Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
2026-02-28 10:53:24 (28164): vboxwrapper version 26210
2026-02-28 10:53:24 (28164): BOINC client version: 8.2.8
2026-02-28 10:53:24 (28164): Detected: VirtualBox VboxManage Interface (Version: 7.2.6)
2026-02-28 10:53:25 (28164): Successfully copied 'init_data.xml' to the shared directory.
2026-02-28 10:53:25 (28164): Create VM. (boinc_8053d23e8da4abf6, slot#2)
2026-02-28 10:53:25 (28164): Setting Memory Size for VM. (4400MB)
2026-02-28 10:53:26 (28164): Setting CPU Count for VM. (4)
2026-02-28 10:53:26 (28164): Setting Chipset Options for VM.
2026-02-28 10:53:26 (28164): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-02-28 10:53:26 (28164): Setting Boot Options for VM.
2026-02-28 10:53:27 (28164): Setting Network Configuration for NAT. (Driver: virtio)
2026-02-28 10:53:27 (28164): Enabling VM Network Access.
2026-02-28 10:53:27 (28164): Disabling USB Support for VM.
2026-02-28 10:53:28 (28164): Disabling COM Port Support for VM.
2026-02-28 10:53:28 (28164): Disabling LPT Port Support for VM.
2026-02-28 10:53:28 (28164): Disabling Audio Support for VM.
2026-02-28 10:53:28 (28164): Disabling Clipboard Support for VM.
2026-02-28 10:53:29 (28164): Disabling Drag and Drop Support for VM.
2026-02-28 10:53:29 (28164): Adding storage controller(s) to VM.
2026-02-28 10:53:29 (28164): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-02-28 10:53:30 (28164): Adding VirtualBox Guest Additions to VM.
2026-02-28 10:53:30 (28164): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-02-28 10:53:30 (28164): forwarding host port 62144 to guest port 80
2026-02-28 10:53:30 (28164): Enabling remote desktop for VM.
2026-02-28 10:53:31 (28164): Required extension pack not installed, remote desktop not enabled.
2026-02-28 10:53:31 (28164): Enabling shared directory for VM.
2026-02-28 10:53:31 (28164): Starting VM using VBoxManage interface. (boinc_8053d23e8da4abf6, slot#2)
2026-02-28 10:53:36 (28164): Successfully started VM. (PID = '29532')
2026-02-28 10:53:36 (28164): Reporting VM Process ID to BOINC.
2026-02-28 10:53:36 (28164): Guest Log: BIOS: VirtualBox 7.2.6
2026-02-28 10:53:36 (28164): Guest Log: CPUID EDX: 0x178bfbff
2026-02-28 10:53:36 (28164): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-02-28 10:53:36 (28164): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-02-28 10:53:36 (28164): VM state change detected. (old = 'poweredoff', new = 'running')
2026-02-28 10:53:36 (28164): Detected: Web Application Enabled (http://localhost:62144)
2026-02-28 10:53:36 (28164): Preference change detected
2026-02-28 10:53:36 (28164): Setting CPU throttle for VM. (90%)
2026-02-28 10:53:36 (28164): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 900 seconds) or (Vbox_job.xml: 900 seconds))
2026-02-28 10:53:38 (28164): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-02-28 10:53:38 (28164): Guest Log: BIOS: Booting from Hard Disk...
2026-02-28 10:53:40 (28164): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-02-28 10:53:40 (28164): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-02-28 10:53:40 (28164): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-02-28 10:53:40 (28164): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-02-28 10:53:40 (28164): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-02-28 10:53:40 (28164): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-02-28 10:53:40 (28164): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-02-28 10:53:40 (28164): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-02-28 10:53:40 (28164): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-02-28 10:53:40 (28164): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-02-28 10:53:40 (28164): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-02-28 10:53:40 (28164): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-02-28 10:53:40 (28164): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-02-28 10:53:40 (28164): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-02-28 10:53:40 (28164): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-02-28 10:53:40 (28164): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-02-28 10:53:40 (28164): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-02-28 10:53:40 (28164): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-02-28 10:53:40 (28164): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-02-28 10:53:40 (28164): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-02-28 10:53:40 (28164): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-02-28 10:53:40 (28164): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-02-28 10:53:40 (28164): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-02-28 10:53:40 (28164): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-02-28 10:53:40 (28164): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-02-28 10:53:40 (28164): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-02-28 10:53:40 (28164): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-02-28 10:53:40 (28164): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-02-28 10:53:40 (28164): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-02-28 10:53:40 (28164): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-02-28 10:53:40 (28164): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-02-28 10:53:40 (28164): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-02-28 10:53:44 (28164): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-02-28 10:53:44 (28164): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-02-28 10:53:48 (28164): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-02-28 10:53:48 (28164): Guest Log: 00:00:00.000169 main     Log opened 2026-02-28T10:53:46.479923000Z
2026-02-28 10:53:48 (28164): Guest Log: 00:00:00.000269 main     OS Product: Linux
2026-02-28 10:53:48 (28164): Guest Log: 00:00:00.000285 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-02-28 10:53:48 (28164): Guest Log: 00:00:00.000298 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-02-28 10:53:48 (28164): Guest Log: 00:00:00.000311 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-02-28 10:53:48 (28164): Guest Log: 00:00:00.000311 main     Process ID: 1305
2026-02-28 10:53:48 (28164): Guest Log: 00:00:00.000311 main     Package type: LINUX_64BITS_GENERIC
2026-02-28 10:53:48 (28164): Guest Log: 00:00:00.000855 main     5.2.32 r132073 started. Verbose level = 0
2026-02-28 10:53:48 (28164): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-02-28 10:53:48 (28164): Guest Log: [INFO] Mounting shared directory
2026-02-28 10:53:48 (28164): Guest Log: [INFO] Checking for init_data.xml
2026-02-28 10:53:58 (28164): Guest Log: 00:00:10.004906 timesync vgsvcTimeSyncWorker: Radical guest time change: -3 588 499 783 000ns (GuestNow=1 772 272 437 983 917 000 ns GuestLast=1 772 276 026 483 700 000 ns fSetTimeLastLoop=true )
2026-02-28 10:55:43 (28164): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-02-28 10:55:43 (28164): Guest Log: [INFO] Detected branch: prod
2026-02-28 10:55:43 (28164): Guest Log: This is the prod version of the ATLAS job wrapper
2026-02-28 10:55:43 (28164): Guest Log: Copying input files
2026-02-28 10:55:44 (28164): Guest Log: Copied input files into RunAtlas.
2026-02-28 10:55:44 (28164): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-02-28 10:55:44 (28164): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-02-28 10:55:44 (28164): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-02-28 10:55:44 (28164): Guest Log: Further information can be found at the LHC@home message board.
2026-02-28 10:55:51 (28164): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-02-28 10:55:51 (28164): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-02-28 10:55:51 (28164): Guest Log: 2.6.3.0 1617 0 30128 156727 4 1 3117743 4096001 0 65024 0 0 n/a 0 0 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2026-02-28 10:55:52 (28164): Guest Log: copied the webapp to /var/www
2026-02-28 10:55:52 (28164): Guest Log: ATHENA_PROC_NUMBER=4
2026-02-28 10:55:52 (28164): Guest Log: ATHENA_CORE_NUMBER=4
2026-02-28 10:55:52 (28164): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-02-28 10:55:52 (28164): Guest Log:  *** Starting ATLAS job. (PandaID=7031924920 taskID=48842833) ***
2026-02-28 12:33:39 (28164): Status Report: Elapsed Time: '6000.000000'
2026-02-28 12:33:39 (28164): Status Report: CPU Time: '19829.515625'
2026-02-28 14:13:41 (28164): Status Report: Elapsed Time: '12000.000000'
2026-02-28 14:13:41 (28164): Status Report: CPU Time: '41339.093750'
2026-02-28 15:26:44 (28164): Guest Log:  *** Job finished ***
2026-02-28 15:26:44 (28164): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-02-28 15:26:44 (28164): Guest Log: 2026-02-28 14:26:37,167 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-02-28 15:26:44 (28164): Guest Log: 2026-02-28 14:26:37,167 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-02-28 15:26:44 (28164): Guest Log: 2026-02-28 14:26:49,303 | INFO     | [monitor] cgroup control has ended
2026-02-28 15:26:44 (28164): Guest Log: 2026-02-28 14:26:49,858 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139918347753280)>', '<ExcThread(monitor, started 139917510289152)>']
2026-02-28 15:26:44 (28164): Guest Log: 2026-02-28 14:26:50,381 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-02-28 15:26:44 (28164): Guest Log: 2026-02-28 14:26:50,381 | INFO     | [monitor] control thread has ended
2026-02-28 15:26:44 (28164): Guest Log: 2026-02-28 14:26:54,870 | INFO     | all workflow threads have been joined
2026-02-28 15:26:44 (28164): Guest Log: 2026-02-28 14:26:54,870 | INFO     | end of generic workflow (traces error code: 0)
2026-02-28 15:26:44 (28164): Guest Log: 2026-02-28 14:26:54,870 | INFO     | traces error code: 0
2026-02-28 15:26:44 (28164): Guest Log: 2026-02-28 14:26:54,870 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-02-28 15:26:44 (28164): Guest Log: 2026-02-28 14:26:54,967 [wrapper] ==== pilot stdout END ====
2026-02-28 15:26:44 (28164): Guest Log: 2026-02-28 14:26:54,971 [wrapper] ==== wrapper stdout RESUME ====
2026-02-28 15:26:44 (28164): Guest Log: 2026-02-28 14:26:54,974 [wrapper] pilotpid: 6014
2026-02-28 15:26:44 (28164): Guest Log: 2026-02-28 14:26:54,977 [wrapper] Pilot exit status: 0
2026-02-28 15:26:44 (28164): Guest Log: 2026-02-28 14:26:55,087 [wrapper] pandaids: 7031924920
2026-02-28 15:26:44 (28164): Guest Log: 2026-02-28 14:26:55,106 [wrapper] cleanup supervisor_pilot 28932 6015
2026-02-28 15:26:44 (28164): Guest Log: 2026-02-28 14:26:55,109 [wrapper] Test setup, not cleaning
2026-02-28 15:26:44 (28164): Guest Log: 2026-02-28 14:26:55,112 [wrapper] apfmon messages muted
2026-02-28 15:26:44 (28164): Guest Log: 2026-02-28 14:26:55,116 [wrapper] ==== wrapper stdout END ====
2026-02-28 15:26:44 (28164): Guest Log: 2026-02-28 14:26:55,120 [wrapper] ==== wrapper stderr END ====
2026-02-28 15:26:44 (28164): Guest Log:  *** Error codes and diagnostics ***
2026-02-28 15:26:44 (28164): Guest Log:     "exeErrorCode": 0,
2026-02-28 15:26:44 (28164): Guest Log:     "exeErrorDiag": "",
2026-02-28 15:26:44 (28164): Guest Log:     "pilotErrorCode": 0,
2026-02-28 15:26:44 (28164): Guest Log:     "pilotErrorDiag": "",
2026-02-28 15:26:44 (28164): Guest Log:  *** Listing of results directory ***
2026-02-28 15:26:44 (28164): Guest Log: total 280192
2026-02-28 15:26:44 (28164): Guest Log: -rw-r--r--. 1 atlas atlas    584627 Feb 27 16:20 pilot3.tar.gz
2026-02-28 15:26:44 (28164): Guest Log: -rwx------. 1 atlas atlas     36322 Feb 27 16:21 runpilot2-wrapper.sh
2026-02-28 15:26:44 (28164): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Feb 27 16:22 queuedata.json
2026-02-28 15:26:44 (28164): Guest Log: -rwxr-xr-x. 1 atlas atlas      8617 Feb 28 09:55 init_data.xml
2026-02-28 15:26:44 (28164): Guest Log: -rwxr-xr-x. 1 atlas atlas    597979 Feb 28 09:55 input.tar.gz
2026-02-28 15:26:44 (28164): Guest Log: -rwxr-xr-x. 1 atlas atlas     15845 Feb 28 09:55 start_atlas.sh
2026-02-28 15:26:44 (28164): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Feb 28 09:55 EVNT.48449418._000002.pool.root.1 -> /data/./ATLAS.root_0
2026-02-28 15:26:44 (28164): Guest Log: -rw-r--r--. 1 atlas atlas      2616 Feb 28 09:55 pandaJob.out
2026-02-28 15:26:44 (28164): Guest Log: -rw-------. 1 atlas atlas    998790 Feb 28 09:56 agis_schedconf.cvmfs.json
2026-02-28 15:26:44 (28164): Guest Log: -rw-------. 1 atlas atlas       422 Feb 28 09:56 workernode_map.json
2026-02-28 15:26:44 (28164): Guest Log: drwx------. 5 atlas atlas      4096 Feb 28 09:56 pilot3
2026-02-28 15:26:44 (28164): Guest Log: -rw-------. 1 atlas atlas 277726641 Feb 28 14:25 HITS.48842833._000033.pool.root.1
2026-02-28 15:26:44 (28164): Guest Log: -rw-------. 1 atlas atlas      1029 Feb 28 14:25 memory_monitor_summary.json
2026-02-28 15:26:44 (28164): Guest Log: -rw-------. 1 atlas atlas   1513015 Feb 28 14:26 agis_ddmendpoints.agis.ALL.json
2026-02-28 15:26:44 (28164): Guest Log: -rw-------. 1 atlas atlas    419224 Feb 28 14:26 log.48842833._000033.job.log.tgz.1
2026-02-28 15:26:44 (28164): Guest Log: -rw-------. 1 atlas atlas      6328 Feb 28 14:26 heartbeat.json
2026-02-28 15:26:44 (28164): Guest Log: -rw-------. 1 atlas atlas        95 Feb 28 14:26 pilot_heartbeat.json
2026-02-28 15:26:44 (28164): Guest Log: -rw-------. 1 atlas atlas      4801 Feb 28 14:26 pilotlog.txt
2026-02-28 15:26:44 (28164): Guest Log: -rw-------. 1 atlas atlas   2246823 Feb 28 14:26 log.48842833._000033.job.log.1
2026-02-28 15:26:44 (28164): Guest Log: -rw-------. 1 atlas atlas       357 Feb 28 14:26 output.list
2026-02-28 15:26:44 (28164): Guest Log: -rw-r--r--. 1 atlas atlas       620 Feb 28 14:26 runtime_log
2026-02-28 15:26:44 (28164): Guest Log: -rw-------. 1 atlas atlas   2682880 Feb 28 14:26 result.tar.gz
2026-02-28 15:26:44 (28164): Guest Log: -rw-r--r--. 1 atlas atlas      8737 Feb 28 14:26 runtime_log.err
2026-02-28 15:26:44 (28164): Guest Log: -rw-------. 1 atlas atlas       654 Feb 28 14:26 ICeNDmZlFG9n9Rq4apOajLDm4fhM0noT9bVooX4SDmfY3KDm2WSSFo.diag
2026-02-28 15:26:44 (28164): Guest Log: Looking for outputfile HITS.48842833._000033.pool.root.1
2026-02-28 15:26:44 (28164): Guest Log: HITS file was successfully produced
2026-02-28 15:26:44 (28164): Guest Log: -rw-------. 1 atlas atlas 277726641 Feb 28 14:25 /home/atlas/RunAtlas/HITS.48842833._000033.pool.root.1
2026-02-28 15:26:45 (28164): Guest Log: Successfully finished the ATLAS job!
2026-02-28 15:26:45 (28164): Guest Log: Copying the results back to the shared directory!
2026-02-28 15:26:45 (28164): Guest Log:  *** Contents of shared directory: ***
2026-02-28 15:26:45 (28164): Guest Log: total 564916
2026-02-28 15:26:45 (28164): Guest Log: -rwxrwxrwx. 1 root root 297434912 Feb 28 09:53 ATLAS.root_0
2026-02-28 15:26:45 (28164): Guest Log: -rwxrwxrwx. 1 root root 277726641 Feb 28 14:26 HITS.pool.root.1
2026-02-28 15:26:45 (28164): Guest Log: -rwxrwxrwx. 1 root root      8617 Feb 28 09:53 init_data.xml
2026-02-28 15:26:45 (28164): Guest Log: -rwxrwxrwx. 1 root root    597979 Feb 27 21:40 input.tar.gz
2026-02-28 15:26:45 (28164): Guest Log: -rwxrwxrwx. 1 root root   2682880 Feb 28 14:26 result.tar.gz
2026-02-28 15:26:45 (28164): Guest Log: -rwxrwxrwx. 1 root root     15845 Feb 27 21:40 start_atlas.sh
2026-02-28 15:26:45 (28164): Guest Log:  *** Success! Shutting down the machine. ***
2026-02-28 15:26:45 (28164): VM Completion File Detected.
2026-02-28 15:26:45 (28164): Powering off VM.
2026-02-28 15:26:45 (28164): Successfully stopped VM.
2026-02-28 15:26:45 (28164): Deregistering VM. (boinc_8053d23e8da4abf6, slot#2)
2026-02-28 15:26:45 (28164): Removing network bandwidth throttle group from VM.
2026-02-28 15:26:46 (28164): Removing VM from VirtualBox.
2026-02-28 15:26:51 (28164): called boinc_finish(0)

</stderr_txt>
]]>

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