Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:32:41 (2197117): wrapper (7.7.26015): starting
02:32:41 (2197117): wrapper: running run_atlas (--nthreads 4)
[2026-03-03 02:32:41] Arguments: --nthreads 4
[2026-03-03 02:32:41] Threads: 4
[2026-03-03 02:32:41] Checking for CVMFS
[2026-03-03 02:32:41] No cvmfs_config command found, will try listing directly
[2026-03-03 02:32:41] CVMFS is ok
[2026-03-03 02:32:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-03 02:32:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-03 02:32:41] Further information can be found at the LHC@home message board.
[2026-03-03 02:32:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-03 02:32:41] Checking for apptainer binary...
[2026-03-03 02:32:41] which: no apptainer in ((null))
[2026-03-03 02:32:41] apptainer is not installed, using version from CVMFS
[2026-03-03 02:32:41] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-03 02:32:41] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot48/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut17.grid.cesnet.cz
[2026-03-03 02:32:41] apptainer works
[2026-03-03 02:32:41] Set ATHENA_PROC_NUMBER=4
[2026-03-03 02:32:41] Set ATHENA_CORE_NUMBER=4
[2026-03-03 02:32:41] Starting ATLAS job with PandaID=7031401515
[2026-03-03 02:32:41] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot48/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-03 06:05:11]  *** The last 200 lines of the pilot log: ***
[2026-03-03 06:05:11] 2026-03-03 04:49:43,292 | INFO     | extracted standard memory fields from prmon json
[2026-03-03 06:05:11] 2026-03-03 04:49:43,292 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-03 06:05:11] 2026-03-03 04:49:43,293 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-03 06:05:11] 2026-03-03 04:49:43,293 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-03 06:05:11] 2026-03-03 04:49:43,297 | INFO     | fitting pss+swap vs Time
[2026-03-03 06:05:11] 2026-03-03 04:49:43,297 | INFO     | sum of square deviations: 2229146912.0
[2026-03-03 06:05:11] 2026-03-03 04:49:43,298 | INFO     | sum of deviations: 18961281358.000004
[2026-03-03 06:05:11] 2026-03-03 04:49:43,299 | INFO     | mean x: 1772507468.0
[2026-03-03 06:05:11] 2026-03-03 04:49:43,299 | INFO     | mean y: 2343324.3367875647
[2026-03-03 06:05:11] 2026-03-03 04:49:43,299 | INFO     | intersect: -15074730613.2217
[2026-03-03 06:05:11] 2026-03-03 04:49:43,299 | INFO     | chi2: 1.334701099978003
[2026-03-03 06:05:11] 2026-03-03 04:49:43,299 | INFO     | sum of square deviations: 2060343747.0
[2026-03-03 06:05:11] 2026-03-03 04:49:43,301 | INFO     | sum of deviations: 18286127380.0
[2026-03-03 06:05:11] 2026-03-03 04:49:43,301 | INFO     | mean x: 1772507315.5
[2026-03-03 06:05:11] 2026-03-03 04:49:43,301 | INFO     | mean y: 2342714.255319149
[2026-03-03 06:05:11] 2026-03-03 04:49:43,301 | INFO     | intersect: -15729155779.823324
[2026-03-03 06:05:11] 2026-03-03 04:49:43,301 | INFO     | chi2: 1.3355691663646587
[2026-03-03 06:05:11] 2026-03-03 04:49:43,301 | INFO     | current chi2=1.3355691663646587 (change=-0.0650382611260398 %)
[2026-03-03 06:05:11] 2026-03-03 04:49:43,301 | INFO     | right removable region: 187
[2026-03-03 06:05:11] 2026-03-03 04:49:43,302 | INFO     | sum of square deviations: 2060343747.0
[2026-03-03 06:05:11] 2026-03-03 04:49:43,303 | INFO     | sum of deviations: -5548962538.999998
[2026-03-03 06:05:11] 2026-03-03 04:49:43,303 | INFO     | mean x: 1772507620.5
[2026-03-03 06:05:11] 2026-03-03 04:49:43,303 | INFO     | mean y: 2365166.5319148935
[2026-03-03 06:05:11] 2026-03-03 04:49:43,303 | INFO     | intersect: 4776121196.596214
[2026-03-03 06:05:11] 2026-03-03 04:49:43,304 | INFO     | chi2: 0.015072528636933175
[2026-03-03 06:05:11] 2026-03-03 04:49:43,304 | INFO     | current chi2=0.015072528636933175 (change=98.87071879710135 %)
[2026-03-03 06:05:11] 2026-03-03 04:49:43,304 | INFO     | sum of square deviations: 1900284932.0
[2026-03-03 06:05:11] 2026-03-03 04:49:43,305 | INFO     | sum of deviations: -5625379556.999998
[2026-03-03 06:05:11] 2026-03-03 04:49:43,305 | INFO     | mean x: 1772507773.0
[2026-03-03 06:05:11] 2026-03-03 04:49:43,305 | INFO     | mean y: 2365209.6284153005
[2026-03-03 06:05:11] 2026-03-03 04:49:43,306 | INFO     | intersect: 5249488324.141325
[2026-03-03 06:05:11] 2026-03-03 04:49:43,306 | INFO     | chi2: 0.009392081192891753
[2026-03-03 06:05:11] 2026-03-03 04:49:43,306 | INFO     | current chi2=0.009392081192891753 (change=37.68742180474124 %)
[2026-03-03 06:05:11] 2026-03-03 04:49:43,306 | INFO     | sum of square deviations: 1748737904.5
[2026-03-03 06:05:11] 2026-03-03 04:49:43,307 | INFO     | sum of deviations: -4645017599.499998
[2026-03-03 06:05:11] 2026-03-03 04:49:43,307 | INFO     | mean x: 1772507925.5
[2026-03-03 06:05:11] 2026-03-03 04:49:43,307 | INFO     | mean y: 2364229.938202247
[2026-03-03 06:05:11] 2026-03-03 04:49:43,308 | INFO     | intersect: 4710520030.76692
[2026-03-03 06:05:11] 2026-03-03 04:49:43,308 | INFO     | chi2: 0.008611178638889874
[2026-03-03 06:05:11] 2026-03-03 04:49:43,308 | INFO     | current chi2=0.008611178638889874 (change=8.31447831384691 %)
[2026-03-03 06:05:11] 2026-03-03 04:49:43,308 | INFO     | left removable region: 30
[2026-03-03 06:05:11] 2026-03-03 04:49:43,309 | INFO     | sum of square deviations: 1199940638.0
[2026-03-03 06:05:11] 2026-03-03 04:49:43,310 | INFO     | sum of deviations: -1699910301.9999998
[2026-03-03 06:05:11] 2026-03-03 04:49:43,310 | INFO     | mean x: 1772508200.0
[2026-03-03 06:05:11] 2026-03-03 04:49:43,310 | INFO     | mean y: 2360476.770700637
[2026-03-03 06:05:11] 2026-03-03 04:49:43,310 | INFO     | intersect: 2513405485.2817597
[2026-03-03 06:05:11] 2026-03-03 04:49:43,310 | INFO     | chi2: 0.005917786198897245
[2026-03-03 06:05:11] 2026-03-03 04:49:43,310 | INFO     | current memory leak: -1.42 B/s (using 157 data points, chi2=0.01)
[2026-03-03 06:05:11] 2026-03-03 04:49:43,311 | INFO     | could have reported an average CPU frequency of 2702 MHz (10 samples)
[2026-03-03 06:05:11] 2026-03-03 04:49:43,311 | INFO     | ..............................
[2026-03-03 06:05:11] 2026-03-03 04:49:43,311 | INFO     | . Timing measurements:
[2026-03-03 06:05:11] 2026-03-03 04:49:43,311 | INFO     | . get job = 0 s
[2026-03-03 06:05:11] 2026-03-03 04:49:43,311 | INFO     | . initial setup = 8 s
[2026-03-03 06:05:11] 2026-03-03 04:49:43,311 | INFO     | . payload setup = 9 s
[2026-03-03 06:05:11] 2026-03-03 04:49:43,311 | INFO     | . stage-in = 0 s
[2026-03-03 06:05:11] 2026-03-03 04:49:43,311 | INFO     | . payload execution = 11772 s
[2026-03-03 06:05:11] 2026-03-03 04:49:43,312 | INFO     | . stage-out = 1 s
[2026-03-03 06:05:11] 2026-03-03 04:49:43,312 | INFO     | . log creation = 0 s
[2026-03-03 06:05:11] 2026-03-03 04:49:43,312 | INFO     | ..............................
[2026-03-03 06:05:11] 2026-03-03 04:49:43,442 | INFO     | 
[2026-03-03 06:05:11] 2026-03-03 04:49:43,442 | INFO     | job summary report
[2026-03-03 06:05:11] 2026-03-03 04:49:43,442 | INFO     | --------------------------------------------------
[2026-03-03 06:05:11] 2026-03-03 04:49:43,442 | INFO     | PanDA job id: 7031401515
[2026-03-03 06:05:11] 2026-03-03 04:49:43,442 | INFO     | task id: 48838577
[2026-03-03 06:05:11] 2026-03-03 04:49:43,443 | INFO     | errors: (none)
[2026-03-03 06:05:11] 2026-03-03 04:49:43,443 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-03 06:05:11] 2026-03-03 04:49:43,443 | INFO     | pilot state: finished 
[2026-03-03 06:05:11] 2026-03-03 04:49:43,443 | INFO     | transexitcode: 0
[2026-03-03 06:05:11] 2026-03-03 04:49:43,443 | INFO     | exeerrorcode: 0
[2026-03-03 06:05:11] 2026-03-03 04:49:43,443 | INFO     | exeerrordiag: 
[2026-03-03 06:05:11] 2026-03-03 04:49:43,443 | INFO     | exitcode: 0
[2026-03-03 06:05:11] 2026-03-03 04:49:43,443 | INFO     | exitmsg: OK
[2026-03-03 06:05:11] 2026-03-03 04:49:43,443 | INFO     | cpuconsumptiontime: 44711 s
[2026-03-03 06:05:11] 2026-03-03 04:49:43,443 | INFO     | nevents: 400
[2026-03-03 06:05:11] 2026-03-03 04:49:43,443 | INFO     | neventsw: 0
[2026-03-03 06:05:11] 2026-03-03 04:49:43,444 | INFO     | pid: 2206470
[2026-03-03 06:05:11] 2026-03-03 04:49:43,444 | INFO     | pgrp: 2206470
[2026-03-03 06:05:11] 2026-03-03 04:49:43,444 | INFO     | corecount: 4
[2026-03-03 06:05:11] 2026-03-03 04:49:43,444 | INFO     | event service: False
[2026-03-03 06:05:11] 2026-03-03 04:49:43,444 | INFO     | sizes: {0: 2281187, 1: 2282316, 12: 2282316, 11785: 2312297, 11787: 2321511}
[2026-03-03 06:05:11] 2026-03-03 04:49:43,444 | INFO     | --------------------------------------------------
[2026-03-03 06:05:11] 2026-03-03 04:49:43,444 | INFO     | 
[2026-03-03 06:05:11] 2026-03-03 04:49:43,444 | INFO     | executing command: ls -lF /scratch/boinc/var/slot48/slots/0
[2026-03-03 06:05:11] 2026-03-03 04:49:43,478 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-03 06:05:11] 2026-03-03 04:49:43,479 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-03 06:05:11] 2026-03-03 04:49:43,479 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-03 06:05:11] 2026-03-03 04:49:43,479 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-03 06:05:11] 2026-03-03 04:49:43,479 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-03 06:05:11] 2026-03-03 04:49:43,479 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-03 06:05:11] 2026-03-03 04:49:43,479 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-03 06:05:11] 2026-03-03 04:49:43,479 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-03 06:05:11] 2026-03-03 04:49:43,479 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-03 06:05:11] 2026-03-03 04:49:43,480 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-03 06:05:11] 2026-03-03 04:49:43,480 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-03 06:05:11] 2026-03-03 04:49:43,480 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-03 06:05:11] 2026-03-03 04:49:43,480 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-03 06:05:11] 2026-03-03 04:49:43,480 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-03 06:05:11] 2026-03-03 04:49:43,480 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-03 06:05:11] 2026-03-03 04:49:43,480 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-03 06:05:11] 2026-03-03 04:49:43,480 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-03 06:05:11] 2026-03-03 04:49:43,480 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-03 06:05:11] 2026-03-03 04:49:43,480 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-03 06:05:11] 2026-03-03 04:49:43,481 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-03 06:05:11] 2026-03-03 04:49:43,481 | INFO     | job 7031401515 has completed (purged errors)
[2026-03-03 06:05:11] 2026-03-03 04:49:43,481 | INFO     | overall cleanup function is called
[2026-03-03 06:05:11] 2026-03-03 04:49:44,490 | INFO     | --- collectZombieJob: --- 10, [2206470]
[2026-03-03 06:05:11] 2026-03-03 04:49:44,491 | INFO     | zombie collector waiting for pid 2206470
[2026-03-03 06:05:11] 2026-03-03 04:49:44,491 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-03 06:05:11] 2026-03-03 04:49:44,491 | INFO     | collected zombie processes
[2026-03-03 06:05:11] 2026-03-03 04:49:44,491 | INFO     | will attempt to kill all subprocesses of pid=2206470
[2026-03-03 06:05:11] 2026-03-03 04:49:45,306 | INFO     | process IDs to be killed: [2206470] (in reverse order)
[2026-03-03 06:05:11] 2026-03-03 04:49:45,616 | WARNING  | found no corresponding commands to process id(s)
[2026-03-03 06:05:11] 2026-03-03 04:49:45,616 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-03 06:05:11] 2026-03-03 04:49:45,647 | INFO     | did not find any defunct processes belonging to 2206470
[2026-03-03 06:05:11] 2026-03-03 04:49:45,675 | INFO     | did not find any defunct processes belonging to 2206470
[2026-03-03 06:05:11] 2026-03-03 04:49:45,676 | INFO     | ready for new job
[2026-03-03 06:05:11] 2026-03-03 04:49:45,676 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-03 06:05:11] 2026-03-03 04:49:45,679 | INFO     | **************************************
[2026-03-03 06:05:11] 2026-03-03 04:49:45,679 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-03 06:05:11] 2026-03-03 04:49:45,679 | INFO     | **************************************
[2026-03-03 06:05:11] 2026-03-03 04:49:45,679 | INFO     | 
[2026-03-03 06:05:11] 2026-03-03 04:49:45,688 | INFO     | architecture information:
[2026-03-03 06:05:11] 2026-03-03 04:49:45,688 | INFO     | executing command: cat /etc/os-release
[2026-03-03 06:05:11] 2026-03-03 04:49:45,712 | INFO     | cat /etc/os-release:
[2026-03-03 06:05:11] NAME="CentOS Linux"
[2026-03-03 06:05:11] VERSION="7 (Core)"
[2026-03-03 06:05:11] ID="centos"
[2026-03-03 06:05:11] ID_LIKE="rhel fedora"
[2026-03-03 06:05:11] VERSION_ID="7"
[2026-03-03 06:05:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-03 06:05:11] ANSI_COLOR="0;31"
[2026-03-03 06:05:11] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-03 06:05:11] HOME_URL="https://www.centos.org/"
[2026-03-03 06:05:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-03 06:05:11] 
[2026-03-03 06:05:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-03 06:05:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-03 06:05:11] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-03 06:05:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-03 06:05:11] 
[2026-03-03 06:05:11] 2026-03-03 04:49:45,713 | INFO     | **************************************
[2026-03-03 06:05:11] 2026-03-03 04:49:46,221 | INFO     | executing command: df -mP /scratch/boinc/var/slot48/slots/0
[2026-03-03 06:05:11] 2026-03-03 04:49:46,253 | INFO     | sufficient remaining disk space (3327828951040 B)
[2026-03-03 06:05:11] 2026-03-03 04:49:46,254 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-03 06:05:11] 2026-03-03 04:49:46,254 | INFO     | current server update state: UPDATING_FINAL
[2026-03-03 06:05:11] 2026-03-03 04:49:46,254 | INFO     | update_server=False
[2026-03-03 06:05:11] 2026-03-03 04:49:46,254 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-03 06:05:11] 2026-03-03 04:49:46,254 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-03 06:05:11] 2026-03-03 04:49:46,369 | INFO     | all job control threads have been joined
[2026-03-03 06:05:11] 2026-03-03 04:49:46,628 | INFO     | all data control threads have been joined
[2026-03-03 06:05:11] 2026-03-03 04:49:47,260 | INFO     | [job] retrieve thread has finished
[2026-03-03 06:05:11] 2026-03-03 04:49:47,319 | WARNING  | process 2206470 can no longer be monitored (due to stat problems) - aborting
[2026-03-03 06:05:11] 2026-03-03 04:49:47,378 | INFO     | [job] control thread has finished
[2026-03-03 06:05:11] 2026-03-03 04:49:47,380 | INFO     | [job] create_data_payload thread has finished
[2026-03-03 06:05:11] 2026-03-03 04:49:47,542 | INFO     | all payload control threads have been joined
[2026-03-03 06:05:11] 2026-03-03 04:49:47,634 | INFO     | [data] control thread has finished
[2026-03-03 06:05:11] 2026-03-03 04:49:47,895 | INFO     | using path: /scratch/boinc/var/slot48/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-03 06:05:11] 2026-03-03 04:49:48,259 | INFO     | [data] copytool_out thread has finished
[2026-03-03 06:05:11] 2026-03-03 04:49:48,315 | INFO     | [payload] failed_post thread has finished
[2026-03-03 06:05:11] 2026-03-03 04:49:48,317 | INFO     | [payload] execute_payloads thread has finished
[2026-03-03 06:05:11] 2026-03-03 04:49:48,423 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-03 06:05:11] 2026-03-03 04:49:48,454 | INFO     | [data] copytool_in thread has finished
[2026-03-03 06:05:11] 2026-03-03 04:49:48,548 | INFO     | [payload] control thread has finished
[2026-03-03 06:05:11] 2026-03-03 04:49:48,633 | INFO     | [job] validate thread has finished
[2026-03-03 06:05:11] 2026-03-03 04:49:48,686 | INFO     | number of running child processes to parent process 2206470: 1
[2026-03-03 06:05:11] 2026-03-03 04:49:48,687 | INFO     | maximum number of monitored processes: 6
[2026-03-03 06:05:11] 2026-03-03 04:49:48,687 | INFO     | aborting job monitoring since job object (job id=7031401515) has expired
[2026-03-03 06:05:11] 2026-03-03 04:49:48,687 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-03 06:05:11] 2026-03-03 04:49:48,687 | INFO     | will abort loop
[2026-03-03 06:05:11] 2026-03-03 04:49:48,755 | INFO     | [payload] validate_pre thread has finished
[2026-03-03 06:05:11] 2026-03-03 04:49:48,854 | INFO     | [payload] validate_post thread has finished
[2026-03-03 06:05:11] 2026-03-03 04:49:49,267 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-03 06:05:11] 2026-03-03 04:49:49,428 | INFO     | [job] queue monitor thread has finished
[2026-03-03 06:05:11] 2026-03-03 04:49:49,691 | INFO     | [job] job monitor thread has finished
[2026-03-03 06:05:11] 2026-03-03 04:49:53,273 | INFO     | [data] queue_monitor thread has finished
[2026-03-03 06:05:11] 2026-03-03 04:49:56,870 | INFO     | job.realtimelogging is not enabled
[2026-03-03 06:05:11] 2026-03-03 04:49:57,875 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-03 06:05:11] 2026-03-03 04:50:17,136 | INFO     | PID=2201406 has CPU usage=14.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-03-03 06:05:11] 2026-03-03 04:50:17,136 | INFO     | .. there are 20 such processes running
[2026-03-03 06:05:11] 2026-03-03 04:50:17,137 | INFO     | found 0 job(s) in 20 queues
[2026-03-03 06:05:11] 2026-03-03 04:50:17,137 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-03 06:05:11] 2026-03-03 04:50:17,138 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-03 06:05:11] 2026-03-03 04:50:23,643 | INFO     | [monitor] cgroup control has ended
[2026-03-03 06:05:11] 2026-03-03 04:50:25,501 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22361900795712)>', '<ExcThread(monitor, started 22361662568192)>']
[2026-03-03 06:05:11] 2026-03-03 04:50:26,177 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-03 06:05:11] 2026-03-03 04:50:26,178 | INFO     | [monitor] control thread has ended
[2026-03-03 06:05:11] 2026-03-03 04:50:30,526 | INFO     | all workflow threads have been joined
[2026-03-03 06:05:11] 2026-03-03 04:50:30,527 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-03 06:05:11] 2026-03-03 04:50:30,527 | INFO     | traces error code: 0
[2026-03-03 06:05:11] 2026-03-03 04:50:30,527 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-03 06:05:11] 2026-03-03 04:50:30,744 [wrapper] ==== pilot stdout END ====
[2026-03-03 06:05:11] 2026-03-03 04:50:30,748 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-03 06:05:11] 2026-03-03 04:50:30,752 [wrapper] pilotpid: 2201406
[2026-03-03 06:05:11] 2026-03-03 04:50:30,756 [wrapper] Pilot exit status: 0
[2026-03-03 06:05:11] 2026-03-03 04:50:30,770 [wrapper] pandaids: 7031401515
[2026-03-03 06:05:11] 2026-03-03 04:50:30,966 [wrapper] cleanup supervisor_pilot 2493493 2201407
[2026-03-03 06:05:11] 2026-03-03 04:50:30,971 [wrapper] Test setup, not cleaning
[2026-03-03 06:05:11] 2026-03-03 04:50:30,979 [wrapper] apfmon messages muted
[2026-03-03 06:05:11] 2026-03-03 04:50:30,983 [wrapper] ==== wrapper stdout END ====
[2026-03-03 06:05:11] 2026-03-03 04:50:30,989 [wrapper] ==== wrapper stderr END ====
[2026-03-03 06:05:11]  *** Error codes and diagnostics ***
[2026-03-03 06:05:11]     "exeErrorCode": 0,
[2026-03-03 06:05:11]     "exeErrorDiag": "",
[2026-03-03 06:05:11]     "pilotErrorCode": 0,
[2026-03-03 06:05:11]     "pilotErrorDiag": "",
[2026-03-03 06:05:11]  *** Listing of results directory ***
[2026-03-03 06:05:11] total 514172
[2026-03-03 06:05:11] -rw-r--r-- 1 boinc boinc    584627 Feb 27 10:20 pilot3.tar.gz
[2026-03-03 06:05:11] -rwx------ 1 boinc boinc     36322 Feb 27 10:24 runpilot2-wrapper.sh
[2026-03-03 06:05:11] -rw-r--r-- 1 boinc boinc      5111 Feb 27 10:25 queuedata.json
[2026-03-03 06:05:11] -rw-r--r-- 1 boinc boinc       100 Mar  3 01:30 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-03 06:05:11] -rwxr-xr-x 1 boinc boinc      7986 Mar  3 01:30 run_atlas
[2026-03-03 06:05:11] -rw-r--r-- 1 boinc boinc       105 Mar  3 01:30 job.xml
[2026-03-03 06:05:11] -rw-r--r-- 2 boinc boinc 289387171 Mar  3 02:32 EVNT.48220197._000074.pool.root.1
[2026-03-03 06:05:11] -rw-r--r-- 1 boinc boinc      6696 Mar  3 02:32 init_data.xml
[2026-03-03 06:05:11] -rw-r--r-- 2 boinc boinc     15845 Mar  3 02:32 start_atlas.sh
[2026-03-03 06:05:11] drwxrwx--x 2 boinc boinc      4096 Mar  3 02:32 shared
[2026-03-03 06:05:11] -rw-r--r-- 2 boinc boinc    597972 Mar  3 02:32 input.tar.gz
[2026-03-03 06:05:11] -rw-r--r-- 1 boinc boinc         0 Mar  3 02:32 boinc_lockfile
[2026-03-03 06:05:11] -rw-r--r-- 1 boinc boinc      2566 Mar  3 02:32 pandaJob.out
[2026-03-03 06:05:11] -rw------- 1 boinc boinc    997722 Mar  3 02:32 agis_schedconf.cvmfs.json
[2026-03-03 06:05:11] -rw------- 1 boinc boinc       442 Mar  3 02:33 workernode_map.json
[2026-03-03 06:05:11] drwx------ 5 boinc boinc      4096 Mar  3 02:33 pilot3
[2026-03-03 06:05:11] -rw------- 1 boinc boinc 229199516 Mar  3 05:49 HITS.48838577._001834.pool.root.1
[2026-03-03 06:05:11] -rw-r--r-- 1 boinc boinc       528 Mar  3 05:49 boinc_task_state.xml
[2026-03-03 06:05:11] -rw------- 1 boinc boinc      1028 Mar  3 05:49 memory_monitor_summary.json
[2026-03-03 06:05:11] -rw------- 1 boinc boinc   1512931 Mar  3 05:49 agis_ddmendpoints.agis.ALL.json
[2026-03-03 06:05:11] -rw------- 1 boinc boinc    355674 Mar  3 05:49 log.48838577._001834.job.log.tgz.1
[2026-03-03 06:05:11] -rw------- 1 boinc boinc      6354 Mar  3 05:49 heartbeat.json
[2026-03-03 06:05:11] -rw------- 1 boinc boinc        95 Mar  3 05:50 pilot_heartbeat.json
[2026-03-03 06:05:11] -rw------- 1 boinc boinc      5436 Mar  3 05:50 pilotlog.txt
[2026-03-03 06:05:11] -rw------- 1 boinc boinc   1640587 Mar  3 05:50 log.48838577._001834.job.log.1
[2026-03-03 06:05:11] -rw------- 1 boinc boinc       357 Mar  3 05:50 output.list
[2026-03-03 06:05:11] -rw-r--r-- 1 boinc boinc       620 Mar  3 05:50 runtime_log
[2026-03-03 06:05:11] -rw------- 1 boinc boinc   2017280 Mar  3 05:50 result.tar.gz
[2026-03-03 06:05:11] -rw-r--r-- 1 boinc boinc      9205 Mar  3 05:50 runtime_log.err
[2026-03-03 06:05:11] -rw------- 1 boinc boinc       666 Mar  3 05:50 kqTKDmBG9F9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmQq4KDmbpYC8m.diag
[2026-03-03 06:05:11] -rw-r--r-- 1 boinc boinc        27 Mar  3 06:05 wrapper_checkpoint.txt
[2026-03-03 06:05:11] -rw-r--r-- 1 boinc boinc      8192 Mar  3 06:05 boinc_mmap_file
[2026-03-03 06:05:11] -rw-r--r-- 1 boinc boinc     20849 Mar  3 06:05 stderr.txt
[2026-03-03 06:05:11] HITS file was successfully produced:
[2026-03-03 06:05:11] -rw------- 1 boinc boinc 229199516 Mar  3 05:49 shared/HITS.pool.root.1
[2026-03-03 06:05:11]  *** Contents of shared directory: ***
[2026-03-03 06:05:11] total 509016
[2026-03-03 06:05:11] -rw-r--r-- 2 boinc boinc 289387171 Mar  3 02:32 ATLAS.root_0
[2026-03-03 06:05:11] -rw-r--r-- 2 boinc boinc     15845 Mar  3 02:32 start_atlas.sh
[2026-03-03 06:05:11] -rw-r--r-- 2 boinc boinc    597972 Mar  3 02:32 input.tar.gz
[2026-03-03 06:05:11] -rw------- 1 boinc boinc 229199516 Mar  3 05:49 HITS.pool.root.1
[2026-03-03 06:05:11] -rw------- 1 boinc boinc   2017280 Mar  3 05:50 result.tar.gz
06:05:12 (2197117): run_atlas exited; CPU time 45447.501199
06:05:12 (2197117): called boinc_finish(0)

</stderr_txt>
]]>

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