Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:40:11 (11941): wrapper (7.7.26015): starting
05:40:11 (11941): wrapper: running run_atlas (--nthreads 8)
[2026-02-28 05:40:11] Arguments: --nthreads 8
[2026-02-28 05:40:11] Threads: 8
[2026-02-28 05:40:11] Checking for CVMFS
[2026-02-28 05:40:11] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-28 05:40:27] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-28 05:40:27] Running cvmfs_config stat atlas.cern.ch
[2026-02-28 05:40:28] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-28 05:40:28] 2.11.2.0 18344 106930 101756 156720 2 49 16040156 25165824 0 130560 86 30291502 99.806 29556873 1487 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://141.99.253.245:3128/ 1
[2026-02-28 05:40:28] CVMFS is ok
[2026-02-28 05:40:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-28 05:40:28] Checking for apptainer binary...
[2026-02-28 05:40:28] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-28 05:40:28] Running /usr/bin/apptainer --version
[2026-02-28 05:40:28] apptainer version 1.3.2-1.el7
[2026-02-28 05:40:28] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-28 05:40:29] cg-vwn430.simple-grid.lan
[2026-02-28 05:40:29] apptainer works
[2026-02-28 05:40:29] Set ATHENA_PROC_NUMBER=8
[2026-02-28 05:40:29] Set ATHENA_CORE_NUMBER=8
[2026-02-28 05:40:29] Starting ATLAS job with PandaID=7031927515
[2026-02-28 05:40:29] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-28 08:14:04]  *** The last 200 lines of the pilot log: ***
[2026-02-28 08:14:04] 2026-02-28 07:13:25,715 | INFO     | added worker_node to metadata from /var/lib/boinc/slots/6/workernode_map.json
[2026-02-28 08:14:04] 2026-02-28 07:13:25,716 | INFO     | this job has now completed (state=finished)
[2026-02-28 08:14:04] 2026-02-28 07:13:25,716 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-28 08:14:04] 2026-02-28 07:13:25,716 | INFO     | log transfer has been attempted: DONE
[2026-02-28 08:14:04] 2026-02-28 07:13:25,716 | INFO     | job 7031927515 has finished - writing final server update
[2026-02-28 08:14:04] 2026-02-28 07:13:25,716 | INFO     | total number of processed events: 400 (read)
[2026-02-28 08:14:04] 2026-02-28 07:13:25,718 | INFO     | using path: /var/lib/boinc/slots/6/PanDA_Pilot-7031927515/memory_monitor_summary.json (trf name=prmon)
[2026-02-28 08:14:04] 2026-02-28 07:13:25,719 | INFO     | extracted standard info from prmon json
[2026-02-28 08:14:04] 2026-02-28 07:13:25,719 | INFO     | extracted standard memory fields from prmon json
[2026-02-28 08:14:04] 2026-02-28 07:13:25,719 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-28 08:14:04] 2026-02-28 07:13:25,720 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-28 08:14:04] 2026-02-28 07:13:25,720 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-28 08:14:04] 2026-02-28 07:13:25,723 | INFO     | fitting pss+swap vs Time
[2026-02-28 08:14:04] 2026-02-28 07:13:25,724 | INFO     | sum of square deviations: 1025693650.0
[2026-02-28 08:14:04] 2026-02-28 07:13:25,725 | INFO     | sum of deviations: 4770404350.000002
[2026-02-28 08:14:04] 2026-02-28 07:13:25,725 | INFO     | mean x: 1772258235.0
[2026-02-28 08:14:04] 2026-02-28 07:13:25,725 | INFO     | mean y: 2538802.0738255032
[2026-02-28 08:14:04] 2026-02-28 07:13:25,725 | INFO     | intersect: -8240066963.855724
[2026-02-28 08:14:04] 2026-02-28 07:13:25,725 | INFO     | chi2: 1.6658832637087044
[2026-02-28 08:14:04] 2026-02-28 07:13:25,726 | INFO     | sum of square deviations: 925859220.0
[2026-02-28 08:14:04] 2026-02-28 07:13:25,727 | INFO     | sum of deviations: 4768137528.999997
[2026-02-28 08:14:04] 2026-02-28 07:13:25,727 | INFO     | mean x: 1772258082.5
[2026-02-28 08:14:04] 2026-02-28 07:13:25,727 | INFO     | mean y: 2538798.597222222
[2026-02-28 08:14:04] 2026-02-28 07:13:25,727 | INFO     | intersect: -9124518632.706236
[2026-02-28 08:14:04] 2026-02-28 07:13:25,727 | INFO     | chi2: 1.6672892598294546
[2026-02-28 08:14:04] 2026-02-28 07:13:25,728 | INFO     | current chi2=1.6672892598294546 (change=-0.08439943850687848 %)
[2026-02-28 08:14:04] 2026-02-28 07:13:25,728 | INFO     | right removable region: 143
[2026-02-28 08:14:04] 2026-02-28 07:13:25,728 | INFO     | sum of square deviations: 925859220.0
[2026-02-28 08:14:04] 2026-02-28 07:13:25,729 | INFO     | sum of deviations: -18474361088.5
[2026-02-28 08:14:04] 2026-02-28 07:13:25,729 | INFO     | mean x: 1772258387.5
[2026-02-28 08:14:04] 2026-02-28 07:13:25,729 | INFO     | mean y: 2573772.8680555555
[2026-02-28 08:14:04] 2026-02-28 07:13:25,730 | INFO     | intersect: 35365770126.62663
[2026-02-28 08:14:04] 2026-02-28 07:13:25,730 | INFO     | chi2: 0.154609259798941
[2026-02-28 08:14:04] 2026-02-28 07:13:25,730 | INFO     | current chi2=0.154609259798941 (change=90.71908199289192 %)
[2026-02-28 08:14:04] 2026-02-28 07:13:25,730 | INFO     | sum of square deviations: 832722590.0
[2026-02-28 08:14:04] 2026-02-28 07:13:25,731 | INFO     | sum of deviations: -19225450215.000004
[2026-02-28 08:14:04] 2026-02-28 07:13:25,731 | INFO     | mean x: 1772258540.0
[2026-02-28 08:14:04] 2026-02-28 07:13:25,732 | INFO     | mean y: 2574913.712230216
[2026-02-28 08:14:04] 2026-02-28 07:13:25,732 | INFO     | intersect: 40919524613.46589
[2026-02-28 08:14:04] 2026-02-28 07:13:25,732 | INFO     | chi2: 0.12795184778483978
[2026-02-28 08:14:04] 2026-02-28 07:13:25,732 | INFO     | current chi2=0.12795184778483978 (change=17.241795251311203 %)
[2026-02-28 08:14:04] 2026-02-28 07:13:25,732 | INFO     | left removable region: 20
[2026-02-28 08:14:04] 2026-02-28 07:13:25,732 | INFO     | sum of square deviations: 576985702.0
[2026-02-28 08:14:04] 2026-02-28 07:13:25,733 | INFO     | sum of deviations: -9805401019.000002
[2026-02-28 08:14:04] 2026-02-28 07:13:25,733 | INFO     | mean x: 1772258662.0
[2026-02-28 08:14:04] 2026-02-28 07:13:25,734 | INFO     | mean y: 2559438.7967479676
[2026-02-28 08:14:04] 2026-02-28 07:13:25,734 | INFO     | intersect: 30120648726.05327
[2026-02-28 08:14:04] 2026-02-28 07:13:25,734 | INFO     | chi2: 0.09891226723411162
[2026-02-28 08:14:04] 2026-02-28 07:13:25,734 | INFO     | current memory leak: -16.99 B/s (using 123 data points, chi2=0.10)
[2026-02-28 08:14:04] 2026-02-28 07:13:25,735 | INFO     | could have reported an average CPU frequency of 1999 MHz (9 samples)
[2026-02-28 08:14:04] 2026-02-28 07:13:25,735 | INFO     | ..............................
[2026-02-28 08:14:04] 2026-02-28 07:13:25,735 | INFO     | . Timing measurements:
[2026-02-28 08:14:04] 2026-02-28 07:13:25,735 | INFO     | . get job = 0 s
[2026-02-28 08:14:04] 2026-02-28 07:13:25,735 | INFO     | . initial setup = 7 s
[2026-02-28 08:14:04] 2026-02-28 07:13:25,735 | INFO     | . payload setup = 8 s
[2026-02-28 08:14:04] 2026-02-28 07:13:25,735 | INFO     | . stage-in = 0 s
[2026-02-28 08:14:04] 2026-02-28 07:13:25,736 | INFO     | . payload execution = 9083 s
[2026-02-28 08:14:04] 2026-02-28 07:13:25,736 | INFO     | . stage-out = 1 s
[2026-02-28 08:14:04] 2026-02-28 07:13:25,736 | INFO     | . log creation = 0 s
[2026-02-28 08:14:04] 2026-02-28 07:13:25,736 | INFO     | ..............................
[2026-02-28 08:14:04] 2026-02-28 07:13:25,856 | INFO     | 
[2026-02-28 08:14:04] 2026-02-28 07:13:25,857 | INFO     | job summary report
[2026-02-28 08:14:04] 2026-02-28 07:13:25,857 | INFO     | --------------------------------------------------
[2026-02-28 08:14:04] 2026-02-28 07:13:25,857 | INFO     | PanDA job id: 7031927515
[2026-02-28 08:14:04] 2026-02-28 07:13:25,857 | INFO     | task id: 48842882
[2026-02-28 08:14:04] 2026-02-28 07:13:25,857 | INFO     | errors: (none)
[2026-02-28 08:14:04] 2026-02-28 07:13:25,857 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-28 08:14:04] 2026-02-28 07:13:25,857 | INFO     | pilot state: finished 
[2026-02-28 08:14:04] 2026-02-28 07:13:25,857 | INFO     | transexitcode: 0
[2026-02-28 08:14:04] 2026-02-28 07:13:25,857 | INFO     | exeerrorcode: 0
[2026-02-28 08:14:04] 2026-02-28 07:13:25,857 | INFO     | exeerrordiag: 
[2026-02-28 08:14:04] 2026-02-28 07:13:25,858 | INFO     | exitcode: 0
[2026-02-28 08:14:04] 2026-02-28 07:13:25,858 | INFO     | exitmsg: OK
[2026-02-28 08:14:04] 2026-02-28 07:13:25,858 | INFO     | cpuconsumptiontime: 68128 s
[2026-02-28 08:14:04] 2026-02-28 07:13:25,858 | INFO     | nevents: 400
[2026-02-28 08:14:04] 2026-02-28 07:13:25,858 | INFO     | neventsw: 0
[2026-02-28 08:14:04] 2026-02-28 07:13:25,858 | INFO     | pid: 20455
[2026-02-28 08:14:04] 2026-02-28 07:13:25,858 | INFO     | pgrp: 20455
[2026-02-28 08:14:04] 2026-02-28 07:13:25,858 | INFO     | corecount: 8
[2026-02-28 08:14:04] 2026-02-28 07:13:25,858 | INFO     | event service: False
[2026-02-28 08:14:04] 2026-02-28 07:13:25,858 | INFO     | sizes: {0: 2281892, 1: 2282353, 9096: 2310627, 9098: 2319625, 9101: 2319939}
[2026-02-28 08:14:04] 2026-02-28 07:13:25,858 | INFO     | --------------------------------------------------
[2026-02-28 08:14:04] 2026-02-28 07:13:25,859 | INFO     | 
[2026-02-28 08:14:04] 2026-02-28 07:13:25,859 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2026-02-28 08:14:04] 2026-02-28 07:13:25,880 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-28 08:14:04] 2026-02-28 07:13:25,880 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-28 08:14:04] 2026-02-28 07:13:25,880 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-28 08:14:04] 2026-02-28 07:13:25,881 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-28 08:14:04] 2026-02-28 07:13:25,881 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-28 08:14:04] 2026-02-28 07:13:25,881 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-28 08:14:04] 2026-02-28 07:13:25,881 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-28 08:14:04] 2026-02-28 07:13:25,881 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-28 08:14:04] 2026-02-28 07:13:25,881 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-28 08:14:04] 2026-02-28 07:13:25,881 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-28 08:14:04] 2026-02-28 07:13:25,881 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-28 08:14:04] 2026-02-28 07:13:25,882 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-28 08:14:04] 2026-02-28 07:13:25,882 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-28 08:14:04] 2026-02-28 07:13:25,882 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-28 08:14:04] 2026-02-28 07:13:25,882 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-28 08:14:04] 2026-02-28 07:13:25,882 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-28 08:14:04] 2026-02-28 07:13:25,882 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-28 08:14:04] 2026-02-28 07:13:25,882 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-28 08:14:04] 2026-02-28 07:13:25,882 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-28 08:14:04] 2026-02-28 07:13:25,882 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-28 08:14:04] 2026-02-28 07:13:25,883 | INFO     | job 7031927515 has completed (purged errors)
[2026-02-28 08:14:04] 2026-02-28 07:13:25,883 | INFO     | overall cleanup function is called
[2026-02-28 08:14:04] 2026-02-28 07:13:26,890 | INFO     | --- collectZombieJob: --- 10, [20455]
[2026-02-28 08:14:04] 2026-02-28 07:13:26,891 | INFO     | zombie collector waiting for pid 20455
[2026-02-28 08:14:04] 2026-02-28 07:13:26,891 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-28 08:14:04] 2026-02-28 07:13:26,891 | INFO     | collected zombie processes
[2026-02-28 08:14:04] 2026-02-28 07:13:26,891 | INFO     | will attempt to kill all subprocesses of pid=20455
[2026-02-28 08:14:04] 2026-02-28 07:13:26,951 | INFO     | process IDs to be killed: [20455] (in reverse order)
[2026-02-28 08:14:04] 2026-02-28 07:13:26,997 | WARNING  | found no corresponding commands to process id(s)
[2026-02-28 08:14:04] 2026-02-28 07:13:26,998 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-28 08:14:04] 2026-02-28 07:13:27,000 | INFO     | did not find any defunct processes belonging to 20455
[2026-02-28 08:14:04] 2026-02-28 07:13:27,001 | INFO     | did not find any defunct processes belonging to 20455
[2026-02-28 08:14:04] 2026-02-28 07:13:27,001 | INFO     | ready for new job
[2026-02-28 08:14:04] 2026-02-28 07:13:27,001 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-28 08:14:04] 2026-02-28 07:13:27,003 | INFO     | **************************************
[2026-02-28 08:14:04] 2026-02-28 07:13:27,003 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-28 08:14:04] 2026-02-28 07:13:27,003 | INFO     | **************************************
[2026-02-28 08:14:04] 2026-02-28 07:13:27,003 | INFO     | 
[2026-02-28 08:14:04] 2026-02-28 07:13:27,004 | INFO     | pilot is running in a VM
[2026-02-28 08:14:04] 2026-02-28 07:13:27,004 | INFO     | architecture information:
[2026-02-28 08:14:04] 2026-02-28 07:13:27,005 | INFO     | executing command: cat /etc/os-release
[2026-02-28 08:14:04] 2026-02-28 07:13:27,022 | INFO     | cat /etc/os-release:
[2026-02-28 08:14:04] NAME="CentOS Linux"
[2026-02-28 08:14:04] VERSION="7 (Core)"
[2026-02-28 08:14:04] ID="centos"
[2026-02-28 08:14:04] ID_LIKE="rhel fedora"
[2026-02-28 08:14:04] VERSION_ID="7"
[2026-02-28 08:14:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-28 08:14:04] ANSI_COLOR="0;31"
[2026-02-28 08:14:04] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-28 08:14:04] HOME_URL="https://www.centos.org/"
[2026-02-28 08:14:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-28 08:14:04] 
[2026-02-28 08:14:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-28 08:14:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-28 08:14:04] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-28 08:14:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-28 08:14:04] 
[2026-02-28 08:14:04] 2026-02-28 07:13:27,022 | INFO     | **************************************
[2026-02-28 08:14:04] 2026-02-28 07:13:27,218 | WARNING  | process 20455 can no longer be monitored (due to stat problems) - aborting
[2026-02-28 08:14:04] 2026-02-28 07:13:27,263 | INFO     | using path: /var/lib/boinc/slots/6/memory_monitor_summary.json (trf name=prmon)
[2026-02-28 08:14:04] 2026-02-28 07:13:27,320 | INFO     | number of running child processes to parent process 20455: 1
[2026-02-28 08:14:04] 2026-02-28 07:13:27,320 | INFO     | maximum number of monitored processes: 6
[2026-02-28 08:14:04] 2026-02-28 07:13:27,320 | INFO     | aborting job monitoring since job object (job id=7031927515) has expired
[2026-02-28 08:14:04] 2026-02-28 07:13:27,525 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2026-02-28 08:14:04] 2026-02-28 07:13:27,550 | INFO     | sufficient remaining disk space (497729667072 B)
[2026-02-28 08:14:04] 2026-02-28 07:13:27,551 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-28 08:14:04] 2026-02-28 07:13:27,551 | INFO     | current server update state: UPDATING_FINAL
[2026-02-28 08:14:04] 2026-02-28 07:13:27,551 | INFO     | update_server=False
[2026-02-28 08:14:04] 2026-02-28 07:13:27,551 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-28 08:14:04] 2026-02-28 07:13:27,552 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-28 08:14:04] 2026-02-28 07:13:27,552 | INFO     | will abort loop
[2026-02-28 08:14:04] 2026-02-28 07:13:27,552 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-28 08:14:04] 2026-02-28 07:13:27,553 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-28 08:14:04] 2026-02-28 07:13:27,689 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-28 08:14:04] 2026-02-28 07:13:27,826 | INFO     | all data control threads have been joined
[2026-02-28 08:14:04] 2026-02-28 07:13:28,429 | INFO     | all payload control threads have been joined
[2026-02-28 08:14:04] 2026-02-28 07:13:28,557 | INFO     | [job] retrieve thread has finished
[2026-02-28 08:14:04] 2026-02-28 07:13:28,557 | INFO     | [job] job monitor thread has finished
[2026-02-28 08:14:04] 2026-02-28 07:13:28,559 | INFO     | [job] queue monitor thread has finished
[2026-02-28 08:14:04] 2026-02-28 07:13:28,832 | INFO     | [data] control thread has finished
[2026-02-28 08:14:04] 2026-02-28 07:13:29,004 | INFO     | [payload] failed_post thread has finished
[2026-02-28 08:14:04] 2026-02-28 07:13:29,182 | INFO     | [payload] execute_payloads thread has finished
[2026-02-28 08:14:04] 2026-02-28 07:13:29,223 | INFO     | all job control threads have been joined
[2026-02-28 08:14:04] 2026-02-28 07:13:29,435 | INFO     | [payload] control thread has finished
[2026-02-28 08:14:04] 2026-02-28 07:13:29,484 | INFO     | [payload] validate_pre thread has finished
[2026-02-28 08:14:04] 2026-02-28 07:13:29,591 | INFO     | [job] validate thread has finished
[2026-02-28 08:14:04] 2026-02-28 07:13:29,695 | INFO     | [data] copytool_out thread has finished
[2026-02-28 08:14:04] 2026-02-28 07:13:29,775 | INFO     | [data] copytool_in thread has finished
[2026-02-28 08:14:04] 2026-02-28 07:13:29,832 | INFO     | [job] create_data_payload thread has finished
[2026-02-28 08:14:04] 2026-02-28 07:13:29,908 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-28 08:14:04] 2026-02-28 07:13:30,092 | INFO     | [payload] validate_post thread has finished
[2026-02-28 08:14:04] 2026-02-28 07:13:30,228 | INFO     | [job] control thread has finished
[2026-02-28 08:14:04] 2026-02-28 07:13:31,561 | INFO     | [data] queue_monitor thread has finished
[2026-02-28 08:14:04] 2026-02-28 07:13:57,916 | INFO     | [monitor] cgroup control has ended
[2026-02-28 08:14:04] 2026-02-28 07:13:58,180 | INFO     | PID=16003 has CPU usage=4.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-02-28 08:14:04] 2026-02-28 07:13:58,181 | INFO     | found 0 job(s) in 20 queues
[2026-02-28 08:14:04] 2026-02-28 07:13:58,182 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-28 08:14:04] 2026-02-28 07:13:58,182 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-28 08:14:04] 2026-02-28 07:13:58,818 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139734033340224)>', '<ExcThread(monitor, started 139733598463744)>']
[2026-02-28 08:14:04] 2026-02-28 07:13:59,187 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-28 08:14:04] 2026-02-28 07:13:59,187 | INFO     | [monitor] control thread has ended
[2026-02-28 08:14:04] 2026-02-28 07:14:03,824 | INFO     | all workflow threads have been joined
[2026-02-28 08:14:04] 2026-02-28 07:14:03,824 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-28 08:14:04] 2026-02-28 07:14:03,824 | INFO     | traces error code: 0
[2026-02-28 08:14:04] 2026-02-28 07:14:03,824 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-28 08:14:04] 2026-02-28 07:14:03,952 [wrapper] ==== pilot stdout END ====
[2026-02-28 08:14:04] 2026-02-28 07:14:03,956 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-28 08:14:04] 2026-02-28 07:14:03,960 [wrapper] pilotpid: 16003
[2026-02-28 08:14:04] 2026-02-28 07:14:03,964 [wrapper] Pilot exit status: 0
[2026-02-28 08:14:04] 2026-02-28 07:14:03,979 [wrapper] pandaids: 7031927515
[2026-02-28 08:14:04] 2026-02-28 07:14:04,009 [wrapper] cleanup supervisor_pilot 25825 16004
[2026-02-28 08:14:04] 2026-02-28 07:14:04,015 [wrapper] Test setup, not cleaning
[2026-02-28 08:14:04] 2026-02-28 07:14:04,024 [wrapper] apfmon messages muted
[2026-02-28 08:14:04] 2026-02-28 07:14:04,027 [wrapper] ==== wrapper stdout END ====
[2026-02-28 08:14:04] 2026-02-28 07:14:04,030 [wrapper] ==== wrapper stderr END ====
[2026-02-28 08:14:04]  *** Error codes and diagnostics ***
[2026-02-28 08:14:04]     "exeErrorCode": 0,
[2026-02-28 08:14:04]     "exeErrorDiag": "",
[2026-02-28 08:14:04]     "pilotErrorCode": 0,
[2026-02-28 08:14:04]     "pilotErrorDiag": "",
[2026-02-28 08:14:04]  *** Listing of results directory ***
[2026-02-28 08:14:04] total 482788
[2026-02-28 08:14:04] -rw-r--r--. 1 boinc boinc    584627 Feb 27 19:17 pilot3.tar.gz
[2026-02-28 08:14:04] -rwx------. 1 boinc boinc     36322 Feb 27 19:17 runpilot2-wrapper.sh
[2026-02-28 08:14:04] -rw-r--r--. 1 boinc boinc      5111 Feb 27 19:19 queuedata.json
[2026-02-28 08:14:04] -rw-r--r--. 1 boinc boinc       100 Feb 28 05:40 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-28 08:14:04] -rwxr-xr-x. 1 boinc boinc      7986 Feb 28 05:40 run_atlas
[2026-02-28 08:14:04] -rw-r--r--. 1 boinc boinc       105 Feb 28 05:40 job.xml
[2026-02-28 08:14:04] -rw-r--r--. 2 boinc boinc 274705429 Feb 28 05:40 EVNT.48449560._000001.pool.root.1
[2026-02-28 08:14:04] -rw-r--r--. 2 boinc boinc     15845 Feb 28 05:40 start_atlas.sh
[2026-02-28 08:14:04] drwxrwx--x. 2 boinc boinc        68 Feb 28 05:40 shared
[2026-02-28 08:14:04] -rw-r--r--. 2 boinc boinc    597957 Feb 28 05:40 input.tar.gz
[2026-02-28 08:14:04] -rw-r--r--. 1 boinc boinc      6390 Feb 28 05:40 init_data.xml
[2026-02-28 08:14:04] -rw-r--r--. 1 boinc boinc         0 Feb 28 05:40 boinc_lockfile
[2026-02-28 08:14:04] -rw-r--r--. 1 boinc boinc      2602 Feb 28 05:40 pandaJob.out
[2026-02-28 08:14:04] -rw-------. 1 boinc boinc    998782 Feb 28 05:41 agis_schedconf.cvmfs.json
[2026-02-28 08:14:04] -rw-------. 1 boinc boinc   1513015 Feb 28 05:41 agis_ddmendpoints.agis.ALL.json
[2026-02-28 08:14:04] -rw-------. 1 boinc boinc       415 Feb 28 05:41 workernode_map.json
[2026-02-28 08:14:04] drwx------. 5 boinc boinc      4096 Feb 28 05:41 pilot3
[2026-02-28 08:14:04] -rw-------. 1 boinc boinc 212453199 Feb 28 08:12 HITS.48842882._000004.pool.root.1
[2026-02-28 08:14:04] -rw-r--r--. 1 boinc boinc       529 Feb 28 08:12 boinc_task_state.xml
[2026-02-28 08:14:04] -rw-------. 1 boinc boinc      1011 Feb 28 08:13 memory_monitor_summary.json
[2026-02-28 08:14:04] -rw-------. 1 boinc boinc    376259 Feb 28 08:13 log.48842882._000004.job.log.tgz.1
[2026-02-28 08:14:04] -rw-------. 1 boinc boinc      6291 Feb 28 08:13 heartbeat.json
[2026-02-28 08:14:04] -rw-------. 1 boinc boinc        95 Feb 28 08:13 pilot_heartbeat.json
[2026-02-28 08:14:04] -rw-r--r--. 1 boinc boinc      8192 Feb 28 08:14 boinc_mmap_file
[2026-02-28 08:14:04] -rw-r--r--. 1 boinc boinc        27 Feb 28 08:14 wrapper_checkpoint.txt
[2026-02-28 08:14:04] -rw-------. 1 boinc boinc      5322 Feb 28 08:14 pilotlog.txt
[2026-02-28 08:14:04] -rw-------. 1 boinc boinc   1275970 Feb 28 08:14 log.48842882._000004.job.log.1
[2026-02-28 08:14:04] -rw-------. 1 boinc boinc       357 Feb 28 08:14 output.list
[2026-02-28 08:14:04] -rw-r--r--. 1 boinc boinc       620 Feb 28 08:14 runtime_log
[2026-02-28 08:14:04] -rw-------. 1 boinc boinc   1669120 Feb 28 08:14 result.tar.gz
[2026-02-28 08:14:04] -rw-r--r--. 1 boinc boinc      8815 Feb 28 08:14 runtime_log.err
[2026-02-28 08:14:04] -rw-------. 1 boinc boinc       652 Feb 28 08:14 EWeMDmQaHG9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmbW5KDmLca9Um.diag
[2026-02-28 08:14:04] -rw-r--r--. 1 boinc boinc     20916 Feb 28 08:14 stderr.txt
[2026-02-28 08:14:04] HITS file was successfully produced:
[2026-02-28 08:14:04] -rw-------. 1 boinc boinc 212453199 Feb 28 08:12 shared/HITS.pool.root.1
[2026-02-28 08:14:04]  *** Contents of shared directory: ***
[2026-02-28 08:14:04] total 477976
[2026-02-28 08:14:04] -rw-r--r--. 2 boinc boinc 274705429 Feb 28 05:40 ATLAS.root_0
[2026-02-28 08:14:04] -rw-r--r--. 2 boinc boinc     15845 Feb 28 05:40 start_atlas.sh
[2026-02-28 08:14:04] -rw-r--r--. 2 boinc boinc    597957 Feb 28 05:40 input.tar.gz
[2026-02-28 08:14:04] -rw-------. 1 boinc boinc 212453199 Feb 28 08:12 HITS.pool.root.1
[2026-02-28 08:14:04] -rw-------. 1 boinc boinc   1669120 Feb 28 08:14 result.tar.gz
08:14:05 (11941): run_atlas exited; CPU time 68180.525324
08:14:05 (11941): called boinc_finish(0)

</stderr_txt>
]]>

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