Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:52:08 (30583): wrapper (7.7.26015): starting
02:52:08 (30583): wrapper: running run_atlas (--nthreads 8)
[2026-02-28 02:52:08] Arguments: --nthreads 8
[2026-02-28 02:52:08] Threads: 8
[2026-02-28 02:52:08] Checking for CVMFS
[2026-02-28 02:52:09] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-28 02:52:34] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-28 02:52:34] Running cvmfs_config stat atlas.cern.ch
[2026-02-28 02:52:34] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-28 02:52:34] 2.11.2.0 18344 106762 99808 156715 0 49 16025582 25165825 0 130560 71 30238520 99.806 29551737 1654 http://s1swinburne-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch http://141.99.253.245:3128/ 1
[2026-02-28 02:52:34] CVMFS is ok
[2026-02-28 02:52:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-28 02:52:34] Checking for apptainer binary...
[2026-02-28 02:52:34] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-28 02:52:34] Running /usr/bin/apptainer --version
[2026-02-28 02:52:34] apptainer version 1.3.2-1.el7
[2026-02-28 02:52:34] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-28 02:52:36] cg-vwn430.simple-grid.lan
[2026-02-28 02:52:36] apptainer works
[2026-02-28 02:52:36] Set ATHENA_PROC_NUMBER=8
[2026-02-28 02:52:36] Set ATHENA_CORE_NUMBER=8
[2026-02-28 02:52:36] Starting ATLAS job with PandaID=7031680360
[2026-02-28 02:52:36] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-28 05:40:06]  *** The last 200 lines of the pilot log: ***
[2026-02-28 05:40:06] 2026-02-28 04:39:09,959 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-28 05:40:06] 2026-02-28 04:39:09,959 | INFO     | log transfer has been attempted: DONE
[2026-02-28 05:40:06] 2026-02-28 04:39:09,959 | INFO     | job 7031680360 has finished - writing final server update
[2026-02-28 05:40:06] 2026-02-28 04:39:09,959 | INFO     | total number of processed events: 400 (read)
[2026-02-28 05:40:06] 2026-02-28 04:39:09,961 | INFO     | using path: /var/lib/boinc/slots/6/PanDA_Pilot-7031680360/memory_monitor_summary.json (trf name=prmon)
[2026-02-28 05:40:06] 2026-02-28 04:39:09,962 | INFO     | extracted standard info from prmon json
[2026-02-28 05:40:06] 2026-02-28 04:39:09,962 | INFO     | extracted standard memory fields from prmon json
[2026-02-28 05:40:06] 2026-02-28 04:39:09,962 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-28 05:40:06] 2026-02-28 04:39:09,962 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-28 05:40:06] 2026-02-28 04:39:09,963 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-28 05:40:06] 2026-02-28 04:39:09,966 | INFO     | fitting pss+swap vs Time
[2026-02-28 05:40:06] 2026-02-28 04:39:09,966 | INFO     | sum of square deviations: 1342841922.0
[2026-02-28 05:40:06] 2026-02-28 04:39:09,968 | INFO     | sum of deviations: 4849323283.000002
[2026-02-28 05:40:06] 2026-02-28 04:39:09,968 | INFO     | mean x: 1772248589.0
[2026-02-28 05:40:06] 2026-02-28 04:39:09,968 | INFO     | mean y: 2530189.073619632
[2026-02-28 05:40:06] 2026-02-28 04:39:09,968 | INFO     | intersect: -6397483248.920313
[2026-02-28 05:40:06] 2026-02-28 04:39:09,969 | INFO     | chi2: 2.3344358795721556
[2026-02-28 05:40:06] 2026-02-28 04:39:09,969 | INFO     | sum of square deviations: 1223016419.5
[2026-02-28 05:40:06] 2026-02-28 04:39:09,970 | INFO     | sum of deviations: 15448917096.000004
[2026-02-28 05:40:06] 2026-02-28 04:39:09,970 | INFO     | mean x: 1772248436.5
[2026-02-28 05:40:06] 2026-02-28 04:39:09,971 | INFO     | mean y: 2543330.8860759493
[2026-02-28 05:40:06] 2026-02-28 04:39:09,971 | INFO     | intersect: -22384170970.29844
[2026-02-28 05:40:06] 2026-02-28 04:39:09,971 | INFO     | chi2: 1.570143338716761
[2026-02-28 05:40:06] 2026-02-28 04:39:09,971 | INFO     | current chi2=1.570143338716761 (change=32.73992434504008 %)
[2026-02-28 05:40:06] 2026-02-28 04:39:09,972 | INFO     | sum of square deviations: 1110539892.0
[2026-02-28 05:40:06] 2026-02-28 04:39:09,973 | INFO     | sum of deviations: 14839800010.0
[2026-02-28 05:40:06] 2026-02-28 04:39:09,973 | INFO     | mean x: 1772248284.0
[2026-02-28 05:40:06] 2026-02-28 04:39:09,973 | INFO     | mean y: 2542504.77124183
[2026-02-28 05:40:06] 2026-02-28 04:39:09,973 | INFO     | intersect: -23679461439.51002
[2026-02-28 05:40:06] 2026-02-28 04:39:09,973 | INFO     | chi2: 1.571803279859239
[2026-02-28 05:40:06] 2026-02-28 04:39:09,974 | INFO     | current chi2=1.571803279859239 (change=-0.10571908319113438 %)
[2026-02-28 05:40:06] 2026-02-28 04:39:09,974 | INFO     | right removable region: 152
[2026-02-28 05:40:06] 2026-02-28 04:39:09,974 | INFO     | sum of square deviations: 1223016419.5
[2026-02-28 05:40:06] 2026-02-28 04:39:09,975 | INFO     | sum of deviations: -20040440135.5
[2026-02-28 05:40:06] 2026-02-28 04:39:09,975 | INFO     | mean x: 1772248741.5
[2026-02-28 05:40:06] 2026-02-28 04:39:09,976 | INFO     | mean y: 2561419.069620253
[2026-02-28 05:40:06] 2026-02-28 04:39:09,976 | INFO     | intersect: 29042764185.73899
[2026-02-28 05:40:06] 2026-02-28 04:39:09,976 | INFO     | chi2: 0.9027652992130503
[2026-02-28 05:40:06] 2026-02-28 04:39:09,976 | INFO     | current chi2=0.9027652992130503 (change=61.32833173475277 %)
[2026-02-28 05:40:06] 2026-02-28 04:39:09,977 | INFO     | sum of square deviations: 1110539892.0
[2026-02-28 05:40:06] 2026-02-28 04:39:09,978 | INFO     | sum of deviations: -20406261192.0
[2026-02-28 05:40:06] 2026-02-28 04:39:09,978 | INFO     | mean x: 1772248894.0
[2026-02-28 05:40:06] 2026-02-28 04:39:09,978 | INFO     | mean y: 2561838.424836601
[2026-02-28 05:40:06] 2026-02-28 04:39:09,978 | INFO     | intersect: 32567779971.261726
[2026-02-28 05:40:06] 2026-02-28 04:39:09,979 | INFO     | chi2: 0.8833462412539286
[2026-02-28 05:40:06] 2026-02-28 04:39:09,979 | INFO     | current chi2=0.8833462412539286 (change=2.151063845281767 %)
[2026-02-28 05:40:06] 2026-02-28 04:39:09,979 | INFO     | left removable region: 20
[2026-02-28 05:40:06] 2026-02-28 04:39:09,979 | INFO     | sum of square deviations: 713140813.0
[2026-02-28 05:40:06] 2026-02-28 04:39:09,980 | INFO     | sum of deviations: 238254044.00000027
[2026-02-28 05:40:06] 2026-02-28 04:39:09,980 | INFO     | mean x: 1772248863.5
[2026-02-28 05:40:06] 2026-02-28 04:39:09,981 | INFO     | mean y: 2560294.909090909
[2026-02-28 05:40:06] 2026-02-28 04:39:09,981 | INFO     | intersect: -589532390.0222362
[2026-02-28 05:40:06] 2026-02-28 04:39:09,981 | INFO     | chi2: 0.024558481608851344
[2026-02-28 05:40:06] 2026-02-28 04:39:09,981 | INFO     | current memory leak: 0.33 B/s (using 132 data points, chi2=0.02)
[2026-02-28 05:40:06] 2026-02-28 04:39:09,982 | INFO     | could have reported an average CPU frequency of 1999 MHz (9 samples)
[2026-02-28 05:40:06] 2026-02-28 04:39:09,982 | INFO     | ..............................
[2026-02-28 05:40:06] 2026-02-28 04:39:09,982 | INFO     | . Timing measurements:
[2026-02-28 05:40:06] 2026-02-28 04:39:09,982 | INFO     | . get job = 0 s
[2026-02-28 05:40:06] 2026-02-28 04:39:09,982 | INFO     | . initial setup = 6 s
[2026-02-28 05:40:06] 2026-02-28 04:39:09,982 | INFO     | . payload setup = 6 s
[2026-02-28 05:40:06] 2026-02-28 04:39:09,983 | INFO     | . stage-in = 0 s
[2026-02-28 05:40:06] 2026-02-28 04:39:09,983 | INFO     | . payload execution = 9898 s
[2026-02-28 05:40:06] 2026-02-28 04:39:09,983 | INFO     | . stage-out = 1 s
[2026-02-28 05:40:06] 2026-02-28 04:39:09,983 | INFO     | . log creation = 0 s
[2026-02-28 05:40:06] 2026-02-28 04:39:09,983 | INFO     | ..............................
[2026-02-28 05:40:06] 2026-02-28 04:39:10,249 | INFO     | 
[2026-02-28 05:40:06] 2026-02-28 04:39:10,249 | INFO     | job summary report
[2026-02-28 05:40:06] 2026-02-28 04:39:10,249 | INFO     | --------------------------------------------------
[2026-02-28 05:40:06] 2026-02-28 04:39:10,249 | INFO     | PanDA job id: 7031680360
[2026-02-28 05:40:06] 2026-02-28 04:39:10,250 | INFO     | task id: 48841707
[2026-02-28 05:40:06] 2026-02-28 04:39:10,250 | INFO     | errors: (none)
[2026-02-28 05:40:06] 2026-02-28 04:39:10,250 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-28 05:40:06] 2026-02-28 04:39:10,250 | INFO     | pilot state: finished 
[2026-02-28 05:40:06] 2026-02-28 04:39:10,250 | INFO     | transexitcode: 0
[2026-02-28 05:40:06] 2026-02-28 04:39:10,250 | INFO     | exeerrorcode: 0
[2026-02-28 05:40:06] 2026-02-28 04:39:10,250 | INFO     | exeerrordiag: 
[2026-02-28 05:40:06] 2026-02-28 04:39:10,250 | INFO     | exitcode: 0
[2026-02-28 05:40:06] 2026-02-28 04:39:10,250 | INFO     | exitmsg: OK
[2026-02-28 05:40:06] 2026-02-28 04:39:10,250 | INFO     | cpuconsumptiontime: 74577 s
[2026-02-28 05:40:06] 2026-02-28 04:39:10,251 | INFO     | nevents: 400
[2026-02-28 05:40:06] 2026-02-28 04:39:10,251 | INFO     | neventsw: 0
[2026-02-28 05:40:06] 2026-02-28 04:39:10,251 | INFO     | pid: 6650
[2026-02-28 05:40:06] 2026-02-28 04:39:10,251 | INFO     | pgrp: 6650
[2026-02-28 05:40:06] 2026-02-28 04:39:10,251 | INFO     | corecount: 8
[2026-02-28 05:40:06] 2026-02-28 04:39:10,251 | INFO     | event service: False
[2026-02-28 05:40:06] 2026-02-28 04:39:10,251 | INFO     | sizes: {0: 2281686, 1: 2282147, 12: 2282147, 9908: 2310673, 9910: 2319671, 9911: 2319727, 9913: 2320113}
[2026-02-28 05:40:06] 2026-02-28 04:39:10,251 | INFO     | --------------------------------------------------
[2026-02-28 05:40:06] 2026-02-28 04:39:10,251 | INFO     | 
[2026-02-28 05:40:06] 2026-02-28 04:39:10,252 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2026-02-28 05:40:06] 2026-02-28 04:39:10,279 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-28 05:40:06] 2026-02-28 04:39:10,280 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-28 05:40:06] 2026-02-28 04:39:10,280 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-28 05:40:06] 2026-02-28 04:39:10,280 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-28 05:40:06] 2026-02-28 04:39:10,280 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-28 05:40:06] 2026-02-28 04:39:10,280 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-28 05:40:06] 2026-02-28 04:39:10,280 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-28 05:40:06] 2026-02-28 04:39:10,280 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-28 05:40:06] 2026-02-28 04:39:10,280 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-28 05:40:06] 2026-02-28 04:39:10,280 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-28 05:40:06] 2026-02-28 04:39:10,281 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-28 05:40:06] 2026-02-28 04:39:10,281 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-28 05:40:06] 2026-02-28 04:39:10,281 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-28 05:40:06] 2026-02-28 04:39:10,281 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-28 05:40:06] 2026-02-28 04:39:10,281 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-28 05:40:06] 2026-02-28 04:39:10,281 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-28 05:40:06] 2026-02-28 04:39:10,281 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-28 05:40:06] 2026-02-28 04:39:10,281 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-28 05:40:06] 2026-02-28 04:39:10,281 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-28 05:40:06] 2026-02-28 04:39:10,281 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-28 05:40:06] 2026-02-28 04:39:10,282 | INFO     | job 7031680360 has completed (purged errors)
[2026-02-28 05:40:06] 2026-02-28 04:39:10,282 | INFO     | overall cleanup function is called
[2026-02-28 05:40:06] 2026-02-28 04:39:11,290 | INFO     | --- collectZombieJob: --- 10, [6650]
[2026-02-28 05:40:06] 2026-02-28 04:39:11,290 | INFO     | zombie collector waiting for pid 6650
[2026-02-28 05:40:06] 2026-02-28 04:39:11,290 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-28 05:40:06] 2026-02-28 04:39:11,290 | INFO     | collected zombie processes
[2026-02-28 05:40:06] 2026-02-28 04:39:11,291 | INFO     | will attempt to kill all subprocesses of pid=6650
[2026-02-28 05:40:06] 2026-02-28 04:39:11,351 | INFO     | process IDs to be killed: [6650] (in reverse order)
[2026-02-28 05:40:06] 2026-02-28 04:39:11,409 | WARNING  | found no corresponding commands to process id(s)
[2026-02-28 05:40:06] 2026-02-28 04:39:11,409 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-28 05:40:06] 2026-02-28 04:39:11,411 | INFO     | did not find any defunct processes belonging to 6650
[2026-02-28 05:40:06] 2026-02-28 04:39:11,413 | INFO     | did not find any defunct processes belonging to 6650
[2026-02-28 05:40:06] 2026-02-28 04:39:11,413 | INFO     | ready for new job
[2026-02-28 05:40:06] 2026-02-28 04:39:11,413 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-28 05:40:06] 2026-02-28 04:39:11,415 | INFO     | **************************************
[2026-02-28 05:40:06] 2026-02-28 04:39:11,416 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-28 05:40:06] 2026-02-28 04:39:11,416 | INFO     | **************************************
[2026-02-28 05:40:06] 2026-02-28 04:39:11,416 | INFO     | 
[2026-02-28 05:40:06] 2026-02-28 04:39:11,416 | INFO     | pilot is running in a VM
[2026-02-28 05:40:06] 2026-02-28 04:39:11,416 | INFO     | architecture information:
[2026-02-28 05:40:06] 2026-02-28 04:39:11,417 | INFO     | executing command: cat /etc/os-release
[2026-02-28 05:40:06] 2026-02-28 04:39:11,435 | INFO     | cat /etc/os-release:
[2026-02-28 05:40:06] NAME="CentOS Linux"
[2026-02-28 05:40:06] VERSION="7 (Core)"
[2026-02-28 05:40:06] ID="centos"
[2026-02-28 05:40:06] ID_LIKE="rhel fedora"
[2026-02-28 05:40:06] VERSION_ID="7"
[2026-02-28 05:40:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-28 05:40:06] ANSI_COLOR="0;31"
[2026-02-28 05:40:06] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-28 05:40:06] HOME_URL="https://www.centos.org/"
[2026-02-28 05:40:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-28 05:40:06] 
[2026-02-28 05:40:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-28 05:40:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-28 05:40:06] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-28 05:40:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-28 05:40:06] 
[2026-02-28 05:40:06] 2026-02-28 04:39:11,436 | INFO     | **************************************
[2026-02-28 05:40:06] 2026-02-28 04:39:11,939 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2026-02-28 05:40:06] 2026-02-28 04:39:11,961 | INFO     | sufficient remaining disk space (497589157888 B)
[2026-02-28 05:40:06] 2026-02-28 04:39:11,961 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-28 05:40:06] 2026-02-28 04:39:11,961 | INFO     | current server update state: UPDATING_FINAL
[2026-02-28 05:40:06] 2026-02-28 04:39:11,962 | INFO     | update_server=False
[2026-02-28 05:40:06] 2026-02-28 04:39:11,962 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-28 05:40:06] 2026-02-28 04:39:11,962 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-28 05:40:06] 2026-02-28 04:39:11,963 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-28 05:40:06] 2026-02-28 04:39:12,609 | INFO     | all job control threads have been joined
[2026-02-28 05:40:06] 2026-02-28 04:39:12,749 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-28 05:40:06] 2026-02-28 04:39:12,749 | INFO     | aborting loop
[2026-02-28 05:40:06] 2026-02-28 04:39:12,798 | INFO     | all data control threads have been joined
[2026-02-28 05:40:06] 2026-02-28 04:39:12,798 | INFO     | all payload control threads have been joined
[2026-02-28 05:40:06] 2026-02-28 04:39:12,967 | INFO     | [job] retrieve thread has finished
[2026-02-28 05:40:06] 2026-02-28 04:39:12,969 | INFO     | [job] queue monitor thread has finished
[2026-02-28 05:40:06] 2026-02-28 04:39:13,076 | INFO     | [job] validate thread has finished
[2026-02-28 05:40:06] 2026-02-28 04:39:13,170 | INFO     | [payload] failed_post thread has finished
[2026-02-28 05:40:06] 2026-02-28 04:39:13,203 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-28 05:40:06] 2026-02-28 04:39:13,516 | INFO     | [payload] validate_post thread has finished
[2026-02-28 05:40:06] 2026-02-28 04:39:13,614 | INFO     | [job] control thread has finished
[2026-02-28 05:40:06] 2026-02-28 04:39:13,652 | INFO     | [data] copytool_in thread has finished
[2026-02-28 05:40:06] 2026-02-28 04:39:13,755 | INFO     | [job] job monitor thread has finished
[2026-02-28 05:40:06] 2026-02-28 04:39:13,799 | INFO     | [data] control thread has finished
[2026-02-28 05:40:06] 2026-02-28 04:39:13,804 | INFO     | [payload] control thread has finished
[2026-02-28 05:40:06] 2026-02-28 04:39:13,969 | INFO     | [data] copytool_out thread has finished
[2026-02-28 05:40:06] 2026-02-28 04:39:14,110 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-28 05:40:06] 2026-02-28 04:39:14,315 | INFO     | [payload] validate_pre thread has finished
[2026-02-28 05:40:06] 2026-02-28 04:39:14,393 | INFO     | [payload] execute_payloads thread has finished
[2026-02-28 05:40:06] 2026-02-28 04:39:14,442 | INFO     | [job] create_data_payload thread has finished
[2026-02-28 05:40:06] 2026-02-28 04:39:18,117 | INFO     | [data] queue_monitor thread has finished
[2026-02-28 05:40:06] 2026-02-28 04:39:42,263 | INFO     | PID=2242 has CPU usage=4.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-02-28 05:40:06] 2026-02-28 04:39:42,264 | INFO     | found 0 job(s) in 20 queues
[2026-02-28 05:40:06] 2026-02-28 04:39:42,264 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-28 05:40:06] 2026-02-28 04:39:42,264 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-28 05:40:06] 2026-02-28 04:40:00,429 | INFO     | [monitor] cgroup control has ended
[2026-02-28 05:40:06] 2026-02-28 04:40:01,195 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140652182898496)>', '<ExcThread(monitor, started 140651874195200)>']
[2026-02-28 05:40:06] 2026-02-28 04:40:01,361 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-28 05:40:06] 2026-02-28 04:40:01,361 | INFO     | [monitor] control thread has ended
[2026-02-28 05:40:06] 2026-02-28 04:40:06,201 | INFO     | all workflow threads have been joined
[2026-02-28 05:40:06] 2026-02-28 04:40:06,201 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-28 05:40:06] 2026-02-28 04:40:06,201 | INFO     | traces error code: 0
[2026-02-28 05:40:06] 2026-02-28 04:40:06,201 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-28 05:40:06] 2026-02-28 04:40:06,340 [wrapper] ==== pilot stdout END ====
[2026-02-28 05:40:06] 2026-02-28 04:40:06,349 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-28 05:40:06] 2026-02-28 04:40:06,355 [wrapper] pilotpid: 2242
[2026-02-28 05:40:06] 2026-02-28 04:40:06,360 [wrapper] Pilot exit status: 0
[2026-02-28 05:40:06] 2026-02-28 04:40:06,390 [wrapper] pandaids: 7031680360
[2026-02-28 05:40:06] 2026-02-28 04:40:06,429 [wrapper] cleanup supervisor_pilot 11832 2243
[2026-02-28 05:40:06] 2026-02-28 04:40:06,434 [wrapper] Test setup, not cleaning
[2026-02-28 05:40:06] 2026-02-28 04:40:06,446 [wrapper] apfmon messages muted
[2026-02-28 05:40:06] 2026-02-28 04:40:06,449 [wrapper] ==== wrapper stdout END ====
[2026-02-28 05:40:06] 2026-02-28 04:40:06,453 [wrapper] ==== wrapper stderr END ====
[2026-02-28 05:40:06]  *** Error codes and diagnostics ***
[2026-02-28 05:40:06]     "exeErrorCode": 0,
[2026-02-28 05:40:06]     "exeErrorDiag": "",
[2026-02-28 05:40:06]     "pilotErrorCode": 0,
[2026-02-28 05:40:06]     "pilotErrorDiag": "",
[2026-02-28 05:40:06]  *** Listing of results directory ***
[2026-02-28 05:40:06] total 579204
[2026-02-28 05:40:06] -rwx------. 1 boinc boinc     36322 Feb 27 15:42 runpilot2-wrapper.sh
[2026-02-28 05:40:06] -rw-r--r--. 1 boinc boinc    584627 Feb 27 15:44 pilot3.tar.gz
[2026-02-28 05:40:06] -rw-r--r--. 1 boinc boinc      5111 Feb 27 15:44 queuedata.json
[2026-02-28 05:40:06] -rw-r--r--. 1 boinc boinc       100 Feb 28 02:52 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-28 05:40:06] -rwxr-xr-x. 1 boinc boinc      7986 Feb 28 02:52 run_atlas
[2026-02-28 05:40:06] -rw-r--r--. 1 boinc boinc       105 Feb 28 02:52 job.xml
[2026-02-28 05:40:06] -rw-r--r--. 2 boinc boinc 316139796 Feb 28 02:52 EVNT.48252644._000036.pool.root.1
[2026-02-28 05:40:06] -rw-r--r--. 2 boinc boinc    597953 Feb 28 02:52 input.tar.gz
[2026-02-28 05:40:06] -rw-r--r--. 1 boinc boinc      6390 Feb 28 02:52 init_data.xml
[2026-02-28 05:40:06] -rw-r--r--. 2 boinc boinc     15845 Feb 28 02:52 start_atlas.sh
[2026-02-28 05:40:06] drwxrwx--x. 2 boinc boinc        68 Feb 28 02:52 shared
[2026-02-28 05:40:06] -rw-r--r--. 1 boinc boinc         0 Feb 28 02:52 boinc_lockfile
[2026-02-28 05:40:06] -rw-r--r--. 1 boinc boinc      2490 Feb 28 02:52 pandaJob.out
[2026-02-28 05:40:06] -rw-------. 1 boinc boinc    998790 Feb 28 02:53 agis_schedconf.cvmfs.json
[2026-02-28 05:40:06] -rw-------. 1 boinc boinc   1513015 Feb 28 02:53 agis_ddmendpoints.agis.ALL.json
[2026-02-28 05:40:06] -rw-------. 1 boinc boinc       415 Feb 28 02:53 workernode_map.json
[2026-02-28 05:40:06] drwx------. 5 boinc boinc      4096 Feb 28 02:53 pilot3
[2026-02-28 05:40:06] -rw-------. 1 boinc boinc 269516952 Feb 28 05:38 HITS.48841707._000882.pool.root.1
[2026-02-28 05:40:06] -rw-r--r--. 1 boinc boinc       529 Feb 28 05:38 boinc_task_state.xml
[2026-02-28 05:40:06] -rw-------. 1 boinc boinc      1012 Feb 28 05:39 memory_monitor_summary.json
[2026-02-28 05:40:06] -rw-------. 1 boinc boinc    386747 Feb 28 05:39 log.48841707._000882.job.log.tgz.1
[2026-02-28 05:40:06] -rw-------. 1 boinc boinc      6294 Feb 28 05:39 heartbeat.json
[2026-02-28 05:40:06] -rw-------. 1 boinc boinc        95 Feb 28 05:39 pilot_heartbeat.json
[2026-02-28 05:40:06] -rw-r--r--. 1 boinc boinc      8192 Feb 28 05:39 boinc_mmap_file
[2026-02-28 05:40:06] -rw-r--r--. 1 boinc boinc        28 Feb 28 05:39 wrapper_checkpoint.txt
[2026-02-28 05:40:06] -rw-------. 1 boinc boinc      4804 Feb 28 05:40 pilotlog.txt
[2026-02-28 05:40:06] -rw-------. 1 boinc boinc   1382361 Feb 28 05:40 log.48841707._000882.job.log.1
[2026-02-28 05:40:06] -rw-------. 1 boinc boinc       357 Feb 28 05:40 output.list
[2026-02-28 05:40:06] -rw-r--r--. 1 boinc boinc       620 Feb 28 05:40 runtime_log
[2026-02-28 05:40:06] -rw-------. 1 boinc boinc   1781760 Feb 28 05:40 result.tar.gz
[2026-02-28 05:40:06] -rw-------. 1 boinc boinc       654 Feb 28 05:40 xVNMDmvDEG9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmXD5KDmqybNBn.diag
[2026-02-28 05:40:06] -rw-r--r--. 1 boinc boinc      8816 Feb 28 05:40 runtime_log.err
[2026-02-28 05:40:06] -rw-r--r--. 1 boinc boinc     20716 Feb 28 05:40 stderr.txt
[2026-02-28 05:40:06] HITS file was successfully produced:
[2026-02-28 05:40:06] -rw-------. 1 boinc boinc 269516952 Feb 28 05:38 shared/HITS.pool.root.1
[2026-02-28 05:40:06]  *** Contents of shared directory: ***
[2026-02-28 05:40:06] total 574276
[2026-02-28 05:40:06] -rw-r--r--. 2 boinc boinc 316139796 Feb 28 02:52 ATLAS.root_0
[2026-02-28 05:40:06] -rw-r--r--. 2 boinc boinc    597953 Feb 28 02:52 input.tar.gz
[2026-02-28 05:40:06] -rw-r--r--. 2 boinc boinc     15845 Feb 28 02:52 start_atlas.sh
[2026-02-28 05:40:06] -rw-------. 1 boinc boinc 269516952 Feb 28 05:38 HITS.pool.root.1
[2026-02-28 05:40:06] -rw-------. 1 boinc boinc   1781760 Feb 28 05:40 result.tar.gz
05:40:07 (30583): run_atlas exited; CPU time 74634.611533
05:40:07 (30583): called boinc_finish(0)

</stderr_txt>
]]>

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