Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:01:03 (12909): wrapper (7.7.26015): starting
05:01:03 (12909): wrapper: running run_atlas (--nthreads 8)
[2026-02-28 05:01:03] Arguments: --nthreads 8
[2026-02-28 05:01:03] Threads: 8
[2026-02-28 05:01:03] Checking for CVMFS
[2026-02-28 05:01:03] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-28 05:01:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-28 05:01:19] Running cvmfs_config stat atlas.cern.ch
[2026-02-28 05:01:19] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-28 05:01:19] 2.11.2.0 15174 106890 127948 156718 2 50 15924391 25165825 0 130560 85 34549912 99.831 23602252 1347 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://141.99.253.245:3128/ 1
[2026-02-28 05:01:19] CVMFS is ok
[2026-02-28 05:01:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-28 05:01:19] Checking for apptainer binary...
[2026-02-28 05:01:19] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-28 05:01:19] Running /usr/bin/apptainer --version
[2026-02-28 05:01:19] apptainer version 1.3.2-1.el7
[2026-02-28 05:01:19] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-28 05:01:21] cg-vwn376.simple-grid.lan
[2026-02-28 05:01:21] apptainer works
[2026-02-28 05:01:21] Set ATHENA_PROC_NUMBER=8
[2026-02-28 05:01:21] Set ATHENA_CORE_NUMBER=8
[2026-02-28 05:01:21] Starting ATLAS job with PandaID=7031579388
[2026-02-28 05:01:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/18 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-28 07:45:00]  *** The last 200 lines of the pilot log: ***
[2026-02-28 07:45:00] 2026-02-28 06:44:05,243 | INFO     | extracted standard memory fields from prmon json
[2026-02-28 07:45:00] 2026-02-28 06:44:05,243 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-28 07:45:00] 2026-02-28 06:44:05,244 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-28 07:45:00] 2026-02-28 06:44:05,244 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-28 07:45:00] 2026-02-28 06:44:05,247 | INFO     | fitting pss+swap vs Time
[2026-02-28 07:45:00] 2026-02-28 06:44:05,248 | INFO     | sum of square deviations: 1246386160.0
[2026-02-28 07:45:00] 2026-02-28 06:44:05,249 | INFO     | sum of deviations: 17122694082.999998
[2026-02-28 07:45:00] 2026-02-28 06:44:05,249 | INFO     | mean x: 1772256195.0
[2026-02-28 07:45:00] 2026-02-28 06:44:05,249 | INFO     | mean y: 2470692.459119497
[2026-02-28 07:45:00] 2026-02-28 06:44:05,249 | INFO     | intersect: -24344558853.894794
[2026-02-28 07:45:00] 2026-02-28 06:44:05,250 | INFO     | chi2: 2.2157661049436617
[2026-02-28 07:45:00] 2026-02-28 06:44:05,250 | INFO     | sum of square deviations: 1132458442.5
[2026-02-28 07:45:00] 2026-02-28 06:44:05,251 | INFO     | sum of deviations: 26921172150.999996
[2026-02-28 07:45:00] 2026-02-28 06:44:05,251 | INFO     | mean x: 1772256042.5
[2026-02-28 07:45:00] 2026-02-28 06:44:05,251 | INFO     | mean y: 2483448.324675325
[2026-02-28 07:45:00] 2026-02-28 06:44:05,251 | INFO     | intersect: -42128166317.91827
[2026-02-28 07:45:00] 2026-02-28 06:44:05,252 | INFO     | chi2: 1.4427911856817404
[2026-02-28 07:45:00] 2026-02-28 06:44:05,252 | INFO     | current chi2=1.4427911856817404 (change=34.885221754106354 %)
[2026-02-28 07:45:00] 2026-02-28 06:44:05,252 | INFO     | sum of square deviations: 1025693650.0
[2026-02-28 07:45:00] 2026-02-28 06:44:05,253 | INFO     | sum of deviations: 25972310258.000008
[2026-02-28 07:45:00] 2026-02-28 06:44:05,253 | INFO     | mean x: 1772255890.0
[2026-02-28 07:45:00] 2026-02-28 06:44:05,253 | INFO     | mean y: 2482092.536912752
[2026-02-28 07:45:00] 2026-02-28 06:44:05,253 | INFO     | intersect: -44874055684.26217
[2026-02-28 07:45:00] 2026-02-28 06:44:05,254 | INFO     | chi2: 1.4435357780591638
[2026-02-28 07:45:00] 2026-02-28 06:44:05,254 | INFO     | current chi2=1.4435357780591638 (change=-0.051607771437249476 %)
[2026-02-28 07:45:00] 2026-02-28 06:44:05,254 | INFO     | right removable region: 148
[2026-02-28 07:45:00] 2026-02-28 06:44:05,254 | INFO     | sum of square deviations: 1132458442.5
[2026-02-28 07:45:00] 2026-02-28 06:44:05,255 | INFO     | sum of deviations: -6193316153.0
[2026-02-28 07:45:00] 2026-02-28 06:44:05,255 | INFO     | mean x: 1772256347.5
[2026-02-28 07:45:00] 2026-02-28 06:44:05,255 | INFO     | mean y: 2501428.922077922
[2026-02-28 07:45:00] 2026-02-28 06:44:05,255 | INFO     | intersect: 9694816353.960514
[2026-02-28 07:45:00] 2026-02-28 06:44:05,256 | INFO     | chi2: 0.8115625576563558
[2026-02-28 07:45:00] 2026-02-28 06:44:05,256 | INFO     | current chi2=0.8115625576563558 (change=63.37327501103774 %)
[2026-02-28 07:45:00] 2026-02-28 06:44:05,256 | INFO     | sum of square deviations: 1025693650.0
[2026-02-28 07:45:00] 2026-02-28 06:44:05,257 | INFO     | sum of deviations: -6774542270.0
[2026-02-28 07:45:00] 2026-02-28 06:44:05,257 | INFO     | mean x: 1772256500.0
[2026-02-28 07:45:00] 2026-02-28 06:44:05,257 | INFO     | mean y: 2502209.0738255032
[2026-02-28 07:45:00] 2026-02-28 06:44:05,257 | INFO     | intersect: 11707972524.24274
[2026-02-28 07:45:00] 2026-02-28 06:44:05,258 | INFO     | chi2: 0.8014318182290905
[2026-02-28 07:45:00] 2026-02-28 06:44:05,258 | INFO     | current chi2=0.8014318182290905 (change=1.2483004953457932 %)
[2026-02-28 07:45:00] 2026-02-28 06:44:05,258 | INFO     | left removable region: 20
[2026-02-28 07:45:00] 2026-02-28 06:44:05,258 | INFO     | sum of square deviations: 650252192.0
[2026-02-28 07:45:00] 2026-02-28 06:44:05,259 | INFO     | sum of deviations: 844189034.5
[2026-02-28 07:45:00] 2026-02-28 06:44:05,259 | INFO     | mean x: 1772256469.5
[2026-02-28 07:45:00] 2026-02-28 06:44:05,259 | INFO     | mean y: 2520484.3828125
[2026-02-28 07:45:00] 2026-02-28 06:44:05,259 | INFO     | intersect: -2298309095.7096815
[2026-02-28 07:45:00] 2026-02-28 06:44:05,259 | INFO     | chi2: 6.584082267082539e-05
[2026-02-28 07:45:00] 2026-02-28 06:44:05,260 | INFO     | current memory leak: 1.30 B/s (using 128 data points, chi2=0.00)
[2026-02-28 07:45:00] 2026-02-28 06:44:05,260 | INFO     | could have reported an average CPU frequency of 1999 MHz (9 samples)
[2026-02-28 07:45:00] 2026-02-28 06:44:05,260 | INFO     | ..............................
[2026-02-28 07:45:00] 2026-02-28 06:44:05,260 | INFO     | . Timing measurements:
[2026-02-28 07:45:00] 2026-02-28 06:44:05,260 | INFO     | . get job = 0 s
[2026-02-28 07:45:00] 2026-02-28 06:44:05,261 | INFO     | . initial setup = 7 s
[2026-02-28 07:45:00] 2026-02-28 06:44:05,261 | INFO     | . payload setup = 8 s
[2026-02-28 07:45:00] 2026-02-28 06:44:05,261 | INFO     | . stage-in = 0 s
[2026-02-28 07:45:00] 2026-02-28 06:44:05,261 | INFO     | . payload execution = 9668 s
[2026-02-28 07:45:00] 2026-02-28 06:44:05,261 | INFO     | . stage-out = 1 s
[2026-02-28 07:45:00] 2026-02-28 06:44:05,261 | INFO     | . log creation = 0 s
[2026-02-28 07:45:00] 2026-02-28 06:44:05,261 | INFO     | ..............................
[2026-02-28 07:45:00] 2026-02-28 06:44:05,371 | INFO     | 
[2026-02-28 07:45:00] 2026-02-28 06:44:05,372 | INFO     | job summary report
[2026-02-28 07:45:00] 2026-02-28 06:44:05,372 | INFO     | --------------------------------------------------
[2026-02-28 07:45:00] 2026-02-28 06:44:05,372 | INFO     | PanDA job id: 7031579388
[2026-02-28 07:45:00] 2026-02-28 06:44:05,372 | INFO     | task id: 48843331
[2026-02-28 07:45:00] 2026-02-28 06:44:05,372 | INFO     | errors: (none)
[2026-02-28 07:45:00] 2026-02-28 06:44:05,372 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-28 07:45:00] 2026-02-28 06:44:05,372 | INFO     | pilot state: finished 
[2026-02-28 07:45:00] 2026-02-28 06:44:05,372 | INFO     | transexitcode: 0
[2026-02-28 07:45:00] 2026-02-28 06:44:05,373 | INFO     | exeerrorcode: 0
[2026-02-28 07:45:00] 2026-02-28 06:44:05,373 | INFO     | exeerrordiag: 
[2026-02-28 07:45:00] 2026-02-28 06:44:05,373 | INFO     | exitcode: 0
[2026-02-28 07:45:00] 2026-02-28 06:44:05,373 | INFO     | exitmsg: OK
[2026-02-28 07:45:00] 2026-02-28 06:44:05,373 | INFO     | cpuconsumptiontime: 72734 s
[2026-02-28 07:45:00] 2026-02-28 06:44:05,373 | INFO     | nevents: 400
[2026-02-28 07:45:00] 2026-02-28 06:44:05,373 | INFO     | neventsw: 0
[2026-02-28 07:45:00] 2026-02-28 06:44:05,373 | INFO     | pid: 21373
[2026-02-28 07:45:00] 2026-02-28 06:44:05,373 | INFO     | pgrp: 21373
[2026-02-28 07:45:00] 2026-02-28 06:44:05,373 | INFO     | corecount: 8
[2026-02-28 07:45:00] 2026-02-28 06:44:05,373 | INFO     | event service: False
[2026-02-28 07:45:00] 2026-02-28 06:44:05,374 | INFO     | sizes: {0: 2281901, 1: 2282362, 2: 2282362, 9680: 2310939, 9681: 2319939, 9683: 2319995, 9685: 2320381}
[2026-02-28 07:45:00] 2026-02-28 06:44:05,374 | INFO     | --------------------------------------------------
[2026-02-28 07:45:00] 2026-02-28 06:44:05,374 | INFO     | 
[2026-02-28 07:45:00] 2026-02-28 06:44:05,374 | INFO     | executing command: ls -lF /var/lib/boinc/slots/18
[2026-02-28 07:45:00] 2026-02-28 06:44:05,407 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-28 07:45:00] 2026-02-28 06:44:05,408 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-28 07:45:00] 2026-02-28 06:44:05,408 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-28 07:45:00] 2026-02-28 06:44:05,408 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-28 07:45:00] 2026-02-28 06:44:05,408 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-28 07:45:00] 2026-02-28 06:44:05,408 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-28 07:45:00] 2026-02-28 06:44:05,408 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-28 07:45:00] 2026-02-28 06:44:05,408 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-28 07:45:00] 2026-02-28 06:44:05,408 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-28 07:45:00] 2026-02-28 06:44:05,408 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-28 07:45:00] 2026-02-28 06:44:05,409 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-28 07:45:00] 2026-02-28 06:44:05,409 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-28 07:45:00] 2026-02-28 06:44:05,409 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-28 07:45:00] 2026-02-28 06:44:05,409 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-28 07:45:00] 2026-02-28 06:44:05,409 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-28 07:45:00] 2026-02-28 06:44:05,409 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-28 07:45:00] 2026-02-28 06:44:05,409 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-28 07:45:00] 2026-02-28 06:44:05,409 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-28 07:45:00] 2026-02-28 06:44:05,409 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-28 07:45:00] 2026-02-28 06:44:05,410 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-28 07:45:00] 2026-02-28 06:44:05,410 | INFO     | job 7031579388 has completed (purged errors)
[2026-02-28 07:45:00] 2026-02-28 06:44:05,410 | INFO     | overall cleanup function is called
[2026-02-28 07:45:00] 2026-02-28 06:44:06,202 | WARNING  | process 21373 can no longer be monitored (due to stat problems) - aborting
[2026-02-28 07:45:00] 2026-02-28 06:44:06,252 | INFO     | using path: /var/lib/boinc/slots/18/memory_monitor_summary.json (trf name=prmon)
[2026-02-28 07:45:00] 2026-02-28 06:44:06,314 | INFO     | number of running child processes to parent process 21373: 1
[2026-02-28 07:45:00] 2026-02-28 06:44:06,314 | INFO     | maximum number of monitored processes: 6
[2026-02-28 07:45:00] 2026-02-28 06:44:06,314 | INFO     | aborting job monitoring since job object (job id=7031579388) has expired
[2026-02-28 07:45:00] 2026-02-28 06:44:06,418 | INFO     | --- collectZombieJob: --- 10, [21373]
[2026-02-28 07:45:00] 2026-02-28 06:44:06,419 | INFO     | zombie collector waiting for pid 21373
[2026-02-28 07:45:00] 2026-02-28 06:44:06,419 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-28 07:45:00] 2026-02-28 06:44:06,419 | INFO     | collected zombie processes
[2026-02-28 07:45:00] 2026-02-28 06:44:06,419 | INFO     | will attempt to kill all subprocesses of pid=21373
[2026-02-28 07:45:00] 2026-02-28 06:44:06,477 | INFO     | process IDs to be killed: [21373] (in reverse order)
[2026-02-28 07:45:00] 2026-02-28 06:44:06,526 | WARNING  | found no corresponding commands to process id(s)
[2026-02-28 07:45:00] 2026-02-28 06:44:06,527 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-28 07:45:00] 2026-02-28 06:44:06,529 | INFO     | did not find any defunct processes belonging to 21373
[2026-02-28 07:45:00] 2026-02-28 06:44:06,530 | INFO     | did not find any defunct processes belonging to 21373
[2026-02-28 07:45:00] 2026-02-28 06:44:06,531 | INFO     | ready for new job
[2026-02-28 07:45:00] 2026-02-28 06:44:06,531 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-28 07:45:00] 2026-02-28 06:44:06,533 | INFO     | **************************************
[2026-02-28 07:45:00] 2026-02-28 06:44:06,533 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-28 07:45:00] 2026-02-28 06:44:06,533 | INFO     | **************************************
[2026-02-28 07:45:00] 2026-02-28 06:44:06,533 | INFO     | 
[2026-02-28 07:45:00] 2026-02-28 06:44:06,534 | INFO     | pilot is running in a VM
[2026-02-28 07:45:00] 2026-02-28 06:44:06,534 | INFO     | architecture information:
[2026-02-28 07:45:00] 2026-02-28 06:44:06,534 | INFO     | executing command: cat /etc/os-release
[2026-02-28 07:45:00] 2026-02-28 06:44:06,556 | INFO     | cat /etc/os-release:
[2026-02-28 07:45:00] NAME="CentOS Linux"
[2026-02-28 07:45:00] VERSION="7 (Core)"
[2026-02-28 07:45:00] ID="centos"
[2026-02-28 07:45:00] ID_LIKE="rhel fedora"
[2026-02-28 07:45:00] VERSION_ID="7"
[2026-02-28 07:45:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-28 07:45:00] ANSI_COLOR="0;31"
[2026-02-28 07:45:00] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-28 07:45:00] HOME_URL="https://www.centos.org/"
[2026-02-28 07:45:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-28 07:45:00] 
[2026-02-28 07:45:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-28 07:45:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-28 07:45:00] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-28 07:45:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-28 07:45:00] 
[2026-02-28 07:45:00] 2026-02-28 06:44:06,556 | INFO     | **************************************
[2026-02-28 07:45:00] 2026-02-28 06:44:07,059 | INFO     | executing command: df -mP /var/lib/boinc/slots/18
[2026-02-28 07:45:00] 2026-02-28 06:44:07,082 | INFO     | sufficient remaining disk space (497818796032 B)
[2026-02-28 07:45:00] 2026-02-28 06:44:07,082 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-28 07:45:00] 2026-02-28 06:44:07,083 | INFO     | current server update state: UPDATING_FINAL
[2026-02-28 07:45:00] 2026-02-28 06:44:07,083 | INFO     | update_server=False
[2026-02-28 07:45:00] 2026-02-28 06:44:07,083 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-28 07:45:00] 2026-02-28 06:44:07,083 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-28 07:45:00] 2026-02-28 06:44:07,084 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-28 07:45:00] 2026-02-28 06:44:07,084 | INFO     | will abort loop
[2026-02-28 07:45:00] 2026-02-28 06:44:07,145 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-28 07:45:00] 2026-02-28 06:44:07,557 | INFO     | all payload control threads have been joined
[2026-02-28 07:45:00] 2026-02-28 06:44:07,782 | INFO     | all data control threads have been joined
[2026-02-28 07:45:00] 2026-02-28 06:44:08,088 | INFO     | [job] queue monitor thread has finished
[2026-02-28 07:45:00] 2026-02-28 06:44:08,089 | INFO     | [job] retrieve thread has finished
[2026-02-28 07:45:00] 2026-02-28 06:44:08,090 | INFO     | [job] job monitor thread has finished
[2026-02-28 07:45:00] 2026-02-28 06:44:08,249 | INFO     | [job] validate thread has finished
[2026-02-28 07:45:00] 2026-02-28 06:44:08,350 | INFO     | [data] copytool_in thread has finished
[2026-02-28 07:45:00] 2026-02-28 06:44:08,563 | INFO     | [payload] control thread has finished
[2026-02-28 07:45:00] 2026-02-28 06:44:08,621 | INFO     | [payload] validate_pre thread has finished
[2026-02-28 07:45:00] 2026-02-28 06:44:08,758 | INFO     | [job] create_data_payload thread has finished
[2026-02-28 07:45:00] 2026-02-28 06:44:08,764 | INFO     | all job control threads have been joined
[2026-02-28 07:45:00] 2026-02-28 06:44:08,788 | INFO     | [data] control thread has finished
[2026-02-28 07:45:00] 2026-02-28 06:44:08,889 | INFO     | [payload] execute_payloads thread has finished
[2026-02-28 07:45:00] 2026-02-28 06:44:09,151 | INFO     | [data] copytool_out thread has finished
[2026-02-28 07:45:00] 2026-02-28 06:44:09,196 | INFO     | [payload] failed_post thread has finished
[2026-02-28 07:45:00] 2026-02-28 06:44:09,223 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-28 07:45:00] 2026-02-28 06:44:09,516 | INFO     | [payload] validate_post thread has finished
[2026-02-28 07:45:00] 2026-02-28 06:44:09,769 | INFO     | [job] control thread has finished
[2026-02-28 07:45:00] 2026-02-28 06:44:13,229 | INFO     | [data] queue_monitor thread has finished
[2026-02-28 07:45:00] 2026-02-28 06:44:18,082 | INFO     | job.realtimelogging is not enabled
[2026-02-28 07:45:00] 2026-02-28 06:44:19,087 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-28 07:45:00] 2026-02-28 06:44:36,908 | INFO     | PID=16962 has CPU usage=5.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-02-28 07:45:00] 2026-02-28 06:44:36,909 | INFO     | found 0 job(s) in 20 queues
[2026-02-28 07:45:00] 2026-02-28 06:44:36,909 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-28 07:45:00] 2026-02-28 06:44:36,909 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-28 07:45:00] 2026-02-28 06:44:54,179 | INFO     | [monitor] cgroup control has ended
[2026-02-28 07:45:00] 2026-02-28 06:44:55,059 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140526545323840)>', '<ExcThread(monitor, started 140525894104832)>']
[2026-02-28 07:45:00] 2026-02-28 06:44:55,966 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-28 07:45:00] 2026-02-28 06:44:55,967 | INFO     | [monitor] control thread has ended
[2026-02-28 07:45:00] 2026-02-28 06:45:00,085 | INFO     | all workflow threads have been joined
[2026-02-28 07:45:00] 2026-02-28 06:45:00,085 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-28 07:45:00] 2026-02-28 06:45:00,085 | INFO     | traces error code: 0
[2026-02-28 07:45:00] 2026-02-28 06:45:00,086 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-28 07:45:00] 2026-02-28 06:45:00,251 [wrapper] ==== pilot stdout END ====
[2026-02-28 07:45:00] 2026-02-28 06:45:00,257 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-28 07:45:00] 2026-02-28 06:45:00,267 [wrapper] pilotpid: 16962
[2026-02-28 07:45:00] 2026-02-28 06:45:00,278 [wrapper] Pilot exit status: 0
[2026-02-28 07:45:00] 2026-02-28 06:45:00,320 [wrapper] pandaids: 7031579388
[2026-02-28 07:45:00] 2026-02-28 06:45:00,387 [wrapper] cleanup supervisor_pilot 26732 16963
[2026-02-28 07:45:00] 2026-02-28 06:45:00,397 [wrapper] Test setup, not cleaning
[2026-02-28 07:45:00] 2026-02-28 06:45:00,403 [wrapper] apfmon messages muted
[2026-02-28 07:45:00] 2026-02-28 06:45:00,408 [wrapper] ==== wrapper stdout END ====
[2026-02-28 07:45:00] 2026-02-28 06:45:00,414 [wrapper] ==== wrapper stderr END ====
[2026-02-28 07:45:00]  *** Error codes and diagnostics ***
[2026-02-28 07:45:00]     "exeErrorCode": 0,
[2026-02-28 07:45:00]     "exeErrorDiag": "",
[2026-02-28 07:45:00]     "pilotErrorCode": 0,
[2026-02-28 07:45:00]     "pilotErrorDiag": "",
[2026-02-28 07:45:00]  *** Listing of results directory ***
[2026-02-28 07:45:00] total 463776
[2026-02-28 07:45:00] -rw-r--r--. 1 boinc boinc    584627 Feb 27 15:37 pilot3.tar.gz
[2026-02-28 07:45:00] -rwx------. 1 boinc boinc     36322 Feb 27 15:39 runpilot2-wrapper.sh
[2026-02-28 07:45:00] -rw-r--r--. 1 boinc boinc      5111 Feb 27 15:41 queuedata.json
[2026-02-28 07:45:00] -rw-r--r--. 1 boinc boinc       100 Feb 28 05:01 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-28 07:45:00] -rwxr-xr-x. 1 boinc boinc      7986 Feb 28 05:01 run_atlas
[2026-02-28 07:45:00] -rw-r--r--. 1 boinc boinc       105 Feb 28 05:01 job.xml
[2026-02-28 07:45:00] -rw-r--r--. 2 boinc boinc 266540062 Feb 28 05:01 EVNT.48450726._000003.pool.root.1
[2026-02-28 07:45:00] -rw-r--r--. 1 boinc boinc      6392 Feb 28 05:01 init_data.xml
[2026-02-28 07:45:00] -rw-r--r--. 2 boinc boinc     15845 Feb 28 05:01 start_atlas.sh
[2026-02-28 07:45:00] drwxrwx--x. 2 boinc boinc        68 Feb 28 05:01 shared
[2026-02-28 07:45:00] -rw-r--r--. 2 boinc boinc    597959 Feb 28 05:01 input.tar.gz
[2026-02-28 07:45:00] -rw-r--r--. 1 boinc boinc         0 Feb 28 05:01 boinc_lockfile
[2026-02-28 07:45:00] -rw-r--r--. 1 boinc boinc      2608 Feb 28 05:01 pandaJob.out
[2026-02-28 07:45:00] -rw-------. 1 boinc boinc    998782 Feb 28 05:02 agis_schedconf.cvmfs.json
[2026-02-28 07:45:00] -rw-------. 1 boinc boinc   1513015 Feb 28 05:02 agis_ddmendpoints.agis.ALL.json
[2026-02-28 07:45:00] -rw-------. 1 boinc boinc       415 Feb 28 05:02 workernode_map.json
[2026-02-28 07:45:00] drwx------. 5 boinc boinc      4096 Feb 28 05:02 pilot3
[2026-02-28 07:45:00] -rw-------. 1 boinc boinc 200975019 Feb 28 07:43 HITS.48843331._000052.pool.root.1
[2026-02-28 07:45:00] -rw-r--r--. 1 boinc boinc       529 Feb 28 07:43 boinc_task_state.xml
[2026-02-28 07:45:00] -rw-------. 1 boinc boinc      1012 Feb 28 07:43 memory_monitor_summary.json
[2026-02-28 07:45:00] -rw-------. 1 boinc boinc    381393 Feb 28 07:44 log.48843331._000052.job.log.tgz.1
[2026-02-28 07:45:00] -rw-------. 1 boinc boinc      6294 Feb 28 07:44 heartbeat.json
[2026-02-28 07:45:00] -rw-r--r--. 1 boinc boinc        27 Feb 28 07:44 wrapper_checkpoint.txt
[2026-02-28 07:45:00] -rw-r--r--. 1 boinc boinc      8192 Feb 28 07:44 boinc_mmap_file
[2026-02-28 07:45:00] -rw-------. 1 boinc boinc        95 Feb 28 07:44 pilot_heartbeat.json
[2026-02-28 07:45:00] -rw-------. 1 boinc boinc      4880 Feb 28 07:45 pilotlog.txt
[2026-02-28 07:45:00] -rw-------. 1 boinc boinc   1357083 Feb 28 07:45 log.48843331._000052.job.log.1
[2026-02-28 07:45:00] -rw-------. 1 boinc boinc       357 Feb 28 07:45 output.list
[2026-02-28 07:45:00] -rw-r--r--. 1 boinc boinc       620 Feb 28 07:45 runtime_log
[2026-02-28 07:45:00] -rw-------. 1 boinc boinc   1751040 Feb 28 07:45 result.tar.gz
[2026-02-28 07:45:00] -rw-r--r--. 1 boinc boinc      8831 Feb 28 07:45 runtime_log.err
[2026-02-28 07:45:00] -rw-------. 1 boinc boinc       652 Feb 28 07:45 lmdKDmbBEG9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmA84KDmFqzLyn.diag
[2026-02-28 07:45:00] -rw-r--r--. 1 boinc boinc     20730 Feb 28 07:45 stderr.txt
[2026-02-28 07:45:00] HITS file was successfully produced:
[2026-02-28 07:45:00] -rw-------. 1 boinc boinc 200975019 Feb 28 07:43 shared/HITS.pool.root.1
[2026-02-28 07:45:00]  *** Contents of shared directory: ***
[2026-02-28 07:45:00] total 458876
[2026-02-28 07:45:00] -rw-r--r--. 2 boinc boinc 266540062 Feb 28 05:01 ATLAS.root_0
[2026-02-28 07:45:00] -rw-r--r--. 2 boinc boinc     15845 Feb 28 05:01 start_atlas.sh
[2026-02-28 07:45:00] -rw-r--r--. 2 boinc boinc    597959 Feb 28 05:01 input.tar.gz
[2026-02-28 07:45:00] -rw-------. 1 boinc boinc 200975019 Feb 28 07:43 HITS.pool.root.1
[2026-02-28 07:45:00] -rw-------. 1 boinc boinc   1751040 Feb 28 07:45 result.tar.gz
07:45:01 (12909): run_atlas exited; CPU time 72793.741411
07:45:01 (12909): called boinc_finish(0)

</stderr_txt>
]]>

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