Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
13:24:46 (2652546): wrapper (7.7.26015): starting
13:24:46 (2652546): wrapper: running run_atlas (--nthreads 4)
[2026-02-28 13:24:46] Arguments: --nthreads 4
[2026-02-28 13:24:46] Threads: 4
[2026-02-28 13:24:46] Checking for CVMFS
[2026-02-28 13:24:46] No cvmfs_config command found, will try listing directly
[2026-02-28 13:24:46] CVMFS is ok
[2026-02-28 13:24:46] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-28 13:24:46] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-28 13:24:46] Further information can be found at the LHC@home message board.
[2026-02-28 13:24:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-28 13:24:46] Checking for apptainer binary...
[2026-02-28 13:24:46] which: no apptainer in ((null))
[2026-02-28 13:24:46] apptainer is not installed, using version from CVMFS
[2026-02-28 13:24:46] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-28 13:24:46] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot68/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut15.grid.cesnet.cz
[2026-02-28 13:24:46] apptainer works
[2026-02-28 13:24:46] Set ATHENA_PROC_NUMBER=4
[2026-02-28 13:24:46] Set ATHENA_CORE_NUMBER=4
[2026-02-28 13:24:46] Starting ATLAS job with PandaID=7031275959
[2026-02-28 13:24:46] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot68/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-28 16:06:27]  *** The last 200 lines of the pilot log: ***
[2026-02-28 16:06:27] 2026-02-28 15:05:44,907 | INFO     | mean y: 2344440.85443038
[2026-02-28 16:06:27] 2026-02-28 15:05:44,907 | INFO     | intersect: 15513068992.658918
[2026-02-28 16:06:27] 2026-02-28 15:05:44,907 | INFO     | chi2: 2.0699312322466294
[2026-02-28 16:06:27] 2026-02-28 15:05:44,908 | INFO     | sum of square deviations: 1110539892.0
[2026-02-28 16:06:27] 2026-02-28 15:05:44,909 | INFO     | sum of deviations: -113865161.9999995
[2026-02-28 16:06:27] 2026-02-28 15:05:44,909 | INFO     | mean x: 1772286170.0
[2026-02-28 16:06:27] 2026-02-28 15:05:44,909 | INFO     | mean y: 2358442.3333333335
[2026-02-28 16:06:27] 2026-02-28 15:05:44,909 | INFO     | intersect: 184073348.12926906
[2026-02-28 16:06:27] 2026-02-28 15:05:44,909 | INFO     | chi2: 1.217653631212099
[2026-02-28 16:06:27] 2026-02-28 15:05:44,909 | INFO     | current chi2=1.217653631212099 (change=41.17419882154727 %)
[2026-02-28 16:06:27] 2026-02-28 15:05:44,909 | INFO     | sum of square deviations: 1005179777.0
[2026-02-28 16:06:27] 2026-02-28 15:05:44,910 | INFO     | sum of deviations: 21797038.50000013
[2026-02-28 16:06:27] 2026-02-28 15:05:44,910 | INFO     | mean x: 1772286017.5
[2026-02-28 16:06:27] 2026-02-28 15:05:44,910 | INFO     | mean y: 2358638.7635135134
[2026-02-28 16:06:27] 2026-02-28 15:05:44,911 | INFO     | intersect: -36072881.0903319
[2026-02-28 16:06:27] 2026-02-28 15:05:44,911 | INFO     | chi2: 1.2180043558494373
[2026-02-28 16:06:27] 2026-02-28 15:05:44,911 | INFO     | current chi2=1.2180043558494373 (change=-0.028803317162476163 %)
[2026-02-28 16:06:27] 2026-02-28 15:05:44,911 | INFO     | right removable region: 147
[2026-02-28 16:06:27] 2026-02-28 15:05:44,911 | INFO     | sum of square deviations: 1110539892.0
[2026-02-28 16:06:27] 2026-02-28 15:05:44,912 | INFO     | sum of deviations: -24794905948.0
[2026-02-28 16:06:27] 2026-02-28 15:05:44,912 | INFO     | mean x: 1772286475.0
[2026-02-28 16:06:27] 2026-02-28 15:05:44,912 | INFO     | mean y: 2363058.3790849675
[2026-02-28 16:06:27] 2026-02-28 15:05:44,912 | INFO     | intersect: 39572014519.884125
[2026-02-28 16:06:27] 2026-02-28 15:05:44,913 | INFO     | chi2: 0.9207965803755079
[2026-02-28 16:06:27] 2026-02-28 15:05:44,913 | INFO     | current chi2=0.9207965803755079 (change=55.51559558932264 %)
[2026-02-28 16:06:27] 2026-02-28 15:05:44,913 | INFO     | sum of square deviations: 1005179777.0
[2026-02-28 16:06:27] 2026-02-28 15:05:44,914 | INFO     | sum of deviations: -19695015588.0
[2026-02-28 16:06:27] 2026-02-28 15:05:44,914 | INFO     | mean x: 1772286627.5
[2026-02-28 16:06:27] 2026-02-28 15:05:44,914 | INFO     | mean y: 2355722.810810811
[2026-02-28 16:06:27] 2026-02-28 15:05:44,914 | INFO     | intersect: 34727698943.694626
[2026-02-28 16:06:27] 2026-02-28 15:05:44,914 | INFO     | chi2: 0.8953392149653356
[2026-02-28 16:06:27] 2026-02-28 15:05:44,914 | INFO     | current chi2=0.8953392149653356 (change=2.7647111156506017 %)
[2026-02-28 16:06:27] 2026-02-28 15:05:44,914 | INFO     | left removable region: 20
[2026-02-28 16:06:27] 2026-02-28 15:05:44,915 | INFO     | sum of square deviations: 635130048.0
[2026-02-28 16:06:27] 2026-02-28 15:05:44,915 | INFO     | sum of deviations: -5261192538.0
[2026-02-28 16:06:27] 2026-02-28 15:05:44,915 | INFO     | mean x: 1772286597.0
[2026-02-28 16:06:27] 2026-02-28 15:05:44,915 | INFO     | mean y: 2364902.937007874
[2026-02-28 16:06:27] 2026-02-28 15:05:44,915 | INFO     | intersect: 14683359840.423908
[2026-02-28 16:06:27] 2026-02-28 15:05:44,916 | INFO     | chi2: 0.007783880680772756
[2026-02-28 16:06:27] 2026-02-28 15:05:44,916 | INFO     | current memory leak: -8.28 B/s (using 127 data points, chi2=0.01)
[2026-02-28 16:06:27] 2026-02-28 15:05:44,916 | INFO     | could have reported an average CPU frequency of 2761 MHz (9 samples)
[2026-02-28 16:06:27] 2026-02-28 15:05:44,916 | INFO     | ..............................
[2026-02-28 16:06:27] 2026-02-28 15:05:44,917 | INFO     | . Timing measurements:
[2026-02-28 16:06:27] 2026-02-28 15:05:44,917 | INFO     | . get job = 0 s
[2026-02-28 16:06:27] 2026-02-28 15:05:44,917 | INFO     | . initial setup = 7 s
[2026-02-28 16:06:27] 2026-02-28 15:05:44,917 | INFO     | . payload setup = 8 s
[2026-02-28 16:06:27] 2026-02-28 15:05:44,917 | INFO     | . stage-in = 0 s
[2026-02-28 16:06:27] 2026-02-28 15:05:44,917 | INFO     | . payload execution = 9610 s
[2026-02-28 16:06:27] 2026-02-28 15:05:44,917 | INFO     | . stage-out = 0 s
[2026-02-28 16:06:27] 2026-02-28 15:05:44,917 | INFO     | . log creation = 0 s
[2026-02-28 16:06:27] 2026-02-28 15:05:44,917 | INFO     | ..............................
[2026-02-28 16:06:27] 2026-02-28 15:05:45,234 | INFO     | 
[2026-02-28 16:06:27] 2026-02-28 15:05:45,234 | INFO     | job summary report
[2026-02-28 16:06:27] 2026-02-28 15:05:45,234 | INFO     | --------------------------------------------------
[2026-02-28 16:06:27] 2026-02-28 15:05:45,234 | INFO     | PanDA job id: 7031275959
[2026-02-28 16:06:27] 2026-02-28 15:05:45,234 | INFO     | task id: 48838521
[2026-02-28 16:06:27] 2026-02-28 15:05:45,234 | INFO     | errors: (none)
[2026-02-28 16:06:27] 2026-02-28 15:05:45,234 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-28 16:06:27] 2026-02-28 15:05:45,235 | INFO     | pilot state: finished 
[2026-02-28 16:06:27] 2026-02-28 15:05:45,235 | INFO     | transexitcode: 0
[2026-02-28 16:06:27] 2026-02-28 15:05:45,235 | INFO     | exeerrorcode: 0
[2026-02-28 16:06:27] 2026-02-28 15:05:45,235 | INFO     | exeerrordiag: 
[2026-02-28 16:06:27] 2026-02-28 15:05:45,235 | INFO     | exitcode: 0
[2026-02-28 16:06:27] 2026-02-28 15:05:45,235 | INFO     | exitmsg: OK
[2026-02-28 16:06:27] 2026-02-28 15:05:45,235 | INFO     | cpuconsumptiontime: 36715 s
[2026-02-28 16:06:27] 2026-02-28 15:05:45,235 | INFO     | nevents: 400
[2026-02-28 16:06:27] 2026-02-28 15:05:45,235 | INFO     | neventsw: 0
[2026-02-28 16:06:27] 2026-02-28 15:05:45,235 | INFO     | pid: 2662459
[2026-02-28 16:06:27] 2026-02-28 15:05:45,235 | INFO     | pgrp: 2662459
[2026-02-28 16:06:27] 2026-02-28 15:05:45,235 | INFO     | corecount: 4
[2026-02-28 16:06:27] 2026-02-28 15:05:45,236 | INFO     | event service: False
[2026-02-28 16:06:27] 2026-02-28 15:05:45,236 | INFO     | sizes: {0: 2282019, 1: 2282281, 11: 2282309, 9622: 2310974, 9623: 2319994, 9625: 2320050, 9626: 2320436}
[2026-02-28 16:06:27] 2026-02-28 15:05:45,239 | INFO     | --------------------------------------------------
[2026-02-28 16:06:27] 2026-02-28 15:05:45,239 | INFO     | 
[2026-02-28 16:06:27] 2026-02-28 15:05:45,239 | INFO     | executing command: ls -lF /scratch/boinc/var/slot68/slots/0
[2026-02-28 16:06:27] 2026-02-28 15:05:45,268 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-28 16:06:27] 2026-02-28 15:05:45,268 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-28 16:06:27] 2026-02-28 15:05:45,268 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-28 16:06:27] 2026-02-28 15:05:45,268 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-28 16:06:27] 2026-02-28 15:05:45,269 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-28 16:06:27] 2026-02-28 15:05:45,269 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-28 16:06:27] 2026-02-28 15:05:45,269 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-28 16:06:27] 2026-02-28 15:05:45,269 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-28 16:06:27] 2026-02-28 15:05:45,269 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-28 16:06:27] 2026-02-28 15:05:45,269 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-28 16:06:27] 2026-02-28 15:05:45,269 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-28 16:06:27] 2026-02-28 15:05:45,269 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-28 16:06:27] 2026-02-28 15:05:45,269 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-28 16:06:27] 2026-02-28 15:05:45,269 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-28 16:06:27] 2026-02-28 15:05:45,270 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-28 16:06:27] 2026-02-28 15:05:45,270 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-28 16:06:27] 2026-02-28 15:05:45,270 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-28 16:06:27] 2026-02-28 15:05:45,270 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-28 16:06:27] 2026-02-28 15:05:45,270 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-28 16:06:27] 2026-02-28 15:05:45,270 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-28 16:06:27] 2026-02-28 15:05:45,270 | INFO     | job 7031275959 has completed (purged errors)
[2026-02-28 16:06:27] 2026-02-28 15:05:45,270 | INFO     | overall cleanup function is called
[2026-02-28 16:06:27] 2026-02-28 15:05:46,279 | INFO     | --- collectZombieJob: --- 10, [2662459]
[2026-02-28 16:06:27] 2026-02-28 15:05:46,279 | INFO     | zombie collector waiting for pid 2662459
[2026-02-28 16:06:27] 2026-02-28 15:05:46,279 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-28 16:06:27] 2026-02-28 15:05:46,279 | INFO     | collected zombie processes
[2026-02-28 16:06:27] 2026-02-28 15:05:46,279 | INFO     | will attempt to kill all subprocesses of pid=2662459
[2026-02-28 16:06:27] 2026-02-28 15:05:46,847 | INFO     | process IDs to be killed: [2662459] (in reverse order)
[2026-02-28 16:06:27] 2026-02-28 15:05:47,099 | WARNING  | found no corresponding commands to process id(s)
[2026-02-28 16:06:27] 2026-02-28 15:05:47,099 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-28 16:06:27] 2026-02-28 15:05:47,120 | INFO     | did not find any defunct processes belonging to 2662459
[2026-02-28 16:06:27] 2026-02-28 15:05:47,136 | INFO     | did not find any defunct processes belonging to 2662459
[2026-02-28 16:06:27] 2026-02-28 15:05:47,136 | INFO     | ready for new job
[2026-02-28 16:06:27] 2026-02-28 15:05:47,136 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-28 16:06:27] 2026-02-28 15:05:47,138 | INFO     | **************************************
[2026-02-28 16:06:27] 2026-02-28 15:05:47,138 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-28 16:06:27] 2026-02-28 15:05:47,139 | INFO     | **************************************
[2026-02-28 16:06:27] 2026-02-28 15:05:47,139 | INFO     | 
[2026-02-28 16:06:27] 2026-02-28 15:05:47,146 | INFO     | architecture information:
[2026-02-28 16:06:27] 2026-02-28 15:05:47,147 | INFO     | executing command: cat /etc/os-release
[2026-02-28 16:06:27] 2026-02-28 15:05:47,170 | INFO     | cat /etc/os-release:
[2026-02-28 16:06:27] NAME="CentOS Linux"
[2026-02-28 16:06:27] VERSION="7 (Core)"
[2026-02-28 16:06:27] ID="centos"
[2026-02-28 16:06:27] ID_LIKE="rhel fedora"
[2026-02-28 16:06:27] VERSION_ID="7"
[2026-02-28 16:06:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-28 16:06:27] ANSI_COLOR="0;31"
[2026-02-28 16:06:27] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-28 16:06:27] HOME_URL="https://www.centos.org/"
[2026-02-28 16:06:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-28 16:06:27] 
[2026-02-28 16:06:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-28 16:06:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-28 16:06:27] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-28 16:06:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-28 16:06:27] 
[2026-02-28 16:06:27] 2026-02-28 15:05:47,171 | INFO     | **************************************
[2026-02-28 16:06:27] 2026-02-28 15:05:47,674 | INFO     | executing command: df -mP /scratch/boinc/var/slot68/slots/0
[2026-02-28 16:06:27] 2026-02-28 15:05:47,700 | INFO     | sufficient remaining disk space (3306649812992 B)
[2026-02-28 16:06:27] 2026-02-28 15:05:47,701 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-28 16:06:27] 2026-02-28 15:05:47,701 | INFO     | current server update state: UPDATING_FINAL
[2026-02-28 16:06:27] 2026-02-28 15:05:47,701 | INFO     | update_server=False
[2026-02-28 16:06:27] 2026-02-28 15:05:47,701 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-28 16:06:27] 2026-02-28 15:05:47,867 | INFO     | all payload control threads have been joined
[2026-02-28 16:06:27] 2026-02-28 15:05:47,881 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-28 16:06:27] 2026-02-28 15:05:47,890 | WARNING  | process 2662459 can no longer be monitored (due to stat problems) - aborting
[2026-02-28 16:06:27] 2026-02-28 15:05:48,365 | INFO     | using path: /scratch/boinc/var/slot68/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-02-28 16:06:27] 2026-02-28 15:05:48,366 | INFO     | using path: /scratch/boinc/var/slot68/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-02-28 16:06:27] 2026-02-28 15:05:48,366 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-02-28 16:06:27] 2026-02-28 15:05:48,367 | WARNING  | maxPSS not found in memory monitor output
[2026-02-28 16:06:27] 2026-02-28 15:05:48,367 | INFO     | skipping file size check of payload stdout file (/scratch/boinc/var/slot68/slots/0/PanDA_Pilot-7031275959/payload.stdout) since it has not been created yet
[2026-02-28 16:06:27] 2026-02-28 15:05:48,367 | INFO     | executing command: df -mP /scratch/boinc/var/slot68/slots/0
[2026-02-28 16:06:27] 2026-02-28 15:05:48,389 | INFO     | sufficient remaining disk space (3306649812992 B)
[2026-02-28 16:06:27] 2026-02-28 15:05:48,390 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-02-28 16:06:27] 2026-02-28 15:05:48,390 | INFO     | output file size check: skipping output file /scratch/boinc/var/slot68/slots/0/PanDA_Pilot-7031275959/HITS.48838521._000640.pool.root.1 since it does not exist
[2026-02-28 16:06:27] 2026-02-28 15:05:48,698 | INFO     | all data control threads have been joined
[2026-02-28 16:06:27] 2026-02-28 15:05:48,706 | INFO     | [job] retrieve thread has finished
[2026-02-28 16:06:27] 2026-02-28 15:05:48,872 | INFO     | [payload] control thread has finished
[2026-02-28 16:06:27] 2026-02-28 15:05:48,909 | INFO     | [payload] validate_post thread has finished
[2026-02-28 16:06:27] 2026-02-28 15:05:49,049 | INFO     | number of running child processes to parent process 2662459: 1
[2026-02-28 16:06:27] 2026-02-28 15:05:49,049 | INFO     | maximum number of monitored processes: 6
[2026-02-28 16:06:27] 2026-02-28 15:05:49,049 | INFO     | aborting job monitoring since job object (job id=7031275959) has expired
[2026-02-28 16:06:27] 2026-02-28 15:05:49,050 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-28 16:06:27] 2026-02-28 15:05:49,050 | INFO     | will abort loop
[2026-02-28 16:06:27] 2026-02-28 15:05:49,276 | INFO     | [job] validate thread has finished
[2026-02-28 16:06:27] 2026-02-28 15:05:49,403 | INFO     | all job control threads have been joined
[2026-02-28 16:06:27] 2026-02-28 15:05:49,411 | INFO     | [job] create_data_payload thread has finished
[2026-02-28 16:06:27] 2026-02-28 15:05:49,704 | INFO     | [data] control thread has finished
[2026-02-28 16:06:27] 2026-02-28 15:05:49,712 | INFO     | [payload] validate_pre thread has finished
[2026-02-28 16:06:27] 2026-02-28 15:05:49,761 | INFO     | [payload] failed_post thread has finished
[2026-02-28 16:06:27] 2026-02-28 15:05:49,878 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-28 16:06:27] 2026-02-28 15:05:49,887 | INFO     | [data] copytool_out thread has finished
[2026-02-28 16:06:27] 2026-02-28 15:05:49,907 | INFO     | [payload] execute_payloads thread has finished
[2026-02-28 16:06:27] 2026-02-28 15:05:50,025 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-28 16:06:27] 2026-02-28 15:05:50,045 | INFO     | [data] copytool_in thread has finished
[2026-02-28 16:06:27] 2026-02-28 15:05:50,055 | INFO     | [job] job monitor thread has finished
[2026-02-28 16:06:27] 2026-02-28 15:05:50,408 | INFO     | [job] control thread has finished
[2026-02-28 16:06:27] 2026-02-28 15:05:51,031 | INFO     | [job] queue monitor thread has finished
[2026-02-28 16:06:27] 2026-02-28 15:05:53,884 | INFO     | [data] queue_monitor thread has finished
[2026-02-28 16:06:27] 2026-02-28 15:05:58,442 | INFO     | job.realtimelogging is not enabled
[2026-02-28 16:06:27] 2026-02-28 15:05:59,447 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-28 16:06:27] 2026-02-28 15:06:18,179 | INFO     | PID=2656866 has CPU usage=10.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-02-28 16:06:27] 2026-02-28 15:06:18,181 | INFO     | .. there are 19 such processes running
[2026-02-28 16:06:27] 2026-02-28 15:06:18,182 | INFO     | found 0 job(s) in 20 queues
[2026-02-28 16:06:27] 2026-02-28 15:06:18,182 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-28 16:06:27] 2026-02-28 15:06:18,182 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-28 16:06:27] 2026-02-28 15:06:22,147 | INFO     | [monitor] cgroup control has ended
[2026-02-28 16:06:27] 2026-02-28 15:06:22,204 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22725018765120)>', '<ExcThread(monitor, started 22724776040192)>']
[2026-02-28 16:06:27] 2026-02-28 15:06:23,207 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-28 16:06:27] 2026-02-28 15:06:23,207 | INFO     | [monitor] control thread has ended
[2026-02-28 16:06:27] 2026-02-28 15:06:27,229 | INFO     | all workflow threads have been joined
[2026-02-28 16:06:27] 2026-02-28 15:06:27,229 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-28 16:06:27] 2026-02-28 15:06:27,229 | INFO     | traces error code: 0
[2026-02-28 16:06:27] 2026-02-28 15:06:27,229 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-28 16:06:27] 2026-02-28 15:06:27,368 [wrapper] ==== pilot stdout END ====
[2026-02-28 16:06:27] 2026-02-28 15:06:27,372 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-28 16:06:27] 2026-02-28 15:06:27,375 [wrapper] pilotpid: 2656866
[2026-02-28 16:06:27] 2026-02-28 15:06:27,380 [wrapper] Pilot exit status: 0
[2026-02-28 16:06:27] 2026-02-28 15:06:27,396 [wrapper] pandaids: 7031275959
[2026-02-28 16:06:27] 2026-02-28 15:06:27,555 [wrapper] cleanup supervisor_pilot 2947391 2656867
[2026-02-28 16:06:27] 2026-02-28 15:06:27,560 [wrapper] Test setup, not cleaning
[2026-02-28 16:06:27] 2026-02-28 15:06:27,563 [wrapper] apfmon messages muted
[2026-02-28 16:06:27] 2026-02-28 15:06:27,567 [wrapper] ==== wrapper stdout END ====
[2026-02-28 16:06:27] 2026-02-28 15:06:27,571 [wrapper] ==== wrapper stderr END ====
[2026-02-28 16:06:27]  *** Error codes and diagnostics ***
[2026-02-28 16:06:27]     "exeErrorCode": 0,
[2026-02-28 16:06:27]     "exeErrorDiag": "",
[2026-02-28 16:06:27]     "pilotErrorCode": 0,
[2026-02-28 16:06:27]     "pilotErrorDiag": "",
[2026-02-28 16:06:27]  *** Listing of results directory ***
[2026-02-28 16:06:27] total 473604
[2026-02-28 16:06:27] -rw-r--r-- 1 boinc boinc    584627 Feb 27 10:20 pilot3.tar.gz
[2026-02-28 16:06:27] -rwx------ 1 boinc boinc     36322 Feb 27 10:23 runpilot2-wrapper.sh
[2026-02-28 16:06:27] -rw-r--r-- 1 boinc boinc      5111 Feb 27 10:25 queuedata.json
[2026-02-28 16:06:27] -rw-r--r-- 1 boinc boinc       100 Feb 28 13:24 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-28 16:06:27] -rwxr-xr-x 1 boinc boinc      7986 Feb 28 13:24 run_atlas
[2026-02-28 16:06:27] -rw-r--r-- 1 boinc boinc       105 Feb 28 13:24 job.xml
[2026-02-28 16:06:27] -rw-r--r-- 2 boinc boinc 272581955 Feb 28 13:24 EVNT.48343683._000029.pool.root.1
[2026-02-28 16:06:27] -rw-r--r-- 1 boinc boinc      6696 Feb 28 13:24 init_data.xml
[2026-02-28 16:06:27] -rw-r--r-- 2 boinc boinc     15845 Feb 28 13:24 start_atlas.sh
[2026-02-28 16:06:27] drwxrwx--x 2 boinc boinc      4096 Feb 28 13:24 shared
[2026-02-28 16:06:27] -rw-r--r-- 2 boinc boinc    597959 Feb 28 13:24 input.tar.gz
[2026-02-28 16:06:27] -rw-r--r-- 1 boinc boinc         0 Feb 28 13:24 boinc_lockfile
[2026-02-28 16:06:27] -rw-r--r-- 1 boinc boinc      2561 Feb 28 13:24 pandaJob.out
[2026-02-28 16:06:27] -rw------- 1 boinc boinc    998790 Feb 28 13:25 agis_schedconf.cvmfs.json
[2026-02-28 16:06:27] -rw------- 1 boinc boinc   1513015 Feb 28 13:25 agis_ddmendpoints.agis.ALL.json
[2026-02-28 16:06:27] -rw------- 1 boinc boinc       442 Feb 28 13:25 workernode_map.json
[2026-02-28 16:06:27] drwx------ 5 boinc boinc      4096 Feb 28 13:25 pilot3
[2026-02-28 16:06:27] -rw------- 1 boinc boinc 205057704 Feb 28 16:05 HITS.48838521._000640.pool.root.1
[2026-02-28 16:06:27] -rw-r--r-- 1 boinc boinc       529 Feb 28 16:05 boinc_task_state.xml
[2026-02-28 16:06:27] -rw------- 1 boinc boinc      1024 Feb 28 16:05 memory_monitor_summary.json
[2026-02-28 16:06:27] -rw------- 1 boinc boinc        95 Feb 28 16:05 pilot_heartbeat.json
[2026-02-28 16:06:27] -rw------- 1 boinc boinc    340727 Feb 28 16:05 log.48838521._000640.job.log.tgz.1
[2026-02-28 16:06:27] -rw------- 1 boinc boinc      6340 Feb 28 16:05 heartbeat.json
[2026-02-28 16:06:27] -rw-r--r-- 1 boinc boinc        27 Feb 28 16:06 wrapper_checkpoint.txt
[2026-02-28 16:06:27] -rw-r--r-- 1 boinc boinc      8192 Feb 28 16:06 boinc_mmap_file
[2026-02-28 16:06:27] -rw------- 1 boinc boinc      6446 Feb 28 16:06 pilotlog.txt
[2026-02-28 16:06:27] -rw------- 1 boinc boinc   1357958 Feb 28 16:06 log.48838521._000640.job.log.1
[2026-02-28 16:06:27] -rw------- 1 boinc boinc       357 Feb 28 16:06 output.list
[2026-02-28 16:06:27] -rw-r--r-- 1 boinc boinc       620 Feb 28 16:06 runtime_log
[2026-02-28 16:06:27] -rw------- 1 boinc boinc   1720320 Feb 28 16:06 result.tar.gz
[2026-02-28 16:06:27] -rw-r--r-- 1 boinc boinc      9204 Feb 28 16:06 runtime_log.err
[2026-02-28 16:06:27] -rw------- 1 boinc boinc       662 Feb 28 16:06 Yp3MDmIF9F9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmCn4KDm8D1eUm.diag
[2026-02-28 16:06:27] -rw-r--r-- 1 boinc boinc     21275 Feb 28 16:06 stderr.txt
[2026-02-28 16:06:27] HITS file was successfully produced:
[2026-02-28 16:06:27] -rw------- 1 boinc boinc 205057704 Feb 28 16:05 shared/HITS.pool.root.1
[2026-02-28 16:06:27]  *** Contents of shared directory: ***
[2026-02-28 16:06:27] total 468736
[2026-02-28 16:06:27] -rw-r--r-- 2 boinc boinc 272581955 Feb 28 13:24 ATLAS.root_0
[2026-02-28 16:06:27] -rw-r--r-- 2 boinc boinc     15845 Feb 28 13:24 start_atlas.sh
[2026-02-28 16:06:27] -rw-r--r-- 2 boinc boinc    597959 Feb 28 13:24 input.tar.gz
[2026-02-28 16:06:27] -rw------- 1 boinc boinc 205057704 Feb 28 16:05 HITS.pool.root.1
[2026-02-28 16:06:27] -rw------- 1 boinc boinc   1720320 Feb 28 16:06 result.tar.gz
16:06:29 (2652546): run_atlas exited; CPU time 37268.397808
16:06:29 (2652546): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN