Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
00:05:29 (1054601): wrapper (7.7.26015): starting
00:05:29 (1054601): wrapper: running run_atlas (--nthreads 4)
[2026-02-28 00:05:29] Arguments: --nthreads 4
[2026-02-28 00:05:29] Threads: 4
[2026-02-28 00:05:29] Checking for CVMFS
[2026-02-28 00:05:29] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-28 00:05:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-28 00:05:29] Running cvmfs_config stat atlas.cern.ch
[2026-02-28 00:05:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-28 00:05:30] 2.13.1.0 3543774 3477 101444 156710 0 188 7672315 10240001 1822 130560 0 3696913 99.992 147589 659 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.101.101:3128 1
[2026-02-28 00:05:30] CVMFS is ok
[2026-02-28 00:05:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-28 00:05:30] Checking for apptainer binary...
[2026-02-28 00:05:30] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-28 00:05:30] Running /usr/bin/apptainer --version
[2026-02-28 00:05:30] apptainer version 1.4.5
[2026-02-28 00:05:30] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-28 00:05:30] ellievl
[2026-02-28 00:05:30] apptainer works
[2026-02-28 00:05:30] Set ATHENA_PROC_NUMBER=4
[2026-02-28 00:05:30] Set ATHENA_CORE_NUMBER=4
[2026-02-28 00:05:30] Starting ATLAS job with PandaID=7031564472
[2026-02-28 00:05:30] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc_data/boinc-01/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-28 03:22:23]  *** The last 200 lines of the pilot log: ***
[2026-02-28 03:22:23] 2026-02-28 02:22:07,351 | INFO     | sum of square deviations: 2229146912.0
[2026-02-28 03:22:23] 2026-02-28 02:22:07,351 | INFO     | sum of deviations: 31644679884.0
[2026-02-28 03:22:23] 2026-02-28 02:22:07,351 | INFO     | mean x: 1772239442.0
[2026-02-28 03:22:23] 2026-02-28 02:22:07,351 | INFO     | mean y: 2321046.792746114
[2026-02-28 03:22:23] 2026-02-28 02:22:07,351 | INFO     | intersect: -25156159768.44066
[2026-02-28 03:22:23] 2026-02-28 02:22:07,352 | INFO     | chi2: 1.4796422313825268
[2026-02-28 03:22:23] 2026-02-28 02:22:07,352 | INFO     | sum of square deviations: 2060343747.0
[2026-02-28 03:22:23] 2026-02-28 02:22:07,352 | INFO     | sum of deviations: 30656173633.499996
[2026-02-28 03:22:23] 2026-02-28 02:22:07,352 | INFO     | mean x: 1772239289.5
[2026-02-28 03:22:23] 2026-02-28 02:22:07,352 | INFO     | mean y: 2320154.2180851065
[2026-02-28 03:22:23] 2026-02-28 02:22:07,353 | INFO     | intersect: -26367102646.288353
[2026-02-28 03:22:23] 2026-02-28 02:22:07,353 | INFO     | chi2: 1.480424547932182
[2026-02-28 03:22:23] 2026-02-28 02:22:07,353 | INFO     | current chi2=1.480424547932182 (change=-0.05287200737196083 %)
[2026-02-28 03:22:23] 2026-02-28 02:22:07,353 | INFO     | right removable region: 187
[2026-02-28 03:22:23] 2026-02-28 02:22:07,353 | INFO     | sum of square deviations: 2060343747.0
[2026-02-28 03:22:23] 2026-02-28 02:22:07,354 | INFO     | sum of deviations: 2580576147.0000005
[2026-02-28 03:22:23] 2026-02-28 02:22:07,354 | INFO     | mean x: 1772239594.5
[2026-02-28 03:22:23] 2026-02-28 02:22:07,354 | INFO     | mean y: 2347024.0212765955
[2026-02-28 03:22:23] 2026-02-28 02:22:07,354 | INFO     | intersect: -2217379286.6949973
[2026-02-28 03:22:23] 2026-02-28 02:22:07,354 | INFO     | chi2: 0.013101312488209898
[2026-02-28 03:22:23] 2026-02-28 02:22:07,354 | INFO     | current chi2=0.013101312488209898 (change=99.11456214141924 %)
[2026-02-28 03:22:23] 2026-02-28 02:22:07,355 | INFO     | sum of square deviations: 1900284932.0
[2026-02-28 03:22:23] 2026-02-28 02:22:07,355 | INFO     | sum of deviations: 3869976761.9999995
[2026-02-28 03:22:23] 2026-02-28 02:22:07,355 | INFO     | mean x: 1772239747.0
[2026-02-28 03:22:23] 2026-02-28 02:22:07,355 | INFO     | mean y: 2345772.9945355193
[2026-02-28 03:22:23] 2026-02-28 02:22:07,356 | INFO     | intersect: -3606863836.621397
[2026-02-28 03:22:23] 2026-02-28 02:22:07,356 | INFO     | chi2: 0.00605463940200712
[2026-02-28 03:22:23] 2026-02-28 02:22:07,356 | INFO     | current chi2=0.00605463940200712 (change=53.78600878762493 %)
[2026-02-28 03:22:23] 2026-02-28 02:22:07,356 | INFO     | sum of square deviations: 1748737904.5
[2026-02-28 03:22:23] 2026-02-28 02:22:07,356 | INFO     | sum of deviations: 4451954124.500001
[2026-02-28 03:22:23] 2026-02-28 02:22:07,356 | INFO     | mean x: 1772239899.5
[2026-02-28 03:22:23] 2026-02-28 02:22:07,357 | INFO     | mean y: 2345213.241573034
[2026-02-28 03:22:23] 2026-02-28 02:22:07,357 | INFO     | intersect: -4509440520.8466835
[2026-02-28 03:22:23] 2026-02-28 02:22:07,357 | INFO     | chi2: 0.0004443834153920488
[2026-02-28 03:22:23] 2026-02-28 02:22:07,357 | INFO     | current chi2=0.0004443834153920488 (change=92.66044786672622 %)
[2026-02-28 03:22:23] 2026-02-28 02:22:07,357 | INFO     | sum of square deviations: 1605470102.0
[2026-02-28 03:22:23] 2026-02-28 02:22:07,358 | INFO     | sum of deviations: 3937168018.000002
[2026-02-28 03:22:23] 2026-02-28 02:22:07,358 | INFO     | mean x: 1772240052.0
[2026-02-28 03:22:23] 2026-02-28 02:22:07,358 | INFO     | mean y: 2345761.1791907516
[2026-02-28 03:22:23] 2026-02-28 02:22:07,358 | INFO     | intersect: -4343799859.508961
[2026-02-28 03:22:23] 2026-02-28 02:22:07,358 | INFO     | chi2: 0.00041281345767688727
[2026-02-28 03:22:23] 2026-02-28 02:22:07,358 | INFO     | current chi2=0.00041281345767688727 (change=7.104216003945496 %)
[2026-02-28 03:22:23] 2026-02-28 02:22:07,358 | INFO     | left removable region: 40
[2026-02-28 03:22:23] 2026-02-28 02:22:07,359 | INFO     | sum of square deviations: 984941258.0
[2026-02-28 03:22:23] 2026-02-28 02:22:07,359 | INFO     | sum of deviations: 2188253366.0
[2026-02-28 03:22:23] 2026-02-28 02:22:07,359 | INFO     | mean x: 1772240479.0
[2026-02-28 03:22:23] 2026-02-28 02:22:07,359 | INFO     | mean y: 2347394.768707483
[2026-02-28 03:22:23] 2026-02-28 02:22:07,359 | INFO     | intersect: -3935056142.7864256
[2026-02-28 03:22:23] 2026-02-28 02:22:07,360 | INFO     | chi2: 0.0002694852021159803
[2026-02-28 03:22:23] 2026-02-28 02:22:07,360 | INFO     | current memory leak: 2.22 B/s (using 147 data points, chi2=0.00)
[2026-02-28 03:22:23] 2026-02-28 02:22:07,360 | INFO     | could have reported an average CPU frequency of 3700 MHz (10 samples)
[2026-02-28 03:22:23] 2026-02-28 02:22:07,360 | INFO     | ..............................
[2026-02-28 03:22:23] 2026-02-28 02:22:07,360 | INFO     | . Timing measurements:
[2026-02-28 03:22:23] 2026-02-28 02:22:07,361 | INFO     | . get job = 0 s
[2026-02-28 03:22:23] 2026-02-28 02:22:07,361 | INFO     | . initial setup = 8 s
[2026-02-28 03:22:23] 2026-02-28 02:22:07,361 | INFO     | . payload setup = 10 s
[2026-02-28 03:22:23] 2026-02-28 02:22:07,361 | INFO     | . stage-in = 0 s
[2026-02-28 03:22:23] 2026-02-28 02:22:07,361 | INFO     | . payload execution = 11743 s
[2026-02-28 03:22:23] 2026-02-28 02:22:07,361 | INFO     | . stage-out = 0 s
[2026-02-28 03:22:23] 2026-02-28 02:22:07,361 | INFO     | . log creation = 0 s
[2026-02-28 03:22:23] 2026-02-28 02:22:07,361 | INFO     | ..............................
[2026-02-28 03:22:23] 2026-02-28 02:22:07,398 | INFO     | number of running child processes to parent process 1063205: 1
[2026-02-28 03:22:23] 2026-02-28 02:22:07,398 | INFO     | maximum number of monitored processes: 6
[2026-02-28 03:22:23] 2026-02-28 02:22:07,398 | INFO     | aborting job monitoring since job object (job id=7031564472) has expired
[2026-02-28 03:22:23] 2026-02-28 02:22:07,418 | INFO     | 
[2026-02-28 03:22:23] 2026-02-28 02:22:07,418 | INFO     | job summary report
[2026-02-28 03:22:23] 2026-02-28 02:22:07,418 | INFO     | --------------------------------------------------
[2026-02-28 03:22:23] 2026-02-28 02:22:07,418 | INFO     | PanDA job id: 7031564472
[2026-02-28 03:22:23] 2026-02-28 02:22:07,418 | INFO     | task id: 48843097
[2026-02-28 03:22:23] 2026-02-28 02:22:07,418 | INFO     | errors: (none)
[2026-02-28 03:22:23] 2026-02-28 02:22:07,418 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-28 03:22:23] 2026-02-28 02:22:07,419 | INFO     | pilot state: finished 
[2026-02-28 03:22:23] 2026-02-28 02:22:07,419 | INFO     | transexitcode: 0
[2026-02-28 03:22:23] 2026-02-28 02:22:07,419 | INFO     | exeerrorcode: 0
[2026-02-28 03:22:23] 2026-02-28 02:22:07,419 | INFO     | exeerrordiag: 
[2026-02-28 03:22:23] 2026-02-28 02:22:07,419 | INFO     | exitcode: 0
[2026-02-28 03:22:23] 2026-02-28 02:22:07,419 | INFO     | exitmsg: OK
[2026-02-28 03:22:23] 2026-02-28 02:22:07,419 | INFO     | cpuconsumptiontime: 45604 s
[2026-02-28 03:22:23] 2026-02-28 02:22:07,419 | INFO     | nevents: 400
[2026-02-28 03:22:23] 2026-02-28 02:22:07,419 | INFO     | neventsw: 0
[2026-02-28 03:22:23] 2026-02-28 02:22:07,419 | INFO     | pid: 1063205
[2026-02-28 03:22:23] 2026-02-28 02:22:07,419 | INFO     | pgrp: 1063205
[2026-02-28 03:22:23] 2026-02-28 02:22:07,419 | INFO     | corecount: 4
[2026-02-28 03:22:23] 2026-02-28 02:22:07,419 | INFO     | event service: False
[2026-02-28 03:22:23] 2026-02-28 02:22:07,419 | INFO     | sizes: {0: 2282358, 11: 2282358, 11756: 2311754, 11757: 2320780, 11758: 2320836, 11759: 2321030}
[2026-02-28 03:22:23] 2026-02-28 02:22:07,419 | INFO     | --------------------------------------------------
[2026-02-28 03:22:23] 2026-02-28 02:22:07,419 | INFO     | 
[2026-02-28 03:22:23] 2026-02-28 02:22:07,419 | INFO     | executing command: ls -lF /var/lib/boinc_data/boinc-01/slots/0
[2026-02-28 03:22:23] 2026-02-28 02:22:07,431 | INFO     | time since job start (11770s) is within the limit (349056.0s)
[2026-02-28 03:22:23] 2026-02-28 02:22:07,446 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-28 03:22:23] 2026-02-28 02:22:07,446 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-28 03:22:23] 2026-02-28 02:22:07,446 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-28 03:22:23] 2026-02-28 02:22:07,446 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-28 03:22:23] 2026-02-28 02:22:07,446 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-28 03:22:23] 2026-02-28 02:22:07,446 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-28 03:22:23] 2026-02-28 02:22:07,447 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-28 03:22:23] 2026-02-28 02:22:07,447 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-28 03:22:23] 2026-02-28 02:22:07,447 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-28 03:22:23] 2026-02-28 02:22:07,447 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-28 03:22:23] 2026-02-28 02:22:07,447 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-28 03:22:23] 2026-02-28 02:22:07,447 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-28 03:22:23] 2026-02-28 02:22:07,447 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-28 03:22:23] 2026-02-28 02:22:07,447 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-28 03:22:23] 2026-02-28 02:22:07,447 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-28 03:22:23] 2026-02-28 02:22:07,447 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-28 03:22:23] 2026-02-28 02:22:07,447 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-28 03:22:23] 2026-02-28 02:22:07,447 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-28 03:22:23] 2026-02-28 02:22:07,447 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-28 03:22:23] 2026-02-28 02:22:07,447 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-28 03:22:23] 2026-02-28 02:22:07,448 | INFO     | job 7031564472 has completed (purged errors)
[2026-02-28 03:22:23] 2026-02-28 02:22:07,448 | INFO     | overall cleanup function is called
[2026-02-28 03:22:23] 2026-02-28 02:22:08,456 | INFO     | --- collectZombieJob: --- 10, [1063205]
[2026-02-28 03:22:23] 2026-02-28 02:22:08,456 | INFO     | zombie collector waiting for pid 1063205
[2026-02-28 03:22:23] 2026-02-28 02:22:08,456 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-28 03:22:23] 2026-02-28 02:22:08,456 | INFO     | collected zombie processes
[2026-02-28 03:22:23] 2026-02-28 02:22:08,456 | INFO     | will attempt to kill all subprocesses of pid=1063205
[2026-02-28 03:22:23] 2026-02-28 02:22:08,671 | INFO     | process IDs to be killed: [1063205] (in reverse order)
[2026-02-28 03:22:23] 2026-02-28 02:22:08,765 | WARNING  | found no corresponding commands to process id(s)
[2026-02-28 03:22:23] 2026-02-28 02:22:08,765 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-28 03:22:23] 2026-02-28 02:22:08,770 | INFO     | did not find any defunct processes belonging to 1063205
[2026-02-28 03:22:23] 2026-02-28 02:22:08,775 | INFO     | did not find any defunct processes belonging to 1063205
[2026-02-28 03:22:23] 2026-02-28 02:22:08,775 | INFO     | ready for new job
[2026-02-28 03:22:23] 2026-02-28 02:22:08,776 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-28 03:22:23] 2026-02-28 02:22:08,778 | INFO     | **************************************
[2026-02-28 03:22:23] 2026-02-28 02:22:08,779 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-28 03:22:23] 2026-02-28 02:22:08,779 | INFO     | **************************************
[2026-02-28 03:22:23] 2026-02-28 02:22:08,779 | INFO     | 
[2026-02-28 03:22:23] 2026-02-28 02:22:08,779 | INFO     | pilot is running in a VM
[2026-02-28 03:22:23] 2026-02-28 02:22:08,779 | INFO     | architecture information:
[2026-02-28 03:22:23] 2026-02-28 02:22:08,780 | INFO     | executing command: cat /etc/os-release
[2026-02-28 03:22:23] 2026-02-28 02:22:08,802 | INFO     | cat /etc/os-release:
[2026-02-28 03:22:23] NAME="CentOS Linux"
[2026-02-28 03:22:23] VERSION="7 (Core)"
[2026-02-28 03:22:23] ID="centos"
[2026-02-28 03:22:23] ID_LIKE="rhel fedora"
[2026-02-28 03:22:23] VERSION_ID="7"
[2026-02-28 03:22:23] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-28 03:22:23] ANSI_COLOR="0;31"
[2026-02-28 03:22:23] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-28 03:22:23] HOME_URL="https://www.centos.org/"
[2026-02-28 03:22:23] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-28 03:22:23] 
[2026-02-28 03:22:23] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-28 03:22:23] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-28 03:22:23] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-28 03:22:23] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-28 03:22:23] 
[2026-02-28 03:22:23] 2026-02-28 02:22:08,803 | INFO     | **************************************
[2026-02-28 03:22:23] 2026-02-28 02:22:09,307 | INFO     | executing command: df -mP /var/lib/boinc_data/boinc-01/slots/0
[2026-02-28 03:22:23] 2026-02-28 02:22:09,326 | INFO     | sufficient remaining disk space (52133101568 B)
[2026-02-28 03:22:23] 2026-02-28 02:22:09,326 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-28 03:22:23] 2026-02-28 02:22:09,326 | INFO     | current server update state: UPDATING_FINAL
[2026-02-28 03:22:23] 2026-02-28 02:22:09,327 | INFO     | update_server=False
[2026-02-28 03:22:23] 2026-02-28 02:22:09,327 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-28 03:22:23] 2026-02-28 02:22:09,327 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-28 03:22:23] 2026-02-28 02:22:09,328 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-28 03:22:23] 2026-02-28 02:22:09,328 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-28 03:22:23] 2026-02-28 02:22:09,329 | INFO     | aborting loop
[2026-02-28 03:22:23] 2026-02-28 02:22:09,328 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-02-28 03:22:23] 2026-02-28 02:22:09,329 | INFO     | found 0 job(s) in 20 queues
[2026-02-28 03:22:23] 2026-02-28 02:22:09,329 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-28 03:22:23] 2026-02-28 02:22:09,329 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-28 03:22:23] 2026-02-28 02:22:09,422 | INFO     | all data control threads have been joined
[2026-02-28 03:22:23] 2026-02-28 02:22:10,194 | INFO     | all job control threads have been joined
[2026-02-28 03:22:23] 2026-02-28 02:22:10,333 | INFO     | [job] retrieve thread has finished
[2026-02-28 03:22:23] 2026-02-28 02:22:10,334 | INFO     | [job] queue monitor thread has finished
[2026-02-28 03:22:23] 2026-02-28 02:22:10,335 | INFO     | [job] job monitor thread has finished
[2026-02-28 03:22:23] 2026-02-28 02:22:10,428 | INFO     | [data] control thread has finished
[2026-02-28 03:22:23] 2026-02-28 02:22:10,486 | INFO     | [payload] execute_payloads thread has finished
[2026-02-28 03:22:23] 2026-02-28 02:22:10,558 | INFO     | [data] copytool_in thread has finished
[2026-02-28 03:22:23] 2026-02-28 02:22:10,801 | INFO     | all payload control threads have been joined
[2026-02-28 03:22:23] 2026-02-28 02:22:10,853 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-28 03:22:23] 2026-02-28 02:22:10,921 | INFO     | [payload] validate_post thread has finished
[2026-02-28 03:22:23] 2026-02-28 02:22:11,200 | INFO     | [job] control thread has finished
[2026-02-28 03:22:23] 2026-02-28 02:22:11,333 | INFO     | [data] copytool_out thread has finished
[2026-02-28 03:22:23] 2026-02-28 02:22:11,510 | INFO     | [job] validate thread has finished
[2026-02-28 03:22:23] 2026-02-28 02:22:11,521 | INFO     | [job] create_data_payload thread has finished
[2026-02-28 03:22:23] 2026-02-28 02:22:11,761 | INFO     | [payload] validate_pre thread has finished
[2026-02-28 03:22:23] 2026-02-28 02:22:11,807 | INFO     | [payload] control thread has finished
[2026-02-28 03:22:23] 2026-02-28 02:22:11,928 | INFO     | [payload] failed_post thread has finished
[2026-02-28 03:22:23] 2026-02-28 02:22:12,359 | INFO     | [monitor] cgroup control has ended
[2026-02-28 03:22:23] 2026-02-28 02:22:12,528 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-28 03:22:23] 2026-02-28 02:22:16,535 | INFO     | [data] queue_monitor thread has finished
[2026-02-28 03:22:23] 2026-02-28 02:22:17,756 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 130961919182656)>', '<ExcThread(monitor, started 130961119368960)>']
[2026-02-28 03:22:23] 2026-02-28 02:22:18,377 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-28 03:22:23] 2026-02-28 02:22:18,377 | INFO     | [monitor] control thread has ended
[2026-02-28 03:22:23] 2026-02-28 02:22:22,781 | INFO     | all workflow threads have been joined
[2026-02-28 03:22:23] 2026-02-28 02:22:22,782 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-28 03:22:23] 2026-02-28 02:22:22,782 | INFO     | traces error code: 0
[2026-02-28 03:22:23] 2026-02-28 02:22:22,782 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-28 03:22:23] 2026-02-28 02:22:22,899 [wrapper] ==== pilot stdout END ====
[2026-02-28 03:22:23] 2026-02-28 02:22:22,905 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-28 03:22:23] 2026-02-28 02:22:22,912 [wrapper] pilotpid: 1058630
[2026-02-28 03:22:23] 2026-02-28 02:22:22,919 [wrapper] Pilot exit status: 0
[2026-02-28 03:22:23] 2026-02-28 02:22:22,941 [wrapper] pandaids: 7031564472
[2026-02-28 03:22:23] 2026-02-28 02:22:23,008 [wrapper] cleanup supervisor_pilot 1127412 1058631
[2026-02-28 03:22:23] 2026-02-28 02:22:23,015 [wrapper] Test setup, not cleaning
[2026-02-28 03:22:23] 2026-02-28 02:22:23,020 [wrapper] apfmon messages muted
[2026-02-28 03:22:23] 2026-02-28 02:22:23,026 [wrapper] ==== wrapper stdout END ====
[2026-02-28 03:22:23] 2026-02-28 02:22:23,032 [wrapper] ==== wrapper stderr END ====
[2026-02-28 03:22:23]  *** Error codes and diagnostics ***
[2026-02-28 03:22:23]     "exeErrorCode": 0,
[2026-02-28 03:22:23]     "exeErrorDiag": "",
[2026-02-28 03:22:23]     "pilotErrorCode": 0,
[2026-02-28 03:22:23]     "pilotErrorDiag": "",
[2026-02-28 03:22:23]  *** Listing of results directory ***
[2026-02-28 03:22:23] insgesamt 533820
[2026-02-28 03:22:23] -rw-r--r-- 1 yeti boinc    584627 Feb 27 12:42 pilot3.tar.gz
[2026-02-28 03:22:23] -rwx------ 1 yeti boinc     36322 Feb 27 12:43 runpilot2-wrapper.sh
[2026-02-28 03:22:23] -rw-r--r-- 1 yeti boinc      5111 Feb 27 12:44 queuedata.json
[2026-02-28 03:22:23] -rw-r--r-- 1 yeti boinc       100 Feb 28 00:05 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-28 03:22:23] -rwxr-xr-x 1 yeti boinc      7986 Feb 28 00:05 run_atlas
[2026-02-28 03:22:23] -rw-r--r-- 1 yeti boinc       105 Feb 28 00:05 job.xml
[2026-02-28 03:22:23] -rw-r--r-- 2 yeti boinc 268957662 Feb 28 00:05 EVNT.48450148._000002.pool.root.1
[2026-02-28 03:22:23] drwxrwx--x 2 yeti boinc      4096 Feb 28 00:05 shared
[2026-02-28 03:22:23] -rw-r--r-- 2 yeti boinc    597972 Feb 28 00:05 input.tar.gz
[2026-02-28 03:22:23] -rw-r--r-- 2 yeti boinc     15845 Feb 28 00:05 start_atlas.sh
[2026-02-28 03:22:23] -rw-r--r-- 1 yeti boinc      6558 Feb 28 00:05 init_data.xml
[2026-02-28 03:22:23] -rw-r--r-- 1 yeti boinc         0 Feb 28 00:05 boinc_setup_complete
[2026-02-28 03:22:23] -rw-r--r-- 1 yeti boinc         0 Feb 28 00:05 boinc_lockfile
[2026-02-28 03:22:23] -rw-r--r-- 1 yeti boinc      2621 Feb 28 00:05 pandaJob.out
[2026-02-28 03:22:23] -rw------- 1 yeti boinc        52 Feb 28 00:05 setup.sh.local
[2026-02-28 03:22:23] -rw------- 1 yeti boinc    998790 Feb 28 00:05 agis_schedconf.cvmfs.json
[2026-02-28 03:22:23] -rw------- 1 yeti boinc       419 Feb 28 00:05 workernode_map.json
[2026-02-28 03:22:23] drwx------ 5 yeti boinc      4096 Feb 28 00:05 pilot3
[2026-02-28 03:22:23] -rw------- 1 yeti boinc 269652460 Feb 28 03:21 HITS.48843097._000026.pool.root.1
[2026-02-28 03:22:23] -rw-r--r-- 1 yeti boinc       530 Feb 28 03:21 boinc_task_state.xml
[2026-02-28 03:22:23] -rw------- 1 yeti boinc      1019 Feb 28 03:22 memory_monitor_summary.json
[2026-02-28 03:22:23] -rw------- 1 yeti boinc        95 Feb 28 03:22 pilot_heartbeat.json
[2026-02-28 03:22:23] -rw------- 1 yeti boinc   1513015 Feb 28 03:22 agis_ddmendpoints.agis.ALL.json
[2026-02-28 03:22:23] -rw------- 1 yeti boinc    352568 Feb 28 03:22 log.48843097._000026.job.log.tgz.1
[2026-02-28 03:22:23] -rw------- 1 yeti boinc      6261 Feb 28 03:22 heartbeat.json
[2026-02-28 03:22:23] -rw-r--r-- 1 yeti boinc        28 Feb 28 03:22 wrapper_checkpoint.txt
[2026-02-28 03:22:23] -rw-r--r-- 1 yeti boinc      8192 Feb 28 03:22 boinc_mmap_file
[2026-02-28 03:22:23] -rw------- 1 yeti boinc      4624 Feb 28 03:22 pilotlog.txt
[2026-02-28 03:22:23] -rw------- 1 yeti boinc   1687624 Feb 28 03:22 log.48843097._000026.job.log.1
[2026-02-28 03:22:23] -rw------- 1 yeti boinc       357 Feb 28 03:22 output.list
[2026-02-28 03:22:23] -rw-r--r-- 1 yeti boinc       620 Feb 28 03:22 runtime_log
[2026-02-28 03:22:23] -rw------- 1 yeti boinc   2058240 Feb 28 03:22 result.tar.gz
[2026-02-28 03:22:23] -rw------- 1 yeti boinc       641 Feb 28 03:22 wGXMDmvQBG9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmDv4KDmvXrL2n.diag
[2026-02-28 03:22:23] -rw-r--r-- 1 yeti boinc      9537 Feb 28 03:22 runtime_log.err
[2026-02-28 03:22:23] -rw-r--r-- 1 yeti boinc     20628 Feb 28 03:22 stderr.txt
[2026-02-28 03:22:23] HITS file was successfully produced:
[2026-02-28 03:22:23] -rw------- 1 yeti boinc 269652460 Feb 28 03:21 shared/HITS.pool.root.1
[2026-02-28 03:22:23]  *** Contents of shared directory: ***
[2026-02-28 03:22:23] insgesamt 528612
[2026-02-28 03:22:23] -rw-r--r-- 2 yeti boinc 268957662 Feb 28 00:05 ATLAS.root_0
[2026-02-28 03:22:23] -rw-r--r-- 2 yeti boinc    597972 Feb 28 00:05 input.tar.gz
[2026-02-28 03:22:23] -rw-r--r-- 2 yeti boinc     15845 Feb 28 00:05 start_atlas.sh
[2026-02-28 03:22:23] -rw------- 1 yeti boinc 269652460 Feb 28 03:21 HITS.pool.root.1
[2026-02-28 03:22:23] -rw------- 1 yeti boinc   2058240 Feb 28 03:22 result.tar.gz
03:22:25 (1054601): run_atlas exited; CPU time 46080.116633
03:22:25 (1054601): called boinc_finish(0)

</stderr_txt>
]]>

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