Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
06:13:30 (4061659): wrapper (7.7.26015): starting
06:13:30 (4061659): wrapper: running run_atlas (--nthreads 4)
[2026-02-28 06:13:30] Arguments: --nthreads 4
[2026-02-28 06:13:30] Threads: 4
[2026-02-28 06:13:30] Checking for CVMFS
[2026-02-28 06:13:30] No cvmfs_config command found, will try listing directly
[2026-02-28 06:13:30] CVMFS is ok
[2026-02-28 06:13:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-28 06:13:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-28 06:13:30] Further information can be found at the LHC@home message board.
[2026-02-28 06:13:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-28 06:13:30] Checking for apptainer binary...
[2026-02-28 06:13:30] which: no apptainer in ((null))
[2026-02-28 06:13:30] apptainer is not installed, using version from CVMFS
[2026-02-28 06:13:30] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-28 06:13:30] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot64/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut11.grid.cesnet.cz
[2026-02-28 06:13:30] apptainer works
[2026-02-28 06:13:30] Set ATHENA_PROC_NUMBER=4
[2026-02-28 06:13:30] Set ATHENA_CORE_NUMBER=4
[2026-02-28 06:13:30] Starting ATLAS job with PandaID=7031990039
[2026-02-28 06:13:30] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot64/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-28 09:14:14]  *** The last 200 lines of the pilot log: ***
[2026-02-28 09:14:14] 2026-02-28 08:13:10,167 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_2720229/.job.ad'
[2026-02-28 09:14:14] 2026-02-28 08:13:10,167 | INFO     | total number of processed events: 400 (read)
[2026-02-28 09:14:14] 2026-02-28 08:13:10,191 | INFO     | using path: /scratch/boinc/var/slot64/slots/0/PanDA_Pilot-7031990039/memory_monitor_summary.json (trf name=prmon)
[2026-02-28 09:14:14] 2026-02-28 08:13:10,191 | INFO     | extracted standard info from prmon json
[2026-02-28 09:14:14] 2026-02-28 08:13:10,192 | INFO     | extracted standard memory fields from prmon json
[2026-02-28 09:14:14] 2026-02-28 08:13:10,192 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-28 09:14:14] 2026-02-28 08:13:10,192 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-28 09:14:14] 2026-02-28 08:13:10,192 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-28 09:14:14] 2026-02-28 08:13:10,195 | INFO     | fitting pss+swap vs Time
[2026-02-28 09:14:14] 2026-02-28 08:13:10,196 | INFO     | sum of square deviations: 1690450300.0
[2026-02-28 09:14:14] 2026-02-28 08:13:10,197 | INFO     | sum of deviations: -783039737.0
[2026-02-28 09:14:14] 2026-02-28 08:13:10,197 | INFO     | mean x: 1772260994.5
[2026-02-28 09:14:14] 2026-02-28 08:13:10,197 | INFO     | mean y: 2363397.0
[2026-02-28 09:14:14] 2026-02-28 08:13:10,197 | INFO     | intersect: 823298968.4442704
[2026-02-28 09:14:14] 2026-02-28 08:13:10,197 | INFO     | chi2: 1.2427369549080043
[2026-02-28 09:14:14] 2026-02-28 08:13:10,198 | INFO     | sum of square deviations: 1550429070.0
[2026-02-28 09:14:14] 2026-02-28 08:13:10,199 | INFO     | sum of deviations: -590928227.9999977
[2026-02-28 09:14:14] 2026-02-28 08:13:10,199 | INFO     | mean x: 1772260842.0
[2026-02-28 09:14:14] 2026-02-28 08:13:10,199 | INFO     | mean y: 2363606.2748538014
[2026-02-28 09:14:14] 2026-02-28 08:13:10,199 | INFO     | intersect: 677840465.6689079
[2026-02-28 09:14:14] 2026-02-28 08:13:10,199 | INFO     | chi2: 1.2430060378532342
[2026-02-28 09:14:14] 2026-02-28 08:13:10,199 | INFO     | current chi2=1.2430060378532342 (change=-0.021652445770375416 %)
[2026-02-28 09:14:14] 2026-02-28 08:13:10,200 | INFO     | right removable region: 170
[2026-02-28 09:14:14] 2026-02-28 08:13:10,200 | INFO     | sum of square deviations: 1550429070.0
[2026-02-28 09:14:14] 2026-02-28 08:13:10,201 | INFO     | sum of deviations: -18998599084.0
[2026-02-28 09:14:14] 2026-02-28 08:13:10,202 | INFO     | mean x: 1772261147.0
[2026-02-28 09:14:14] 2026-02-28 08:13:10,202 | INFO     | mean y: 2382852.7485380117
[2026-02-28 09:14:14] 2026-02-28 08:13:10,202 | INFO     | intersect: 21719260880.585693
[2026-02-28 09:14:14] 2026-02-28 08:13:10,202 | INFO     | chi2: 0.03489038834910373
[2026-02-28 09:14:14] 2026-02-28 08:13:10,202 | INFO     | current chi2=0.03489038834910373 (change=97.19245587641784 %)
[2026-02-28 09:14:14] 2026-02-28 08:13:10,203 | INFO     | sum of square deviations: 1418361477.5
[2026-02-28 09:14:14] 2026-02-28 08:13:10,204 | INFO     | sum of deviations: -18184899771.0
[2026-02-28 09:14:14] 2026-02-28 08:13:10,204 | INFO     | mean x: 1772261299.5
[2026-02-28 09:14:14] 2026-02-28 08:13:10,204 | INFO     | mean y: 2381884.7108433736
[2026-02-28 09:14:14] 2026-02-28 08:13:10,204 | INFO     | intersect: 22724653048.07844
[2026-02-28 09:14:14] 2026-02-28 08:13:10,204 | INFO     | chi2: 0.030830750118980812
[2026-02-28 09:14:14] 2026-02-28 08:13:10,204 | INFO     | current chi2=0.030830750118980812 (change=11.635405686813474 %)
[2026-02-28 09:14:14] 2026-02-28 08:13:10,204 | INFO     | left removable region: 20
[2026-02-28 09:14:14] 2026-02-28 08:13:10,205 | INFO     | sum of square deviations: 1046484737.5
[2026-02-28 09:14:14] 2026-02-28 08:13:10,206 | INFO     | sum of deviations: -11716598667.999998
[2026-02-28 09:14:14] 2026-02-28 08:13:10,206 | INFO     | mean x: 1772261421.5
[2026-02-28 09:14:14] 2026-02-28 08:13:10,206 | INFO     | mean y: 2375044.466666667
[2026-02-28 09:14:14] 2026-02-28 08:13:10,206 | INFO     | intersect: 19844877344.214428
[2026-02-28 09:14:14] 2026-02-28 08:13:10,206 | INFO     | chi2: 0.022313165051240074
[2026-02-28 09:14:14] 2026-02-28 08:13:10,206 | INFO     | current memory leak: -11.20 B/s (using 150 data points, chi2=0.02)
[2026-02-28 09:14:14] 2026-02-28 08:13:10,207 | INFO     | could have reported an average CPU frequency of 2767 MHz (9 samples)
[2026-02-28 09:14:14] 2026-02-28 08:13:10,207 | INFO     | ..............................
[2026-02-28 09:14:14] 2026-02-28 08:13:10,208 | INFO     | . Timing measurements:
[2026-02-28 09:14:14] 2026-02-28 08:13:10,208 | INFO     | . get job = 0 s
[2026-02-28 09:14:14] 2026-02-28 08:13:10,208 | INFO     | . initial setup = 7 s
[2026-02-28 09:14:14] 2026-02-28 08:13:10,208 | INFO     | . payload setup = 8 s
[2026-02-28 09:14:14] 2026-02-28 08:13:10,208 | INFO     | . stage-in = 0 s
[2026-02-28 09:14:14] 2026-02-28 08:13:10,208 | INFO     | . payload execution = 10730 s
[2026-02-28 09:14:14] 2026-02-28 08:13:10,208 | INFO     | . stage-out = 0 s
[2026-02-28 09:14:14] 2026-02-28 08:13:10,208 | INFO     | . log creation = 0 s
[2026-02-28 09:14:14] 2026-02-28 08:13:10,208 | INFO     | ..............................
[2026-02-28 09:14:14] 2026-02-28 08:13:10,304 | INFO     | 
[2026-02-28 09:14:14] 2026-02-28 08:13:10,305 | INFO     | job summary report
[2026-02-28 09:14:14] 2026-02-28 08:13:10,305 | INFO     | --------------------------------------------------
[2026-02-28 09:14:14] 2026-02-28 08:13:10,305 | INFO     | PanDA job id: 7031990039
[2026-02-28 09:14:14] 2026-02-28 08:13:10,305 | INFO     | task id: 48838432
[2026-02-28 09:14:14] 2026-02-28 08:13:10,305 | INFO     | errors: (none)
[2026-02-28 09:14:14] 2026-02-28 08:13:10,305 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-28 09:14:14] 2026-02-28 08:13:10,305 | INFO     | pilot state: finished 
[2026-02-28 09:14:14] 2026-02-28 08:13:10,305 | INFO     | transexitcode: 0
[2026-02-28 09:14:14] 2026-02-28 08:13:10,305 | INFO     | exeerrorcode: 0
[2026-02-28 09:14:14] 2026-02-28 08:13:10,306 | INFO     | exeerrordiag: 
[2026-02-28 09:14:14] 2026-02-28 08:13:10,306 | INFO     | exitcode: 0
[2026-02-28 09:14:14] 2026-02-28 08:13:10,306 | INFO     | exitmsg: OK
[2026-02-28 09:14:14] 2026-02-28 08:13:10,306 | INFO     | cpuconsumptiontime: 41495 s
[2026-02-28 09:14:14] 2026-02-28 08:13:10,306 | INFO     | nevents: 400
[2026-02-28 09:14:14] 2026-02-28 08:13:10,306 | INFO     | neventsw: 0
[2026-02-28 09:14:14] 2026-02-28 08:13:10,306 | INFO     | pid: 4070683
[2026-02-28 09:14:14] 2026-02-28 08:13:10,306 | INFO     | pgrp: 4070683
[2026-02-28 09:14:14] 2026-02-28 08:13:10,306 | INFO     | corecount: 4
[2026-02-28 09:14:14] 2026-02-28 08:13:10,306 | INFO     | event service: False
[2026-02-28 09:14:14] 2026-02-28 08:13:10,306 | INFO     | sizes: {0: 2281870, 1: 2282331, 12: 2282331, 10742: 2311775, 10743: 2320795, 10746: 2320851, 10748: 2321237}
[2026-02-28 09:14:14] 2026-02-28 08:13:10,307 | INFO     | --------------------------------------------------
[2026-02-28 09:14:14] 2026-02-28 08:13:10,307 | INFO     | 
[2026-02-28 09:14:14] 2026-02-28 08:13:10,307 | INFO     | executing command: ls -lF /scratch/boinc/var/slot64/slots/0
[2026-02-28 09:14:14] 2026-02-28 08:13:10,345 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-28 09:14:14] 2026-02-28 08:13:10,346 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-28 09:14:14] 2026-02-28 08:13:10,346 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-28 09:14:14] 2026-02-28 08:13:10,346 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-28 09:14:14] 2026-02-28 08:13:10,346 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-28 09:14:14] 2026-02-28 08:13:10,346 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-28 09:14:14] 2026-02-28 08:13:10,346 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-28 09:14:14] 2026-02-28 08:13:10,346 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-28 09:14:14] 2026-02-28 08:13:10,346 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-28 09:14:14] 2026-02-28 08:13:10,347 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-28 09:14:14] 2026-02-28 08:13:10,347 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-28 09:14:14] 2026-02-28 08:13:10,347 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-28 09:14:14] 2026-02-28 08:13:10,347 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-28 09:14:14] 2026-02-28 08:13:10,347 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-28 09:14:14] 2026-02-28 08:13:10,347 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-28 09:14:14] 2026-02-28 08:13:10,347 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-28 09:14:14] 2026-02-28 08:13:10,347 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-28 09:14:14] 2026-02-28 08:13:10,347 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-28 09:14:14] 2026-02-28 08:13:10,347 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-28 09:14:14] 2026-02-28 08:13:10,348 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-28 09:14:14] 2026-02-28 08:13:10,348 | INFO     | job 7031990039 has completed (purged errors)
[2026-02-28 09:14:14] 2026-02-28 08:13:10,348 | INFO     | overall cleanup function is called
[2026-02-28 09:14:14] 2026-02-28 08:13:11,357 | INFO     | --- collectZombieJob: --- 10, [4070683]
[2026-02-28 09:14:14] 2026-02-28 08:13:11,361 | INFO     | zombie collector waiting for pid 4070683
[2026-02-28 09:14:14] 2026-02-28 08:13:11,361 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-28 09:14:14] 2026-02-28 08:13:11,361 | INFO     | collected zombie processes
[2026-02-28 09:14:14] 2026-02-28 08:13:11,361 | INFO     | will attempt to kill all subprocesses of pid=4070683
[2026-02-28 09:14:14] 2026-02-28 08:13:12,470 | WARNING  | process 4070683 can no longer be monitored (due to stat problems) - aborting
[2026-02-28 09:14:14] 2026-02-28 08:13:15,373 | INFO     | PID=4065636 has CPU usage=36.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-02-28 09:14:14] 2026-02-28 08:13:15,374 | INFO     | .. there are 19 such processes running
[2026-02-28 09:14:14] 2026-02-28 08:13:15,530 | INFO     | using path: /scratch/boinc/var/slot64/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-02-28 09:14:14] 2026-02-28 08:13:15,645 | INFO     | process IDs to be killed: [4070683] (in reverse order)
[2026-02-28 09:14:14] 2026-02-28 08:13:15,930 | WARNING  | found no corresponding commands to process id(s)
[2026-02-28 09:14:14] 2026-02-28 08:13:15,931 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-28 09:14:14] 2026-02-28 08:13:16,020 | INFO     | did not find any defunct processes belonging to 4070683
[2026-02-28 09:14:14] 2026-02-28 08:13:16,099 | INFO     | did not find any defunct processes belonging to 4070683
[2026-02-28 09:14:14] 2026-02-28 08:13:16,099 | INFO     | ready for new job
[2026-02-28 09:14:14] 2026-02-28 08:13:16,099 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-28 09:14:14] 2026-02-28 08:13:16,103 | INFO     | **************************************
[2026-02-28 09:14:14] 2026-02-28 08:13:16,103 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-28 09:14:14] 2026-02-28 08:13:16,103 | INFO     | **************************************
[2026-02-28 09:14:14] 2026-02-28 08:13:16,103 | INFO     | 
[2026-02-28 09:14:14] 2026-02-28 08:13:16,115 | INFO     | architecture information:
[2026-02-28 09:14:14] 2026-02-28 08:13:16,115 | INFO     | executing command: cat /etc/os-release
[2026-02-28 09:14:14] 2026-02-28 08:13:16,143 | INFO     | cat /etc/os-release:
[2026-02-28 09:14:14] NAME="CentOS Linux"
[2026-02-28 09:14:14] VERSION="7 (Core)"
[2026-02-28 09:14:14] ID="centos"
[2026-02-28 09:14:14] ID_LIKE="rhel fedora"
[2026-02-28 09:14:14] VERSION_ID="7"
[2026-02-28 09:14:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-28 09:14:14] ANSI_COLOR="0;31"
[2026-02-28 09:14:14] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-28 09:14:14] HOME_URL="https://www.centos.org/"
[2026-02-28 09:14:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-28 09:14:14] 
[2026-02-28 09:14:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-28 09:14:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-28 09:14:14] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-28 09:14:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-28 09:14:14] 
[2026-02-28 09:14:14] 2026-02-28 08:13:16,143 | INFO     | **************************************
[2026-02-28 09:14:14] 2026-02-28 08:13:16,437 | INFO     | number of running child processes to parent process 4070683: 1
[2026-02-28 09:14:14] 2026-02-28 08:13:16,438 | INFO     | maximum number of monitored processes: 6
[2026-02-28 09:14:14] 2026-02-28 08:13:16,438 | INFO     | aborting job monitoring since job object (job id=7031990039) has expired
[2026-02-28 09:14:14] 2026-02-28 08:13:16,644 | INFO     | executing command: df -mP /scratch/boinc/var/slot64/slots/0
[2026-02-28 09:14:14] 2026-02-28 08:13:16,675 | INFO     | sufficient remaining disk space (3310974140416 B)
[2026-02-28 09:14:14] 2026-02-28 08:13:16,675 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-28 09:14:14] 2026-02-28 08:13:16,676 | INFO     | current server update state: UPDATING_FINAL
[2026-02-28 09:14:14] 2026-02-28 08:13:16,676 | INFO     | update_server=False
[2026-02-28 09:14:14] 2026-02-28 08:13:16,676 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-28 09:14:14] 2026-02-28 08:13:16,676 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-28 09:14:14] 2026-02-28 08:13:16,677 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-28 09:14:14] 2026-02-28 08:13:16,677 | INFO     | will abort loop
[2026-02-28 09:14:14] 2026-02-28 08:13:16,811 | INFO     | all data control threads have been joined
[2026-02-28 09:14:14] 2026-02-28 08:13:17,643 | INFO     | all job control threads have been joined
[2026-02-28 09:14:14] 2026-02-28 08:13:17,681 | INFO     | [job] retrieve thread has finished
[2026-02-28 09:14:14] 2026-02-28 08:13:17,683 | INFO     | [job] job monitor thread has finished
[2026-02-28 09:14:14] 2026-02-28 08:13:17,813 | INFO     | [data] control thread has finished
[2026-02-28 09:14:14] 2026-02-28 08:13:17,824 | INFO     | all payload control threads have been joined
[2026-02-28 09:14:14] 2026-02-28 08:13:18,014 | INFO     | [job] validate thread has finished
[2026-02-28 09:14:14] 2026-02-28 08:13:18,144 | INFO     | [payload] validate_post thread has finished
[2026-02-28 09:14:14] 2026-02-28 08:13:18,238 | INFO     | [job] create_data_payload thread has finished
[2026-02-28 09:14:14] 2026-02-28 08:13:18,632 | INFO     | [payload] validate_pre thread has finished
[2026-02-28 09:14:14] 2026-02-28 08:13:18,648 | INFO     | [job] control thread has finished
[2026-02-28 09:14:14] 2026-02-28 08:13:18,683 | INFO     | [data] copytool_out thread has finished
[2026-02-28 09:14:14] 2026-02-28 08:13:18,753 | INFO     | [payload] execute_payloads thread has finished
[2026-02-28 09:14:14] 2026-02-28 08:13:18,829 | INFO     | [payload] control thread has finished
[2026-02-28 09:14:14] 2026-02-28 08:13:18,973 | INFO     | [payload] failed_post thread has finished
[2026-02-28 09:14:14] 2026-02-28 08:13:19,065 | INFO     | [data] copytool_in thread has finished
[2026-02-28 09:14:14] 2026-02-28 08:13:19,157 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-28 09:14:14] 2026-02-28 08:13:19,319 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-28 09:14:14] 2026-02-28 08:13:20,325 | INFO     | [job] queue monitor thread has finished
[2026-02-28 09:14:14] 2026-02-28 08:13:23,159 | INFO     | [data] queue_monitor thread has finished
[2026-02-28 09:14:14] 2026-02-28 08:13:26,812 | INFO     | job.realtimelogging is not enabled
[2026-02-28 09:14:14] 2026-02-28 08:13:27,817 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-28 09:14:14] 2026-02-28 08:13:41,961 [wrapper] supervise_pilot (15 min periods counter: 13)
[2026-02-28 09:14:14] 2026-02-28 08:13:48,258 | INFO     | PID=4065636 has CPU usage=8.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-28 09:14:14] 2026-02-28 08:13:48,258 | INFO     | .. there are 19 such processes running
[2026-02-28 09:14:14] 2026-02-28 08:13:48,258 | INFO     | found 0 job(s) in 20 queues
[2026-02-28 09:14:14] 2026-02-28 08:13:48,258 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-28 09:14:14] 2026-02-28 08:13:48,258 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-28 09:14:14] 2026-02-28 08:14:07,090 | INFO     | [monitor] cgroup control has ended
[2026-02-28 09:14:14] 2026-02-28 08:14:08,702 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23199772579648)>', '<ExcThread(monitor, started 23199537710848)>']
[2026-02-28 09:14:14] 2026-02-28 08:14:09,346 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-28 09:14:14] 2026-02-28 08:14:09,346 | INFO     | [monitor] control thread has ended
[2026-02-28 09:14:14] 2026-02-28 08:14:13,727 | INFO     | all workflow threads have been joined
[2026-02-28 09:14:14] 2026-02-28 08:14:13,727 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-28 09:14:14] 2026-02-28 08:14:13,727 | INFO     | traces error code: 0
[2026-02-28 09:14:14] 2026-02-28 08:14:13,728 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-28 09:14:14] 2026-02-28 08:14:13,917 [wrapper] ==== pilot stdout END ====
[2026-02-28 09:14:14] 2026-02-28 08:14:13,925 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-28 09:14:14] 2026-02-28 08:14:13,930 [wrapper] pilotpid: 4065636
[2026-02-28 09:14:14] 2026-02-28 08:14:13,934 [wrapper] Pilot exit status: 0
[2026-02-28 09:14:14] 2026-02-28 08:14:13,949 [wrapper] pandaids: 7031990039
[2026-02-28 09:14:14] 2026-02-28 08:14:14,145 [wrapper] cleanup supervisor_pilot  136524 4065637
[2026-02-28 09:14:14] 2026-02-28 08:14:14,149 [wrapper] Test setup, not cleaning
[2026-02-28 09:14:14] 2026-02-28 08:14:14,156 [wrapper] apfmon messages muted
[2026-02-28 09:14:14] 2026-02-28 08:14:14,160 [wrapper] ==== wrapper stdout END ====
[2026-02-28 09:14:14] 2026-02-28 08:14:14,163 [wrapper] ==== wrapper stderr END ====
[2026-02-28 09:14:14]  *** Error codes and diagnostics ***
[2026-02-28 09:14:14]     "exeErrorCode": 0,
[2026-02-28 09:14:14]     "exeErrorDiag": "",
[2026-02-28 09:14:14]     "pilotErrorCode": 0,
[2026-02-28 09:14:14]     "pilotErrorDiag": "",
[2026-02-28 09:14:14]  *** Listing of results directory ***
[2026-02-28 09:14:14] total 507940
[2026-02-28 09:14:14] -rw-r--r-- 1 boinc boinc    584627 Feb 27 21:35 pilot3.tar.gz
[2026-02-28 09:14:14] -rw-r--r-- 1 boinc boinc      5111 Feb 27 21:36 queuedata.json
[2026-02-28 09:14:14] -rwx------ 1 boinc boinc     36322 Feb 27 21:36 runpilot2-wrapper.sh
[2026-02-28 09:14:14] -rw-r--r-- 1 boinc boinc       100 Feb 28 06:13 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-28 09:14:14] -rwxr-xr-x 1 boinc boinc      7986 Feb 28 06:13 run_atlas
[2026-02-28 09:14:14] -rw-r--r-- 1 boinc boinc       105 Feb 28 06:13 job.xml
[2026-02-28 09:14:14] -rw-r--r-- 2 boinc boinc 284030776 Feb 28 06:13 EVNT.48220101._000147.pool.root.1
[2026-02-28 09:14:14] -rw-r--r-- 1 boinc boinc      6696 Feb 28 06:13 init_data.xml
[2026-02-28 09:14:14] -rw-r--r-- 2 boinc boinc     15845 Feb 28 06:13 start_atlas.sh
[2026-02-28 09:14:14] drwxrwx--x 2 boinc boinc      4096 Feb 28 06:13 shared
[2026-02-28 09:14:14] -rw-r--r-- 2 boinc boinc    597972 Feb 28 06:13 input.tar.gz
[2026-02-28 09:14:14] -rw-r--r-- 1 boinc boinc         0 Feb 28 06:13 boinc_lockfile
[2026-02-28 09:14:14] -rw-r--r-- 1 boinc boinc      2580 Feb 28 06:13 pandaJob.out
[2026-02-28 09:14:14] -rw------- 1 boinc boinc    998782 Feb 28 06:13 agis_schedconf.cvmfs.json
[2026-02-28 09:14:14] -rw------- 1 boinc boinc   1513015 Feb 28 06:13 agis_ddmendpoints.agis.ALL.json
[2026-02-28 09:14:14] -rw------- 1 boinc boinc       443 Feb 28 06:13 workernode_map.json
[2026-02-28 09:14:14] drwx------ 5 boinc boinc      4096 Feb 28 06:13 pilot3
[2026-02-28 09:14:14] -rw------- 1 boinc boinc 228456152 Feb 28 09:12 HITS.48838432._003803.pool.root.1
[2026-02-28 09:14:14] -rw-r--r-- 1 boinc boinc       530 Feb 28 09:12 boinc_task_state.xml
[2026-02-28 09:14:14] -rw------- 1 boinc boinc      1025 Feb 28 09:13 memory_monitor_summary.json
[2026-02-28 09:14:14] -rw------- 1 boinc boinc    342395 Feb 28 09:13 log.48838432._003803.job.log.tgz.1
[2026-02-28 09:14:14] -rw------- 1 boinc boinc      6351 Feb 28 09:13 heartbeat.json
[2026-02-28 09:14:14] -rw------- 1 boinc boinc        95 Feb 28 09:13 pilot_heartbeat.json
[2026-02-28 09:14:14] -rw-r--r-- 1 boinc boinc      8192 Feb 28 09:14 boinc_mmap_file
[2026-02-28 09:14:14] -rw-r--r-- 1 boinc boinc        28 Feb 28 09:14 wrapper_checkpoint.txt
[2026-02-28 09:14:14] -rw------- 1 boinc boinc      5193 Feb 28 09:14 pilotlog.txt
[2026-02-28 09:14:14] -rw------- 1 boinc boinc   1511851 Feb 28 09:14 log.48838432._003803.job.log.1
[2026-02-28 09:14:14] -rw------- 1 boinc boinc       357 Feb 28 09:14 output.list
[2026-02-28 09:14:14] -rw-r--r-- 1 boinc boinc       620 Feb 28 09:14 runtime_log
[2026-02-28 09:14:14] -rw------- 1 boinc boinc   1873920 Feb 28 09:14 result.tar.gz
[2026-02-28 09:14:14] -rw-r--r-- 1 boinc boinc      9205 Feb 28 09:14 runtime_log.err
[2026-02-28 09:14:14] -rw------- 1 boinc boinc       664 Feb 28 09:14 0RBLDmdkJG9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmde5KDmxraTKo.diag
[2026-02-28 09:14:14] -rw-r--r-- 1 boinc boinc     21188 Feb 28 09:14 stderr.txt
[2026-02-28 09:14:14] HITS file was successfully produced:
[2026-02-28 09:14:14] -rw------- 1 boinc boinc 228456152 Feb 28 09:12 shared/HITS.pool.root.1
[2026-02-28 09:14:14]  *** Contents of shared directory: ***
[2026-02-28 09:14:14] total 502920
[2026-02-28 09:14:14] -rw-r--r-- 2 boinc boinc 284030776 Feb 28 06:13 ATLAS.root_0
[2026-02-28 09:14:14] -rw-r--r-- 2 boinc boinc     15845 Feb 28 06:13 start_atlas.sh
[2026-02-28 09:14:14] -rw-r--r-- 2 boinc boinc    597972 Feb 28 06:13 input.tar.gz
[2026-02-28 09:14:14] -rw------- 1 boinc boinc 228456152 Feb 28 09:12 HITS.pool.root.1
[2026-02-28 09:14:14] -rw------- 1 boinc boinc   1873920 Feb 28 09:14 result.tar.gz
09:14:15 (4061659): run_atlas exited; CPU time 42160.818567
09:14:15 (4061659): called boinc_finish(0)

</stderr_txt>
]]>

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