Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
2026-02-27 20:07:05 (43965): vboxwrapper version 26210
2026-02-27 20:07:05 (43965): BOINC client version: 8.2.8
2026-02-27 20:07:05 (43965): Detected: VirtualBox VboxManage Interface (Version: 7.2.6)
2026-02-27 20:07:05 (43965): Successfully copied 'init_data.xml' to the shared directory.
2026-02-27 20:07:05 (43965): Create VM. (boinc_77d9031f4a56ff6c, slot#7)
2026-02-27 20:07:06 (43965): Setting Memory Size for VM. (4100MB)
2026-02-27 20:07:06 (43965): Setting CPU Count for VM. (1)
2026-02-27 20:07:06 (43965): Setting Chipset Options for VM.
2026-02-27 20:07:06 (43965): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-02-27 20:07:06 (43965): Setting Boot Options for VM.
2026-02-27 20:07:06 (43965): Setting Network Configuration for NAT. (Driver: virtio)
2026-02-27 20:07:06 (43965): Enabling VM Network Access.
2026-02-27 20:07:06 (43965): Disabling USB Support for VM.
2026-02-27 20:07:06 (43965): Disabling COM Port Support for VM.
2026-02-27 20:07:06 (43965): Disabling LPT Port Support for VM.
2026-02-27 20:07:06 (43965): Disabling Audio Support for VM.
2026-02-27 20:07:07 (43965): Disabling Clipboard Support for VM.
2026-02-27 20:07:07 (43965): Disabling Drag and Drop Support for VM.
2026-02-27 20:07:07 (43965): Adding storage controller(s) to VM.
2026-02-27 20:07:07 (43965): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-02-27 20:07:07 (43965): Adding VirtualBox Guest Additions to VM.
2026-02-27 20:07:08 (43965): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-02-27 20:07:08 (43965): forwarding host port 34295 to guest port 80
2026-02-27 20:07:08 (43965): Enabling remote desktop for VM.
2026-02-27 20:07:08 (43965): Required extension pack not installed, remote desktop not enabled.
2026-02-27 20:07:08 (43965): Enabling shared directory for VM.
2026-02-27 20:07:08 (43965): Starting VM using VBoxManage interface. (boinc_77d9031f4a56ff6c, slot#7)
2026-02-27 20:07:09 (43965): Successfully started VM. (PID = '44596')
2026-02-27 20:07:09 (43965): Reporting VM Process ID to BOINC.
2026-02-27 20:07:09 (43965): Guest Log: BIOS: VirtualBox 7.2.6
2026-02-27 20:07:09 (43965): Guest Log: CPUID EDX: 0x178bfbff
2026-02-27 20:07:09 (43965): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-02-27 20:07:09 (43965): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-02-27 20:07:09 (43965): VM state change detected. (old = 'poweredoff', new = 'running')
2026-02-27 20:07:09 (43965): Detected: Web Application Enabled (http://localhost:34295)
2026-02-27 20:07:09 (43965): Preference change detected
2026-02-27 20:07:09 (43965): Setting CPU throttle for VM. (100%)
2026-02-27 20:07:09 (43965): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-02-27 20:07:11 (43965): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-02-27 20:07:11 (43965): Guest Log: BIOS: Booting from Hard Disk...
2026-02-27 20:07:14 (43965): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-02-27 20:07:14 (43965): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-02-27 20:07:14 (43965): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-02-27 20:07:14 (43965): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-02-27 20:07:14 (43965): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-02-27 20:07:14 (43965): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-02-27 20:07:14 (43965): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-02-27 20:07:14 (43965): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-02-27 20:07:14 (43965): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-02-27 20:07:14 (43965): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-02-27 20:07:14 (43965): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-02-27 20:07:14 (43965): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-02-27 20:07:14 (43965): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-02-27 20:07:14 (43965): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-02-27 20:07:14 (43965): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-02-27 20:07:14 (43965): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-02-27 20:07:14 (43965): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-02-27 20:07:14 (43965): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-02-27 20:07:14 (43965): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-02-27 20:07:14 (43965): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-02-27 20:07:14 (43965): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-02-27 20:07:14 (43965): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-02-27 20:07:14 (43965): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-02-27 20:07:14 (43965): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-02-27 20:07:14 (43965): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-02-27 20:07:14 (43965): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-02-27 20:07:14 (43965): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-02-27 20:07:14 (43965): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-02-27 20:07:14 (43965): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-02-27 20:07:14 (43965): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-02-27 20:07:14 (43965): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-02-27 20:07:14 (43965): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-02-27 20:07:18 (43965): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-02-27 20:07:18 (43965): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-02-27 20:07:27 (43965): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-02-27 20:07:27 (43965): Guest Log: 00:00:00.000170 main     Log opened 2026-02-27T20:07:25.771077000Z
2026-02-27 20:07:27 (43965): Guest Log: 00:00:00.000301 main     OS Product: Linux
2026-02-27 20:07:27 (43965): Guest Log: 00:00:00.000339 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-02-27 20:07:27 (43965): Guest Log: 00:00:00.000366 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-02-27 20:07:27 (43965): Guest Log: 00:00:00.000391 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-02-27 20:07:27 (43965): Guest Log: 00:00:00.000392 main     Process ID: 1250
2026-02-27 20:07:27 (43965): Guest Log: 00:00:00.000393 main     Package type: LINUX_64BITS_GENERIC
2026-02-27 20:07:27 (43965): Guest Log: 00:00:00.006468 main     5.2.32 r132073 started. Verbose level = 0
2026-02-27 20:07:27 (43965): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-02-27 20:07:27 (43965): Guest Log: [INFO] Mounting shared directory
2026-02-27 20:07:27 (43965): Guest Log: [INFO] Checking for init_data.xml
2026-02-27 20:07:32 (43965): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-02-27 20:07:32 (43965): Guest Log: [INFO] Detected branch: prod
2026-02-27 20:07:32 (43965): Guest Log: This is the prod version of the ATLAS job wrapper
2026-02-27 20:07:32 (43965): Guest Log: Copying input files
2026-02-27 20:07:33 (43965): Guest Log: Copied input files into RunAtlas.
2026-02-27 20:07:33 (43965): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-02-27 20:07:33 (43965): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-02-27 20:07:33 (43965): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-02-27 20:07:33 (43965): Guest Log: Further information can be found at the LHC@home message board.
2026-02-27 20:07:43 (43965): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-02-27 20:07:43 (43965): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-02-27 20:07:43 (43965): Guest Log: 2.6.3.0 1519 0 30080 156706 4 1 3117743 4096001 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2026-02-27 20:07:44 (43965): Guest Log: copied the webapp to /var/www
2026-02-27 20:07:44 (43965): Guest Log: core_number=1
2026-02-27 20:07:45 (43965): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-02-27 20:07:45 (43965): Guest Log:  *** Starting ATLAS job. (PandaID=7031579222 taskID=48842989) ***
2026-02-27 20:30:06 (43965): Guest Log:  *** Job finished ***
2026-02-27 20:30:06 (43965): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-02-27 20:30:06 (43965): Guest Log: 2026-02-27 20:29:52,079 | INFO     | waiting for thread to finish: ['<_MainThread(MainThread, started 140345589393216)>', '<ExcThread(queue_monitor, started 140345136363264)>']
2026-02-27 20:30:06 (43965): Guest Log: 2026-02-27 20:29:54,083 | INFO     | waiting for thread to finish: ['<_MainThread(MainThread, started 140345589393216)>', '<ExcThread(queue_monitor, started 140345136363264)>']
2026-02-27 20:30:06 (43965): Guest Log: 2026-02-27 20:29:56,085 | INFO     | waiting for thread to finish: ['<_MainThread(MainThread, started 140345589393216)>', '<ExcThread(queue_monitor, started 140345136363264)>']
2026-02-27 20:30:06 (43965): Guest Log: 2026-02-27 20:29:58,088 | INFO     | waiting for thread to finish: ['<_MainThread(MainThread, started 140345589393216)>', '<ExcThread(queue_monitor, started 140345136363264)>']
2026-02-27 20:30:06 (43965): Guest Log: 2026-02-27 20:30:00,091 | INFO     | waiting for thread to finish: ['<_MainThread(MainThread, started 140345589393216)>', '<ExcThread(queue_monitor, started 140345136363264)>']
2026-02-27 20:30:06 (43965): Guest Log: 2026-02-27 20:30:02,093 | INFO     | waiting for thread to finish: ['<_MainThread(MainThread, started 140345589393216)>', '<ExcThread(queue_monitor, started 140345136363264)>']
2026-02-27 20:30:06 (43965): Guest Log: 2026-02-27 20:30:02,958 [wrapper] The pilot process (5866) is still running after 3m. Sending SIGKILL (9).
2026-02-27 20:30:06 (43965): Guest Log: 2026-02-27 20:30:02,965 [wrapper] The pilot process (5866) is still running after 3m. Sending SIGKILL (9).
2026-02-27 20:30:06 (43965): Guest Log: 2026-02-27 20:30:02,990 [wrapper] ==== pilot stdout END ====
2026-02-27 20:30:06 (43965): Guest Log: 2026-02-27 20:30:03,000 [wrapper] ==== wrapper stdout RESUME ====
2026-02-27 20:30:06 (43965): Guest Log: 2026-02-27 20:30:03,006 [wrapper] pilotpid: 5866
2026-02-27 20:30:06 (43965): Guest Log: 2026-02-27 20:30:03,010 [wrapper] Pilot exit status: 137
2026-02-27 20:30:06 (43965): Guest Log: ./runpilot2-wrapper.sh: line 1019: /usr/bin/xargs: Input/output error
2026-02-27 20:30:06 (43965): Guest Log: 2026-02-27 20:30:04,803 [wrapper] pandaids: 
2026-02-27 20:30:06 (43965): Guest Log: 2026-02-27 20:30:04,807 [wrapper] Found: wrapper_sigkill_5866, so killed by wrapper
2026-02-27 20:30:06 (43965): Guest Log: 2026-02-27 20:30:04,861 [wrapper] No supervise_pilot CHILD process found
2026-02-27 20:30:06 (43965): Guest Log: 2026-02-27 20:30:04,865 [wrapper] Test setup, not cleaning
2026-02-27 20:30:06 (43965): Guest Log: 2026-02-27 20:30:04,869 [wrapper] apfmon messages muted
2026-02-27 20:30:06 (43965): Guest Log: 2026-02-27 20:30:04,873 [wrapper] ==== wrapper stdout END ====
2026-02-27 20:30:06 (43965): Guest Log: 2026-02-27 20:30:04,877 [wrapper] ==== wrapper stderr END ====
2026-02-27 20:30:06 (43965): Guest Log:  *** Error codes and diagnostics ***
2026-02-27 20:30:06 (43965): Guest Log:  *** Listing of results directory ***
2026-02-27 20:30:06 (43965): Guest Log: total 4308
2026-02-27 20:30:06 (43965): Guest Log: -rw-r--r--. 1 atlas atlas  584627 Feb 27 14:37 pilot3.tar.gz
2026-02-27 20:30:06 (43965): Guest Log: -rwx------. 1 atlas atlas   36322 Feb 27 14:39 runpilot2-wrapper.sh
2026-02-27 20:30:06 (43965): Guest Log: -rw-r--r--. 1 atlas atlas    5111 Feb 27 14:40 queuedata.json
2026-02-27 20:30:06 (43965): Guest Log: -rw-r--r--. 1 atlas atlas   15845 Feb 27 20:07 start_atlas.sh
2026-02-27 20:30:06 (43965): Guest Log: -rw-r--r--. 1 atlas atlas    9195 Feb 27 20:07 init_data.xml
2026-02-27 20:30:06 (43965): Guest Log: -rw-r--r--. 1 atlas atlas  597991 Feb 27 20:07 input.tar.gz
2026-02-27 20:30:06 (43965): Guest Log: lrwxrwxrwx. 1 atlas atlas      20 Feb 27 20:07 EVNT.48449865._000002.pool.root.1 -> /data/./ATLAS.root_0
2026-02-27 20:30:06 (43965): Guest Log: -rw-r--r--. 1 atlas atlas    2630 Feb 27 20:07 pandaJob.out
2026-02-27 20:30:06 (43965): Guest Log: -rw-------. 1 atlas atlas  998790 Feb 27 20:08 agis_schedconf.cvmfs.json
2026-02-27 20:30:06 (43965): Guest Log: -rw-------. 1 atlas atlas 1513015 Feb 27 20:08 agis_ddmendpoints.agis.ALL.json
2026-02-27 20:30:06 (43965): Guest Log: -rw-------. 1 atlas atlas     423 Feb 27 20:08 workernode_map.json
2026-02-27 20:30:06 (43965): Guest Log: drwx------. 5 atlas atlas    4096 Feb 27 20:08 pilot3
2026-02-27 20:30:06 (43965): Guest Log: -rw-------. 1 atlas atlas     583 Feb 27 20:09 heartbeat.json
2026-02-27 20:30:06 (43965): Guest Log: -rw-------. 1 atlas atlas      95 Feb 27 20:26 pilot_heartbeat.json
2026-02-27 20:30:06 (43965): Guest Log: -rw-------. 1 atlas atlas       0 Feb 27 20:27 wrapper_sigint_5866
2026-02-27 20:30:06 (43965): Guest Log: drwxrwx---. 2 atlas atlas    4096 Feb 27 20:27 PanDA_Pilot-7031579222
2026-02-27 20:30:06 (43965): Guest Log: -rw-------. 1 atlas atlas    1018 Feb 27 20:27 memory_monitor_summary.json
2026-02-27 20:30:06 (43965): Guest Log: -rw-------. 1 atlas atlas  184971 Feb 27 20:30 pilotlog.txt
2026-02-27 20:30:06 (43965): Guest Log: -rw-------. 1 atlas atlas       0 Feb 27 20:30 wrapper_sigkill_5866
2026-02-27 20:30:06 (43965): Guest Log: -rw-------. 1 atlas atlas  197231 Feb 27 20:30 log.48842989._000038.job.log.1
2026-02-27 20:30:06 (43965): Guest Log: -rw-r--r--. 1 atlas atlas     571 Feb 27 20:30 runtime_log
2026-02-27 20:30:06 (43965): Guest Log: -rw-------. 1 atlas atlas  204800 Feb 27 20:30 result.tar.gz
2026-02-27 20:30:06 (43965): Guest Log: -rw-r--r--. 1 atlas atlas    7963 Feb 27 20:30 runtime_log.err
2026-02-27 20:30:06 (43965): Guest Log: -rw-------. 1 atlas atlas     644 Feb 27 20:30 eWONDmQBEG9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmH64KDmVVxpOm.diag
2026-02-27 20:30:06 (43965): Guest Log: Looking for outputfile HITS.48842989._000038.pool.root.1
2026-02-27 20:30:06 (43965): Guest Log: No HITS file was produced
2026-02-27 20:30:06 (43965): Guest Log: Successfully finished the ATLAS job!
2026-02-27 20:30:06 (43965): Guest Log: Copying the results back to the shared directory!
2026-02-27 20:30:06 (43965): Guest Log:  *** Contents of shared directory: ***
2026-02-27 20:30:06 (43965): Guest Log: total 271740
2026-02-27 20:30:06 (43965): Guest Log: -rw-r--r--. 1 root root 277423259 Feb 27 20:07 ATLAS.root_0
2026-02-27 20:30:06 (43965): Guest Log: -rw-r--r--. 1 root root      9195 Feb 27 20:07 init_data.xml
2026-02-27 20:30:06 (43965): Guest Log: -rw-r--r--. 1 root root    597991 Feb 27 20:07 input.tar.gz
2026-02-27 20:30:06 (43965): Guest Log: -rw-r--r--. 1 root root    204800 Feb 27  2026 result.tar.gz
2026-02-27 20:30:06 (43965): Guest Log: -rw-r--r--. 1 root root     15845 Feb 27 20:07 start_atlas.sh
2026-02-27 20:30:06 (43965): Guest Log:  *** Success! Shutting down the machine. ***
2026-02-27 20:30:06 (43965): VM Completion File Detected.
2026-02-27 20:30:06 (43965): Powering off VM.
2026-02-27 20:30:06 (43965): Successfully stopped VM.
2026-02-27 20:30:06 (43965): Deregistering VM. (boinc_77d9031f4a56ff6c, slot#7)
2026-02-27 20:30:06 (43965): Removing network bandwidth throttle group from VM.
2026-02-27 20:30:06 (43965): Removing VM from VirtualBox.
2026-02-27 20:30:11 (43965): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN