Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
23:56:10 (16320): wrapper (7.7.26015): starting
23:56:10 (16320): wrapper: running run_atlas (--nthreads 8)
[2026-02-27 23:56:10] Arguments: --nthreads 8
[2026-02-27 23:56:10] Threads: 8
[2026-02-27 23:56:10] Checking for CVMFS
[2026-02-27 23:56:10] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-27 23:56:27] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-27 23:56:27] Running cvmfs_config stat atlas.cern.ch
[2026-02-27 23:56:27] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-27 23:56:27] 2.11.2.0 18344 106586 100268 156710 0 50 16000917 25165824 0 130560 57 30185431 99.806 29546009 1866 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://141.99.253.245:3128/ 1
[2026-02-27 23:56:27] CVMFS is ok
[2026-02-27 23:56:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-27 23:56:27] Checking for apptainer binary...
[2026-02-27 23:56:27] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-27 23:56:27] Running /usr/bin/apptainer --version
[2026-02-27 23:56:27] apptainer version 1.3.2-1.el7
[2026-02-27 23:56:27] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-27 23:56:28] cg-vwn430.simple-grid.lan
[2026-02-27 23:56:28] apptainer works
[2026-02-27 23:56:28] Set ATHENA_PROC_NUMBER=8
[2026-02-27 23:56:28] Set ATHENA_CORE_NUMBER=8
[2026-02-27 23:56:28] Starting ATLAS job with PandaID=7021110902
[2026-02-27 23:56:28] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-28 02:52:03]  *** The last 200 lines of the pilot log: ***
[2026-02-28 02:52:03] 2026-02-28 01:50:55,413 | INFO     | log transfer has been attempted: DONE
[2026-02-28 02:52:03] 2026-02-28 01:50:55,414 | INFO     | job 7021110902 has finished - writing final server update
[2026-02-28 02:52:03] 2026-02-28 01:50:55,414 | INFO     | total number of processed events: 400 (read)
[2026-02-28 02:52:03] 2026-02-28 01:50:55,416 | INFO     | using path: /var/lib/boinc/slots/6/PanDA_Pilot-7021110902/memory_monitor_summary.json (trf name=prmon)
[2026-02-28 02:52:03] 2026-02-28 01:50:55,417 | INFO     | extracted standard info from prmon json
[2026-02-28 02:52:03] 2026-02-28 01:50:55,417 | INFO     | extracted standard memory fields from prmon json
[2026-02-28 02:52:03] 2026-02-28 01:50:55,417 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-28 02:52:03] 2026-02-28 01:50:55,417 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-28 02:52:03] 2026-02-28 01:50:55,417 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-28 02:52:03] 2026-02-28 01:50:55,421 | INFO     | fitting pss+swap vs Time
[2026-02-28 02:52:03] 2026-02-28 01:50:55,422 | INFO     | sum of square deviations: 1523386702.5
[2026-02-28 02:52:03] 2026-02-28 01:50:55,423 | INFO     | sum of deviations: 17563532299.0
[2026-02-28 02:52:03] 2026-02-28 01:50:55,423 | INFO     | mean x: 1772238253.5
[2026-02-28 02:52:03] 2026-02-28 01:50:55,423 | INFO     | mean y: 2523170.9294117647
[2026-02-28 02:52:03] 2026-02-28 01:50:55,423 | INFO     | intersect: -20430085145.651714
[2026-02-28 02:52:03] 2026-02-28 01:50:55,424 | INFO     | chi2: 2.2346881063608657
[2026-02-28 02:52:03] 2026-02-28 01:50:55,424 | INFO     | sum of square deviations: 1392881930.0
[2026-02-28 02:52:03] 2026-02-28 01:50:55,425 | INFO     | sum of deviations: 28310339791.000004
[2026-02-28 02:52:03] 2026-02-28 01:50:55,425 | INFO     | mean x: 1772238101.0
[2026-02-28 02:52:03] 2026-02-28 01:50:55,425 | INFO     | mean y: 2535406.6484848484
[2026-02-28 02:52:03] 2026-02-28 01:50:55,425 | INFO     | intersect: -36018222526.41378
[2026-02-28 02:52:03] 2026-02-28 01:50:55,426 | INFO     | chi2: 1.4571837558852017
[2026-02-28 02:52:03] 2026-02-28 01:50:55,426 | INFO     | current chi2=1.4571837558852017 (change=34.792521974881346 %)
[2026-02-28 02:52:03] 2026-02-28 01:50:55,426 | INFO     | sum of square deviations: 1270051720.0
[2026-02-28 02:52:03] 2026-02-28 01:50:55,427 | INFO     | sum of deviations: 27277445945.0
[2026-02-28 02:52:03] 2026-02-28 01:50:55,428 | INFO     | mean x: 1772237948.5
[2026-02-28 02:52:03] 2026-02-28 01:50:55,428 | INFO     | mean y: 2534123.875
[2026-02-28 02:52:03] 2026-02-28 01:50:55,428 | INFO     | intersect: -38060581008.07132
[2026-02-28 02:52:03] 2026-02-28 01:50:55,428 | INFO     | chi2: 1.4582691514277502
[2026-02-28 02:52:03] 2026-02-28 01:50:55,428 | INFO     | current chi2=1.4582691514277502 (change=-0.07448583873961354 %)
[2026-02-28 02:52:03] 2026-02-28 01:50:55,429 | INFO     | right removable region: 159
[2026-02-28 02:52:03] 2026-02-28 01:50:55,429 | INFO     | sum of square deviations: 1392881930.0
[2026-02-28 02:52:03] 2026-02-28 01:50:55,430 | INFO     | sum of deviations: -8199362275.0
[2026-02-28 02:52:03] 2026-02-28 01:50:55,430 | INFO     | mean x: 1772238406.0
[2026-02-28 02:52:03] 2026-02-28 01:50:55,430 | INFO     | mean y: 2552866.5757575757
[2026-02-28 02:52:03] 2026-02-28 01:50:55,431 | INFO     | intersect: 10435041375.104641
[2026-02-28 02:52:03] 2026-02-28 01:50:55,431 | INFO     | chi2: 0.8440917831030297
[2026-02-28 02:52:03] 2026-02-28 01:50:55,431 | INFO     | current chi2=0.8440917831030297 (change=62.227758732845615 %)
[2026-02-28 02:52:03] 2026-02-28 01:50:55,431 | INFO     | sum of square deviations: 1270051720.0
[2026-02-28 02:52:03] 2026-02-28 01:50:55,432 | INFO     | sum of deviations: -6620750412.0
[2026-02-28 02:52:03] 2026-02-28 01:50:55,433 | INFO     | mean x: 1772238558.5
[2026-02-28 02:52:03] 2026-02-28 01:50:55,433 | INFO     | mean y: 2550828.4125
[2026-02-28 02:52:03] 2026-02-28 01:50:55,433 | INFO     | intersect: 9241189681.916168
[2026-02-28 02:52:03] 2026-02-28 01:50:55,433 | INFO     | chi2: 0.8222896465649053
[2026-02-28 02:52:03] 2026-02-28 01:50:55,433 | INFO     | current chi2=0.8222896465649053 (change=2.582910647225574 %)
[2026-02-28 02:52:03] 2026-02-28 01:50:55,433 | INFO     | left removable region: 20
[2026-02-28 02:52:03] 2026-02-28 01:50:55,434 | INFO     | sum of square deviations: 832722590.0
[2026-02-28 02:52:03] 2026-02-28 01:50:55,435 | INFO     | sum of deviations: 3779956317.0000005
[2026-02-28 02:52:03] 2026-02-28 01:50:55,435 | INFO     | mean x: 1772238528.0
[2026-02-28 02:52:03] 2026-02-28 01:50:55,435 | INFO     | mean y: 2564572.964028777
[2026-02-28 02:52:03] 2026-02-28 01:50:55,435 | INFO     | intersect: -8042112369.382861
[2026-02-28 02:52:03] 2026-02-28 01:50:55,435 | INFO     | chi2: 0.00039006612892153545
[2026-02-28 02:52:03] 2026-02-28 01:50:55,436 | INFO     | current memory leak: 4.54 B/s (using 139 data points, chi2=0.00)
[2026-02-28 02:52:03] 2026-02-28 01:50:55,436 | INFO     | could have reported an average CPU frequency of 1999 MHz (9 samples)
[2026-02-28 02:52:03] 2026-02-28 01:50:55,436 | INFO     | ..............................
[2026-02-28 02:52:03] 2026-02-28 01:50:55,436 | INFO     | . Timing measurements:
[2026-02-28 02:52:03] 2026-02-28 01:50:55,437 | INFO     | . get job = 0 s
[2026-02-28 02:52:03] 2026-02-28 01:50:55,437 | INFO     | . initial setup = 6 s
[2026-02-28 02:52:03] 2026-02-28 01:50:55,437 | INFO     | . payload setup = 22 s
[2026-02-28 02:52:03] 2026-02-28 01:50:55,437 | INFO     | . stage-in = 0 s
[2026-02-28 02:52:03] 2026-02-28 01:50:55,437 | INFO     | . payload execution = 10351 s
[2026-02-28 02:52:03] 2026-02-28 01:50:55,437 | INFO     | . stage-out = 1 s
[2026-02-28 02:52:03] 2026-02-28 01:50:55,437 | INFO     | . log creation = 0 s
[2026-02-28 02:52:03] 2026-02-28 01:50:55,437 | INFO     | ..............................
[2026-02-28 02:52:03] 2026-02-28 01:50:55,628 | INFO     | time since job start (10396s) is within the limit (349056.0s)
[2026-02-28 02:52:03] 2026-02-28 01:50:55,967 | INFO     | 
[2026-02-28 02:52:03] 2026-02-28 01:50:55,968 | INFO     | job summary report
[2026-02-28 02:52:03] 2026-02-28 01:50:55,968 | INFO     | --------------------------------------------------
[2026-02-28 02:52:03] 2026-02-28 01:50:55,968 | INFO     | PanDA job id: 7021110902
[2026-02-28 02:52:03] 2026-02-28 01:50:55,968 | INFO     | task id: 48508763
[2026-02-28 02:52:03] 2026-02-28 01:50:55,968 | INFO     | errors: (none)
[2026-02-28 02:52:03] 2026-02-28 01:50:55,968 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-28 02:52:03] 2026-02-28 01:50:55,968 | INFO     | pilot state: finished 
[2026-02-28 02:52:03] 2026-02-28 01:50:55,968 | INFO     | transexitcode: 0
[2026-02-28 02:52:03] 2026-02-28 01:50:55,968 | INFO     | exeerrorcode: 0
[2026-02-28 02:52:03] 2026-02-28 01:50:55,969 | INFO     | exeerrordiag: 
[2026-02-28 02:52:03] 2026-02-28 01:50:55,969 | INFO     | exitcode: 0
[2026-02-28 02:52:03] 2026-02-28 01:50:55,969 | INFO     | exitmsg: OK
[2026-02-28 02:52:03] 2026-02-28 01:50:55,969 | INFO     | cpuconsumptiontime: 78156 s
[2026-02-28 02:52:03] 2026-02-28 01:50:55,969 | INFO     | nevents: 400
[2026-02-28 02:52:03] 2026-02-28 01:50:55,969 | INFO     | neventsw: 0
[2026-02-28 02:52:03] 2026-02-28 01:50:55,969 | INFO     | pid: 24830
[2026-02-28 02:52:03] 2026-02-28 01:50:55,969 | INFO     | pgrp: 24830
[2026-02-28 02:52:03] 2026-02-28 01:50:55,969 | INFO     | corecount: 8
[2026-02-28 02:52:03] 2026-02-28 01:50:55,969 | INFO     | event service: False
[2026-02-28 02:52:03] 2026-02-28 01:50:55,969 | INFO     | sizes: {0: 2281773, 1: 2282290, 12: 2282290, 10376: 2311033, 10377: 2311032, 10378: 2320086, 10381: 2320270, 10384: 2320528}
[2026-02-28 02:52:03] 2026-02-28 01:50:55,969 | INFO     | --------------------------------------------------
[2026-02-28 02:52:03] 2026-02-28 01:50:55,970 | INFO     | 
[2026-02-28 02:52:03] 2026-02-28 01:50:55,970 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2026-02-28 02:52:03] 2026-02-28 01:50:55,995 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-28 02:52:03] 2026-02-28 01:50:55,995 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-28 02:52:03] 2026-02-28 01:50:55,995 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-28 02:52:03] 2026-02-28 01:50:55,995 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-28 02:52:03] 2026-02-28 01:50:55,995 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-28 02:52:03] 2026-02-28 01:50:55,995 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-28 02:52:03] 2026-02-28 01:50:55,996 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-28 02:52:03] 2026-02-28 01:50:55,996 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-28 02:52:03] 2026-02-28 01:50:55,996 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-28 02:52:03] 2026-02-28 01:50:55,996 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-28 02:52:03] 2026-02-28 01:50:55,996 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-28 02:52:03] 2026-02-28 01:50:55,996 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-28 02:52:03] 2026-02-28 01:50:55,996 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-28 02:52:03] 2026-02-28 01:50:55,996 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-28 02:52:03] 2026-02-28 01:50:55,996 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-28 02:52:03] 2026-02-28 01:50:55,996 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-28 02:52:03] 2026-02-28 01:50:55,997 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-28 02:52:03] 2026-02-28 01:50:55,997 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-28 02:52:03] 2026-02-28 01:50:55,997 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-28 02:52:03] 2026-02-28 01:50:55,997 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-28 02:52:03] 2026-02-28 01:50:55,997 | INFO     | job 7021110902 has completed (purged errors)
[2026-02-28 02:52:03] 2026-02-28 01:50:55,997 | INFO     | overall cleanup function is called
[2026-02-28 02:52:03] 2026-02-28 01:50:57,005 | INFO     | --- collectZombieJob: --- 10, [24830]
[2026-02-28 02:52:03] 2026-02-28 01:50:57,006 | INFO     | zombie collector waiting for pid 24830
[2026-02-28 02:52:03] 2026-02-28 01:50:57,006 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-28 02:52:03] 2026-02-28 01:50:57,006 | INFO     | collected zombie processes
[2026-02-28 02:52:03] 2026-02-28 01:50:57,006 | INFO     | will attempt to kill all subprocesses of pid=24830
[2026-02-28 02:52:03] 2026-02-28 01:50:57,065 | INFO     | process IDs to be killed: [24830] (in reverse order)
[2026-02-28 02:52:03] 2026-02-28 01:50:57,110 | WARNING  | found no corresponding commands to process id(s)
[2026-02-28 02:52:03] 2026-02-28 01:50:57,110 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-28 02:52:03] 2026-02-28 01:50:57,112 | INFO     | did not find any defunct processes belonging to 24830
[2026-02-28 02:52:03] 2026-02-28 01:50:57,113 | INFO     | did not find any defunct processes belonging to 24830
[2026-02-28 02:52:03] 2026-02-28 01:50:57,114 | INFO     | ready for new job
[2026-02-28 02:52:03] 2026-02-28 01:50:57,114 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-28 02:52:03] 2026-02-28 01:50:57,116 | INFO     | **************************************
[2026-02-28 02:52:03] 2026-02-28 01:50:57,116 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-28 02:52:03] 2026-02-28 01:50:57,116 | INFO     | **************************************
[2026-02-28 02:52:03] 2026-02-28 01:50:57,116 | INFO     | 
[2026-02-28 02:52:03] 2026-02-28 01:50:57,117 | INFO     | pilot is running in a VM
[2026-02-28 02:52:03] 2026-02-28 01:50:57,117 | INFO     | architecture information:
[2026-02-28 02:52:03] 2026-02-28 01:50:57,117 | INFO     | executing command: cat /etc/os-release
[2026-02-28 02:52:03] 2026-02-28 01:50:57,136 | INFO     | cat /etc/os-release:
[2026-02-28 02:52:03] NAME="CentOS Linux"
[2026-02-28 02:52:03] VERSION="7 (Core)"
[2026-02-28 02:52:03] ID="centos"
[2026-02-28 02:52:03] ID_LIKE="rhel fedora"
[2026-02-28 02:52:03] VERSION_ID="7"
[2026-02-28 02:52:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-28 02:52:03] ANSI_COLOR="0;31"
[2026-02-28 02:52:03] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-28 02:52:03] HOME_URL="https://www.centos.org/"
[2026-02-28 02:52:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-28 02:52:03] 
[2026-02-28 02:52:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-28 02:52:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-28 02:52:03] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-28 02:52:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-28 02:52:03] 
[2026-02-28 02:52:03] 2026-02-28 01:50:57,136 | INFO     | **************************************
[2026-02-28 02:52:03] 2026-02-28 01:50:57,639 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2026-02-28 02:52:03] 2026-02-28 01:50:57,658 | INFO     | sufficient remaining disk space (496793288704 B)
[2026-02-28 02:52:03] 2026-02-28 01:50:57,658 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-28 02:52:03] 2026-02-28 01:50:57,659 | INFO     | current server update state: UPDATING_FINAL
[2026-02-28 02:52:03] 2026-02-28 01:50:57,659 | INFO     | update_server=False
[2026-02-28 02:52:03] 2026-02-28 01:50:57,659 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-28 02:52:03] 2026-02-28 01:50:57,659 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-28 02:52:03] 2026-02-28 01:50:58,389 | INFO     | all data control threads have been joined
[2026-02-28 02:52:03] 2026-02-28 01:50:58,465 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-28 02:52:03] 2026-02-28 01:50:58,465 | INFO     | aborting loop
[2026-02-28 02:52:03] 2026-02-28 01:50:58,664 | INFO     | [job] retrieve thread has finished
[2026-02-28 02:52:03] 2026-02-28 01:50:58,670 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-28 02:52:03] 2026-02-28 01:50:58,780 | INFO     | all payload control threads have been joined
[2026-02-28 02:52:03] 2026-02-28 01:50:58,787 | INFO     | [payload] validate_pre thread has finished
[2026-02-28 02:52:03] 2026-02-28 01:50:58,880 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-28 02:52:03] 2026-02-28 01:50:58,900 | INFO     | [payload] validate_post thread has finished
[2026-02-28 02:52:03] 2026-02-28 01:50:58,966 | INFO     | [job] validate thread has finished
[2026-02-28 02:52:03] 2026-02-28 01:50:59,120 | INFO     | all job control threads have been joined
[2026-02-28 02:52:03] 2026-02-28 01:50:59,264 | INFO     | [job] create_data_payload thread has finished
[2026-02-28 02:52:03] 2026-02-28 01:50:59,395 | INFO     | [data] control thread has finished
[2026-02-28 02:52:03] 2026-02-28 01:50:59,422 | INFO     | [payload] failed_post thread has finished
[2026-02-28 02:52:03] 2026-02-28 01:50:59,470 | INFO     | [job] job monitor thread has finished
[2026-02-28 02:52:03] 2026-02-28 01:50:59,604 | INFO     | [payload] execute_payloads thread has finished
[2026-02-28 02:52:03] 2026-02-28 01:50:59,665 | INFO     | [data] copytool_out thread has finished
[2026-02-28 02:52:03] 2026-02-28 01:50:59,785 | INFO     | [data] copytool_in thread has finished
[2026-02-28 02:52:03] 2026-02-28 01:50:59,786 | INFO     | [payload] control thread has finished
[2026-02-28 02:52:03] 2026-02-28 01:51:00,126 | INFO     | [job] control thread has finished
[2026-02-28 02:52:03] 2026-02-28 01:51:00,560 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-28 02:52:03] 2026-02-28 01:51:01,565 | INFO     | [job] queue monitor thread has finished
[2026-02-28 02:52:03] 2026-02-28 01:51:02,676 | INFO     | [data] queue_monitor thread has finished
[2026-02-28 02:52:03] 2026-02-28 01:51:28,708 | INFO     | PID=20411 has CPU usage=4.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-02-28 02:52:03] 2026-02-28 01:51:28,709 | INFO     | found 0 job(s) in 20 queues
[2026-02-28 02:52:03] 2026-02-28 01:51:28,709 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-28 02:52:03] 2026-02-28 01:51:28,709 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-28 02:52:03] 2026-02-28 01:51:56,702 | INFO     | [monitor] cgroup control has ended
[2026-02-28 02:52:03] 2026-02-28 01:51:58,334 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139963595462464)>', '<ExcThread(monitor, started 139962716518144)>']
[2026-02-28 02:52:03] 2026-02-28 01:51:58,864 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-28 02:52:03] 2026-02-28 01:51:58,864 | INFO     | [monitor] control thread has ended
[2026-02-28 02:52:03] 2026-02-28 01:52:03,353 | INFO     | all workflow threads have been joined
[2026-02-28 02:52:03] 2026-02-28 01:52:03,353 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-28 02:52:03] 2026-02-28 01:52:03,353 | INFO     | traces error code: 0
[2026-02-28 02:52:03] 2026-02-28 01:52:03,353 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-28 02:52:03] 2026-02-28 01:52:03,485 [wrapper] ==== pilot stdout END ====
[2026-02-28 02:52:03] 2026-02-28 01:52:03,489 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-28 02:52:03] 2026-02-28 01:52:03,492 [wrapper] pilotpid: 20411
[2026-02-28 02:52:03] 2026-02-28 01:52:03,495 [wrapper] Pilot exit status: 0
[2026-02-28 02:52:03] 2026-02-28 01:52:03,509 [wrapper] pandaids: 7021110902
[2026-02-28 02:52:03] 2026-02-28 01:52:03,540 [wrapper] cleanup supervisor_pilot 30283 20412
[2026-02-28 02:52:03] 2026-02-28 01:52:03,544 [wrapper] Test setup, not cleaning
[2026-02-28 02:52:03] 2026-02-28 01:52:03,554 [wrapper] apfmon messages muted
[2026-02-28 02:52:03] 2026-02-28 01:52:03,557 [wrapper] ==== wrapper stdout END ====
[2026-02-28 02:52:03] 2026-02-28 01:52:03,560 [wrapper] ==== wrapper stderr END ====
[2026-02-28 02:52:03]  *** Error codes and diagnostics ***
[2026-02-28 02:52:03]     "exeErrorCode": 0,
[2026-02-28 02:52:03]     "exeErrorDiag": "",
[2026-02-28 02:52:03]     "pilotErrorCode": 0,
[2026-02-28 02:52:03]     "pilotErrorDiag": "",
[2026-02-28 02:52:03]  *** Listing of results directory ***
[2026-02-28 02:52:03] total 951448
[2026-02-28 02:52:03] -rw-r--r--. 1 boinc boinc      5111 Feb 19 11:23 queuedata.json
[2026-02-28 02:52:03] -rw-r--r--. 1 boinc boinc    584627 Feb 19 11:23 pilot3.tar.gz
[2026-02-28 02:52:03] -rwx------. 1 boinc boinc     36322 Feb 19 11:24 runpilot2-wrapper.sh
[2026-02-28 02:52:03] -rw-r--r--. 1 boinc boinc       100 Feb 27 23:56 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-28 02:52:03] -rwxr-xr-x. 1 boinc boinc      7986 Feb 27 23:56 run_atlas
[2026-02-28 02:52:03] -rw-r--r--. 1 boinc boinc       105 Feb 27 23:56 job.xml
[2026-02-28 02:52:03] -rw-r--r--. 1 boinc boinc      6390 Feb 27 23:56 init_data.xml
[2026-02-28 02:52:03] -rw-r--r--. 2 boinc boinc 680826816 Feb 27 23:56 EVNT.48508760._000838.pool.root.1
[2026-02-28 02:52:03] -rw-r--r--. 2 boinc boinc     15845 Feb 27 23:56 start_atlas.sh
[2026-02-28 02:52:03] drwxrwx--x. 2 boinc boinc        68 Feb 27 23:56 shared
[2026-02-28 02:52:03] -rw-r--r--. 2 boinc boinc    597954 Feb 27 23:56 input.tar.gz
[2026-02-28 02:52:03] -rw-r--r--. 1 boinc boinc         0 Feb 27 23:56 boinc_lockfile
[2026-02-28 02:52:03] -rw-r--r--. 1 boinc boinc      2552 Feb 27 23:56 pandaJob.out
[2026-02-28 02:52:03] -rw-------. 1 boinc boinc    998790 Feb 27 23:57 agis_schedconf.cvmfs.json
[2026-02-28 02:52:03] -rw-------. 1 boinc boinc   1513015 Feb 27 23:57 agis_ddmendpoints.agis.ALL.json
[2026-02-28 02:52:03] -rw-------. 1 boinc boinc       415 Feb 27 23:57 workernode_map.json
[2026-02-28 02:52:03] drwx------. 5 boinc boinc      4096 Feb 27 23:57 pilot3
[2026-02-28 02:52:03] -rw-r--r--. 1 boinc boinc       531 Feb 28 02:49 boinc_task_state.xml
[2026-02-28 02:52:03] -rw-------. 1 boinc boinc 285766101 Feb 28 02:49 HITS.48508763._043663.pool.root.1
[2026-02-28 02:52:03] -rw-------. 1 boinc boinc        95 Feb 28 02:50 pilot_heartbeat.json
[2026-02-28 02:52:03] -rw-------. 1 boinc boinc      1015 Feb 28 02:50 memory_monitor_summary.json
[2026-02-28 02:52:03] -rw-------. 1 boinc boinc    436570 Feb 28 02:50 log.48508763._043663.job.log.tgz.1
[2026-02-28 02:52:03] -rw-------. 1 boinc boinc      6315 Feb 28 02:50 heartbeat.json
[2026-02-28 02:52:03] -rw-r--r--. 1 boinc boinc      8192 Feb 28 02:51 boinc_mmap_file
[2026-02-28 02:52:03] -rw-r--r--. 1 boinc boinc        28 Feb 28 02:51 wrapper_checkpoint.txt
[2026-02-28 02:52:03] -rw-------. 1 boinc boinc      4805 Feb 28 02:52 pilotlog.txt
[2026-02-28 02:52:03] -rw-------. 1 boinc boinc   1451823 Feb 28 02:52 log.48508763._043663.job.log.1
[2026-02-28 02:52:03] -rw-------. 1 boinc boinc       357 Feb 28 02:52 output.list
[2026-02-28 02:52:03] -rw-r--r--. 1 boinc boinc       620 Feb 28 02:52 runtime_log
[2026-02-28 02:52:03] -rw-------. 1 boinc boinc   1904640 Feb 28 02:52 result.tar.gz
[2026-02-28 02:52:03] -rw-r--r--. 1 boinc boinc      8816 Feb 28 02:52 runtime_log.err
[2026-02-28 02:52:03] -rw-------. 1 boinc boinc       654 Feb 28 02:52 qk1MDmdNGD9n9Rq4apOajLDm4fhM0noT9bVooX4SDmwEwKDmI2hj8m.diag
[2026-02-28 02:52:03] -rw-r--r--. 1 boinc boinc     20719 Feb 28 02:52 stderr.txt
[2026-02-28 02:52:03] HITS file was successfully produced:
[2026-02-28 02:52:03] -rw-------. 1 boinc boinc 285766101 Feb 28 02:49 shared/HITS.pool.root.1
[2026-02-28 02:52:03]  *** Contents of shared directory: ***
[2026-02-28 02:52:03] total 946404
[2026-02-28 02:52:03] -rw-r--r--. 2 boinc boinc 680826816 Feb 27 23:56 ATLAS.root_0
[2026-02-28 02:52:03] -rw-r--r--. 2 boinc boinc     15845 Feb 27 23:56 start_atlas.sh
[2026-02-28 02:52:03] -rw-r--r--. 2 boinc boinc    597954 Feb 27 23:56 input.tar.gz
[2026-02-28 02:52:03] -rw-------. 1 boinc boinc 285766101 Feb 28 02:49 HITS.pool.root.1
[2026-02-28 02:52:03] -rw-------. 1 boinc boinc   1904640 Feb 28 02:52 result.tar.gz
02:52:05 (16320): run_atlas exited; CPU time 78213.785361
02:52:05 (16320): called boinc_finish(0)

</stderr_txt>
]]>

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