Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
19:47:03 (3824192): wrapper (7.7.26015): starting
19:47:03 (3824192): wrapper: running run_atlas (--nthreads 12)
[2026-02-27 19:47:03] Arguments: --nthreads 12
[2026-02-27 19:47:03] Threads: 12
[2026-02-27 19:47:03] Checking for CVMFS
[2026-02-27 19:47:04] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-27 19:47:05] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-27 19:47:05] Running cvmfs_config stat atlas.cern.ch
[2026-02-27 19:47:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-27 19:47:07] 2.11.5.0 3306151 128051 221068 156718 2 331 23179900 45568001 20327 130560 0 741855592 99.810 445004484 21884 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2026-02-27 19:47:07] CVMFS is ok
[2026-02-27 19:47:07] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-27 19:47:07] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-27 19:47:07] Further information can be found at the LHC@home message board.
[2026-02-27 19:47:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-27 19:47:07] Checking for apptainer binary...
[2026-02-27 19:47:07] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-27 19:47:07] Running /usr/bin/apptainer --version
[2026-02-27 19:47:08] apptainer version 1.4.1-1.el9
[2026-02-27 19:47:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-27 19:47:09] wns0041.triumf.lcg
[2026-02-27 19:47:09] apptainer works
[2026-02-27 19:47:09] Set ATHENA_PROC_NUMBER=12
[2026-02-27 19:47:09] Set ATHENA_CORE_NUMBER=12
[2026-02-27 19:47:09] Starting ATLAS job with PandaID=7032228039
[2026-02-27 19:47:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-27 19:52:48]  *** The last 200 lines of the pilot log: ***
[2026-02-27 19:52:48] 2026-02-28 03:52:12,672 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-27 19:52:48] 2026-02-28 03:52:12,672 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-27 19:52:48] 2026-02-28 03:52:12,691 | WARNING  | wrong length of table data, x=[1772250568.0], y=[3272.0] (must be same and length>=4)
[2026-02-27 19:52:48] 2026-02-28 03:52:12,691 | INFO     | could have reported an average CPU frequency of 1363 MHz (4 samples)
[2026-02-27 19:52:48] 2026-02-28 03:52:12,691 | INFO     | ..............................
[2026-02-27 19:52:48] 2026-02-28 03:52:12,691 | INFO     | . Timing measurements:
[2026-02-27 19:52:48] 2026-02-28 03:52:12,691 | INFO     | . get job = 0 s
[2026-02-27 19:52:48] 2026-02-28 03:52:12,691 | INFO     | . initial setup = 31 s
[2026-02-27 19:52:48] 2026-02-28 03:52:12,692 | INFO     | . payload setup = 27 s
[2026-02-27 19:52:48] 2026-02-28 03:52:12,692 | INFO     | . stage-in = 0 s
[2026-02-27 19:52:48] 2026-02-28 03:52:12,692 | INFO     | . payload execution = 59 s
[2026-02-27 19:52:48] 2026-02-28 03:52:12,692 | INFO     | . stage-out = 0 s
[2026-02-27 19:52:48] 2026-02-28 03:52:12,692 | INFO     | . log creation = 0 s
[2026-02-27 19:52:48] 2026-02-28 03:52:12,692 | INFO     | ..............................
[2026-02-27 19:52:48] 2026-02-28 03:52:12,692 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-02-27 19:52:48] 2026-02-28 03:52:12,692 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7032228039/pilotlog.txt
[2026-02-27 19:52:48] 2026-02-28 03:52:12,882 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-02-27 19:52:48] - Log from pilotlog.txt -
[2026-02-27 19:52:48] 2026-02-28 03:52:12,670 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-7032228039/memory_monitor_summary.json (trf name=prmon)
[2026-02-27 19:52:48] 2026-02-28 03:52:12,671 | INFO     | extracted standard info from prmon json
[2026-02-27 19:52:48] 2026-02-28 03:52:12,671 | INFO     | extracted standard memory fields from prmon json
[2026-02-27 19:52:48] 2026-02-28 03:52:12,671 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-27 19:52:48] 2026-02-28 03:52:12,672 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-27 19:52:48] 2026-02-28 03:52:12,672 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-27 19:52:48] 2026-02-28 03:52:12,691 | WARNING  | wrong length of table data, x=[1772250568.0], y=[3272.0] (must be same and length>=4)
[2026-02-27 19:52:48] 2026-02-28 03:52:12,691 | INFO     | could have reported an average CPU frequency of 1363 MHz (4 samples)
[2026-02-27 19:52:48] 2026-02-28 03:52:12,691 | INFO     | ..............................
[2026-02-27 19:52:48] 2026-02-28 03:52:12,691 | INFO     | . Timing measurements:
[2026-02-27 19:52:48] 2026-02-28 03:52:12,691 | INFO     | . get job = 0 s
[2026-02-27 19:52:48] 2026-02-28 03:52:12,691 | INFO     | . initial setup = 31 s
[2026-02-27 19:52:48] 2026-02-28 03:52:12,692 | INFO     | . payload setup = 27 s
[2026-02-27 19:52:48] 2026-02-28 03:52:12,692 | INFO     | . stage-in = 0 s
[2026-02-27 19:52:48] 2026-02-28 03:52:12,692 | INFO     | . payload execution = 59 s
[2026-02-27 19:52:48] 2026-02-28 03:52:12,692 | INFO     | . stage-out = 0 s
[2026-02-27 19:52:48] 2026-02-28 03:52:12,692 | INFO     | . log creation = 0 s
[2026-02-27 19:52:48] 2026-02-28 03:52:12,692 | INFO     | ..............................
[2026-02-27 19:52:48] 2026-02-28 03:52:12,692 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-02-27 19:52:48] 2026-02-28 03:52:12,692 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7032228039/pilotlog.txt
[2026-02-27 19:52:48] 2026-02-28 03:52:12,883 | WARNING  | 
[2026-02-27 19:52:48] [begin log extracts]
[2026-02-27 19:52:48] - Log from pilotlog.txt -
[2026-02-27 19:52:48] 2026-02-28 03:52:12,670 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-7032228039/memory_monitor_summary.json (trf name=prmon)
[2026-02-27 19:52:48] 2026-02-28 03:52:12,671 | INFO     | extracted standard info from prmon json
[2026-02-27 19:52:48] 2026-02-28 03:52:12,671 | INFO     | extracted standard memory fields from prmon json
[2026-02-27 19:52:48] 2026-02-28 03:52:12,671 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-27 19:52:48] 2026-02-28 03:52:12,672 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-27 19:52:48] 2026-02-28 03:52:12,672 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-27 19:52:48] 2026-02-28 03:52:12,691 | WARNING  | wrong length of table data, x=[1772250568.0], y=[3272.0] (must be same and length>=4)
[2026-02-27 19:52:48] 2026-02-28 03:52:12,691 | INFO     | could have reported an average CPU frequency of 1363 MHz (4 samples)
[2026-02-27 19:52:48] 2026-02-28 03:52:12,691 | INFO     | ..............................
[2026-02-27 19:52:48] 2026-02-28 03:52:12,691 | INFO     | . Timing measurements:
[2026-02-27 19:52:48] 2026-02-28 03:52:12,691 | INFO     | . get job = 0 s
[2026-02-27 19:52:48] 2026-02-28 03:52:12,691 | INFO     | . initial setup = 31 s
[2026-02-27 19:52:48] 2026-02-28 03:52:12,692 | INFO     | . payload setup = 27 s
[2026-02-27 19:52:48] 2026-02-28 03:52:12,692 | INFO     | . stage-in = 0 s
[2026-02-27 19:52:48] 2026-02-28 03:52:12,692 | INFO     | . payload execution = 59 s
[2026-02-27 19:52:48] 2026-02-28 03:52:12,692 | INFO     | . stage-out = 0 s
[2026-02-27 19:52:48] 2026-02-28 03:52:12,692 | INFO     | . log creation = 0 s
[2026-02-27 19:52:48] 2026-02-28 03:52:12,692 | INFO     | ..............................
[2026-02-27 19:52:48] 2026-02-28 03:52:12,692 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-02-27 19:52:48] 2026-02-28 03:52:12,692 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7032228039/pilotlog.txt
[2026-02-27 19:52:48] [end log extracts]
[2026-02-27 19:52:48] 2026-02-28 03:52:12,883 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2026-02-27 19:52:48] 2026-02-28 03:52:12,885 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2026-02-27 19:52:48] 2026-02-28 03:52:13,261 | INFO     | 
[2026-02-27 19:52:48] 2026-02-28 03:52:13,261 | INFO     | job summary report
[2026-02-27 19:52:48] 2026-02-28 03:52:13,262 | INFO     | --------------------------------------------------
[2026-02-27 19:52:48] 2026-02-28 03:52:13,262 | INFO     | PanDA job id: 7032228039
[2026-02-27 19:52:48] 2026-02-28 03:52:13,262 | INFO     | task id: 48838521
[2026-02-27 19:52:48] 2026-02-28 03:52:13,262 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-02-27 19:49:59,634 CRITICAL Transform executor raised TransformValidationExceptio
[2026-02-27 19:52:48] 2026-02-28 03:52:13,262 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-27 19:52:48] 2026-02-28 03:52:13,262 | INFO     | pilot state: failed 
[2026-02-27 19:52:48] 2026-02-28 03:52:13,262 | INFO     | transexitcode: 65
[2026-02-27 19:52:48] 2026-02-28 03:52:13,262 | INFO     | exeerrorcode: 65
[2026-02-27 19:52:48] 2026-02-28 03:52:13,262 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2026-02-27 19:52:48] 2026-02-28 03:52:13,262 | INFO     | exitcode: 65
[2026-02-27 19:52:48] 2026-02-28 03:52:13,263 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2026-02-27 19:52:48] 2026-02-28 03:52:13,263 | INFO     | cpuconsumptiontime: 24 s
[2026-02-27 19:52:48] 2026-02-28 03:52:13,263 | INFO     | nevents: 0
[2026-02-27 19:52:48] 2026-02-28 03:52:13,263 | INFO     | neventsw: 0
[2026-02-27 19:52:48] 2026-02-28 03:52:13,263 | INFO     | pid: 3833169
[2026-02-27 19:52:48] 2026-02-28 03:52:13,263 | INFO     | pgrp: 3833169
[2026-02-27 19:52:48] 2026-02-28 03:52:13,263 | INFO     | corecount: 12
[2026-02-27 19:52:48] 2026-02-28 03:52:13,263 | INFO     | event service: False
[2026-02-27 19:52:48] 2026-02-28 03:52:13,263 | INFO     | sizes: {0: 2281838, 1: 2282299, 2: 2282327, 91: 2305533, 93: 2309825, 95: 2309853, 214: 2310147}
[2026-02-27 19:52:48] 2026-02-28 03:52:13,263 | INFO     | --------------------------------------------------
[2026-02-27 19:52:48] 2026-02-28 03:52:13,263 | INFO     | 
[2026-02-27 19:52:48] 2026-02-28 03:52:13,264 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2026-02-27 19:52:48] 2026-02-28 03:52:13,300 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-27 19:52:48] 2026-02-28 03:52:13,300 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-27 19:52:48] 2026-02-28 03:52:13,300 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-27 19:52:48] 2026-02-28 03:52:13,300 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-27 19:52:48] 2026-02-28 03:52:13,301 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-27 19:52:48] 2026-02-28 03:52:13,301 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-27 19:52:48] 2026-02-28 03:52:13,301 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-27 19:52:48] 2026-02-28 03:52:13,301 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-27 19:52:48] 2026-02-28 03:52:13,301 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-27 19:52:48] 2026-02-28 03:52:13,301 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-27 19:52:48] 2026-02-28 03:52:13,301 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-27 19:52:48] 2026-02-28 03:52:13,301 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-27 19:52:48] 2026-02-28 03:52:13,301 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-27 19:52:48] 2026-02-28 03:52:13,302 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-27 19:52:48] 2026-02-28 03:52:13,302 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-27 19:52:48] 2026-02-28 03:52:13,302 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-27 19:52:48] 2026-02-28 03:52:13,302 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-27 19:52:48] 2026-02-28 03:52:13,302 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-27 19:52:48] 2026-02-28 03:52:13,302 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-27 19:52:48] 2026-02-28 03:52:13,302 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-27 19:52:48] 2026-02-28 03:52:13,302 | INFO     | job 7032228039 has completed (purged errors)
[2026-02-27 19:52:48] 2026-02-28 03:52:13,303 | INFO     | overall cleanup function is called
[2026-02-27 19:52:48] 2026-02-28 03:52:14,318 | INFO     | --- collectZombieJob: --- 10, [3833169]
[2026-02-27 19:52:48] 2026-02-28 03:52:14,318 | INFO     | zombie collector waiting for pid 3833169
[2026-02-27 19:52:48] 2026-02-28 03:52:14,318 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-27 19:52:48] 2026-02-28 03:52:14,318 | INFO     | collected zombie processes
[2026-02-27 19:52:48] 2026-02-28 03:52:14,319 | INFO     | will attempt to kill all subprocesses of pid=3833169
[2026-02-27 19:52:48] 2026-02-28 03:52:15,888 | INFO     | process IDs to be killed: [3833169] (in reverse order)
[2026-02-27 19:52:48] 2026-02-28 03:52:16,462 | WARNING  | found no corresponding commands to process id(s)
[2026-02-27 19:52:48] 2026-02-28 03:52:16,462 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-27 19:52:48] 2026-02-28 03:52:16,496 | INFO     | did not find any defunct processes belonging to 3833169
[2026-02-27 19:52:48] 2026-02-28 03:52:16,539 | INFO     | did not find any defunct processes belonging to 3833169
[2026-02-27 19:52:48] 2026-02-28 03:52:16,540 | INFO     | ready for new job
[2026-02-27 19:52:48] 2026-02-28 03:52:16,540 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-27 19:52:48] 2026-02-28 03:52:16,553 | INFO     | **************************************
[2026-02-27 19:52:48] 2026-02-28 03:52:16,553 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-27 19:52:48] 2026-02-28 03:52:16,553 | INFO     | **************************************
[2026-02-27 19:52:48] 2026-02-28 03:52:16,553 | INFO     | 
[2026-02-27 19:52:48] 2026-02-28 03:52:16,567 | INFO     | architecture information:
[2026-02-27 19:52:48] 2026-02-28 03:52:16,568 | INFO     | executing command: cat /etc/os-release
[2026-02-27 19:52:48] 2026-02-28 03:52:16,619 | INFO     | cat /etc/os-release:
[2026-02-27 19:52:48] NAME="CentOS Linux"
[2026-02-27 19:52:48] VERSION="7 (Core)"
[2026-02-27 19:52:48] ID="centos"
[2026-02-27 19:52:48] ID_LIKE="rhel fedora"
[2026-02-27 19:52:48] VERSION_ID="7"
[2026-02-27 19:52:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-27 19:52:48] ANSI_COLOR="0;31"
[2026-02-27 19:52:48] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-27 19:52:48] HOME_URL="https://www.centos.org/"
[2026-02-27 19:52:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-27 19:52:48] 
[2026-02-27 19:52:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-27 19:52:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-27 19:52:48] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-27 19:52:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-27 19:52:48] 
[2026-02-27 19:52:48] 2026-02-28 03:52:16,620 | INFO     | **************************************
[2026-02-27 19:52:48] 2026-02-28 03:52:17,123 | INFO     | executing command: df -mP /home/boinc/slots/0
[2026-02-27 19:52:48] 2026-02-28 03:52:17,270 | INFO     | sufficient remaining disk space (2076013756416 B)
[2026-02-27 19:52:48] 2026-02-28 03:52:17,270 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-27 19:52:48] 2026-02-28 03:52:17,270 | INFO     | current server update state: UPDATING_FINAL
[2026-02-27 19:52:48] 2026-02-28 03:52:17,271 | INFO     | update_server=False
[2026-02-27 19:52:48] 2026-02-28 03:52:17,271 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-27 19:52:48] 2026-02-28 03:52:17,462 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-27 19:52:48] 2026-02-28 03:52:17,594 | INFO     | all data control threads have been joined
[2026-02-27 19:52:48] 2026-02-28 03:52:17,851 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-27 19:52:48] 2026-02-28 03:52:17,851 | INFO     | aborting loop
[2026-02-27 19:52:48] 2026-02-28 03:52:18,125 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-27 19:52:48] 2026-02-28 03:52:18,275 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-27 19:52:48] 2026-02-28 03:52:18,277 | INFO     | [job] retrieve thread has finished
[2026-02-27 19:52:48] 2026-02-28 03:52:18,337 | INFO     | [data] copytool_in thread has finished
[2026-02-27 19:52:48] 2026-02-28 03:52:18,418 | INFO     | [payload] validate_pre thread has finished
[2026-02-27 19:52:48] 2026-02-28 03:52:18,451 | INFO     | all payload control threads have been joined
[2026-02-27 19:52:48] 2026-02-28 03:52:18,483 | INFO     | [payload] validate_post thread has finished
[2026-02-27 19:52:48] 2026-02-28 03:52:18,600 | INFO     | [data] control thread has finished
[2026-02-27 19:52:48] 2026-02-28 03:52:18,625 | INFO     | [payload] failed_post thread has finished
[2026-02-27 19:52:48] 2026-02-28 03:52:18,665 | INFO     | all job control threads have been joined
[2026-02-27 19:52:48] 2026-02-28 03:52:18,857 | INFO     | [job] job monitor thread has finished
[2026-02-27 19:52:48] 2026-02-28 03:52:18,874 | INFO     | [payload] execute_payloads thread has finished
[2026-02-27 19:52:48] 2026-02-28 03:52:19,067 | INFO     | [job] create_data_payload thread has finished
[2026-02-27 19:52:48] 2026-02-28 03:52:19,092 | INFO     | [job] validate thread has finished
[2026-02-27 19:52:48] 2026-02-28 03:52:19,131 | INFO     | [job] queue monitor thread has finished
[2026-02-27 19:52:48] 2026-02-28 03:52:19,457 | INFO     | [payload] control thread has finished
[2026-02-27 19:52:48] 2026-02-28 03:52:19,494 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-27 19:52:48] 2026-02-28 03:52:19,672 | INFO     | [job] control thread has finished
[2026-02-27 19:52:48] 2026-02-28 03:52:20,283 | INFO     | [data] copytool_out thread has finished
[2026-02-27 19:52:48] 2026-02-28 03:52:21,473 | INFO     | [data] queue_monitor thread has finished
[2026-02-27 19:52:48] 2026-02-28 03:52:36,534 | INFO     | [monitor] cgroup control has ended
[2026-02-27 19:52:48] 2026-02-28 03:52:36,644 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139982698571584)>', '<ExcThread(monitor, started 139982127732480)>']
[2026-02-27 19:52:48] 2026-02-28 03:52:41,670 | INFO     | all workflow threads have been joined
[2026-02-27 19:52:48] 2026-02-28 03:52:41,670 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-27 19:52:48] 2026-02-28 03:52:41,671 | INFO     | traces error code: 0
[2026-02-27 19:52:48] 2026-02-28 03:52:41,671 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-27 19:52:48] 2026-02-28 03:52:47,101 | INFO     | PID=3828371 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-27 19:52:48] 2026-02-28 03:52:47,102 | INFO     | .. there are 42 such processes running
[2026-02-27 19:52:48] 2026-02-28 03:52:47,102 | INFO     | found 0 job(s) in 20 queues
[2026-02-27 19:52:48] 2026-02-28 03:52:47,102 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-27 19:52:48] 2026-02-28 03:52:47,102 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-27 19:52:48] 2026-02-28 03:52:47,102 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-27 19:52:48] 2026-02-28 03:52:47,102 | CRITICAL | thread 'MainThread' is not alive
[2026-02-27 19:52:48] 2026-02-28 03:52:47,103 | INFO     | [monitor] control thread has ended
[2026-02-27 19:52:48] 2026-02-28 03:52:47,453 [wrapper] ==== pilot stdout END ====
[2026-02-27 19:52:48] 2026-02-28 03:52:47,481 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-27 19:52:48] 2026-02-28 03:52:47,504 [wrapper] pilotpid: 3828371
[2026-02-27 19:52:48] 2026-02-28 03:52:47,517 [wrapper] Pilot exit status: 0
[2026-02-27 19:52:48] 2026-02-28 03:52:47,643 [wrapper] pandaids: 7032228039
[2026-02-27 19:52:48] 2026-02-28 03:52:48,080 [wrapper] cleanup supervisor_pilot 3828377 3828372
[2026-02-27 19:52:48] 2026-02-28 03:52:48,103 [wrapper] Test setup, not cleaning
[2026-02-27 19:52:48] 2026-02-28 03:52:48,117 [wrapper] apfmon messages muted
[2026-02-27 19:52:48] 2026-02-28 03:52:48,132 [wrapper] ==== wrapper stdout END ====
[2026-02-27 19:52:48] 2026-02-28 03:52:48,146 [wrapper] ==== wrapper stderr END ====
[2026-02-27 19:52:48]  *** Error codes and diagnostics ***
[2026-02-27 19:52:48]     "exeErrorCode": 65,
[2026-02-27 19:52:48]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2026-02-27 19:52:48]     "pilotErrorCode": 1305,
[2026-02-27 19:52:48]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2026-02-27 19:52:48]  *** Listing of results directory ***
[2026-02-27 19:52:49] total 271716
[2026-02-27 19:52:49] -rw-r--r--. 1 boinc boinc    584627 Feb 27 14:54 pilot3.tar.gz
[2026-02-27 19:52:49] -rw-r--r--. 1 boinc boinc      5111 Feb 27 14:55 queuedata.json
[2026-02-27 19:52:49] -rwx------. 1 boinc boinc     36322 Feb 27 14:55 runpilot2-wrapper.sh
[2026-02-27 19:52:49] -rw-r--r--. 1 boinc boinc       100 Feb 27 19:47 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-27 19:52:49] -rwxr-xr-x. 1 boinc boinc      7986 Feb 27 19:47 run_atlas
[2026-02-27 19:52:49] -rw-r--r--. 1 boinc boinc       105 Feb 27 19:47 job.xml
[2026-02-27 19:52:49] -rw-r--r--. 2 boinc boinc 274100709 Feb 27 19:47 EVNT.48343683._000047.pool.root.1
[2026-02-27 19:52:49] -rw-r--r--. 1 boinc boinc      6594 Feb 27 19:47 init_data.xml
[2026-02-27 19:52:49] -rw-r--r--. 2 boinc boinc    597963 Feb 27 19:47 input.tar.gz
[2026-02-27 19:52:49] -rw-r--r--. 2 boinc boinc     15845 Feb 27 19:47 start_atlas.sh
[2026-02-27 19:52:49] drwxrwx--x. 2 boinc boinc      4096 Feb 27 19:47 shared
[2026-02-27 19:52:49] -rw-r--r--. 1 boinc boinc         0 Feb 27 19:47 boinc_lockfile
[2026-02-27 19:52:49] -rw-r--r--. 1 boinc boinc      2563 Feb 27 19:47 pandaJob.out
[2026-02-27 19:52:49] -rw-------. 1 boinc boinc    998782 Feb 27 19:48 agis_schedconf.cvmfs.json
[2026-02-27 19:52:49] -rw-------. 1 boinc boinc   1513015 Feb 27 19:48 agis_ddmendpoints.agis.ALL.json
[2026-02-27 19:52:49] -rw-------. 1 boinc boinc       445 Feb 27 19:48 workernode_map.json
[2026-02-27 19:52:49] drwx------. 5 boinc boinc      4096 Feb 27 19:48 pilot3
[2026-02-27 19:52:49] -rw-r--r--. 1 boinc boinc       524 Feb 27 19:49 boinc_task_state.xml
[2026-02-27 19:52:49] -rw-------. 1 boinc boinc       968 Feb 27 19:50 memory_monitor_summary.json
[2026-02-27 19:52:49] -rw-------. 1 boinc boinc     21202 Feb 27 19:50 log.48838521._001102.job.log.tgz.1
[2026-02-27 19:52:49] -rw-------. 1 boinc boinc        95 Feb 27 19:52 pilot_heartbeat.json
[2026-02-27 19:52:49] -rw-------. 1 boinc boinc      7043 Feb 27 19:52 heartbeat.json
[2026-02-27 19:52:49] -rw-r--r--. 1 boinc boinc      8192 Feb 27 19:52 boinc_mmap_file
[2026-02-27 19:52:49] -rw-------. 1 boinc boinc       893 Feb 27 19:52 pilotlog.txt
[2026-02-27 19:52:49] -rw-r--r--. 1 boinc boinc        23 Feb 27 19:52 wrapper_checkpoint.txt
[2026-02-27 19:52:49] -rw-------. 1 boinc boinc     86816 Feb 27 19:52 log.48838521._001102.job.log.1
[2026-02-27 19:52:49] -rw-------. 1 boinc boinc       188 Feb 27 19:52 output.list
[2026-02-27 19:52:49] -rw-r--r--. 1 boinc boinc       620 Feb 27 19:52 runtime_log
[2026-02-27 19:52:49] -rw-------. 1 boinc boinc    122880 Feb 27 19:52 result.tar.gz
[2026-02-27 19:52:49] -rw-------. 1 boinc boinc       643 Feb 27 19:52 xymLDmivLG9n9Rq4apOajLDm4fhM0noT9bVooX4SDmH73KDmlMI3Wo.diag
[2026-02-27 19:52:49] -rw-r--r--. 1 boinc boinc      8635 Feb 27 19:52 runtime_log.err
[2026-02-27 19:52:49] -rw-r--r--. 1 boinc boinc     21773 Feb 27 19:52 stderr.txt
[2026-02-27 19:52:49] No HITS result produced
[2026-02-27 19:52:49]  *** Contents of shared directory: ***
[2026-02-27 19:52:49] total 268404
[2026-02-27 19:52:49] -rw-r--r--. 2 boinc boinc 274100709 Feb 27 19:47 ATLAS.root_0
[2026-02-27 19:52:49] -rw-r--r--. 2 boinc boinc    597963 Feb 27 19:47 input.tar.gz
[2026-02-27 19:52:49] -rw-r--r--. 2 boinc boinc     15845 Feb 27 19:47 start_atlas.sh
[2026-02-27 19:52:49] -rw-------. 1 boinc boinc    122880 Feb 27 19:52 result.tar.gz
19:52:50 (3824192): run_atlas exited; CPU time 35.790622
19:52:50 (3824192): called boinc_finish(0)

</stderr_txt>
]]>

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