Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:31:02 (3482525): wrapper (7.7.26015): starting
21:31:02 (3482525): wrapper: running run_atlas (--nthreads 4)
[2026-02-28 21:31:02] Arguments: --nthreads 4
[2026-02-28 21:31:02] Threads: 4
[2026-02-28 21:31:02] Checking for CVMFS
[2026-02-28 21:31:02] No cvmfs_config command found, will try listing directly
[2026-02-28 21:31:02] CVMFS is ok
[2026-02-28 21:31:02] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-28 21:31:02] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-28 21:31:02] Further information can be found at the LHC@home message board.
[2026-02-28 21:31:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-28 21:31:02] Checking for apptainer binary...
[2026-02-28 21:31:02] which: no apptainer in ((null))
[2026-02-28 21:31:02] apptainer is not installed, using version from CVMFS
[2026-02-28 21:31:02] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-28 21:31:02] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot96/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut15.grid.cesnet.cz
[2026-02-28 21:31:02] apptainer works
[2026-02-28 21:31:02] Set ATHENA_PROC_NUMBER=4
[2026-02-28 21:31:02] Set ATHENA_CORE_NUMBER=4
[2026-02-28 21:31:02] Starting ATLAS job with PandaID=7031562511
[2026-02-28 21:31:02] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot96/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-01 01:00:36]  *** The last 200 lines of the pilot log: ***
[2026-03-01 01:00:36] 2026-02-28 23:50:03,549 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-01 01:00:36] 2026-02-28 23:50:03,645 | INFO     | job 7031562511 has state=finished
[2026-03-01 01:00:36] 2026-02-28 23:50:03,646 | INFO     | preparing for final server update for job 7031562511 in state='finished'
[2026-03-01 01:00:36] 2026-02-28 23:50:03,646 | INFO     | reading metadata from: /scratch/boinc/var/slot96/slots/0/PanDA_Pilot-7031562511/jobReport.json
[2026-03-01 01:00:36] 2026-02-28 23:50:03,648 | INFO     | added worker_node to metadata from /scratch/boinc/var/slot96/slots/0/workernode_map.json
[2026-03-01 01:00:36] 2026-02-28 23:50:03,648 | INFO     | this job has now completed (state=finished)
[2026-03-01 01:00:36] 2026-02-28 23:50:03,649 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-01 01:00:36] 2026-02-28 23:50:03,649 | INFO     | log transfer has been attempted: DONE
[2026-03-01 01:00:36] 2026-02-28 23:50:03,649 | INFO     | job 7031562511 has finished - writing final server update
[2026-03-01 01:00:36] 2026-02-28 23:50:03,649 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_942034/.job.ad'
[2026-03-01 01:00:36] 2026-02-28 23:50:03,649 | INFO     | total number of processed events: 400 (read)
[2026-03-01 01:00:36] 2026-02-28 23:50:03,677 | INFO     | using path: /scratch/boinc/var/slot96/slots/0/PanDA_Pilot-7031562511/memory_monitor_summary.json (trf name=prmon)
[2026-03-01 01:00:36] 2026-02-28 23:50:03,678 | INFO     | extracted standard info from prmon json
[2026-03-01 01:00:36] 2026-02-28 23:50:03,678 | INFO     | extracted standard memory fields from prmon json
[2026-03-01 01:00:36] 2026-02-28 23:50:03,678 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-01 01:00:36] 2026-02-28 23:50:03,678 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-01 01:00:36] 2026-02-28 23:50:03,678 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-01 01:00:36] 2026-02-28 23:50:03,682 | INFO     | fitting pss+swap vs Time
[2026-03-01 01:00:36] 2026-02-28 23:50:03,682 | INFO     | sum of square deviations: 2299168690.0
[2026-03-01 01:00:36] 2026-02-28 23:50:03,684 | INFO     | sum of deviations: 14239960109.000004
[2026-03-01 01:00:36] 2026-02-28 23:50:03,684 | INFO     | mean x: 1772316632.0
[2026-03-01 01:00:36] 2026-02-28 23:50:03,684 | INFO     | mean y: 2343158.066666667
[2026-03-01 01:00:36] 2026-02-28 23:50:03,684 | INFO     | intersect: -10974545249.454765
[2026-03-01 01:00:36] 2026-02-28 23:50:03,685 | INFO     | chi2: 1.3637572009022316
[2026-03-01 01:00:36] 2026-02-28 23:50:03,685 | INFO     | sum of square deviations: 2126802667.5
[2026-03-01 01:00:36] 2026-02-28 23:50:03,686 | INFO     | sum of deviations: 13974537976.499998
[2026-03-01 01:00:36] 2026-02-28 23:50:03,686 | INFO     | mean x: 1772316479.5
[2026-03-01 01:00:36] 2026-02-28 23:50:03,686 | INFO     | mean y: 2342923.194736842
[2026-03-01 01:00:36] 2026-02-28 23:50:03,687 | INFO     | intersect: -11642980043.351492
[2026-03-01 01:00:36] 2026-02-28 23:50:03,687 | INFO     | chi2: 1.3646585054649392
[2026-03-01 01:00:36] 2026-02-28 23:50:03,687 | INFO     | current chi2=1.3646585054649392 (change=-0.06608981144966683 %)
[2026-03-01 01:00:36] 2026-02-28 23:50:03,687 | INFO     | right removable region: 189
[2026-03-01 01:00:36] 2026-02-28 23:50:03,687 | INFO     | sum of square deviations: 2126802667.5
[2026-03-01 01:00:36] 2026-02-28 23:50:03,689 | INFO     | sum of deviations: -10867480894.5
[2026-03-01 01:00:36] 2026-02-28 23:50:03,689 | INFO     | mean x: 1772316784.5
[2026-03-01 01:00:36] 2026-02-28 23:50:03,689 | INFO     | mean y: 2365071.110526316
[2026-03-01 01:00:36] 2026-02-28 23:50:03,689 | INFO     | intersect: 9058503230.46114
[2026-03-01 01:00:36] 2026-02-28 23:50:03,689 | INFO     | chi2: 0.015382252114633448
[2026-03-01 01:00:36] 2026-02-28 23:50:03,689 | INFO     | current chi2=0.015382252114633448 (change=98.87206812880937 %)
[2026-03-01 01:00:36] 2026-02-28 23:50:03,690 | INFO     | sum of square deviations: 1963274020.0
[2026-03-01 01:00:36] 2026-02-28 23:50:03,691 | INFO     | sum of deviations: -10927190043.0
[2026-03-01 01:00:36] 2026-02-28 23:50:03,691 | INFO     | mean x: 1772316937.0
[2026-03-01 01:00:36] 2026-02-28 23:50:03,691 | INFO     | mean y: 2365122.7027027025
[2026-03-01 01:00:36] 2026-02-28 23:50:03,691 | INFO     | intersect: 9866726281.532003
[2026-03-01 01:00:36] 2026-02-28 23:50:03,691 | INFO     | chi2: 0.01435020272659556
[2026-03-01 01:00:36] 2026-02-28 23:50:03,691 | INFO     | current chi2=0.01435020272659556 (change=6.709351662856175 %)
[2026-03-01 01:00:36] 2026-02-28 23:50:03,691 | INFO     | left removable region: 20
[2026-03-01 01:00:36] 2026-02-28 23:50:03,692 | INFO     | sum of square deviations: 1496660620.0
[2026-03-01 01:00:36] 2026-02-28 23:50:03,693 | INFO     | sum of deviations: -7665721769.999999
[2026-03-01 01:00:36] 2026-02-28 23:50:03,693 | INFO     | mean x: 1772317059.0
[2026-03-01 01:00:36] 2026-02-28 23:50:03,693 | INFO     | mean y: 2362472.9704142013
[2026-03-01 01:00:36] 2026-02-28 23:50:03,693 | INFO     | intersect: 9079964489.731352
[2026-03-01 01:00:36] 2026-02-28 23:50:03,693 | INFO     | chi2: 0.01217081700048375
[2026-03-01 01:00:36] 2026-02-28 23:50:03,693 | INFO     | current memory leak: -5.12 B/s (using 169 data points, chi2=0.01)
[2026-03-01 01:00:36] 2026-02-28 23:50:03,697 | INFO     | could have reported an average CPU frequency of 2734 MHz (10 samples)
[2026-03-01 01:00:36] 2026-02-28 23:50:03,698 | INFO     | ..............................
[2026-03-01 01:00:36] 2026-02-28 23:50:03,698 | INFO     | . Timing measurements:
[2026-03-01 01:00:36] 2026-02-28 23:50:03,698 | INFO     | . get job = 0 s
[2026-03-01 01:00:36] 2026-02-28 23:50:03,698 | INFO     | . initial setup = 9 s
[2026-03-01 01:00:36] 2026-02-28 23:50:03,698 | INFO     | . payload setup = 9 s
[2026-03-01 01:00:36] 2026-02-28 23:50:03,698 | INFO     | . stage-in = 0 s
[2026-03-01 01:00:36] 2026-02-28 23:50:03,698 | INFO     | . payload execution = 11891 s
[2026-03-01 01:00:36] 2026-02-28 23:50:03,698 | INFO     | . stage-out = 1 s
[2026-03-01 01:00:36] 2026-02-28 23:50:03,698 | INFO     | . log creation = 0 s
[2026-03-01 01:00:36] 2026-02-28 23:50:03,698 | INFO     | ..............................
[2026-03-01 01:00:36] 2026-02-28 23:50:03,800 | INFO     | 
[2026-03-01 01:00:36] 2026-02-28 23:50:03,800 | INFO     | job summary report
[2026-03-01 01:00:36] 2026-02-28 23:50:03,800 | INFO     | --------------------------------------------------
[2026-03-01 01:00:36] 2026-02-28 23:50:03,801 | INFO     | PanDA job id: 7031562511
[2026-03-01 01:00:36] 2026-02-28 23:50:03,801 | INFO     | task id: 48838615
[2026-03-01 01:00:36] 2026-02-28 23:50:03,801 | INFO     | errors: (none)
[2026-03-01 01:00:36] 2026-02-28 23:50:03,801 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-01 01:00:36] 2026-02-28 23:50:03,801 | INFO     | pilot state: finished 
[2026-03-01 01:00:36] 2026-02-28 23:50:03,801 | INFO     | transexitcode: 0
[2026-03-01 01:00:36] 2026-02-28 23:50:03,801 | INFO     | exeerrorcode: 0
[2026-03-01 01:00:36] 2026-02-28 23:50:03,801 | INFO     | exeerrordiag: 
[2026-03-01 01:00:36] 2026-02-28 23:50:03,801 | INFO     | exitcode: 0
[2026-03-01 01:00:36] 2026-02-28 23:50:03,801 | INFO     | exitmsg: OK
[2026-03-01 01:00:36] 2026-02-28 23:50:03,801 | INFO     | cpuconsumptiontime: 43045 s
[2026-03-01 01:00:36] 2026-02-28 23:50:03,801 | INFO     | nevents: 400
[2026-03-01 01:00:36] 2026-02-28 23:50:03,801 | INFO     | neventsw: 0
[2026-03-01 01:00:36] 2026-02-28 23:50:03,801 | INFO     | pid: 3536576
[2026-03-01 01:00:36] 2026-02-28 23:50:03,802 | INFO     | pgrp: 3536576
[2026-03-01 01:00:36] 2026-02-28 23:50:03,802 | INFO     | corecount: 4
[2026-03-01 01:00:36] 2026-02-28 23:50:03,802 | INFO     | event service: False
[2026-03-01 01:00:36] 2026-02-28 23:50:03,802 | INFO     | sizes: {0: 2282027, 1: 2282289, 11: 2282317, 11905: 2312154, 11906: 2321230, 11907: 2321368}
[2026-03-01 01:00:36] 2026-02-28 23:50:03,802 | INFO     | --------------------------------------------------
[2026-03-01 01:00:36] 2026-02-28 23:50:03,802 | INFO     | 
[2026-03-01 01:00:36] 2026-02-28 23:50:03,802 | INFO     | executing command: ls -lF /scratch/boinc/var/slot96/slots/0
[2026-03-01 01:00:36] 2026-02-28 23:50:03,843 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-01 01:00:36] 2026-02-28 23:50:03,843 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-01 01:00:36] 2026-02-28 23:50:03,843 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-01 01:00:36] 2026-02-28 23:50:03,844 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-01 01:00:36] 2026-02-28 23:50:03,844 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-01 01:00:36] 2026-02-28 23:50:03,844 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-01 01:00:36] 2026-02-28 23:50:03,844 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-01 01:00:36] 2026-02-28 23:50:03,844 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-01 01:00:36] 2026-02-28 23:50:03,844 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-01 01:00:36] 2026-02-28 23:50:03,844 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-01 01:00:36] 2026-02-28 23:50:03,844 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-01 01:00:36] 2026-02-28 23:50:03,844 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-01 01:00:36] 2026-02-28 23:50:03,844 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-01 01:00:36] 2026-02-28 23:50:03,844 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-01 01:00:36] 2026-02-28 23:50:03,844 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-01 01:00:36] 2026-02-28 23:50:03,844 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-01 01:00:36] 2026-02-28 23:50:03,844 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-01 01:00:36] 2026-02-28 23:50:03,845 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-01 01:00:36] 2026-02-28 23:50:03,845 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-01 01:00:36] 2026-02-28 23:50:03,845 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-01 01:00:36] 2026-02-28 23:50:03,845 | INFO     | job 7031562511 has completed (purged errors)
[2026-03-01 01:00:36] 2026-02-28 23:50:03,845 | INFO     | overall cleanup function is called
[2026-03-01 01:00:36] 2026-02-28 23:50:04,854 | INFO     | --- collectZombieJob: --- 10, [3536576]
[2026-03-01 01:00:36] 2026-02-28 23:50:04,854 | INFO     | zombie collector waiting for pid 3536576
[2026-03-01 01:00:36] 2026-02-28 23:50:04,854 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-01 01:00:36] 2026-02-28 23:50:04,854 | INFO     | collected zombie processes
[2026-03-01 01:00:36] 2026-02-28 23:50:04,854 | INFO     | will attempt to kill all subprocesses of pid=3536576
[2026-03-01 01:00:36] 2026-02-28 23:50:05,938 | INFO     | process IDs to be killed: [3536576] (in reverse order)
[2026-03-01 01:00:36] 2026-02-28 23:50:06,283 | WARNING  | found no corresponding commands to process id(s)
[2026-03-01 01:00:36] 2026-02-28 23:50:06,283 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-01 01:00:36] 2026-02-28 23:50:06,332 | INFO     | did not find any defunct processes belonging to 3536576
[2026-03-01 01:00:36] 2026-02-28 23:50:06,363 | INFO     | did not find any defunct processes belonging to 3536576
[2026-03-01 01:00:36] 2026-02-28 23:50:06,364 | INFO     | ready for new job
[2026-03-01 01:00:36] 2026-02-28 23:50:06,364 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-01 01:00:36] 2026-02-28 23:50:06,366 | INFO     | **************************************
[2026-03-01 01:00:36] 2026-02-28 23:50:06,366 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-01 01:00:36] 2026-02-28 23:50:06,366 | INFO     | **************************************
[2026-03-01 01:00:36] 2026-02-28 23:50:06,366 | INFO     | 
[2026-03-01 01:00:36] 2026-02-28 23:50:06,375 | INFO     | architecture information:
[2026-03-01 01:00:36] 2026-02-28 23:50:06,375 | INFO     | executing command: cat /etc/os-release
[2026-03-01 01:00:36] 2026-02-28 23:50:06,402 | INFO     | cat /etc/os-release:
[2026-03-01 01:00:36] NAME="CentOS Linux"
[2026-03-01 01:00:36] VERSION="7 (Core)"
[2026-03-01 01:00:36] ID="centos"
[2026-03-01 01:00:36] ID_LIKE="rhel fedora"
[2026-03-01 01:00:36] VERSION_ID="7"
[2026-03-01 01:00:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-01 01:00:36] ANSI_COLOR="0;31"
[2026-03-01 01:00:36] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-01 01:00:36] HOME_URL="https://www.centos.org/"
[2026-03-01 01:00:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-01 01:00:36] 
[2026-03-01 01:00:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-01 01:00:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-01 01:00:36] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-01 01:00:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-01 01:00:36] 
[2026-03-01 01:00:36] 2026-02-28 23:50:06,403 | INFO     | **************************************
[2026-03-01 01:00:36] 2026-02-28 23:50:06,905 | INFO     | executing command: df -mP /scratch/boinc/var/slot96/slots/0
[2026-03-01 01:00:36] 2026-02-28 23:50:06,932 | INFO     | sufficient remaining disk space (3305684074496 B)
[2026-03-01 01:00:36] 2026-02-28 23:50:06,932 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-01 01:00:36] 2026-02-28 23:50:06,932 | INFO     | current server update state: UPDATING_FINAL
[2026-03-01 01:00:36] 2026-02-28 23:50:06,932 | INFO     | update_server=False
[2026-03-01 01:00:36] 2026-02-28 23:50:06,932 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-01 01:00:36] 2026-02-28 23:50:06,933 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-01 01:00:36] 2026-02-28 23:50:06,964 | INFO     | all data control threads have been joined
[2026-03-01 01:00:36] 2026-02-28 23:50:07,516 | INFO     | all payload control threads have been joined
[2026-03-01 01:00:36] 2026-02-28 23:50:07,582 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-01 01:00:36] 2026-02-28 23:50:07,582 | INFO     | aborting loop
[2026-03-01 01:00:36] 2026-02-28 23:50:07,716 | INFO     | all job control threads have been joined
[2026-03-01 01:00:36] 2026-02-28 23:50:07,938 | INFO     | [job] retrieve thread has finished
[2026-03-01 01:00:36] 2026-02-28 23:50:07,969 | INFO     | [data] control thread has finished
[2026-03-01 01:00:36] 2026-02-28 23:50:07,980 | INFO     | [payload] validate_pre thread has finished
[2026-03-01 01:00:36] 2026-02-28 23:50:08,521 | INFO     | [payload] control thread has finished
[2026-03-01 01:00:36] 2026-02-28 23:50:08,587 | INFO     | [job] job monitor thread has finished
[2026-03-01 01:00:36] 2026-02-28 23:50:08,643 | INFO     | [job] create_data_payload thread has finished
[2026-03-01 01:00:36] 2026-02-28 23:50:08,721 | INFO     | [job] control thread has finished
[2026-03-01 01:00:36] 2026-02-28 23:50:08,737 | INFO     | [data] copytool_in thread has finished
[2026-03-01 01:00:36] 2026-02-28 23:50:08,811 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-01 01:00:36] 2026-02-28 23:50:08,889 | INFO     | [job] validate thread has finished
[2026-03-01 01:00:36] 2026-02-28 23:50:08,890 | INFO     | [payload] execute_payloads thread has finished
[2026-03-01 01:00:36] 2026-02-28 23:50:08,938 | INFO     | [data] copytool_out thread has finished
[2026-03-01 01:00:36] 2026-02-28 23:50:09,094 | INFO     | [payload] failed_post thread has finished
[2026-03-01 01:00:36] 2026-02-28 23:50:09,348 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-01 01:00:36] 2026-02-28 23:50:09,403 | INFO     | [payload] validate_post thread has finished
[2026-03-01 01:00:36] 2026-02-28 23:50:09,651 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-01 01:00:36] 2026-02-28 23:50:09,816 | INFO     | [job] queue monitor thread has finished
[2026-03-01 01:00:36] 2026-02-28 23:50:13,656 | INFO     | [data] queue_monitor thread has finished
[2026-03-01 01:00:36] 2026-02-28 23:50:36,041 | INFO     | PID=3503187 has CPU usage=11.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-03-01 01:00:36] 2026-02-28 23:50:36,041 | INFO     | .. there are 14 such processes running
[2026-03-01 01:00:36] 2026-02-28 23:50:36,041 | INFO     | found 0 job(s) in 20 queues
[2026-03-01 01:00:36] 2026-02-28 23:50:36,041 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-01 01:00:36] 2026-02-28 23:50:36,041 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-01 01:00:36] 2026-02-28 23:50:45,688 | INFO     | [monitor] cgroup control has ended
[2026-03-01 01:00:36] 2026-02-28 23:50:47,212 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22381604202304)>', '<ExcThread(monitor, started 22381361108736)>']
[2026-03-01 01:00:36] 2026-02-28 23:50:48,101 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-01 01:00:36] 2026-02-28 23:50:48,101 | INFO     | [monitor] control thread has ended
[2026-03-01 01:00:36] 2026-02-28 23:50:52,237 | INFO     | all workflow threads have been joined
[2026-03-01 01:00:36] 2026-02-28 23:50:52,237 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-01 01:00:36] 2026-02-28 23:50:52,237 | INFO     | traces error code: 0
[2026-03-01 01:00:36] 2026-02-28 23:50:52,237 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-01 01:00:36] 2026-02-28 23:50:52,418 [wrapper] ==== pilot stdout END ====
[2026-03-01 01:00:36] 2026-02-28 23:50:52,422 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-01 01:00:36] 2026-02-28 23:50:52,426 [wrapper] pilotpid: 3503187
[2026-03-01 01:00:36] 2026-02-28 23:50:52,430 [wrapper] Pilot exit status: 0
[2026-03-01 01:00:36] 2026-02-28 23:50:52,510 [wrapper] pandaids: 7031562511
[2026-03-01 01:00:36] 2026-02-28 23:50:52,755 [wrapper] cleanup supervisor_pilot 3802321 3503190
[2026-03-01 01:00:36] 2026-02-28 23:50:52,764 [wrapper] Test setup, not cleaning
[2026-03-01 01:00:36] 2026-02-28 23:50:52,768 [wrapper] apfmon messages muted
[2026-03-01 01:00:36] 2026-02-28 23:50:52,773 [wrapper] ==== wrapper stdout END ====
[2026-03-01 01:00:36] 2026-02-28 23:50:52,781 [wrapper] ==== wrapper stderr END ====
[2026-03-01 01:00:36]  *** Error codes and diagnostics ***
[2026-03-01 01:00:36]     "exeErrorCode": 0,
[2026-03-01 01:00:36]     "exeErrorDiag": "",
[2026-03-01 01:00:36]     "pilotErrorCode": 0,
[2026-03-01 01:00:36]     "pilotErrorDiag": "",
[2026-03-01 01:00:36]  *** Listing of results directory ***
[2026-03-01 01:00:36] total 461780
[2026-03-01 01:00:36] -rw-r--r-- 1 boinc boinc    584627 Feb 27 12:42 pilot3.tar.gz
[2026-03-01 01:00:36] -rwx------ 1 boinc boinc     36322 Feb 27 12:42 runpilot2-wrapper.sh
[2026-03-01 01:00:36] -rw-r--r-- 1 boinc boinc      5111 Feb 27 12:42 queuedata.json
[2026-03-01 01:00:36] -rw-r--r-- 1 boinc boinc       100 Feb 28 21:30 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-01 01:00:36] -rwxr-xr-x 1 boinc boinc      7986 Feb 28 21:30 run_atlas
[2026-03-01 01:00:36] -rw-r--r-- 1 boinc boinc       105 Feb 28 21:30 job.xml
[2026-03-01 01:00:36] -rw-r--r-- 1 boinc boinc      6697 Feb 28 21:31 init_data.xml
[2026-03-01 01:00:36] -rw-r--r-- 2 boinc boinc 268743699 Feb 28 21:31 EVNT.48343789._000055.pool.root.1
[2026-03-01 01:00:36] -rw-r--r-- 2 boinc boinc     15845 Feb 28 21:31 start_atlas.sh
[2026-03-01 01:00:36] drwxrwx--x 2 boinc boinc      4096 Feb 28 21:31 shared
[2026-03-01 01:00:36] -rw-r--r-- 2 boinc boinc    597956 Feb 28 21:31 input.tar.gz
[2026-03-01 01:00:36] -rw-r--r-- 1 boinc boinc         0 Feb 28 21:31 boinc_lockfile
[2026-03-01 01:00:36] -rw-r--r-- 1 boinc boinc      2567 Feb 28 21:31 pandaJob.out
[2026-03-01 01:00:36] -rw------- 1 boinc boinc    998790 Feb 28 21:31 agis_schedconf.cvmfs.json
[2026-03-01 01:00:36] -rw------- 1 boinc boinc       442 Feb 28 21:31 workernode_map.json
[2026-03-01 01:00:36] drwx------ 5 boinc boinc      4096 Feb 28 21:31 pilot3
[2026-03-01 01:00:36] -rw------- 1 boinc boinc 196227709 Mar  1 00:49 HITS.48838615._001379.pool.root.1
[2026-03-01 01:00:36] -rw-r--r-- 1 boinc boinc       527 Mar  1 00:49 boinc_task_state.xml
[2026-03-01 01:00:36] -rw------- 1 boinc boinc        95 Mar  1 00:49 pilot_heartbeat.json
[2026-03-01 01:00:36] -rw------- 1 boinc boinc      1022 Mar  1 00:49 memory_monitor_summary.json
[2026-03-01 01:00:36] -rw------- 1 boinc boinc   1513015 Mar  1 00:50 agis_ddmendpoints.agis.ALL.json
[2026-03-01 01:00:36] -rw------- 1 boinc boinc    376375 Mar  1 00:50 log.48838615._001379.job.log.tgz.1
[2026-03-01 01:00:36] -rw------- 1 boinc boinc      6347 Mar  1 00:50 heartbeat.json
[2026-03-01 01:00:36] -rw------- 1 boinc boinc      4832 Mar  1 00:50 pilotlog.txt
[2026-03-01 01:00:36] -rw------- 1 boinc boinc   1602675 Mar  1 00:50 log.48838615._001379.job.log.1
[2026-03-01 01:00:36] -rw------- 1 boinc boinc       357 Mar  1 00:50 output.list
[2026-03-01 01:00:36] -rw-r--r-- 1 boinc boinc       620 Mar  1 00:50 runtime_log
[2026-03-01 01:00:36] -rw------- 1 boinc boinc   1996800 Mar  1 00:50 result.tar.gz
[2026-03-01 01:00:36] -rw-r--r-- 1 boinc boinc      9205 Mar  1 00:50 runtime_log.err
[2026-03-01 01:00:36] -rw------- 1 boinc boinc       666 Mar  1 00:50 bUYKDmnPBG9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmyr4KDmxZfyNm.diag
[2026-03-01 01:00:36] -rw-r--r-- 1 boinc boinc        25 Mar  1 01:00 wrapper_checkpoint.txt
[2026-03-01 01:00:36] -rw-r--r-- 1 boinc boinc      8192 Mar  1 01:00 boinc_mmap_file
[2026-03-01 01:00:36] -rw-r--r-- 1 boinc boinc     21137 Mar  1 01:00 stderr.txt
[2026-03-01 01:00:37] HITS file was successfully produced:
[2026-03-01 01:00:37] -rw------- 1 boinc boinc 196227709 Mar  1 00:49 shared/HITS.pool.root.1
[2026-03-01 01:00:37]  *** Contents of shared directory: ***
[2026-03-01 01:00:37] total 456640
[2026-03-01 01:00:37] -rw-r--r-- 2 boinc boinc 268743699 Feb 28 21:31 ATLAS.root_0
[2026-03-01 01:00:37] -rw-r--r-- 2 boinc boinc     15845 Feb 28 21:31 start_atlas.sh
[2026-03-01 01:00:37] -rw-r--r-- 2 boinc boinc    597956 Feb 28 21:31 input.tar.gz
[2026-03-01 01:00:37] -rw------- 1 boinc boinc 196227709 Mar  1 00:49 HITS.pool.root.1
[2026-03-01 01:00:37] -rw------- 1 boinc boinc   1996800 Mar  1 00:50 result.tar.gz
01:00:38 (3482525): run_atlas exited; CPU time 43823.753487
01:00:38 (3482525): called boinc_finish(0)

</stderr_txt>
]]>

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