Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:41:29 (3781): wrapper (7.7.26015): starting
09:41:29 (3781): wrapper: running run_atlas (--nthreads 8)
[2026-02-28 09:41:29] Arguments: --nthreads 8
[2026-02-28 09:41:29] Threads: 8
[2026-02-28 09:41:29] Checking for CVMFS
[2026-02-28 09:41:30] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-28 09:42:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-28 09:42:16] Running cvmfs_config stat atlas.cern.ch
[2026-02-28 09:42:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-28 09:42:16] 2.11.2.0 17502 64486 126732 156726 3 50 24455753 25165825 0 130560 112 16705868 99.887 10467686 590 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://141.99.253.245:3128/ 1
[2026-02-28 09:42:16] CVMFS is ok
[2026-02-28 09:42:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-28 09:42:16] Checking for apptainer binary...
[2026-02-28 09:42:16] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-28 09:42:16] Running /usr/bin/apptainer --version
[2026-02-28 09:42:16] apptainer version 1.3.2-1.el7
[2026-02-28 09:42:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-28 09:42:17] cg-vwn411.simple-grid.lan
[2026-02-28 09:42:17] apptainer works
[2026-02-28 09:42:17] Set ATHENA_PROC_NUMBER=8
[2026-02-28 09:42:17] Set ATHENA_CORE_NUMBER=8
[2026-02-28 09:42:17] Starting ATLAS job with PandaID=7032231917
[2026-02-28 09:42:17] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-28 11:59:54]  *** The last 200 lines of the pilot log: ***
[2026-02-28 11:59:54] 2026-02-28 10:59:05,424 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-02-28 11:59:54] 2026-02-28 10:59:05,538 | INFO     | job 7032231917 has state=finished
[2026-02-28 11:59:54] 2026-02-28 10:59:05,539 | INFO     | preparing for final server update for job 7032231917 in state='finished'
[2026-02-28 11:59:54] 2026-02-28 10:59:05,539 | INFO     | reading metadata from: /var/lib/boinc/slots/8/PanDA_Pilot-7032231917/jobReport.json
[2026-02-28 11:59:54] 2026-02-28 10:59:05,542 | INFO     | added worker_node to metadata from /var/lib/boinc/slots/8/workernode_map.json
[2026-02-28 11:59:54] 2026-02-28 10:59:05,542 | INFO     | this job has now completed (state=finished)
[2026-02-28 11:59:54] 2026-02-28 10:59:05,543 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-28 11:59:54] 2026-02-28 10:59:05,543 | INFO     | log transfer has been attempted: DONE
[2026-02-28 11:59:54] 2026-02-28 10:59:05,543 | INFO     | job 7032231917 has finished - writing final server update
[2026-02-28 11:59:54] 2026-02-28 10:59:05,543 | INFO     | total number of processed events: 400 (read)
[2026-02-28 11:59:54] 2026-02-28 10:59:05,545 | INFO     | using path: /var/lib/boinc/slots/8/PanDA_Pilot-7032231917/memory_monitor_summary.json (trf name=prmon)
[2026-02-28 11:59:54] 2026-02-28 10:59:05,546 | INFO     | extracted standard info from prmon json
[2026-02-28 11:59:54] 2026-02-28 10:59:05,546 | INFO     | extracted standard memory fields from prmon json
[2026-02-28 11:59:54] 2026-02-28 10:59:05,546 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-28 11:59:54] 2026-02-28 10:59:05,547 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-28 11:59:54] 2026-02-28 10:59:05,547 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-28 11:59:54] 2026-02-28 10:59:05,550 | INFO     | fitting pss+swap vs Time
[2026-02-28 11:59:54] 2026-02-28 10:59:05,550 | INFO     | sum of square deviations: 729472282.0
[2026-02-28 11:59:54] 2026-02-28 10:59:05,551 | INFO     | sum of deviations: 3878299052.999995
[2026-02-28 11:59:54] 2026-02-28 10:59:05,551 | INFO     | mean x: 1772272258.0
[2026-02-28 11:59:54] 2026-02-28 10:59:05,552 | INFO     | mean y: 2537326.112781955
[2026-02-28 11:59:54] 2026-02-28 10:59:05,552 | INFO     | intersect: -9419893093.059147
[2026-02-28 11:59:54] 2026-02-28 10:59:05,552 | INFO     | chi2: 1.67892926516231
[2026-02-28 11:59:54] 2026-02-28 10:59:05,552 | INFO     | sum of square deviations: 650252192.0
[2026-02-28 11:59:54] 2026-02-28 10:59:05,553 | INFO     | sum of deviations: 3984343679.5
[2026-02-28 11:59:54] 2026-02-28 10:59:05,554 | INFO     | mean x: 1772272105.5
[2026-02-28 11:59:54] 2026-02-28 10:59:05,554 | INFO     | mean y: 2537530.3515625
[2026-02-28 11:59:54] 2026-02-28 10:59:05,554 | INFO     | intersect: -10856850948.116009
[2026-02-28 11:59:54] 2026-02-28 10:59:05,554 | INFO     | chi2: 1.6808513166228907
[2026-02-28 11:59:54] 2026-02-28 10:59:05,554 | INFO     | current chi2=1.6808513166228907 (change=-0.11448078846816999 %)
[2026-02-28 11:59:54] 2026-02-28 10:59:05,554 | INFO     | right removable region: 127
[2026-02-28 11:59:54] 2026-02-28 10:59:05,555 | INFO     | sum of square deviations: 650252192.0
[2026-02-28 11:59:54] 2026-02-28 10:59:05,556 | INFO     | sum of deviations: -17131688106.0
[2026-02-28 11:59:54] 2026-02-28 10:59:05,556 | INFO     | mean x: 1772272410.5
[2026-02-28 11:59:54] 2026-02-28 10:59:05,556 | INFO     | mean y: 2577108.296875
[2026-02-28 11:59:54] 2026-02-28 10:59:05,556 | INFO     | intersect: 46695258115.9063
[2026-02-28 11:59:54] 2026-02-28 10:59:05,556 | INFO     | chi2: 0.14659802709930905
[2026-02-28 11:59:54] 2026-02-28 10:59:05,556 | INFO     | current chi2=0.14659802709930905 (change=91.26836191725226 %)
[2026-02-28 11:59:54] 2026-02-28 10:59:05,557 | INFO     | sum of square deviations: 576985702.0
[2026-02-28 11:59:54] 2026-02-28 10:59:05,558 | INFO     | sum of deviations: -17843351865.0
[2026-02-28 11:59:54] 2026-02-28 10:59:05,558 | INFO     | mean x: 1772272563.0
[2026-02-28 11:59:54] 2026-02-28 10:59:05,558 | INFO     | mean y: 2578475.837398374
[2026-02-28 11:59:54] 2026-02-28 10:59:05,558 | INFO     | intersect: 54810319521.54944
[2026-02-28 11:59:54] 2026-02-28 10:59:05,558 | INFO     | chi2: 0.11670535691183376
[2026-02-28 11:59:54] 2026-02-28 10:59:05,558 | INFO     | current chi2=0.11670535691183376 (change=20.39090892214073 %)
[2026-02-28 11:59:54] 2026-02-28 10:59:05,558 | INFO     | left removable region: 20
[2026-02-28 11:59:54] 2026-02-28 10:59:05,559 | INFO     | sum of square deviations: 379832238.0
[2026-02-28 11:59:54] 2026-02-28 10:59:05,559 | INFO     | sum of deviations: -9781527327.00001
[2026-02-28 11:59:54] 2026-02-28 10:59:05,560 | INFO     | mean x: 1772272685.0
[2026-02-28 11:59:54] 2026-02-28 10:59:05,560 | INFO     | mean y: 2562386.355140187
[2026-02-28 11:59:54] 2026-02-28 10:59:05,560 | INFO     | intersect: 45642536998.57639
[2026-02-28 11:59:54] 2026-02-28 10:59:05,560 | INFO     | chi2: 0.09692523146618544
[2026-02-28 11:59:54] 2026-02-28 10:59:05,560 | INFO     | current memory leak: -25.75 B/s (using 107 data points, chi2=0.10)
[2026-02-28 11:59:54] 2026-02-28 10:59:05,561 | INFO     | could have reported an average CPU frequency of 1999 MHz (8 samples)
[2026-02-28 11:59:54] 2026-02-28 10:59:05,561 | INFO     | ..............................
[2026-02-28 11:59:54] 2026-02-28 10:59:05,561 | INFO     | . Timing measurements:
[2026-02-28 11:59:54] 2026-02-28 10:59:05,561 | INFO     | . get job = 0 s
[2026-02-28 11:59:54] 2026-02-28 10:59:05,561 | INFO     | . initial setup = 9 s
[2026-02-28 11:59:54] 2026-02-28 10:59:05,561 | INFO     | . payload setup = 8 s
[2026-02-28 11:59:54] 2026-02-28 10:59:05,562 | INFO     | . stage-in = 0 s
[2026-02-28 11:59:54] 2026-02-28 10:59:05,562 | INFO     | . payload execution = 8115 s
[2026-02-28 11:59:54] 2026-02-28 10:59:05,562 | INFO     | . stage-out = 1 s
[2026-02-28 11:59:54] 2026-02-28 10:59:05,562 | INFO     | . log creation = 0 s
[2026-02-28 11:59:54] 2026-02-28 10:59:05,562 | INFO     | ..............................
[2026-02-28 11:59:54] 2026-02-28 10:59:05,674 | INFO     | 
[2026-02-28 11:59:54] 2026-02-28 10:59:05,674 | INFO     | job summary report
[2026-02-28 11:59:54] 2026-02-28 10:59:05,674 | INFO     | --------------------------------------------------
[2026-02-28 11:59:54] 2026-02-28 10:59:05,674 | INFO     | PanDA job id: 7032231917
[2026-02-28 11:59:54] 2026-02-28 10:59:05,674 | INFO     | task id: 48838610
[2026-02-28 11:59:54] 2026-02-28 10:59:05,674 | INFO     | errors: (none)
[2026-02-28 11:59:54] 2026-02-28 10:59:05,674 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-28 11:59:54] 2026-02-28 10:59:05,675 | INFO     | pilot state: finished 
[2026-02-28 11:59:54] 2026-02-28 10:59:05,675 | INFO     | transexitcode: 0
[2026-02-28 11:59:54] 2026-02-28 10:59:05,675 | INFO     | exeerrorcode: 0
[2026-02-28 11:59:54] 2026-02-28 10:59:05,675 | INFO     | exeerrordiag: 
[2026-02-28 11:59:54] 2026-02-28 10:59:05,675 | INFO     | exitcode: 0
[2026-02-28 11:59:54] 2026-02-28 10:59:05,675 | INFO     | exitmsg: OK
[2026-02-28 11:59:54] 2026-02-28 10:59:05,675 | INFO     | cpuconsumptiontime: 60527 s
[2026-02-28 11:59:54] 2026-02-28 10:59:05,675 | INFO     | nevents: 400
[2026-02-28 11:59:54] 2026-02-28 10:59:05,675 | INFO     | neventsw: 0
[2026-02-28 11:59:54] 2026-02-28 10:59:05,676 | INFO     | pid: 12241
[2026-02-28 11:59:54] 2026-02-28 10:59:05,676 | INFO     | pgrp: 12241
[2026-02-28 11:59:54] 2026-02-28 10:59:05,676 | INFO     | corecount: 8
[2026-02-28 11:59:54] 2026-02-28 10:59:05,676 | INFO     | event service: False
[2026-02-28 11:59:54] 2026-02-28 10:59:05,676 | INFO     | sizes: {0: 2281145, 1: 2282263, 2: 2282263, 8127: 2310005, 8129: 2319003, 8130: 2319381}
[2026-02-28 11:59:54] 2026-02-28 10:59:05,676 | INFO     | --------------------------------------------------
[2026-02-28 11:59:54] 2026-02-28 10:59:05,676 | INFO     | 
[2026-02-28 11:59:54] 2026-02-28 10:59:05,676 | INFO     | executing command: ls -lF /var/lib/boinc/slots/8
[2026-02-28 11:59:54] 2026-02-28 10:59:05,702 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-28 11:59:54] 2026-02-28 10:59:05,702 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-28 11:59:54] 2026-02-28 10:59:05,703 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-28 11:59:54] 2026-02-28 10:59:05,703 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-28 11:59:54] 2026-02-28 10:59:05,703 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-28 11:59:54] 2026-02-28 10:59:05,703 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-28 11:59:54] 2026-02-28 10:59:05,703 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-28 11:59:54] 2026-02-28 10:59:05,703 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-28 11:59:54] 2026-02-28 10:59:05,703 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-28 11:59:54] 2026-02-28 10:59:05,703 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-28 11:59:54] 2026-02-28 10:59:05,704 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-28 11:59:54] 2026-02-28 10:59:05,704 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-28 11:59:54] 2026-02-28 10:59:05,704 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-28 11:59:54] 2026-02-28 10:59:05,704 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-28 11:59:54] 2026-02-28 10:59:05,704 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-28 11:59:54] 2026-02-28 10:59:05,704 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-28 11:59:54] 2026-02-28 10:59:05,704 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-28 11:59:54] 2026-02-28 10:59:05,704 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-28 11:59:54] 2026-02-28 10:59:05,705 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-28 11:59:54] 2026-02-28 10:59:05,705 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-28 11:59:54] 2026-02-28 10:59:05,705 | INFO     | job 7032231917 has completed (purged errors)
[2026-02-28 11:59:54] 2026-02-28 10:59:05,705 | INFO     | overall cleanup function is called
[2026-02-28 11:59:54] 2026-02-28 10:59:06,713 | INFO     | --- collectZombieJob: --- 10, [12241]
[2026-02-28 11:59:54] 2026-02-28 10:59:06,714 | INFO     | zombie collector waiting for pid 12241
[2026-02-28 11:59:54] 2026-02-28 10:59:06,714 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-28 11:59:54] 2026-02-28 10:59:06,714 | INFO     | collected zombie processes
[2026-02-28 11:59:54] 2026-02-28 10:59:06,714 | INFO     | will attempt to kill all subprocesses of pid=12241
[2026-02-28 11:59:54] 2026-02-28 10:59:06,772 | INFO     | process IDs to be killed: [12241] (in reverse order)
[2026-02-28 11:59:54] 2026-02-28 10:59:06,818 | WARNING  | found no corresponding commands to process id(s)
[2026-02-28 11:59:54] 2026-02-28 10:59:06,819 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-28 11:59:54] 2026-02-28 10:59:06,821 | INFO     | did not find any defunct processes belonging to 12241
[2026-02-28 11:59:54] 2026-02-28 10:59:06,822 | INFO     | did not find any defunct processes belonging to 12241
[2026-02-28 11:59:54] 2026-02-28 10:59:06,822 | INFO     | ready for new job
[2026-02-28 11:59:54] 2026-02-28 10:59:06,823 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-28 11:59:54] 2026-02-28 10:59:06,824 | INFO     | **************************************
[2026-02-28 11:59:54] 2026-02-28 10:59:06,824 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-28 11:59:54] 2026-02-28 10:59:06,825 | INFO     | **************************************
[2026-02-28 11:59:54] 2026-02-28 10:59:06,825 | INFO     | 
[2026-02-28 11:59:54] 2026-02-28 10:59:06,825 | INFO     | pilot is running in a VM
[2026-02-28 11:59:54] 2026-02-28 10:59:06,826 | INFO     | architecture information:
[2026-02-28 11:59:54] 2026-02-28 10:59:06,826 | INFO     | executing command: cat /etc/os-release
[2026-02-28 11:59:54] 2026-02-28 10:59:06,844 | INFO     | cat /etc/os-release:
[2026-02-28 11:59:54] NAME="CentOS Linux"
[2026-02-28 11:59:54] VERSION="7 (Core)"
[2026-02-28 11:59:54] ID="centos"
[2026-02-28 11:59:54] ID_LIKE="rhel fedora"
[2026-02-28 11:59:54] VERSION_ID="7"
[2026-02-28 11:59:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-28 11:59:54] ANSI_COLOR="0;31"
[2026-02-28 11:59:54] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-28 11:59:54] HOME_URL="https://www.centos.org/"
[2026-02-28 11:59:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-28 11:59:54] 
[2026-02-28 11:59:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-28 11:59:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-28 11:59:54] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-28 11:59:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-28 11:59:54] 
[2026-02-28 11:59:54] 2026-02-28 10:59:06,844 | INFO     | **************************************
[2026-02-28 11:59:54] 2026-02-28 10:59:07,348 | INFO     | executing command: df -mP /var/lib/boinc/slots/8
[2026-02-28 11:59:54] 2026-02-28 10:59:07,366 | INFO     | sufficient remaining disk space (497674092544 B)
[2026-02-28 11:59:54] 2026-02-28 10:59:07,366 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-28 11:59:54] 2026-02-28 10:59:07,366 | INFO     | current server update state: UPDATING_FINAL
[2026-02-28 11:59:54] 2026-02-28 10:59:07,366 | INFO     | update_server=False
[2026-02-28 11:59:54] 2026-02-28 10:59:07,367 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-28 11:59:54] 2026-02-28 10:59:07,367 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-28 11:59:54] 2026-02-28 10:59:07,367 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-28 11:59:54] 2026-02-28 10:59:07,368 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-28 11:59:54] 2026-02-28 10:59:07,368 | INFO     | aborting loop
[2026-02-28 11:59:54] 2026-02-28 10:59:07,793 | INFO     | all payload control threads have been joined
[2026-02-28 11:59:54] 2026-02-28 10:59:08,180 | INFO     | all data control threads have been joined
[2026-02-28 11:59:54] 2026-02-28 10:59:08,187 | INFO     | all job control threads have been joined
[2026-02-28 11:59:54] 2026-02-28 10:59:08,372 | INFO     | [job] retrieve thread has finished
[2026-02-28 11:59:54] 2026-02-28 10:59:08,373 | INFO     | [job] queue monitor thread has finished
[2026-02-28 11:59:54] 2026-02-28 10:59:08,374 | INFO     | [job] job monitor thread has finished
[2026-02-28 11:59:54] 2026-02-28 10:59:08,388 | INFO     | [payload] validate_pre thread has finished
[2026-02-28 11:59:54] 2026-02-28 10:59:08,430 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-28 11:59:54] 2026-02-28 10:59:08,561 | INFO     | [payload] execute_payloads thread has finished
[2026-02-28 11:59:54] 2026-02-28 10:59:08,649 | INFO     | [job] create_data_payload thread has finished
[2026-02-28 11:59:54] 2026-02-28 10:59:08,799 | INFO     | [payload] control thread has finished
[2026-02-28 11:59:54] 2026-02-28 10:59:08,826 | INFO     | [job] validate thread has finished
[2026-02-28 11:59:54] 2026-02-28 10:59:08,839 | INFO     | [data] copytool_in thread has finished
[2026-02-28 11:59:54] 2026-02-28 10:59:09,047 | INFO     | [payload] failed_post thread has finished
[2026-02-28 11:59:54] 2026-02-28 10:59:09,185 | INFO     | [data] control thread has finished
[2026-02-28 11:59:54] 2026-02-28 10:59:09,192 | INFO     | [job] control thread has finished
[2026-02-28 11:59:54] 2026-02-28 10:59:09,262 | INFO     | [payload] validate_post thread has finished
[2026-02-28 11:59:54] 2026-02-28 10:59:10,436 | INFO     | [data] copytool_out thread has finished
[2026-02-28 11:59:54] 2026-02-28 10:59:11,374 | INFO     | [data] queue_monitor thread has finished
[2026-02-28 11:59:54] 2026-02-28 10:59:17,532 | INFO     | job.realtimelogging is not enabled
[2026-02-28 11:59:54] 2026-02-28 10:59:18,538 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-28 11:59:54] 2026-02-28 10:59:38,509 | INFO     | PID=7821 has CPU usage=5.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-02-28 11:59:54] 2026-02-28 10:59:38,509 | INFO     | found 0 job(s) in 20 queues
[2026-02-28 11:59:54] 2026-02-28 10:59:38,509 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-28 11:59:54] 2026-02-28 10:59:38,509 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-28 11:59:54] 2026-02-28 10:59:47,511 | INFO     | [monitor] cgroup control has ended
[2026-02-28 11:59:54] 2026-02-28 10:59:49,198 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140003513382720)>', '<ExcThread(monitor, started 140002763724544)>']
[2026-02-28 11:59:54] 2026-02-28 10:59:49,561 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-28 11:59:54] 2026-02-28 10:59:49,562 | INFO     | [monitor] control thread has ended
[2026-02-28 11:59:54] 2026-02-28 10:59:54,212 | INFO     | all workflow threads have been joined
[2026-02-28 11:59:54] 2026-02-28 10:59:54,213 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-28 11:59:54] 2026-02-28 10:59:54,213 | INFO     | traces error code: 0
[2026-02-28 11:59:54] 2026-02-28 10:59:54,213 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-28 11:59:54] 2026-02-28 10:59:54,357 [wrapper] ==== pilot stdout END ====
[2026-02-28 11:59:54] 2026-02-28 10:59:54,361 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-28 11:59:54] 2026-02-28 10:59:54,365 [wrapper] pilotpid: 7821
[2026-02-28 11:59:54] 2026-02-28 10:59:54,370 [wrapper] Pilot exit status: 0
[2026-02-28 11:59:54] 2026-02-28 10:59:54,387 [wrapper] pandaids: 7032231917
[2026-02-28 11:59:54] 2026-02-28 10:59:54,418 [wrapper] cleanup supervisor_pilot 17299 7822
[2026-02-28 11:59:54] 2026-02-28 10:59:54,423 [wrapper] Test setup, not cleaning
[2026-02-28 11:59:54] 2026-02-28 10:59:54,433 [wrapper] apfmon messages muted
[2026-02-28 11:59:54] 2026-02-28 10:59:54,437 [wrapper] ==== wrapper stdout END ====
[2026-02-28 11:59:54] 2026-02-28 10:59:54,440 [wrapper] ==== wrapper stderr END ====
[2026-02-28 11:59:54]  *** Error codes and diagnostics ***
[2026-02-28 11:59:54]     "exeErrorCode": 0,
[2026-02-28 11:59:54]     "exeErrorDiag": "",
[2026-02-28 11:59:54]     "pilotErrorCode": 0,
[2026-02-28 11:59:54]     "pilotErrorDiag": "",
[2026-02-28 11:59:54]  *** Listing of results directory ***
[2026-02-28 11:59:54] total 472176
[2026-02-28 11:59:54] -rw-r--r--. 1 boinc boinc    584627 Feb 27 23:54 pilot3.tar.gz
[2026-02-28 11:59:54] -rw-r--r--. 1 boinc boinc      5111 Feb 27 23:55 queuedata.json
[2026-02-28 11:59:54] -rwx------. 1 boinc boinc     36322 Feb 27 23:56 runpilot2-wrapper.sh
[2026-02-28 11:59:54] -rw-r--r--. 1 boinc boinc       100 Feb 28 09:41 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-28 11:59:54] -rwxr-xr-x. 1 boinc boinc      7986 Feb 28 09:41 run_atlas
[2026-02-28 11:59:54] -rw-r--r--. 1 boinc boinc       105 Feb 28 09:41 job.xml
[2026-02-28 11:59:54] -rw-r--r--. 1 boinc boinc      6391 Feb 28 09:41 init_data.xml
[2026-02-28 11:59:54] -rw-r--r--. 2 boinc boinc 272355570 Feb 28 09:41 EVNT.48343779._000029.pool.root.1
[2026-02-28 11:59:54] -rw-r--r--. 2 boinc boinc     15845 Feb 28 09:41 start_atlas.sh
[2026-02-28 11:59:54] drwxrwx--x. 2 boinc boinc        68 Feb 28 09:41 shared
[2026-02-28 11:59:54] -rw-r--r--. 2 boinc boinc    597974 Feb 28 09:41 input.tar.gz
[2026-02-28 11:59:54] -rw-r--r--. 1 boinc boinc         0 Feb 28 09:41 boinc_lockfile
[2026-02-28 11:59:54] -rw-r--r--. 1 boinc boinc      2576 Feb 28 09:42 pandaJob.out
[2026-02-28 11:59:54] -rw-------. 1 boinc boinc    998782 Feb 28 09:43 agis_schedconf.cvmfs.json
[2026-02-28 11:59:54] -rw-------. 1 boinc boinc   1513015 Feb 28 09:43 agis_ddmendpoints.agis.ALL.json
[2026-02-28 11:59:54] -rw-------. 1 boinc boinc       415 Feb 28 09:43 workernode_map.json
[2026-02-28 11:59:54] drwx------. 5 boinc boinc      4096 Feb 28 09:43 pilot3
[2026-02-28 11:59:54] -rw-------. 1 boinc boinc 204179558 Feb 28 11:58 HITS.48838610._000731.pool.root.1
[2026-02-28 11:59:54] -rw-r--r--. 1 boinc boinc       529 Feb 28 11:58 boinc_task_state.xml
[2026-02-28 11:59:54] -rw-------. 1 boinc boinc      1012 Feb 28 11:58 memory_monitor_summary.json
[2026-02-28 11:59:54] -rw-------. 1 boinc boinc        95 Feb 28 11:59 pilot_heartbeat.json
[2026-02-28 11:59:54] -rw-------. 1 boinc boinc    385133 Feb 28 11:59 log.48838610._000731.job.log.tgz.1
[2026-02-28 11:59:54] -rw-------. 1 boinc boinc      6304 Feb 28 11:59 heartbeat.json
[2026-02-28 11:59:54] -rw-r--r--. 1 boinc boinc      8192 Feb 28 11:59 boinc_mmap_file
[2026-02-28 11:59:54] -rw-r--r--. 1 boinc boinc        27 Feb 28 11:59 wrapper_checkpoint.txt
[2026-02-28 11:59:54] -rw-------. 1 boinc boinc      4876 Feb 28 11:59 pilotlog.txt
[2026-02-28 11:59:54] -rw-------. 1 boinc boinc   1142417 Feb 28 11:59 log.48838610._000731.job.log.1
[2026-02-28 11:59:54] -rw-------. 1 boinc boinc       357 Feb 28 11:59 output.list
[2026-02-28 11:59:54] -rw-r--r--. 1 boinc boinc       620 Feb 28 11:59 runtime_log
[2026-02-28 11:59:54] -rw-------. 1 boinc boinc   1546240 Feb 28 11:59 result.tar.gz
[2026-02-28 11:59:54] -rw-------. 1 boinc boinc       652 Feb 28 11:59 GiyLDmqvLG9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmvu5KDmVXJVMo.diag
[2026-02-28 11:59:54] -rw-r--r--. 1 boinc boinc      8815 Feb 28 11:59 runtime_log.err
[2026-02-28 11:59:54] -rw-r--r--. 1 boinc boinc     20873 Feb 28 11:59 stderr.txt
[2026-02-28 11:59:54] HITS file was successfully produced:
[2026-02-28 11:59:54] -rw-------. 1 boinc boinc 204179558 Feb 28 11:58 shared/HITS.pool.root.1
[2026-02-28 11:59:54]  *** Contents of shared directory: ***
[2026-02-28 11:59:54] total 467484
[2026-02-28 11:59:54] -rw-r--r--. 2 boinc boinc 272355570 Feb 28 09:41 ATLAS.root_0
[2026-02-28 11:59:54] -rw-r--r--. 2 boinc boinc     15845 Feb 28 09:41 start_atlas.sh
[2026-02-28 11:59:54] -rw-r--r--. 2 boinc boinc    597974 Feb 28 09:41 input.tar.gz
[2026-02-28 11:59:54] -rw-------. 1 boinc boinc 204179558 Feb 28 11:58 HITS.pool.root.1
[2026-02-28 11:59:54] -rw-------. 1 boinc boinc   1546240 Feb 28 11:59 result.tar.gz
11:59:56 (3781): run_atlas exited; CPU time 60573.452663
11:59:56 (3781): called boinc_finish(0)

</stderr_txt>
]]>

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