Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
04:56:55 (4148503): wrapper (7.7.26015): starting
04:56:55 (4148503): wrapper: running run_atlas (--nthreads 4)
[2026-03-01 04:56:55] Arguments: --nthreads 4
[2026-03-01 04:56:55] Threads: 4
[2026-03-01 04:56:55] Checking for CVMFS
[2026-03-01 04:56:55] No cvmfs_config command found, will try listing directly
[2026-03-01 04:56:55] CVMFS is ok
[2026-03-01 04:56:55] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-01 04:56:55] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-01 04:56:55] Further information can be found at the LHC@home message board.
[2026-03-01 04:56:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-01 04:56:55] Checking for apptainer binary...
[2026-03-01 04:56:55] which: no apptainer in ((null))
[2026-03-01 04:56:55] apptainer is not installed, using version from CVMFS
[2026-03-01 04:56:55] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-01 04:56:55] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot96/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut15.grid.cesnet.cz
[2026-03-01 04:56:55] apptainer works
[2026-03-01 04:56:55] Set ATHENA_PROC_NUMBER=4
[2026-03-01 04:56:55] Set ATHENA_CORE_NUMBER=4
[2026-03-01 04:56:55] Starting ATLAS job with PandaID=7031558861
[2026-03-01 04:56:55] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot96/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-01 10:10:19]  *** The last 200 lines of the pilot log: ***
[2026-03-01 10:10:19] 2026-03-01 08:10:24,195 | INFO     | mean y: 2320491.0281124497
[2026-03-01 10:10:19] 2026-03-01 08:10:24,195 | INFO     | intersect: -9158163642.156166
[2026-03-01 10:10:19] 2026-03-01 08:10:24,195 | INFO     | chi2: 2.1517507516398817
[2026-03-01 10:10:19] 2026-03-01 08:10:24,196 | INFO     | sum of square deviations: 4504504812.409848
[2026-03-01 10:10:19] 2026-03-01 08:10:24,197 | INFO     | sum of deviations: 39289743619.63115
[2026-03-01 10:10:19] 2026-03-01 08:10:24,198 | INFO     | mean x: 1772344896.5491803
[2026-03-01 10:10:19] 2026-03-01 08:10:24,198 | INFO     | mean y: 2328205.405737705
[2026-03-01 10:10:19] 2026-03-01 08:10:24,198 | INFO     | intersect: -15456635541.094343
[2026-03-01 10:10:19] 2026-03-01 08:10:24,198 | INFO     | chi2: 1.389569914439184
[2026-03-01 10:10:19] 2026-03-01 08:10:24,198 | INFO     | current chi2=1.389569914439184 (change=35.421427719722104 %)
[2026-03-01 10:10:19] 2026-03-01 08:10:24,199 | INFO     | sum of square deviations: 4233228967.397503
[2026-03-01 10:10:19] 2026-03-01 08:10:24,200 | INFO     | sum of deviations: 38217324281.17575
[2026-03-01 10:10:19] 2026-03-01 08:10:24,200 | INFO     | mean x: 1772344744.0502093
[2026-03-01 10:10:19] 2026-03-01 08:10:24,201 | INFO     | mean y: 2327602.4853556487
[2026-03-01 10:10:19] 2026-03-01 08:10:24,201 | INFO     | intersect: -15998289029.183836
[2026-03-01 10:10:19] 2026-03-01 08:10:24,201 | INFO     | chi2: 1.3900486045224076
[2026-03-01 10:10:19] 2026-03-01 08:10:24,201 | INFO     | current chi2=1.3900486045224076 (change=-0.03444879442549304 %)
[2026-03-01 10:10:19] 2026-03-01 08:10:24,201 | INFO     | right removable region: 238
[2026-03-01 10:10:19] 2026-03-01 08:10:24,202 | INFO     | sum of square deviations: 4504497492.409848
[2026-03-01 10:10:19] 2026-03-01 08:10:24,203 | INFO     | sum of deviations: -9289191746.770493
[2026-03-01 10:10:19] 2026-03-01 08:10:24,203 | INFO     | mean x: 1772345201.5491803
[2026-03-01 10:10:19] 2026-03-01 08:10:24,204 | INFO     | mean y: 2338677.6475409837
[2026-03-01 10:10:19] 2026-03-01 08:10:24,204 | INFO     | intersect: 3657275648.1754317
[2026-03-01 10:10:19] 2026-03-01 08:10:24,204 | INFO     | chi2: 0.7836234583779598
[2026-03-01 10:10:19] 2026-03-01 08:10:24,204 | INFO     | current chi2=0.7836234583779598 (change=63.58205253183955 %)
[2026-03-01 10:10:19] 2026-03-01 08:10:24,205 | INFO     | sum of square deviations: 4233214327.397503
[2026-03-01 10:10:19] 2026-03-01 08:10:24,206 | INFO     | sum of deviations: -10126617151.589956
[2026-03-01 10:10:19] 2026-03-01 08:10:24,207 | INFO     | mean x: 1772345354.0502093
[2026-03-01 10:10:19] 2026-03-01 08:10:24,207 | INFO     | mean y: 2339136.79916318
[2026-03-01 10:10:19] 2026-03-01 08:10:24,207 | INFO     | intersect: 4242110968.030684
[2026-03-01 10:10:19] 2026-03-01 08:10:24,207 | INFO     | chi2: 0.7801709031486777
[2026-03-01 10:10:19] 2026-03-01 08:10:24,207 | INFO     | current chi2=0.7801709031486777 (change=0.4405885495603514 %)
[2026-03-01 10:10:19] 2026-03-01 08:10:24,207 | INFO     | left removable region: 20
[2026-03-01 10:10:19] 2026-03-01 08:10:24,208 | INFO     | sum of square deviations: 3212524293.8394527
[2026-03-01 10:10:19] 2026-03-01 08:10:24,209 | INFO     | sum of deviations: 5443373571.018348
[2026-03-01 10:10:19] 2026-03-01 08:10:24,209 | INFO     | mean x: 1772345323.5550458
[2026-03-01 10:10:19] 2026-03-01 08:10:24,209 | INFO     | mean y: 2346464.1651376146
[2026-03-01 10:10:19] 2026-03-01 08:10:24,210 | INFO     | intersect: -3000755399.206993
[2026-03-01 10:10:19] 2026-03-01 08:10:24,210 | INFO     | chi2: 0.0004392238996309446
[2026-03-01 10:10:19] 2026-03-01 08:10:24,210 | INFO     | current memory leak: 1.69 B/s (using 218 data points, chi2=0.00)
[2026-03-01 10:10:19] 2026-03-01 08:10:24,210 | INFO     | could have reported an average CPU frequency of 2669 MHz (12 samples)
[2026-03-01 10:10:19] 2026-03-01 08:10:24,211 | INFO     | ..............................
[2026-03-01 10:10:19] 2026-03-01 08:10:24,211 | INFO     | . Timing measurements:
[2026-03-01 10:10:19] 2026-03-01 08:10:24,211 | INFO     | . get job = 0 s
[2026-03-01 10:10:19] 2026-03-01 08:10:24,211 | INFO     | . initial setup = 13 s
[2026-03-01 10:10:19] 2026-03-01 08:10:24,211 | INFO     | . payload setup = 14 s
[2026-03-01 10:10:19] 2026-03-01 08:10:24,211 | INFO     | . stage-in = 0 s
[2026-03-01 10:10:19] 2026-03-01 08:10:24,211 | INFO     | . payload execution = 15150 s
[2026-03-01 10:10:19] 2026-03-01 08:10:24,211 | INFO     | . stage-out = 1 s
[2026-03-01 10:10:19] 2026-03-01 08:10:24,212 | INFO     | . log creation = 0 s
[2026-03-01 10:10:19] 2026-03-01 08:10:24,212 | INFO     | ..............................
[2026-03-01 10:10:19] 2026-03-01 08:10:24,293 | INFO     | time since job start (15171s) is within the limit (349056.0s)
[2026-03-01 10:10:19] 2026-03-01 08:10:24,311 | INFO     | 
[2026-03-01 10:10:19] 2026-03-01 08:10:24,312 | INFO     | job summary report
[2026-03-01 10:10:19] 2026-03-01 08:10:24,312 | INFO     | --------------------------------------------------
[2026-03-01 10:10:19] 2026-03-01 08:10:24,312 | INFO     | PanDA job id: 7031558861
[2026-03-01 10:10:19] 2026-03-01 08:10:24,312 | INFO     | task id: 48838521
[2026-03-01 10:10:19] 2026-03-01 08:10:24,312 | INFO     | errors: (none)
[2026-03-01 10:10:19] 2026-03-01 08:10:24,312 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-01 10:10:19] 2026-03-01 08:10:24,312 | INFO     | pilot state: finished 
[2026-03-01 10:10:19] 2026-03-01 08:10:24,313 | INFO     | transexitcode: 0
[2026-03-01 10:10:19] 2026-03-01 08:10:24,313 | INFO     | exeerrorcode: 0
[2026-03-01 10:10:19] 2026-03-01 08:10:24,313 | INFO     | exeerrordiag: 
[2026-03-01 10:10:19] 2026-03-01 08:10:24,313 | INFO     | exitcode: 0
[2026-03-01 10:10:19] 2026-03-01 08:10:24,313 | INFO     | exitmsg: OK
[2026-03-01 10:10:19] 2026-03-01 08:10:24,313 | INFO     | cpuconsumptiontime: 45399 s
[2026-03-01 10:10:19] 2026-03-01 08:10:24,313 | INFO     | nevents: 400
[2026-03-01 10:10:19] 2026-03-01 08:10:24,313 | INFO     | neventsw: 0
[2026-03-01 10:10:19] 2026-03-01 08:10:24,313 | INFO     | pid: 5152
[2026-03-01 10:10:19] 2026-03-01 08:10:24,313 | INFO     | pgrp: 5152
[2026-03-01 10:10:19] 2026-03-01 08:10:24,313 | INFO     | corecount: 4
[2026-03-01 10:10:19] 2026-03-01 08:10:24,314 | INFO     | event service: False
[2026-03-01 10:10:19] 2026-03-01 08:10:24,314 | INFO     | sizes: {0: 2281848, 1: 2282309, 2: 2282309, 15168: 2313279, 15169: 2322493}
[2026-03-01 10:10:19] 2026-03-01 08:10:24,314 | INFO     | --------------------------------------------------
[2026-03-01 10:10:19] 2026-03-01 08:10:24,314 | INFO     | 
[2026-03-01 10:10:19] 2026-03-01 08:10:24,314 | INFO     | executing command: ls -lF /scratch/boinc/var/slot96/slots/0
[2026-03-01 10:10:19] 2026-03-01 08:10:24,344 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-01 10:10:19] 2026-03-01 08:10:24,344 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-01 10:10:19] 2026-03-01 08:10:24,344 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-01 10:10:19] 2026-03-01 08:10:24,344 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-01 10:10:19] 2026-03-01 08:10:24,344 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-01 10:10:19] 2026-03-01 08:10:24,345 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-01 10:10:19] 2026-03-01 08:10:24,345 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-01 10:10:19] 2026-03-01 08:10:24,345 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-01 10:10:19] 2026-03-01 08:10:24,345 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-01 10:10:19] 2026-03-01 08:10:24,345 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-01 10:10:19] 2026-03-01 08:10:24,345 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-01 10:10:19] 2026-03-01 08:10:24,345 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-01 10:10:19] 2026-03-01 08:10:24,345 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-01 10:10:19] 2026-03-01 08:10:24,345 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-01 10:10:19] 2026-03-01 08:10:24,345 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-01 10:10:19] 2026-03-01 08:10:24,345 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-01 10:10:19] 2026-03-01 08:10:24,346 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-01 10:10:19] 2026-03-01 08:10:24,346 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-01 10:10:19] 2026-03-01 08:10:24,346 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-01 10:10:19] 2026-03-01 08:10:24,346 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-01 10:10:19] 2026-03-01 08:10:24,346 | INFO     | job 7031558861 has completed (purged errors)
[2026-03-01 10:10:19] 2026-03-01 08:10:24,346 | INFO     | overall cleanup function is called
[2026-03-01 10:10:19] 2026-03-01 08:10:25,355 | INFO     | --- collectZombieJob: --- 10, [5152]
[2026-03-01 10:10:19] 2026-03-01 08:10:25,355 | INFO     | zombie collector waiting for pid 5152
[2026-03-01 10:10:19] 2026-03-01 08:10:25,355 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-01 10:10:19] 2026-03-01 08:10:25,355 | INFO     | collected zombie processes
[2026-03-01 10:10:19] 2026-03-01 08:10:25,355 | INFO     | will attempt to kill all subprocesses of pid=5152
[2026-03-01 10:10:19] 2026-03-01 08:10:26,302 | INFO     | process IDs to be killed: [5152] (in reverse order)
[2026-03-01 10:10:19] 2026-03-01 08:10:26,661 | WARNING  | found no corresponding commands to process id(s)
[2026-03-01 10:10:19] 2026-03-01 08:10:26,661 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-01 10:10:19] 2026-03-01 08:10:26,696 | INFO     | did not find any defunct processes belonging to 5152
[2026-03-01 10:10:19] 2026-03-01 08:10:26,729 | INFO     | did not find any defunct processes belonging to 5152
[2026-03-01 10:10:19] 2026-03-01 08:10:26,729 | INFO     | ready for new job
[2026-03-01 10:10:19] 2026-03-01 08:10:26,729 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-01 10:10:19] 2026-03-01 08:10:26,731 | INFO     | **************************************
[2026-03-01 10:10:19] 2026-03-01 08:10:26,732 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-01 10:10:19] 2026-03-01 08:10:26,732 | INFO     | **************************************
[2026-03-01 10:10:19] 2026-03-01 08:10:26,732 | INFO     | 
[2026-03-01 10:10:19] 2026-03-01 08:10:26,740 | INFO     | architecture information:
[2026-03-01 10:10:19] 2026-03-01 08:10:26,741 | INFO     | executing command: cat /etc/os-release
[2026-03-01 10:10:19] 2026-03-01 08:10:26,768 | INFO     | cat /etc/os-release:
[2026-03-01 10:10:19] NAME="CentOS Linux"
[2026-03-01 10:10:19] VERSION="7 (Core)"
[2026-03-01 10:10:19] ID="centos"
[2026-03-01 10:10:19] ID_LIKE="rhel fedora"
[2026-03-01 10:10:19] VERSION_ID="7"
[2026-03-01 10:10:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-01 10:10:19] ANSI_COLOR="0;31"
[2026-03-01 10:10:19] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-01 10:10:19] HOME_URL="https://www.centos.org/"
[2026-03-01 10:10:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-01 10:10:19] 
[2026-03-01 10:10:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-01 10:10:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-01 10:10:19] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-01 10:10:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-01 10:10:19] 
[2026-03-01 10:10:19] 2026-03-01 08:10:26,769 | INFO     | **************************************
[2026-03-01 10:10:19] 2026-03-01 08:10:27,271 | INFO     | executing command: df -mP /scratch/boinc/var/slot96/slots/0
[2026-03-01 10:10:19] 2026-03-01 08:10:27,294 | INFO     | sufficient remaining disk space (3318071951360 B)
[2026-03-01 10:10:19] 2026-03-01 08:10:27,294 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-01 10:10:19] 2026-03-01 08:10:27,294 | INFO     | current server update state: UPDATING_FINAL
[2026-03-01 10:10:19] 2026-03-01 08:10:27,295 | INFO     | update_server=False
[2026-03-01 10:10:19] 2026-03-01 08:10:27,295 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-01 10:10:19] 2026-03-01 08:10:27,295 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-01 10:10:19] 2026-03-01 08:10:27,302 | INFO     | all data control threads have been joined
[2026-03-01 10:10:19] 2026-03-01 08:10:27,820 | INFO     | all job control threads have been joined
[2026-03-01 10:10:19] 2026-03-01 08:10:28,148 | INFO     | all payload control threads have been joined
[2026-03-01 10:10:19] 2026-03-01 08:10:28,300 | INFO     | [job] retrieve thread has finished
[2026-03-01 10:10:19] 2026-03-01 08:10:28,307 | INFO     | [data] control thread has finished
[2026-03-01 10:10:19] 2026-03-01 08:10:28,481 | INFO     | [job] validate thread has finished
[2026-03-01 10:10:19] 2026-03-01 08:10:28,602 | INFO     | [job] create_data_payload thread has finished
[2026-03-01 10:10:19] 2026-03-01 08:10:28,655 | INFO     | [payload] validate_post thread has finished
[2026-03-01 10:10:19] 2026-03-01 08:10:28,825 | INFO     | [job] control thread has finished
[2026-03-01 10:10:19] 2026-03-01 08:10:28,836 | INFO     | [payload] failed_post thread has finished
[2026-03-01 10:10:19] 2026-03-01 08:10:29,019 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-01 10:10:19] 2026-03-01 08:10:29,153 | INFO     | [payload] control thread has finished
[2026-03-01 10:10:19] 2026-03-01 08:10:29,172 | INFO     | [payload] validate_pre thread has finished
[2026-03-01 10:10:19] 2026-03-01 08:10:29,175 | INFO     | [data] copytool_in thread has finished
[2026-03-01 10:10:19] 2026-03-01 08:10:29,300 | INFO     | [data] copytool_out thread has finished
[2026-03-01 10:10:19] 2026-03-01 08:10:29,322 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-01 10:10:19] 2026-03-01 08:10:29,787 | INFO     | [payload] execute_payloads thread has finished
[2026-03-01 10:10:19] 2026-03-01 08:10:30,156 | WARNING  | process 5152 can no longer be monitored (due to stat problems) - aborting
[2026-03-01 10:10:19] 2026-03-01 08:10:30,171 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-01 10:10:19] 2026-03-01 08:10:30,327 | INFO     | [job] queue monitor thread has finished
[2026-03-01 10:10:19] 2026-03-01 08:10:30,800 | INFO     | using path: /scratch/boinc/var/slot96/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-01 10:10:19] 2026-03-01 08:10:30,801 | INFO     | using path: /scratch/boinc/var/slot96/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-01 10:10:19] 2026-03-01 08:10:30,802 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-03-01 10:10:19] 2026-03-01 08:10:30,802 | WARNING  | maxPSS not found in memory monitor output
[2026-03-01 10:10:19] 2026-03-01 08:10:30,802 | INFO     | skipping file size check of payload stdout file (/scratch/boinc/var/slot96/slots/0/PanDA_Pilot-7031558861/payload.stdout) since it has not been created yet
[2026-03-01 10:10:19] 2026-03-01 08:10:30,802 | INFO     | executing command: df -mP /scratch/boinc/var/slot96/slots/0
[2026-03-01 10:10:19] 2026-03-01 08:10:30,825 | INFO     | sufficient remaining disk space (3318062514176 B)
[2026-03-01 10:10:19] 2026-03-01 08:10:30,826 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-03-01 10:10:19] 2026-03-01 08:10:30,826 | INFO     | output file size check: skipping output file /scratch/boinc/var/slot96/slots/0/PanDA_Pilot-7031558861/HITS.48838521._000863.pool.root.1 since it does not exist
[2026-03-01 10:10:19] 2026-03-01 08:10:31,699 | INFO     | number of running child processes to parent process 5152: 1
[2026-03-01 10:10:19] 2026-03-01 08:10:31,699 | INFO     | maximum number of monitored processes: 6
[2026-03-01 10:10:19] 2026-03-01 08:10:31,699 | INFO     | aborting job monitoring since job object (job id=7031558861) has expired
[2026-03-01 10:10:19] 2026-03-01 08:10:31,700 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-01 10:10:19] 2026-03-01 08:10:31,700 | INFO     | will abort loop
[2026-03-01 10:10:19] 2026-03-01 08:10:32,705 | INFO     | [job] job monitor thread has finished
[2026-03-01 10:10:19] 2026-03-01 08:10:34,177 | INFO     | [data] queue_monitor thread has finished
[2026-03-01 10:10:19] 2026-03-01 08:10:58,411 | INFO     | PID=4171821 has CPU usage=14.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-03-01 10:10:19] 2026-03-01 08:10:58,411 | INFO     | .. there are 17 such processes running
[2026-03-01 10:10:19] 2026-03-01 08:10:58,412 | INFO     | found 0 job(s) in 20 queues
[2026-03-01 10:10:19] 2026-03-01 08:10:58,412 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-01 10:10:19] 2026-03-01 08:10:58,412 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-01 10:10:19] 2026-03-01 08:10:58,905 | INFO     | [monitor] cgroup control has ended
[2026-03-01 10:10:19] 2026-03-01 08:10:58,956 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22534183307072)>', '<ExcThread(monitor, started 22533864650496)>']
[2026-03-01 10:10:19] 2026-03-01 08:10:59,417 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-01 10:10:19] 2026-03-01 08:10:59,417 | INFO     | [monitor] control thread has ended
[2026-03-01 10:10:19] 2026-03-01 08:11:03,981 | INFO     | all workflow threads have been joined
[2026-03-01 10:10:19] 2026-03-01 08:11:03,981 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-01 10:10:19] 2026-03-01 08:11:03,981 | INFO     | traces error code: 0
[2026-03-01 10:10:19] 2026-03-01 08:11:03,981 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-01 10:10:19] 2026-03-01 08:11:04,153 [wrapper] ==== pilot stdout END ====
[2026-03-01 10:10:19] 2026-03-01 08:11:04,157 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-01 10:10:19] 2026-03-01 08:11:04,160 [wrapper] pilotpid: 4171821
[2026-03-01 10:10:19] 2026-03-01 08:11:04,163 [wrapper] Pilot exit status: 0
[2026-03-01 10:10:19] 2026-03-01 08:11:04,178 [wrapper] pandaids: 7031558861
[2026-03-01 10:10:19] 2026-03-01 08:11:04,386 [wrapper] cleanup supervisor_pilot  360193 4171822
[2026-03-01 10:10:19] 2026-03-01 08:11:04,389 [wrapper] Test setup, not cleaning
[2026-03-01 10:10:19] 2026-03-01 08:11:04,392 [wrapper] apfmon messages muted
[2026-03-01 10:10:19] 2026-03-01 08:11:04,395 [wrapper] ==== wrapper stdout END ====
[2026-03-01 10:10:19] 2026-03-01 08:11:04,398 [wrapper] ==== wrapper stderr END ====
[2026-03-01 10:10:19]  *** Error codes and diagnostics ***
[2026-03-01 10:10:19]     "exeErrorCode": 0,
[2026-03-01 10:10:19]     "exeErrorDiag": "",
[2026-03-01 10:10:19]     "pilotErrorCode": 0,
[2026-03-01 10:10:19]     "pilotErrorDiag": "",
[2026-03-01 10:10:19]  *** Listing of results directory ***
[2026-03-01 10:10:19] total 470620
[2026-03-01 10:10:19] -rw-r--r-- 1 boinc boinc    584627 Feb 27 12:42 pilot3.tar.gz
[2026-03-01 10:10:19] -rwx------ 1 boinc boinc     36322 Feb 27 12:42 runpilot2-wrapper.sh
[2026-03-01 10:10:19] -rw-r--r-- 1 boinc boinc      5111 Feb 27 12:42 queuedata.json
[2026-03-01 10:10:19] -rw-r--r-- 1 boinc boinc       100 Mar  1 04:56 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-01 10:10:19] -rwxr-xr-x 1 boinc boinc      7986 Mar  1 04:56 run_atlas
[2026-03-01 10:10:19] -rw-r--r-- 1 boinc boinc       105 Mar  1 04:56 job.xml
[2026-03-01 10:10:19] -rw-r--r-- 2 boinc boinc 269872025 Mar  1 04:56 EVNT.48343683._000038.pool.root.1
[2026-03-01 10:10:19] -rw-r--r-- 1 boinc boinc      6697 Mar  1 04:56 init_data.xml
[2026-03-01 10:10:19] -rw-r--r-- 2 boinc boinc     15845 Mar  1 04:56 start_atlas.sh
[2026-03-01 10:10:19] drwxrwx--x 2 boinc boinc      4096 Mar  1 04:56 shared
[2026-03-01 10:10:19] -rw-r--r-- 2 boinc boinc    597952 Mar  1 04:56 input.tar.gz
[2026-03-01 10:10:19] -rw-r--r-- 1 boinc boinc         0 Mar  1 04:56 boinc_lockfile
[2026-03-01 10:10:19] -rw-r--r-- 1 boinc boinc      2561 Mar  1 04:56 pandaJob.out
[2026-03-01 10:10:19] -rw------- 1 boinc boinc    998790 Mar  1 04:57 agis_schedconf.cvmfs.json
[2026-03-01 10:10:19] -rw------- 1 boinc boinc       443 Mar  1 04:57 workernode_map.json
[2026-03-01 10:10:19] drwx------ 5 boinc boinc      4096 Mar  1 04:57 pilot3
[2026-03-01 10:10:19] -rw------- 1 boinc boinc 203417659 Mar  1 09:09 HITS.48838521._000863.pool.root.1
[2026-03-01 10:10:19] -rw-r--r-- 1 boinc boinc       529 Mar  1 09:09 boinc_task_state.xml
[2026-03-01 10:10:19] -rw------- 1 boinc boinc      1028 Mar  1 09:10 memory_monitor_summary.json
[2026-03-01 10:10:19] -rw------- 1 boinc boinc   1513015 Mar  1 09:10 agis_ddmendpoints.agis.ALL.json
[2026-03-01 10:10:19] -rw------- 1 boinc boinc    405344 Mar  1 09:10 log.48838521._000863.job.log.tgz.1
[2026-03-01 10:10:19] -rw------- 1 boinc boinc      6348 Mar  1 09:10 heartbeat.json
[2026-03-01 10:10:19] -rw------- 1 boinc boinc        95 Mar  1 09:10 pilot_heartbeat.json
[2026-03-01 10:10:19] -rw------- 1 boinc boinc      6368 Mar  1 09:11 pilotlog.txt
[2026-03-01 10:10:19] -rw------- 1 boinc boinc   1944713 Mar  1 09:11 log.48838521._000863.job.log.1
[2026-03-01 10:10:19] -rw------- 1 boinc boinc       357 Mar  1 09:11 output.list
[2026-03-01 10:10:19] -rw-r--r-- 1 boinc boinc       620 Mar  1 09:11 runtime_log
[2026-03-01 10:10:19] -rw------- 1 boinc boinc   2365440 Mar  1 09:11 result.tar.gz
[2026-03-01 10:10:19] -rw------- 1 boinc boinc       666 Mar  1 09:11 vrFODmmPBG9n9Rq4apOajLDm4fhM0noT9bVooX4SDmU42KDmxyhvqn.diag
[2026-03-01 10:10:19] -rw-r--r-- 1 boinc boinc      9205 Mar  1 09:11 runtime_log.err
[2026-03-01 10:10:19] -rw-r--r-- 1 boinc boinc        26 Mar  1 10:10 wrapper_checkpoint.txt
[2026-03-01 10:10:19] -rw-r--r-- 1 boinc boinc      8192 Mar  1 10:10 boinc_mmap_file
[2026-03-01 10:10:19] -rw-r--r-- 1 boinc boinc     21319 Mar  1 10:10 stderr.txt
[2026-03-01 10:10:19] HITS file was successfully produced:
[2026-03-01 10:10:19] -rw------- 1 boinc boinc 203417659 Mar  1 09:09 shared/HITS.pool.root.1
[2026-03-01 10:10:19]  *** Contents of shared directory: ***
[2026-03-01 10:10:19] total 465120
[2026-03-01 10:10:19] -rw-r--r-- 2 boinc boinc 269872025 Mar  1 04:56 ATLAS.root_0
[2026-03-01 10:10:19] -rw-r--r-- 2 boinc boinc     15845 Mar  1 04:56 start_atlas.sh
[2026-03-01 10:10:19] -rw-r--r-- 2 boinc boinc    597952 Mar  1 04:56 input.tar.gz
[2026-03-01 10:10:19] -rw------- 1 boinc boinc 203417659 Mar  1 09:09 HITS.pool.root.1
[2026-03-01 10:10:19] -rw------- 1 boinc boinc   2365440 Mar  1 09:11 result.tar.gz
10:10:20 (4148503): run_atlas exited; CPU time 46451.110886
10:10:20 (4148503): called boinc_finish(0)

</stderr_txt>
]]>

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