 02:53:28] -rw-r--r--. 1 boincer umatlas      6843 Feb 28 02:46 init_data.xml
[2026-02-28 02:53:28] -rw-------. 1 boincer umatlas 209665637 Feb 28 02:49 HITS.48838447._001877.pool.root.1
[2026-02-28 02:53:28] -rw-r--r--. 1 boincer umatlas       531 Feb 28 02:49 boinc_task_state.xml
[2026-02-28 02:53:28] -rw-------. 1 boincer umatlas      1055 Feb 28 02:52 memory_monitor_summary.json
[2026-02-28 02:53:28] -rw-------. 1 boincer umatlas   1513015 Feb 28 02:52 agis_ddmendpoints.agis.ALL.json
[2026-02-28 02:53:28] -rw-------. 1 boincer umatlas    540541 Feb 28 02:52 log.48838447._001877.job.log.tgz.1
[2026-02-28 02:53:28] -rw-------. 1 boincer umatlas      6386 Feb 28 02:52 heartbeat.json
[2026-02-28 02:53:28] -rw-r--r--. 1 boincer umatlas      8192 Feb 28 02:53 boinc_mmap_file
[2026-02-28 02:53:28] -rw-r--r--. 1 boincer umatlas        28 Feb 28 02:53 wrapper_checkpoint.txt
[2026-02-28 02:53:28] -rw-------. 1 boincer umatlas        95 Feb 28 02:53 pilot_heartbeat.json
[2026-02-28 02:53:28] -rw-------. 1 boincer umatlas      5005 Feb 28 02:53 pilotlog.txt
[2026-02-28 02:53:28] -rw-------. 1 boincer umatlas   2542786 Feb 28 02:53 log.48838447._001877.job.log.1
[2026-02-28 02:53:28] -rw-------. 1 boincer umatlas       357 Feb 28 02:53 output.list
[2026-02-28 02:53:28] -rw-r--r--. 1 boincer umatlas       620 Feb 28 02:53 runtime_log
[2026-02-28 02:53:28] -rw-------. 1 boincer umatlas   3102720 Feb 28 02:53 result.tar.gz
[2026-02-28 02:53:28] -rw-r--r--. 1 boincer umatlas      9347 Feb 28 02:53 runtime_log.err
[2026-02-28 02:53:28] -rw-------. 1 boincer umatlas       658 Feb 28 02:53 874NDmdkJG9n9Rq4apOajLDm4fhM0noT9bVooX4SDmqs3KDmu8fAzn.diag
[2026-02-28 02:53:28] -rw-r--r--. 1 boincer umatlas     21261 Feb 28 02:53 stderr.txt
[2026-02-28 02:53:28] HITS file was successfully produced:
[2026-02-28 02:53:28] -rw-------. 1 boincer umatlas 209665637 Feb 28 02:49 shared/HITS.pool.root.1
[2026-02-28 02:53:28]  *** Contents of shared directory: ***
[2026-02-28 02:53:28] total 481736
[2026-02-28 02:53:28] -rw-r--r--. 2 boincer umatlas 279907845 Feb 27 20:59 ATLAS.root_0
[2026-02-28 02:53:28] -rw-r--r--. 2 boincer umatlas     15845 Feb 27 20:59 start_atlas.sh
[2026-02-28 02:53:28] -rw-r--r--. 2 boincer umatlas    597977 Feb 27 20:59 input.tar.gz
[2026-02-28 02:53:28] -rw-------. 1 boincer umatlas 209665637 Feb 28 02:49 HITS.pool.root.1
[2026-02-28 02:53:28] -rw-------. 1 boincer umatlas   3102720 Feb 28 02:53 result.tar.gz
02:53:51 (977909): run_atlas exited; CPU time 43472.931568
02:53:51 (977909): called boinc_finish(0)

</stderr_txt>
]]>

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