Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
14:09:14 (9872): wrapper (7.7.26015): starting
14:09:14 (9872): wrapper: running run_atlas (--nthreads 8)
[2026-02-27 14:09:14] Arguments: --nthreads 8
[2026-02-27 14:09:14] Threads: 8
[2026-02-27 14:09:14] Checking for CVMFS
[2026-02-27 14:09:14] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-27 14:09:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-27 14:09:14] Running cvmfs_config stat atlas.cern.ch
[2026-02-27 14:09:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-27 14:09:14] 2.11.2.0 14221 251988 162676 156705 1 49 10425265 18432000 1833 130560 0 162034925 99.982 9272660 29349 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-02-27 14:09:14] CVMFS is ok
[2026-02-27 14:09:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-27 14:09:14] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-27 14:09:14] Further information can be found at the LHC@home message board.
[2026-02-27 14:09:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-27 14:09:14] Checking for apptainer binary...
[2026-02-27 14:09:14] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-27 14:09:14] Running /usr/bin/apptainer --version
[2026-02-27 14:09:14] apptainer version 1.3.2-1.el7
[2026-02-27 14:09:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-27 14:09:15] c-206-9.aglt2.org
[2026-02-27 14:09:15] apptainer works
[2026-02-27 14:09:15] Set ATHENA_PROC_NUMBER=8
[2026-02-27 14:09:15] Set ATHENA_CORE_NUMBER=8
[2026-02-27 14:09:15] Starting ATLAS job with PandaID=7031558739
[2026-02-27 14:09:15] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-27 17:39:57]  *** The last 200 lines of the pilot log: ***
[2026-02-27 17:39:57] 2026-02-27 22:39:03,395 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-27 17:39:57] 2026-02-27 22:39:03,395 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-27 17:39:57] 2026-02-27 22:39:03,401 | INFO     | fitting pss+swap vs Time
[2026-02-27 17:39:57] 2026-02-27 22:39:03,402 | INFO     | sum of square deviations: 2710627567.5
[2026-02-27 17:39:57] 2026-02-27 22:39:03,403 | INFO     | sum of deviations: 38480588001.50002
[2026-02-27 17:39:57] 2026-02-27 22:39:03,403 | INFO     | mean x: 1772225643.5
[2026-02-27 17:39:57] 2026-02-27 22:39:03,404 | INFO     | mean y: 2491082.325242718
[2026-02-27 17:39:57] 2026-02-27 22:39:03,404 | INFO     | intersect: -25156363513.149082
[2026-02-27 17:39:57] 2026-02-27 22:39:03,404 | INFO     | chi2: 1.3971318973945763
[2026-02-27 17:39:57] 2026-02-27 22:39:03,405 | INFO     | sum of square deviations: 2518000700.0
[2026-02-27 17:39:57] 2026-02-27 22:39:03,407 | INFO     | sum of deviations: 37192730412.0
[2026-02-27 17:39:57] 2026-02-27 22:39:03,407 | INFO     | mean x: 1772225491.0
[2026-02-27 17:39:57] 2026-02-27 22:39:03,407 | INFO     | mean y: 2490062.552238806
[2026-02-27 17:39:57] 2026-02-27 22:39:03,407 | INFO     | intersect: -26174589600.704937
[2026-02-27 17:39:57] 2026-02-27 22:39:03,408 | INFO     | chi2: 1.3976335946790146
[2026-02-27 17:39:57] 2026-02-27 22:39:03,408 | INFO     | current chi2=1.3976335946790146 (change=-0.03590908527490194 %)
[2026-02-27 17:39:57] 2026-02-27 22:39:03,408 | INFO     | right removable region: 200
[2026-02-27 17:39:57] 2026-02-27 22:39:03,408 | INFO     | sum of square deviations: 2518000700.0
[2026-02-27 17:39:57] 2026-02-27 22:39:03,410 | INFO     | sum of deviations: 9205370798.000002
[2026-02-27 17:39:57] 2026-02-27 22:39:03,410 | INFO     | mean x: 1772225796.0
[2026-02-27 17:39:57] 2026-02-27 22:39:03,410 | INFO     | mean y: 2513988.4029850746
[2026-02-27 17:39:57] 2026-02-27 22:39:03,411 | INFO     | intersect: -6476434007.902461
[2026-02-27 17:39:57] 2026-02-27 22:39:03,411 | INFO     | chi2: 0.07884588340633875
[2026-02-27 17:39:57] 2026-02-27 22:39:03,411 | INFO     | current chi2=0.07884588340633875 (change=94.35658984285065 %)
[2026-02-27 17:39:57] 2026-02-27 22:39:03,412 | INFO     | sum of square deviations: 2334722845.0
[2026-02-27 17:39:57] 2026-02-27 22:39:03,413 | INFO     | sum of deviations: 617596818.0
[2026-02-27 17:39:57] 2026-02-27 22:39:03,414 | INFO     | mean x: 1772225948.5
[2026-02-27 17:39:57] 2026-02-27 22:39:03,414 | INFO     | mean y: 2521086.8775510206
[2026-02-27 17:39:57] 2026-02-27 22:39:03,414 | INFO     | intersect: -466280213.8484167
[2026-02-27 17:39:57] 2026-02-27 22:39:03,414 | INFO     | chi2: 0.002010862050184165
[2026-02-27 17:39:57] 2026-02-27 22:39:03,415 | INFO     | current chi2=0.002010862050184165 (change=97.44962962768643 %)
[2026-02-27 17:39:57] 2026-02-27 22:39:03,415 | INFO     | sum of square deviations: 2160561440.0
[2026-02-27 17:39:57] 2026-02-27 22:39:03,416 | INFO     | sum of deviations: -240628163.99999982
[2026-02-27 17:39:57] 2026-02-27 22:39:03,417 | INFO     | mean x: 1772226101.0
[2026-02-27 17:39:57] 2026-02-27 22:39:03,417 | INFO     | mean y: 2521833.4397905758
[2026-02-27 17:39:57] 2026-02-27 22:39:03,417 | INFO     | intersect: 199899933.86377493
[2026-02-27 17:39:57] 2026-02-27 22:39:03,418 | INFO     | chi2: 0.0012249402223129713
[2026-02-27 17:39:57] 2026-02-27 22:39:03,418 | INFO     | current chi2=0.0012249402223129713 (change=39.083826153028 %)
[2026-02-27 17:39:57] 2026-02-27 22:39:03,418 | INFO     | sum of square deviations: 1995283922.5
[2026-02-27 17:39:57] 2026-02-27 22:39:03,420 | INFO     | sum of deviations: -355893275.9999998
[2026-02-27 17:39:57] 2026-02-27 22:39:03,420 | INFO     | mean x: 1772226253.5
[2026-02-27 17:39:57] 2026-02-27 22:39:03,420 | INFO     | mean y: 2521936.8172043012
[2026-02-27 17:39:57] 2026-02-27 22:39:03,420 | INFO     | intersect: 318629033.1852507
[2026-02-27 17:39:57] 2026-02-27 22:39:03,421 | INFO     | chi2: 0.0011581779063886866
[2026-02-27 17:39:57] 2026-02-27 22:39:03,421 | INFO     | current chi2=0.0011581779063886866 (change=5.4502509353658075 %)
[2026-02-27 17:39:57] 2026-02-27 22:39:03,421 | INFO     | left removable region: 40
[2026-02-27 17:39:57] 2026-02-27 22:39:03,421 | INFO     | sum of square deviations: 1270051720.0
[2026-02-27 17:39:57] 2026-02-27 22:39:03,423 | INFO     | sum of deviations: 185448265.5
[2026-02-27 17:39:57] 2026-02-27 22:39:03,423 | INFO     | mean x: 1772226680.5
[2026-02-27 17:39:57] 2026-02-27 22:39:03,423 | INFO     | mean y: 2520632.59375
[2026-02-27 17:39:57] 2026-02-27 22:39:03,423 | INFO     | intersect: -256253367.54818726
[2026-02-27 17:39:57] 2026-02-27 22:39:03,424 | INFO     | chi2: 0.0005594108481449988
[2026-02-27 17:39:57] 2026-02-27 22:39:03,424 | INFO     | current memory leak: 0.15 B/s (using 160 data points, chi2=0.00)
[2026-02-27 17:39:57] 2026-02-27 22:39:03,424 | INFO     | could have reported an average CPU frequency of 2367 MHz (10 samples)
[2026-02-27 17:39:57] 2026-02-27 22:39:03,425 | INFO     | ..............................
[2026-02-27 17:39:57] 2026-02-27 22:39:03,425 | INFO     | . Timing measurements:
[2026-02-27 17:39:57] 2026-02-27 22:39:03,425 | INFO     | . get job = 0 s
[2026-02-27 17:39:57] 2026-02-27 22:39:03,425 | INFO     | . initial setup = 6 s
[2026-02-27 17:39:57] 2026-02-27 22:39:03,425 | INFO     | . payload setup = 5 s
[2026-02-27 17:39:57] 2026-02-27 22:39:03,425 | INFO     | . stage-in = 0 s
[2026-02-27 17:39:57] 2026-02-27 22:39:03,426 | INFO     | . payload execution = 12547 s
[2026-02-27 17:39:57] 2026-02-27 22:39:03,426 | INFO     | . stage-out = 2 s
[2026-02-27 17:39:57] 2026-02-27 22:39:03,426 | INFO     | . log creation = 0 s
[2026-02-27 17:39:57] 2026-02-27 22:39:03,426 | INFO     | ..............................
[2026-02-27 17:39:57] 2026-02-27 22:39:03,846 | INFO     | 
[2026-02-27 17:39:57] 2026-02-27 22:39:03,846 | INFO     | job summary report
[2026-02-27 17:39:57] 2026-02-27 22:39:03,846 | INFO     | --------------------------------------------------
[2026-02-27 17:39:57] 2026-02-27 22:39:03,846 | INFO     | PanDA job id: 7031558739
[2026-02-27 17:39:57] 2026-02-27 22:39:03,846 | INFO     | task id: 48838521
[2026-02-27 17:39:57] 2026-02-27 22:39:03,847 | INFO     | errors: (none)
[2026-02-27 17:39:57] 2026-02-27 22:39:03,847 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-27 17:39:57] 2026-02-27 22:39:03,847 | INFO     | pilot state: finished 
[2026-02-27 17:39:57] 2026-02-27 22:39:03,847 | INFO     | transexitcode: 0
[2026-02-27 17:39:57] 2026-02-27 22:39:03,847 | INFO     | exeerrorcode: 0
[2026-02-27 17:39:57] 2026-02-27 22:39:03,847 | INFO     | exeerrordiag: 
[2026-02-27 17:39:57] 2026-02-27 22:39:03,848 | INFO     | exitcode: 0
[2026-02-27 17:39:57] 2026-02-27 22:39:03,848 | INFO     | exitmsg: OK
[2026-02-27 17:39:57] 2026-02-27 22:39:03,848 | INFO     | cpuconsumptiontime: 94890 s
[2026-02-27 17:39:57] 2026-02-27 22:39:03,848 | INFO     | nevents: 400
[2026-02-27 17:39:57] 2026-02-27 22:39:03,848 | INFO     | neventsw: 0
[2026-02-27 17:39:57] 2026-02-27 22:39:03,848 | INFO     | pid: 18095
[2026-02-27 17:39:57] 2026-02-27 22:39:03,849 | INFO     | pgrp: 18095
[2026-02-27 17:39:57] 2026-02-27 22:39:03,849 | INFO     | corecount: 8
[2026-02-27 17:39:57] 2026-02-27 22:39:03,849 | INFO     | event service: False
[2026-02-27 17:39:57] 2026-02-27 22:39:03,849 | INFO     | sizes: {0: 2281837, 1: 2282298, 12: 2282298, 12556: 2312293, 12559: 2321347, 12561: 2321485}
[2026-02-27 17:39:57] 2026-02-27 22:39:03,849 | INFO     | --------------------------------------------------
[2026-02-27 17:39:57] 2026-02-27 22:39:03,849 | INFO     | 
[2026-02-27 17:39:57] 2026-02-27 22:39:03,850 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-02-27 17:39:57] 2026-02-27 22:39:03,871 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-27 17:39:57] 2026-02-27 22:39:03,871 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-27 17:39:57] 2026-02-27 22:39:03,872 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-27 17:39:57] 2026-02-27 22:39:03,872 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-27 17:39:57] 2026-02-27 22:39:03,872 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-27 17:39:57] 2026-02-27 22:39:03,872 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-27 17:39:57] 2026-02-27 22:39:03,872 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-27 17:39:57] 2026-02-27 22:39:03,872 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-27 17:39:57] 2026-02-27 22:39:03,873 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-27 17:39:57] 2026-02-27 22:39:03,873 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-27 17:39:57] 2026-02-27 22:39:03,873 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-27 17:39:57] 2026-02-27 22:39:03,873 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-27 17:39:57] 2026-02-27 22:39:03,873 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-27 17:39:57] 2026-02-27 22:39:03,873 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-27 17:39:57] 2026-02-27 22:39:03,874 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-27 17:39:57] 2026-02-27 22:39:03,874 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-27 17:39:57] 2026-02-27 22:39:03,874 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-27 17:39:57] 2026-02-27 22:39:03,874 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-27 17:39:57] 2026-02-27 22:39:03,874 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-27 17:39:57] 2026-02-27 22:39:03,874 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-27 17:39:57] 2026-02-27 22:39:03,875 | INFO     | job 7031558739 has completed (purged errors)
[2026-02-27 17:39:57] 2026-02-27 22:39:03,875 | INFO     | overall cleanup function is called
[2026-02-27 17:39:57] 2026-02-27 22:39:04,883 | INFO     | --- collectZombieJob: --- 10, [18095]
[2026-02-27 17:39:57] 2026-02-27 22:39:04,884 | INFO     | zombie collector waiting for pid 18095
[2026-02-27 17:39:57] 2026-02-27 22:39:04,884 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-27 17:39:57] 2026-02-27 22:39:04,884 | INFO     | collected zombie processes
[2026-02-27 17:39:57] 2026-02-27 22:39:04,884 | INFO     | will attempt to kill all subprocesses of pid=18095
[2026-02-27 17:39:57] 2026-02-27 22:39:05,043 | INFO     | process IDs to be killed: [18095] (in reverse order)
[2026-02-27 17:39:57] 2026-02-27 22:39:05,091 | WARNING  | found no corresponding commands to process id(s)
[2026-02-27 17:39:57] 2026-02-27 22:39:05,091 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-27 17:39:57] 2026-02-27 22:39:05,094 | INFO     | did not find any defunct processes belonging to 18095
[2026-02-27 17:39:57] 2026-02-27 22:39:05,096 | INFO     | did not find any defunct processes belonging to 18095
[2026-02-27 17:39:57] 2026-02-27 22:39:05,096 | INFO     | ready for new job
[2026-02-27 17:39:57] 2026-02-27 22:39:05,096 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-27 17:39:57] 2026-02-27 22:39:05,098 | INFO     | **************************************
[2026-02-27 17:39:57] 2026-02-27 22:39:05,098 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-27 17:39:57] 2026-02-27 22:39:05,098 | INFO     | **************************************
[2026-02-27 17:39:57] 2026-02-27 22:39:05,098 | INFO     | 
[2026-02-27 17:39:57] 2026-02-27 22:39:05,099 | INFO     | architecture information:
[2026-02-27 17:39:57] 2026-02-27 22:39:05,099 | INFO     | executing command: cat /etc/os-release
[2026-02-27 17:39:57] 2026-02-27 22:39:05,113 | INFO     | cat /etc/os-release:
[2026-02-27 17:39:57] NAME="CentOS Linux"
[2026-02-27 17:39:57] VERSION="7 (Core)"
[2026-02-27 17:39:57] ID="centos"
[2026-02-27 17:39:57] ID_LIKE="rhel fedora"
[2026-02-27 17:39:57] VERSION_ID="7"
[2026-02-27 17:39:57] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-27 17:39:57] ANSI_COLOR="0;31"
[2026-02-27 17:39:57] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-27 17:39:57] HOME_URL="https://www.centos.org/"
[2026-02-27 17:39:57] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-27 17:39:57] 
[2026-02-27 17:39:57] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-27 17:39:57] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-27 17:39:57] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-27 17:39:57] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-27 17:39:57] 
[2026-02-27 17:39:57] 2026-02-27 22:39:05,113 | INFO     | **************************************
[2026-02-27 17:39:57] 2026-02-27 22:39:05,617 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-02-27 17:39:57] 2026-02-27 22:39:05,633 | INFO     | sufficient remaining disk space (27907850240 B)
[2026-02-27 17:39:57] 2026-02-27 22:39:05,633 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-27 17:39:57] 2026-02-27 22:39:05,633 | INFO     | current server update state: UPDATING_FINAL
[2026-02-27 17:39:57] 2026-02-27 22:39:05,634 | INFO     | update_server=False
[2026-02-27 17:39:57] 2026-02-27 22:39:05,634 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-27 17:39:57] 2026-02-27 22:39:05,634 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-27 17:39:57] 2026-02-27 22:39:05,635 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-27 17:39:57] 2026-02-27 22:39:05,635 | INFO     | aborting loop
[2026-02-27 17:39:57] 2026-02-27 22:39:06,307 | INFO     | all payload control threads have been joined
[2026-02-27 17:39:57] 2026-02-27 22:39:06,640 | INFO     | [job] retrieve thread has finished
[2026-02-27 17:39:57] 2026-02-27 22:39:06,640 | INFO     | [job] job monitor thread has finished
[2026-02-27 17:39:57] 2026-02-27 22:39:06,644 | INFO     | all data control threads have been joined
[2026-02-27 17:39:57] 2026-02-27 22:39:06,890 | INFO     | all job control threads have been joined
[2026-02-27 17:39:57] 2026-02-27 22:39:07,040 | INFO     | [payload] execute_payloads thread has finished
[2026-02-27 17:39:57] 2026-02-27 22:39:07,052 | INFO     | [payload] failed_post thread has finished
[2026-02-27 17:39:57] 2026-02-27 22:39:07,312 | INFO     | [payload] control thread has finished
[2026-02-27 17:39:57] 2026-02-27 22:39:07,316 | INFO     | [data] copytool_in thread has finished
[2026-02-27 17:39:57] 2026-02-27 22:39:07,353 | INFO     | [job] create_data_payload thread has finished
[2026-02-27 17:39:57] 2026-02-27 22:39:07,369 | INFO     | [job] validate thread has finished
[2026-02-27 17:39:57] 2026-02-27 22:39:07,640 | INFO     | [data] copytool_out thread has finished
[2026-02-27 17:39:57] 2026-02-27 22:39:07,649 | INFO     | [data] control thread has finished
[2026-02-27 17:39:57] 2026-02-27 22:39:07,676 | INFO     | [payload] validate_post thread has finished
[2026-02-27 17:39:57] 2026-02-27 22:39:07,896 | INFO     | [job] control thread has finished
[2026-02-27 17:39:57] 2026-02-27 22:39:07,968 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-27 17:39:57] 2026-02-27 22:39:08,077 | INFO     | [payload] validate_pre thread has finished
[2026-02-27 17:39:57] 2026-02-27 22:39:08,386 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-27 17:39:57] 2026-02-27 22:39:08,561 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-27 17:39:57] 2026-02-27 22:39:09,566 | INFO     | [job] queue monitor thread has finished
[2026-02-27 17:39:57] 2026-02-27 22:39:12,393 | INFO     | [data] queue_monitor thread has finished
[2026-02-27 17:39:57] 2026-02-27 22:39:24,959 [wrapper] supervise_pilot (15 min periods counter: 15)
[2026-02-27 17:39:57] 2026-02-27 22:39:36,160 | INFO     | PID=13553 has CPU usage=5.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-02-27 17:39:57] 2026-02-27 22:39:36,160 | INFO     | .. there are 3 such processes running
[2026-02-27 17:39:57] 2026-02-27 22:39:36,160 | INFO     | found 0 job(s) in 20 queues
[2026-02-27 17:39:57] 2026-02-27 22:39:36,160 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-27 17:39:57] 2026-02-27 22:39:36,160 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-27 17:39:57] 2026-02-27 22:39:50,861 | INFO     | [monitor] cgroup control has ended
[2026-02-27 17:39:57] 2026-02-27 22:39:51,753 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140494635341632)>', '<ExcThread(monitor, started 140494034147072)>']
[2026-02-27 17:39:57] 2026-02-27 22:39:52,242 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-27 17:39:57] 2026-02-27 22:39:52,242 | INFO     | [monitor] control thread has ended
[2026-02-27 17:39:57] 2026-02-27 22:39:56,762 | INFO     | all workflow threads have been joined
[2026-02-27 17:39:57] 2026-02-27 22:39:56,762 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-27 17:39:57] 2026-02-27 22:39:56,762 | INFO     | traces error code: 0
[2026-02-27 17:39:57] 2026-02-27 22:39:56,763 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-27 17:39:57] 2026-02-27 22:39:56,889 [wrapper] ==== pilot stdout END ====
[2026-02-27 17:39:57] 2026-02-27 22:39:56,892 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-27 17:39:57] 2026-02-27 22:39:56,893 [wrapper] pilotpid: 13553
[2026-02-27 17:39:57] 2026-02-27 22:39:56,895 [wrapper] Pilot exit status: 0
[2026-02-27 17:39:57] 2026-02-27 22:39:56,904 [wrapper] pandaids: 7031558739
[2026-02-27 17:39:57] 2026-02-27 22:39:56,931 [wrapper] cleanup supervisor_pilot  4382 13554
[2026-02-27 17:39:57] 2026-02-27 22:39:56,933 [wrapper] Test setup, not cleaning
[2026-02-27 17:39:57] 2026-02-27 22:39:56,935 [wrapper] apfmon messages muted
[2026-02-27 17:39:57] 2026-02-27 22:39:56,937 [wrapper] ==== wrapper stdout END ====
[2026-02-27 17:39:57] 2026-02-27 22:39:56,939 [wrapper] ==== wrapper stderr END ====
[2026-02-27 17:39:57]  *** Error codes and diagnostics ***
[2026-02-27 17:39:57]     "exeErrorCode": 0,
[2026-02-27 17:39:57]     "exeErrorDiag": "",
[2026-02-27 17:39:57]     "pilotErrorCode": 0,
[2026-02-27 17:39:57]     "pilotErrorDiag": "",
[2026-02-27 17:39:57]  *** Listing of results directory ***
[2026-02-27 17:39:57] total 474652
[2026-02-27 17:39:57] -rw-r--r-- 1 boincer umatlas    584627 Feb 27 06:42 pilot3.tar.gz
[2026-02-27 17:39:57] -rwx------ 1 boincer umatlas     36322 Feb 27 06:45 runpilot2-wrapper.sh
[2026-02-27 17:39:57] -rw-r--r-- 1 boincer umatlas      5111 Feb 27 06:45 queuedata.json
[2026-02-27 17:39:57] -rw-r--r-- 1 boincer umatlas       100 Feb 27 14:09 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-27 17:39:57] -rwxr-xr-x 1 boincer umatlas      7986 Feb 27 14:09 run_atlas
[2026-02-27 17:39:57] -rw-r--r-- 1 boincer umatlas       105 Feb 27 14:09 job.xml
[2026-02-27 17:39:57] -rw-r--r-- 2 boincer umatlas 271717622 Feb 27 14:09 EVNT.48343683._000033.pool.root.1
[2026-02-27 17:39:57] -rw-r--r-- 2 boincer umatlas     15845 Feb 27 14:09 start_atlas.sh
[2026-02-27 17:39:57] drwxrwx--x 2 boincer umatlas      4096 Feb 27 14:09 shared
[2026-02-27 17:39:57] -rw-r--r-- 2 boincer umatlas    597962 Feb 27 14:09 input.tar.gz
[2026-02-27 17:39:57] -rw-r--r-- 1 boincer umatlas         0 Feb 27 14:09 boinc_lockfile
[2026-02-27 17:39:57] -rw-r--r-- 1 boincer umatlas      2561 Feb 27 14:09 pandaJob.out
[2026-02-27 17:39:57] -rw------- 1 boincer umatlas        57 Feb 27 14:09 setup.sh.local
[2026-02-27 17:39:57] -rw------- 1 boincer umatlas    998790 Feb 27 14:09 agis_schedconf.cvmfs.json
[2026-02-27 17:39:57] -rw------- 1 boincer umatlas       432 Feb 27 14:09 workernode_map.json
[2026-02-27 17:39:57] drwx------ 5 boincer umatlas      4096 Feb 27 14:09 pilot3
[2026-02-27 17:39:57] -rw-r--r-- 1 boincer umatlas      5951 Feb 27 17:37 init_data.xml
[2026-02-27 17:39:57] -rw------- 1 boincer umatlas 205964721 Feb 27 17:38 HITS.48838521._000741.pool.root.1
[2026-02-27 17:39:57] -rw------- 1 boincer umatlas        95 Feb 27 17:38 pilot_heartbeat.json
[2026-02-27 17:39:57] -rw-r--r-- 1 boincer umatlas       530 Feb 27 17:38 boinc_task_state.xml
[2026-02-27 17:39:57] -rw------- 1 boincer umatlas      1053 Feb 27 17:38 memory_monitor_summary.json
[2026-02-27 17:39:57] -rw------- 1 boincer umatlas   1513015 Feb 27 17:39 agis_ddmendpoints.agis.ALL.json
[2026-02-27 17:39:57] -rw------- 1 boincer umatlas    443798 Feb 27 17:39 log.48838521._000741.job.log.tgz.1
[2026-02-27 17:39:57] -rw------- 1 boincer umatlas      6402 Feb 27 17:39 heartbeat.json
[2026-02-27 17:39:57] -rw-r--r-- 1 boincer umatlas      8192 Feb 27 17:39 boinc_mmap_file
[2026-02-27 17:39:57] -rw-r--r-- 1 boincer umatlas        28 Feb 27 17:39 wrapper_checkpoint.txt
[2026-02-27 17:39:57] -rw------- 1 boincer umatlas      4817 Feb 27 17:39 pilotlog.txt
[2026-02-27 17:39:57] -rw------- 1 boincer umatlas   1770679 Feb 27 17:39 log.48838521._000741.job.log.1
[2026-02-27 17:39:57] -rw------- 1 boincer umatlas       357 Feb 27 17:39 output.list
[2026-02-27 17:39:57] -rw-r--r-- 1 boincer umatlas       620 Feb 27 17:39 runtime_log
[2026-02-27 17:39:57] -rw------- 1 boincer umatlas   2232320 Feb 27 17:39 result.tar.gz
[2026-02-27 17:39:57] -rw-r--r-- 1 boincer umatlas      9337 Feb 27 17:39 runtime_log.err
[2026-02-27 17:39:57] -rw------- 1 boincer umatlas       660 Feb 27 17:39 Mv6MDmlSBG9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmov4KDmaSVjqm.diag
[2026-02-27 17:39:57] -rw-r--r-- 1 boincer umatlas     20865 Feb 27 17:39 stderr.txt
[2026-02-27 17:39:57] HITS file was successfully produced:
[2026-02-27 17:39:57] -rw------- 1 boincer umatlas 205964721 Feb 27 17:38 shared/HITS.pool.root.1
[2026-02-27 17:39:57]  *** Contents of shared directory: ***
[2026-02-27 17:39:57] total 469276
[2026-02-27 17:39:57] -rw-r--r-- 2 boincer umatlas 271717622 Feb 27 14:09 ATLAS.root_0
[2026-02-27 17:39:57] -rw-r--r-- 2 boincer umatlas     15845 Feb 27 14:09 start_atlas.sh
[2026-02-27 17:39:57] -rw-r--r-- 2 boincer umatlas    597962 Feb 27 14:09 input.tar.gz
[2026-02-27 17:39:57] -rw------- 1 boincer umatlas 205964721 Feb 27 17:38 HITS.pool.root.1
[2026-02-27 17:39:57] -rw------- 1 boincer umatlas   2232320 Feb 27 17:39 result.tar.gz
17:39:58 (9872): run_atlas exited; CPU time 95050.386215
17:39:58 (9872): called boinc_finish(0)

</stderr_txt>
]]>

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