Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:23:19 (28113): wrapper (7.7.26015): starting
02:23:19 (28113): wrapper: running run_atlas (--nthreads 8)
[2026-02-28 02:23:19] Arguments: --nthreads 8
[2026-02-28 02:23:19] Threads: 8
[2026-02-28 02:23:19] Checking for CVMFS
[2026-02-28 02:23:19] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-28 02:25:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-28 02:25:44] Running cvmfs_config stat atlas.cern.ch
[2026-02-28 02:25:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-28 02:25:47] 2.11.2.0 12981 106751 102992 156715 1 50 24331191 25165824 0 130560 72 38941540 99.822 30995836 1660 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://141.99.253.245:3128/ 0
[2026-02-28 02:25:47] CVMFS is ok
[2026-02-28 02:25:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-28 02:25:47] Checking for apptainer binary...
[2026-02-28 02:25:47] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-28 02:25:47] Running /usr/bin/apptainer --version
[2026-02-28 02:25:47] apptainer version 1.3.2-1.el7
[2026-02-28 02:25:47] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-28 02:25:49] cg-vwn366.simple-grid.lan
[2026-02-28 02:25:49] apptainer works
[2026-02-28 02:25:49] Set ATHENA_PROC_NUMBER=8
[2026-02-28 02:25:49] Set ATHENA_CORE_NUMBER=8
[2026-02-28 02:25:49] Starting ATLAS job with PandaID=7031687295
[2026-02-28 02:25:49] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-28 04:44:36]  *** The last 200 lines of the pilot log: ***
[2026-02-28 04:44:36] 2026-02-28 03:43:29,223 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-28 04:44:36] 2026-02-28 03:43:29,226 | INFO     | fitting pss+swap vs Time
[2026-02-28 04:44:36] 2026-02-28 03:43:29,227 | INFO     | sum of square deviations: 729472282.0
[2026-02-28 04:44:36] 2026-02-28 03:43:29,227 | INFO     | sum of deviations: -15040423275.999996
[2026-02-28 04:44:36] 2026-02-28 03:43:29,228 | INFO     | mean x: 1772246148.0
[2026-02-28 04:44:36] 2026-02-28 03:43:29,228 | INFO     | mean y: 2562466.015037594
[2026-02-28 04:44:36] 2026-02-28 03:43:29,228 | INFO     | intersect: 36543131412.78762
[2026-02-28 04:44:36] 2026-02-28 03:43:29,228 | INFO     | chi2: 2.477821596096518
[2026-02-28 04:44:36] 2026-02-28 03:43:29,229 | INFO     | sum of square deviations: 650252192.0
[2026-02-28 04:44:36] 2026-02-28 03:43:29,230 | INFO     | sum of deviations: -5168843753.5
[2026-02-28 04:44:36] 2026-02-28 03:43:29,230 | INFO     | mean x: 1772245995.5
[2026-02-28 04:44:36] 2026-02-28 03:43:29,230 | INFO     | mean y: 2580949.4453125
[2026-02-28 04:44:36] 2026-02-28 03:43:29,230 | INFO     | intersect: 14090134603.559814
[2026-02-28 04:44:36] 2026-02-28 03:43:29,230 | INFO     | chi2: 1.7159009528208893
[2026-02-28 04:44:36] 2026-02-28 03:43:29,231 | INFO     | current chi2=1.7159009528208893 (change=30.749616698632963 %)
[2026-02-28 04:44:36] 2026-02-28 03:43:29,231 | INFO     | sum of square deviations: 576985702.0
[2026-02-28 04:44:36] 2026-02-28 03:43:29,232 | INFO     | sum of deviations: -4351791056.999997
[2026-02-28 04:44:36] 2026-02-28 03:43:29,232 | INFO     | mean x: 1772245843.0
[2026-02-28 04:44:36] 2026-02-28 03:43:29,232 | INFO     | mean y: 2582650.951219512
[2026-02-28 04:44:36] 2026-02-28 03:43:29,232 | INFO     | intersect: 13369367276.010822
[2026-02-28 04:44:36] 2026-02-28 03:43:29,232 | INFO     | chi2: 1.7169859749736691
[2026-02-28 04:44:36] 2026-02-28 03:43:29,233 | INFO     | current chi2=1.7169859749736691 (change=-0.0632333790010485 %)
[2026-02-28 04:44:36] 2026-02-28 03:43:29,233 | INFO     | right removable region: 122
[2026-02-28 04:44:36] 2026-02-28 03:43:29,233 | INFO     | sum of square deviations: 650252192.0
[2026-02-28 04:44:36] 2026-02-28 03:43:29,234 | INFO     | sum of deviations: -36451997560.5
[2026-02-28 04:44:36] 2026-02-28 03:43:29,234 | INFO     | mean x: 1772246300.5
[2026-02-28 04:44:36] 2026-02-28 03:43:29,234 | INFO     | mean y: 2603003.1640625
[2026-02-28 04:44:36] 2026-02-28 03:43:29,234 | INFO     | intersect: 99351622686.94724
[2026-02-28 04:44:36] 2026-02-28 03:43:29,234 | INFO     | chi2: 0.9117290846654015
[2026-02-28 04:44:36] 2026-02-28 03:43:29,235 | INFO     | current chi2=0.9117290846654015 (change=63.20440962732301 %)
[2026-02-28 04:44:36] 2026-02-28 03:43:29,235 | INFO     | sum of square deviations: 576985702.0
[2026-02-28 04:44:36] 2026-02-28 03:43:29,236 | INFO     | sum of deviations: -33703846330.999977
[2026-02-28 04:44:36] 2026-02-28 03:43:29,236 | INFO     | mean x: 1772246453.0
[2026-02-28 04:44:36] 2026-02-28 03:43:29,236 | INFO     | mean y: 2597261.0325203254
[2026-02-28 04:44:36] 2026-02-28 03:43:29,236 | INFO     | intersect: 103525998110.52492
[2026-02-28 04:44:36] 2026-02-28 03:43:29,236 | INFO     | chi2: 0.9115840098738955
[2026-02-28 04:44:36] 2026-02-28 03:43:29,237 | INFO     | current chi2=0.9115840098738955 (change=0.015912050404663862 %)
[2026-02-28 04:44:36] 2026-02-28 03:43:29,237 | INFO     | left removable region: 20
[2026-02-28 04:44:36] 2026-02-28 03:43:29,237 | INFO     | sum of square deviations: 329031285.5
[2026-02-28 04:44:36] 2026-02-28 03:43:29,238 | INFO     | sum of deviations: -15908197930.000002
[2026-02-28 04:44:36] 2026-02-28 03:43:29,238 | INFO     | mean x: 1772246422.5
[2026-02-28 04:44:36] 2026-02-28 03:43:29,238 | INFO     | mean y: 2605019.68627451
[2026-02-28 04:44:36] 2026-02-28 03:43:29,238 | INFO     | intersect: 85688216425.97429
[2026-02-28 04:44:36] 2026-02-28 03:43:29,238 | INFO     | chi2: 0.09796819317422538
[2026-02-28 04:44:36] 2026-02-28 03:43:29,238 | INFO     | current memory leak: -48.35 B/s (using 102 data points, chi2=0.10)
[2026-02-28 04:44:36] 2026-02-28 03:43:29,239 | INFO     | could have reported an average CPU frequency of 1999 MHz (8 samples)
[2026-02-28 04:44:36] 2026-02-28 03:43:29,239 | INFO     | ..............................
[2026-02-28 04:44:36] 2026-02-28 03:43:29,239 | INFO     | . Timing measurements:
[2026-02-28 04:44:36] 2026-02-28 03:43:29,239 | INFO     | . get job = 0 s
[2026-02-28 04:44:36] 2026-02-28 03:43:29,239 | INFO     | . initial setup = 6 s
[2026-02-28 04:44:36] 2026-02-28 03:43:29,240 | INFO     | . payload setup = 6 s
[2026-02-28 04:44:36] 2026-02-28 03:43:29,240 | INFO     | . stage-in = 0 s
[2026-02-28 04:44:36] 2026-02-28 03:43:29,240 | INFO     | . payload execution = 8084 s
[2026-02-28 04:44:36] 2026-02-28 03:43:29,240 | INFO     | . stage-out = 1 s
[2026-02-28 04:44:36] 2026-02-28 03:43:29,240 | INFO     | . log creation = 0 s
[2026-02-28 04:44:36] 2026-02-28 03:43:29,240 | INFO     | ..............................
[2026-02-28 04:44:36] 2026-02-28 03:43:29,395 | INFO     | time since job start (8111s) is within the limit (349056.0s)
[2026-02-28 04:44:36] 2026-02-28 03:43:29,413 | WARNING  | process 4191 can no longer be monitored (due to stat problems) - aborting
[2026-02-28 04:44:36] 2026-02-28 03:43:29,413 | INFO     | using path: /var/lib/boinc/slots/6/PanDA_Pilot-7031687295/memory_monitor_summary.json (trf name=prmon)
[2026-02-28 04:44:36] 2026-02-28 03:43:29,473 | INFO     | number of running child processes to parent process 4191: 1
[2026-02-28 04:44:36] 2026-02-28 03:43:29,473 | INFO     | maximum number of monitored processes: 6
[2026-02-28 04:44:36] 2026-02-28 03:43:29,474 | INFO     | aborting job monitoring since job object (job id=7031687295) has expired
[2026-02-28 04:44:36] 2026-02-28 03:43:29,856 | INFO     | 
[2026-02-28 04:44:36] 2026-02-28 03:43:29,856 | INFO     | job summary report
[2026-02-28 04:44:36] 2026-02-28 03:43:29,856 | INFO     | --------------------------------------------------
[2026-02-28 04:44:36] 2026-02-28 03:43:29,856 | INFO     | PanDA job id: 7031687295
[2026-02-28 04:44:36] 2026-02-28 03:43:29,856 | INFO     | task id: 48838416
[2026-02-28 04:44:36] 2026-02-28 03:43:29,856 | INFO     | errors: (none)
[2026-02-28 04:44:36] 2026-02-28 03:43:29,857 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-28 04:44:36] 2026-02-28 03:43:29,857 | INFO     | pilot state: finished 
[2026-02-28 04:44:36] 2026-02-28 03:43:29,857 | INFO     | transexitcode: 0
[2026-02-28 04:44:36] 2026-02-28 03:43:29,857 | INFO     | exeerrorcode: 0
[2026-02-28 04:44:36] 2026-02-28 03:43:29,857 | INFO     | exeerrordiag: 
[2026-02-28 04:44:36] 2026-02-28 03:43:29,857 | INFO     | exitcode: 0
[2026-02-28 04:44:36] 2026-02-28 03:43:29,857 | INFO     | exitmsg: OK
[2026-02-28 04:44:36] 2026-02-28 03:43:29,857 | INFO     | cpuconsumptiontime: 60917 s
[2026-02-28 04:44:36] 2026-02-28 03:43:29,857 | INFO     | nevents: 400
[2026-02-28 04:44:36] 2026-02-28 03:43:29,857 | INFO     | neventsw: 0
[2026-02-28 04:44:36] 2026-02-28 03:43:29,858 | INFO     | pid: 4191
[2026-02-28 04:44:36] 2026-02-28 03:43:29,858 | INFO     | pgrp: 4191
[2026-02-28 04:44:36] 2026-02-28 03:43:29,858 | INFO     | corecount: 8
[2026-02-28 04:44:36] 2026-02-28 03:43:29,858 | INFO     | event service: False
[2026-02-28 04:44:36] 2026-02-28 03:43:29,858 | INFO     | sizes: {0: 2282073, 1: 2282307, 11: 2282307, 8095: 2310051, 8097: 2319105, 8100: 2319243}
[2026-02-28 04:44:36] 2026-02-28 03:43:29,858 | INFO     | --------------------------------------------------
[2026-02-28 04:44:36] 2026-02-28 03:43:29,858 | INFO     | 
[2026-02-28 04:44:36] 2026-02-28 03:43:29,858 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2026-02-28 04:44:36] 2026-02-28 03:43:29,885 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-28 04:44:36] 2026-02-28 03:43:29,885 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-28 04:44:36] 2026-02-28 03:43:29,885 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-28 04:44:36] 2026-02-28 03:43:29,886 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-28 04:44:36] 2026-02-28 03:43:29,886 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-28 04:44:36] 2026-02-28 03:43:29,886 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-28 04:44:36] 2026-02-28 03:43:29,886 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-28 04:44:36] 2026-02-28 03:43:29,886 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-28 04:44:36] 2026-02-28 03:43:29,886 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-28 04:44:36] 2026-02-28 03:43:29,886 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-28 04:44:36] 2026-02-28 03:43:29,886 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-28 04:44:36] 2026-02-28 03:43:29,886 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-28 04:44:36] 2026-02-28 03:43:29,886 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-28 04:44:36] 2026-02-28 03:43:29,887 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-28 04:44:36] 2026-02-28 03:43:29,887 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-28 04:44:36] 2026-02-28 03:43:29,887 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-28 04:44:36] 2026-02-28 03:43:29,887 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-28 04:44:36] 2026-02-28 03:43:29,887 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-28 04:44:36] 2026-02-28 03:43:29,887 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-28 04:44:36] 2026-02-28 03:43:29,887 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-28 04:44:36] 2026-02-28 03:43:29,887 | INFO     | job 7031687295 has completed (purged errors)
[2026-02-28 04:44:36] 2026-02-28 03:43:29,888 | INFO     | overall cleanup function is called
[2026-02-28 04:44:36] 2026-02-28 03:43:30,896 | INFO     | --- collectZombieJob: --- 10, [4191]
[2026-02-28 04:44:36] 2026-02-28 03:43:30,897 | INFO     | zombie collector waiting for pid 4191
[2026-02-28 04:44:36] 2026-02-28 03:43:30,897 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-28 04:44:36] 2026-02-28 03:43:30,897 | INFO     | collected zombie processes
[2026-02-28 04:44:36] 2026-02-28 03:43:30,897 | INFO     | will attempt to kill all subprocesses of pid=4191
[2026-02-28 04:44:36] 2026-02-28 03:43:30,952 | INFO     | process IDs to be killed: [4191] (in reverse order)
[2026-02-28 04:44:36] 2026-02-28 03:43:30,999 | WARNING  | found no corresponding commands to process id(s)
[2026-02-28 04:44:36] 2026-02-28 03:43:31,000 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-28 04:44:36] 2026-02-28 03:43:31,001 | INFO     | did not find any defunct processes belonging to 4191
[2026-02-28 04:44:36] 2026-02-28 03:43:31,003 | INFO     | did not find any defunct processes belonging to 4191
[2026-02-28 04:44:36] 2026-02-28 03:43:31,003 | INFO     | ready for new job
[2026-02-28 04:44:36] 2026-02-28 03:43:31,003 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-28 04:44:36] 2026-02-28 03:43:31,005 | INFO     | **************************************
[2026-02-28 04:44:36] 2026-02-28 03:43:31,005 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-28 04:44:36] 2026-02-28 03:43:31,005 | INFO     | **************************************
[2026-02-28 04:44:36] 2026-02-28 03:43:31,005 | INFO     | 
[2026-02-28 04:44:36] 2026-02-28 03:43:31,006 | INFO     | pilot is running in a VM
[2026-02-28 04:44:36] 2026-02-28 03:43:31,006 | INFO     | architecture information:
[2026-02-28 04:44:36] 2026-02-28 03:43:31,007 | INFO     | executing command: cat /etc/os-release
[2026-02-28 04:44:36] 2026-02-28 03:43:31,026 | INFO     | cat /etc/os-release:
[2026-02-28 04:44:36] NAME="CentOS Linux"
[2026-02-28 04:44:36] VERSION="7 (Core)"
[2026-02-28 04:44:36] ID="centos"
[2026-02-28 04:44:36] ID_LIKE="rhel fedora"
[2026-02-28 04:44:36] VERSION_ID="7"
[2026-02-28 04:44:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-28 04:44:36] ANSI_COLOR="0;31"
[2026-02-28 04:44:36] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-28 04:44:36] HOME_URL="https://www.centos.org/"
[2026-02-28 04:44:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-28 04:44:36] 
[2026-02-28 04:44:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-28 04:44:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-28 04:44:36] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-28 04:44:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-28 04:44:36] 
[2026-02-28 04:44:36] 2026-02-28 03:43:31,026 | INFO     | **************************************
[2026-02-28 04:44:36] 2026-02-28 03:43:31,529 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2026-02-28 04:44:36] 2026-02-28 03:43:31,551 | INFO     | sufficient remaining disk space (497621663744 B)
[2026-02-28 04:44:36] 2026-02-28 03:43:31,551 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-28 04:44:36] 2026-02-28 03:43:31,551 | INFO     | current server update state: UPDATING_FINAL
[2026-02-28 04:44:36] 2026-02-28 03:43:31,552 | INFO     | update_server=False
[2026-02-28 04:44:36] 2026-02-28 03:43:31,552 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-28 04:44:36] 2026-02-28 03:43:31,900 | INFO     | all data control threads have been joined
[2026-02-28 04:44:36] 2026-02-28 03:43:31,977 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-02-28 04:44:36] 2026-02-28 03:43:31,977 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-02-28 04:44:36] 2026-02-28 03:43:31,978 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-28 04:44:36] 2026-02-28 03:43:31,978 | INFO     | will abort loop
[2026-02-28 04:44:36] 2026-02-28 03:43:32,042 | INFO     | all job control threads have been joined
[2026-02-28 04:44:36] 2026-02-28 03:43:32,207 | INFO     | all payload control threads have been joined
[2026-02-28 04:44:36] 2026-02-28 03:43:32,454 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-28 04:44:36] 2026-02-28 03:43:32,557 | INFO     | [job] retrieve thread has finished
[2026-02-28 04:44:36] 2026-02-28 03:43:32,705 | INFO     | [payload] validate_pre thread has finished
[2026-02-28 04:44:36] 2026-02-28 03:43:32,827 | INFO     | [payload] execute_payloads thread has finished
[2026-02-28 04:44:36] 2026-02-28 03:43:32,906 | INFO     | [data] control thread has finished
[2026-02-28 04:44:36] 2026-02-28 03:43:32,983 | INFO     | [job] job monitor thread has finished
[2026-02-28 04:44:36] 2026-02-28 03:43:33,048 | INFO     | [job] control thread has finished
[2026-02-28 04:44:36] 2026-02-28 03:43:33,061 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-28 04:44:36] 2026-02-28 03:43:33,107 | INFO     | [job] validate thread has finished
[2026-02-28 04:44:36] 2026-02-28 03:43:33,209 | INFO     | [payload] control thread has finished
[2026-02-28 04:44:36] 2026-02-28 03:43:33,253 | INFO     | [payload] failed_post thread has finished
[2026-02-28 04:44:36] 2026-02-28 03:43:33,410 | INFO     | [payload] validate_post thread has finished
[2026-02-28 04:44:36] 2026-02-28 03:43:33,782 | INFO     | [job] create_data_payload thread has finished
[2026-02-28 04:44:36] 2026-02-28 03:43:33,808 | INFO     | [data] copytool_in thread has finished
[2026-02-28 04:44:36] 2026-02-28 03:43:34,364 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-28 04:44:36] 2026-02-28 03:43:34,460 | INFO     | [data] copytool_out thread has finished
[2026-02-28 04:44:36] 2026-02-28 03:43:35,369 | INFO     | [job] queue monitor thread has finished
[2026-02-28 04:44:36] 2026-02-28 03:43:37,068 | INFO     | [data] queue_monitor thread has finished
[2026-02-28 04:44:36] 2026-02-28 03:43:41,875 | INFO     | job.realtimelogging is not enabled
[2026-02-28 04:44:36] 2026-02-28 03:43:42,875 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-28 04:44:36] 2026-02-28 03:44:02,568 | INFO     | PID=32162 has CPU usage=4.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-02-28 04:44:36] 2026-02-28 03:44:02,569 | INFO     | found 0 job(s) in 20 queues
[2026-02-28 04:44:36] 2026-02-28 03:44:02,569 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-28 04:44:36] 2026-02-28 03:44:02,569 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-28 04:44:36] 2026-02-28 03:44:30,943 | INFO     | [monitor] cgroup control has ended
[2026-02-28 04:44:36] 2026-02-28 03:44:31,130 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139788661270336)>', '<ExcThread(monitor, started 139788225079040)>']
[2026-02-28 04:44:36] 2026-02-28 03:44:31,700 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-28 04:44:36] 2026-02-28 03:44:31,700 | INFO     | [monitor] control thread has ended
[2026-02-28 04:44:36] 2026-02-28 03:44:36,156 | INFO     | all workflow threads have been joined
[2026-02-28 04:44:36] 2026-02-28 03:44:36,157 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-28 04:44:36] 2026-02-28 03:44:36,157 | INFO     | traces error code: 0
[2026-02-28 04:44:36] 2026-02-28 03:44:36,157 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-28 04:44:36] 2026-02-28 03:44:36,304 [wrapper] ==== pilot stdout END ====
[2026-02-28 04:44:36] 2026-02-28 03:44:36,308 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-28 04:44:36] 2026-02-28 03:44:36,312 [wrapper] pilotpid: 32162
[2026-02-28 04:44:36] 2026-02-28 03:44:36,316 [wrapper] Pilot exit status: 0
[2026-02-28 04:44:36] 2026-02-28 03:44:36,336 [wrapper] pandaids: 7031687295
[2026-02-28 04:44:36] 2026-02-28 03:44:36,373 [wrapper] cleanup supervisor_pilot  9294 32163
[2026-02-28 04:44:36] 2026-02-28 03:44:36,377 [wrapper] Test setup, not cleaning
[2026-02-28 04:44:36] 2026-02-28 03:44:36,390 [wrapper] apfmon messages muted
[2026-02-28 04:44:36] 2026-02-28 03:44:36,393 [wrapper] ==== wrapper stdout END ====
[2026-02-28 04:44:36] 2026-02-28 03:44:36,397 [wrapper] ==== wrapper stderr END ====
[2026-02-28 04:44:36]  *** Error codes and diagnostics ***
[2026-02-28 04:44:36]     "exeErrorCode": 0,
[2026-02-28 04:44:36]     "exeErrorDiag": "",
[2026-02-28 04:44:36]     "pilotErrorCode": 0,
[2026-02-28 04:44:36]     "pilotErrorDiag": "",
[2026-02-28 04:44:36]  *** Listing of results directory ***
[2026-02-28 04:44:36] total 510164
[2026-02-28 04:44:36] -rw-r--r--. 1 boinc boinc      5111 Feb 27 17:20 queuedata.json
[2026-02-28 04:44:36] -rw-r--r--. 1 boinc boinc    584627 Feb 27 17:20 pilot3.tar.gz
[2026-02-28 04:44:36] -rwx------. 1 boinc boinc     36322 Feb 27 17:20 runpilot2-wrapper.sh
[2026-02-28 04:44:36] -rw-r--r--. 1 boinc boinc       100 Feb 28 02:23 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-28 04:44:36] -rwxr-xr-x. 1 boinc boinc      7986 Feb 28 02:23 run_atlas
[2026-02-28 04:44:36] -rw-r--r--. 1 boinc boinc       105 Feb 28 02:23 job.xml
[2026-02-28 04:44:36] -rw-r--r--. 1 boinc boinc      6390 Feb 28 02:23 init_data.xml
[2026-02-28 04:44:36] -rw-r--r--. 2 boinc boinc 290872722 Feb 28 02:23 EVNT.48220085._000296.pool.root.1
[2026-02-28 04:44:36] -rw-r--r--. 2 boinc boinc     15845 Feb 28 02:23 start_atlas.sh
[2026-02-28 04:44:36] drwxrwx--x. 2 boinc boinc        68 Feb 28 02:23 shared
[2026-02-28 04:44:36] -rw-r--r--. 2 boinc boinc    597958 Feb 28 02:23 input.tar.gz
[2026-02-28 04:44:36] -rw-r--r--. 1 boinc boinc         0 Feb 28 02:23 boinc_lockfile
[2026-02-28 04:44:36] -rw-r--r--. 1 boinc boinc      2567 Feb 28 02:25 pandaJob.out
[2026-02-28 04:44:36] -rw-------. 1 boinc boinc    998790 Feb 28 02:28 agis_schedconf.cvmfs.json
[2026-02-28 04:44:36] -rw-------. 1 boinc boinc   1513015 Feb 28 02:28 agis_ddmendpoints.agis.ALL.json
[2026-02-28 04:44:36] -rw-------. 1 boinc boinc       415 Feb 28 02:28 workernode_map.json
[2026-02-28 04:44:36] drwx------. 5 boinc boinc      4096 Feb 28 02:28 pilot3
[2026-02-28 04:44:36] -rw-------. 1 boinc boinc 224564706 Feb 28 04:42 HITS.48838416._007277.pool.root.1
[2026-02-28 04:44:36] -rw-r--r--. 1 boinc boinc       529 Feb 28 04:42 boinc_task_state.xml
[2026-02-28 04:44:36] -rw-------. 1 boinc boinc      1013 Feb 28 04:43 memory_monitor_summary.json
[2026-02-28 04:44:36] -rw-------. 1 boinc boinc    388808 Feb 28 04:43 log.48838416._007277.job.log.tgz.1
[2026-02-28 04:44:36] -rw-------. 1 boinc boinc      6314 Feb 28 04:43 heartbeat.json
[2026-02-28 04:44:36] -rw-------. 1 boinc boinc        95 Feb 28 04:44 pilot_heartbeat.json
[2026-02-28 04:44:36] -rw-r--r--. 1 boinc boinc      8192 Feb 28 04:44 boinc_mmap_file
[2026-02-28 04:44:36] -rw-r--r--. 1 boinc boinc        27 Feb 28 04:44 wrapper_checkpoint.txt
[2026-02-28 04:44:36] -rw-------. 1 boinc boinc      5063 Feb 28 04:44 pilotlog.txt
[2026-02-28 04:44:36] -rw-------. 1 boinc boinc   1139537 Feb 28 04:44 log.48838416._007277.job.log.1
[2026-02-28 04:44:36] -rw-------. 1 boinc boinc       357 Feb 28 04:44 output.list
[2026-02-28 04:44:36] -rw-r--r--. 1 boinc boinc       620 Feb 28 04:44 runtime_log
[2026-02-28 04:44:36] -rw-------. 1 boinc boinc   1546240 Feb 28 04:44 result.tar.gz
[2026-02-28 04:44:36] -rw-r--r--. 1 boinc boinc      8815 Feb 28 04:44 runtime_log.err
[2026-02-28 04:44:36] -rw-------. 1 boinc boinc       652 Feb 28 04:44 CMXKDm0kFG9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmSF5KDmNpXY4m.diag
[2026-02-28 04:44:36] -rw-r--r--. 1 boinc boinc     20764 Feb 28 04:44 stderr.txt
[2026-02-28 04:44:36] HITS file was successfully produced:
[2026-02-28 04:44:36] -rw-------. 1 boinc boinc 224564706 Feb 28 04:42 shared/HITS.pool.root.1
[2026-02-28 04:44:36]  *** Contents of shared directory: ***
[2026-02-28 04:44:36] total 505472
[2026-02-28 04:44:36] -rw-r--r--. 2 boinc boinc 290872722 Feb 28 02:23 ATLAS.root_0
[2026-02-28 04:44:36] -rw-r--r--. 2 boinc boinc     15845 Feb 28 02:23 start_atlas.sh
[2026-02-28 04:44:36] -rw-r--r--. 2 boinc boinc    597958 Feb 28 02:23 input.tar.gz
[2026-02-28 04:44:36] -rw-------. 1 boinc boinc 224564706 Feb 28 04:42 HITS.pool.root.1
[2026-02-28 04:44:36] -rw-------. 1 boinc boinc   1546240 Feb 28 04:44 result.tar.gz
04:44:38 (28113): run_atlas exited; CPU time 60958.540037
04:44:38 (28113): called boinc_finish(0)

</stderr_txt>
]]>

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