Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
23:44:43 (5219): wrapper (7.7.26015): starting
23:44:43 (5219): wrapper: running run_atlas (--nthreads 8)
[2026-02-27 23:44:43] Arguments: --nthreads 8
[2026-02-27 23:44:43] Threads: 8
[2026-02-27 23:44:43] Checking for CVMFS
[2026-02-27 23:44:43] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-27 23:47:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-27 23:47:04] Running cvmfs_config stat atlas.cern.ch
[2026-02-27 23:47:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-27 23:47:07] 2.11.2.0 31778 74851 126480 156710 0 50 17803234 25165825 0 130560 58 22391968 99.802 15853049 1041 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://141.99.253.245:3128/ 0
[2026-02-27 23:47:07] CVMFS is ok
[2026-02-27 23:47:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-27 23:47:07] Checking for apptainer binary...
[2026-02-27 23:47:07] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-27 23:47:07] Running /usr/bin/apptainer --version
[2026-02-27 23:47:07] apptainer version 1.3.2-1.el7
[2026-02-27 23:47:07] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-27 23:47:09] cg-vwn373.simple-grid.lan
[2026-02-27 23:47:09] apptainer works
[2026-02-27 23:47:09] Set ATHENA_PROC_NUMBER=8
[2026-02-27 23:47:09] Set ATHENA_CORE_NUMBER=8
[2026-02-27 23:47:09] Starting ATLAS job with PandaID=7031389012
[2026-02-27 23:47:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/14 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-28 04:44:29]  *** The last 200 lines of the pilot log: ***
[2026-02-28 04:44:29] 2026-02-28 03:43:46,234 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-28 04:44:29] 2026-02-28 03:43:46,234 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-28 04:44:29] 2026-02-28 03:43:46,241 | INFO     | fitting pss+swap vs Time
[2026-02-28 04:44:29] 2026-02-28 03:43:46,241 | INFO     | sum of square deviations: 7562532492.5
[2026-02-28 04:44:29] 2026-02-28 03:43:46,244 | INFO     | sum of deviations: 31941492799.499985
[2026-02-28 04:44:29] 2026-02-28 03:43:46,244 | INFO     | mean x: 1772241376.5
[2026-02-28 04:44:29] 2026-02-28 03:43:46,245 | INFO     | mean y: 2525108.54137931
[2026-02-28 04:44:29] 2026-02-28 03:43:46,245 | INFO     | intersect: -7482802752.5409565
[2026-02-28 04:44:29] 2026-02-28 03:43:46,245 | INFO     | chi2: 2.2539098607567376
[2026-02-28 04:44:29] 2026-02-28 03:43:46,246 | INFO     | sum of square deviations: 7178069470.0
[2026-02-28 04:44:29] 2026-02-28 03:43:46,249 | INFO     | sum of deviations: 50238471377.99999
[2026-02-28 04:44:29] 2026-02-28 03:43:46,249 | INFO     | mean x: 1772241224.0
[2026-02-28 04:44:29] 2026-02-28 03:43:46,249 | INFO     | mean y: 2532258.203508772
[2026-02-28 04:44:29] 2026-02-28 03:43:46,249 | INFO     | intersect: -12401177454.96477
[2026-02-28 04:44:29] 2026-02-28 03:43:46,250 | INFO     | chi2: 1.4838444199047816
[2026-02-28 04:44:29] 2026-02-28 03:43:46,250 | INFO     | current chi2=1.4838444199047816 (change=34.16576031986527 %)
[2026-02-28 04:44:29] 2026-02-28 03:43:46,251 | INFO     | sum of square deviations: 6806862510.0
[2026-02-28 04:44:29] 2026-02-28 03:43:46,254 | INFO     | sum of deviations: 49029065156.500046
[2026-02-28 04:44:29] 2026-02-28 03:43:46,254 | INFO     | mean x: 1772241071.5
[2026-02-28 04:44:29] 2026-02-28 03:43:46,254 | INFO     | mean y: 2531761.3035714286
[2026-02-28 04:44:29] 2026-02-28 03:43:46,254 | INFO     | intersect: -12762721369.628107
[2026-02-28 04:44:29] 2026-02-28 03:43:46,255 | INFO     | chi2: 1.4843215048272378
[2026-02-28 04:44:29] 2026-02-28 03:43:46,255 | INFO     | current chi2=1.4843215048272378 (change=-0.03215195043742211 %)
[2026-02-28 04:44:29] 2026-02-28 03:43:46,255 | INFO     | right removable region: 279
[2026-02-28 04:44:29] 2026-02-28 03:43:46,255 | INFO     | sum of square deviations: 7178069470.0
[2026-02-28 04:44:29] 2026-02-28 03:43:46,258 | INFO     | sum of deviations: -12056148458.000002
[2026-02-28 04:44:29] 2026-02-28 03:43:46,259 | INFO     | mean x: 1772241529.0
[2026-02-28 04:44:29] 2026-02-28 03:43:46,259 | INFO     | mean y: 2542420.5122807017
[2026-02-28 04:44:29] 2026-02-28 03:43:46,259 | INFO     | intersect: 2979165461.8962636
[2026-02-28 04:44:29] 2026-02-28 03:43:46,260 | INFO     | chi2: 0.8641985192034295
[2026-02-28 04:44:29] 2026-02-28 03:43:46,260 | INFO     | current chi2=0.8641985192034295 (change=61.65780476627935 %)
[2026-02-28 04:44:29] 2026-02-28 03:43:46,260 | INFO     | sum of square deviations: 6806862510.0
[2026-02-28 04:44:29] 2026-02-28 03:43:46,263 | INFO     | sum of deviations: -11824908529.500004
[2026-02-28 04:44:29] 2026-02-28 03:43:46,263 | INFO     | mean x: 1772241681.5
[2026-02-28 04:44:29] 2026-02-28 03:43:46,263 | INFO     | mean y: 2542302.4535714285
[2026-02-28 04:44:29] 2026-02-28 03:43:46,264 | INFO     | intersect: 3081287575.347996
[2026-02-28 04:44:29] 2026-02-28 03:43:46,264 | INFO     | chi2: 0.8487307489182203
[2026-02-28 04:44:29] 2026-02-28 03:43:46,264 | INFO     | current chi2=0.8487307489182203 (change=1.7898399431957506 %)
[2026-02-28 04:44:29] 2026-02-28 03:43:46,264 | INFO     | left removable region: 20
[2026-02-28 04:44:29] 2026-02-28 03:43:46,265 | INFO     | sum of square deviations: 5387301010.0
[2026-02-28 04:44:29] 2026-02-28 03:43:46,267 | INFO     | sum of deviations: 17585757893.000004
[2026-02-28 04:44:29] 2026-02-28 03:43:46,268 | INFO     | mean x: 1772241651.0
[2026-02-28 04:44:29] 2026-02-28 03:43:46,268 | INFO     | mean y: 2544460.193050193
[2026-02-28 04:44:29] 2026-02-28 03:43:46,268 | INFO     | intersect: -5782581068.2534485
[2026-02-28 04:44:29] 2026-02-28 03:43:46,268 | INFO     | chi2: 0.001121376818880302
[2026-02-28 04:44:29] 2026-02-28 03:43:46,269 | INFO     | current memory leak: 3.26 B/s (using 259 data points, chi2=0.00)
[2026-02-28 04:44:29] 2026-02-28 03:43:46,270 | INFO     | could have reported an average CPU frequency of 1999 MHz (13 samples)
[2026-02-28 04:44:29] 2026-02-28 03:43:46,270 | INFO     | ..............................
[2026-02-28 04:44:29] 2026-02-28 03:43:46,270 | INFO     | . Timing measurements:
[2026-02-28 04:44:29] 2026-02-28 03:43:46,271 | INFO     | . get job = 0 s
[2026-02-28 04:44:29] 2026-02-28 03:43:46,271 | INFO     | . initial setup = 7 s
[2026-02-28 04:44:29] 2026-02-28 03:43:46,271 | INFO     | . payload setup = 8 s
[2026-02-28 04:44:29] 2026-02-28 03:43:46,271 | INFO     | . stage-in = 0 s
[2026-02-28 04:44:29] 2026-02-28 03:43:46,271 | INFO     | . payload execution = 17663 s
[2026-02-28 04:44:29] 2026-02-28 03:43:46,271 | INFO     | . stage-out = 1 s
[2026-02-28 04:44:29] 2026-02-28 03:43:46,271 | INFO     | . log creation = 0 s
[2026-02-28 04:44:29] 2026-02-28 03:43:46,271 | INFO     | ..............................
[2026-02-28 04:44:29] 2026-02-28 03:43:46,389 | INFO     | 
[2026-02-28 04:44:29] 2026-02-28 03:43:46,389 | INFO     | job summary report
[2026-02-28 04:44:29] 2026-02-28 03:43:46,389 | INFO     | --------------------------------------------------
[2026-02-28 04:44:29] 2026-02-28 03:43:46,389 | INFO     | PanDA job id: 7031389012
[2026-02-28 04:44:29] 2026-02-28 03:43:46,389 | INFO     | task id: 48842784
[2026-02-28 04:44:29] 2026-02-28 03:43:46,389 | INFO     | errors: (none)
[2026-02-28 04:44:29] 2026-02-28 03:43:46,390 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-28 04:44:29] 2026-02-28 03:43:46,390 | INFO     | pilot state: finished 
[2026-02-28 04:44:29] 2026-02-28 03:43:46,390 | INFO     | transexitcode: 0
[2026-02-28 04:44:29] 2026-02-28 03:43:46,390 | INFO     | exeerrorcode: 0
[2026-02-28 04:44:29] 2026-02-28 03:43:46,390 | INFO     | exeerrordiag: 
[2026-02-28 04:44:29] 2026-02-28 03:43:46,390 | INFO     | exitcode: 0
[2026-02-28 04:44:29] 2026-02-28 03:43:46,390 | INFO     | exitmsg: OK
[2026-02-28 04:44:29] 2026-02-28 03:43:46,390 | INFO     | cpuconsumptiontime: 133789 s
[2026-02-28 04:44:29] 2026-02-28 03:43:46,390 | INFO     | nevents: 400
[2026-02-28 04:44:29] 2026-02-28 03:43:46,390 | INFO     | neventsw: 0
[2026-02-28 04:44:29] 2026-02-28 03:43:46,391 | INFO     | pid: 13695
[2026-02-28 04:44:29] 2026-02-28 03:43:46,391 | INFO     | pgrp: 13695
[2026-02-28 04:44:29] 2026-02-28 03:43:46,391 | INFO     | corecount: 8
[2026-02-28 04:44:29] 2026-02-28 03:43:46,391 | INFO     | event service: False
[2026-02-28 04:44:29] 2026-02-28 03:43:46,391 | INFO     | sizes: {0: 2282152, 1: 2282386, 11: 2282386, 17676: 2314625, 17679: 2323625, 17680: 2323681, 17681: 2324003}
[2026-02-28 04:44:29] 2026-02-28 03:43:46,391 | INFO     | --------------------------------------------------
[2026-02-28 04:44:29] 2026-02-28 03:43:46,391 | INFO     | 
[2026-02-28 04:44:29] 2026-02-28 03:43:46,391 | INFO     | executing command: ls -lF /var/lib/boinc/slots/14
[2026-02-28 04:44:29] 2026-02-28 03:43:46,415 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-28 04:44:29] 2026-02-28 03:43:46,415 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-28 04:44:29] 2026-02-28 03:43:46,415 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-28 04:44:29] 2026-02-28 03:43:46,415 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-28 04:44:29] 2026-02-28 03:43:46,415 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-28 04:44:29] 2026-02-28 03:43:46,415 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-28 04:44:29] 2026-02-28 03:43:46,416 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-28 04:44:29] 2026-02-28 03:43:46,416 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-28 04:44:29] 2026-02-28 03:43:46,416 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-28 04:44:29] 2026-02-28 03:43:46,416 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-28 04:44:29] 2026-02-28 03:43:46,416 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-28 04:44:29] 2026-02-28 03:43:46,416 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-28 04:44:29] 2026-02-28 03:43:46,416 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-28 04:44:29] 2026-02-28 03:43:46,416 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-28 04:44:29] 2026-02-28 03:43:46,417 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-28 04:44:29] 2026-02-28 03:43:46,417 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-28 04:44:29] 2026-02-28 03:43:46,417 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-28 04:44:29] 2026-02-28 03:43:46,417 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-28 04:44:29] 2026-02-28 03:43:46,417 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-28 04:44:29] 2026-02-28 03:43:46,417 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-28 04:44:29] 2026-02-28 03:43:46,417 | INFO     | job 7031389012 has completed (purged errors)
[2026-02-28 04:44:29] 2026-02-28 03:43:46,417 | INFO     | overall cleanup function is called
[2026-02-28 04:44:29] 2026-02-28 03:43:47,426 | INFO     | --- collectZombieJob: --- 10, [13695]
[2026-02-28 04:44:29] 2026-02-28 03:43:47,426 | INFO     | zombie collector waiting for pid 13695
[2026-02-28 04:44:29] 2026-02-28 03:43:47,426 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-28 04:44:29] 2026-02-28 03:43:47,427 | INFO     | collected zombie processes
[2026-02-28 04:44:29] 2026-02-28 03:43:47,427 | INFO     | will attempt to kill all subprocesses of pid=13695
[2026-02-28 04:44:29] 2026-02-28 03:43:47,485 | INFO     | process IDs to be killed: [13695] (in reverse order)
[2026-02-28 04:44:29] 2026-02-28 03:43:47,535 | WARNING  | found no corresponding commands to process id(s)
[2026-02-28 04:44:29] 2026-02-28 03:43:47,535 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-28 04:44:29] 2026-02-28 03:43:47,537 | INFO     | did not find any defunct processes belonging to 13695
[2026-02-28 04:44:29] 2026-02-28 03:43:47,538 | INFO     | did not find any defunct processes belonging to 13695
[2026-02-28 04:44:29] 2026-02-28 03:43:47,538 | INFO     | ready for new job
[2026-02-28 04:44:29] 2026-02-28 03:43:47,538 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-28 04:44:29] 2026-02-28 03:43:47,541 | INFO     | **************************************
[2026-02-28 04:44:29] 2026-02-28 03:43:47,541 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-28 04:44:29] 2026-02-28 03:43:47,541 | INFO     | **************************************
[2026-02-28 04:44:29] 2026-02-28 03:43:47,541 | INFO     | 
[2026-02-28 04:44:29] 2026-02-28 03:43:47,542 | INFO     | pilot is running in a VM
[2026-02-28 04:44:29] 2026-02-28 03:43:47,542 | INFO     | architecture information:
[2026-02-28 04:44:29] 2026-02-28 03:43:47,542 | INFO     | executing command: cat /etc/os-release
[2026-02-28 04:44:29] 2026-02-28 03:43:47,560 | INFO     | cat /etc/os-release:
[2026-02-28 04:44:29] NAME="CentOS Linux"
[2026-02-28 04:44:29] VERSION="7 (Core)"
[2026-02-28 04:44:29] ID="centos"
[2026-02-28 04:44:29] ID_LIKE="rhel fedora"
[2026-02-28 04:44:29] VERSION_ID="7"
[2026-02-28 04:44:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-28 04:44:29] ANSI_COLOR="0;31"
[2026-02-28 04:44:29] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-28 04:44:29] HOME_URL="https://www.centos.org/"
[2026-02-28 04:44:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-28 04:44:29] 
[2026-02-28 04:44:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-28 04:44:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-28 04:44:29] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-28 04:44:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-28 04:44:29] 
[2026-02-28 04:44:29] 2026-02-28 03:43:47,560 | INFO     | **************************************
[2026-02-28 04:44:29] 2026-02-28 03:43:48,063 | INFO     | executing command: df -mP /var/lib/boinc/slots/14
[2026-02-28 04:44:29] 2026-02-28 03:43:48,086 | INFO     | sufficient remaining disk space (497560846336 B)
[2026-02-28 04:44:29] 2026-02-28 03:43:48,086 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-28 04:44:29] 2026-02-28 03:43:48,087 | INFO     | current server update state: UPDATING_FINAL
[2026-02-28 04:44:29] 2026-02-28 03:43:48,087 | INFO     | update_server=False
[2026-02-28 04:44:29] 2026-02-28 03:43:48,087 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-28 04:44:29] 2026-02-28 03:43:48,087 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-28 04:44:29] 2026-02-28 03:43:48,089 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-28 04:44:29] 2026-02-28 03:43:48,093 | WARNING  | process 13695 can no longer be monitored (due to stat problems) - aborting
[2026-02-28 04:44:29] 2026-02-28 03:43:48,136 | INFO     | using path: /var/lib/boinc/slots/14/memory_monitor_summary.json (trf name=prmon)
[2026-02-28 04:44:29] 2026-02-28 03:43:48,137 | INFO     | using path: /var/lib/boinc/slots/14/memory_monitor_summary.json (trf name=prmon)
[2026-02-28 04:44:29] 2026-02-28 03:43:48,137 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-02-28 04:44:29] 2026-02-28 03:43:48,137 | WARNING  | maxPSS not found in memory monitor output
[2026-02-28 04:44:29] 2026-02-28 03:43:48,154 | INFO     | all job control threads have been joined
[2026-02-28 04:44:29] 2026-02-28 03:43:48,194 | INFO     | number of running child processes to parent process 13695: 1
[2026-02-28 04:44:29] 2026-02-28 03:43:48,195 | INFO     | maximum number of monitored processes: 7
[2026-02-28 04:44:29] 2026-02-28 03:43:48,195 | INFO     | aborting job monitoring since job object (job id=7031389012) has expired
[2026-02-28 04:44:29] 2026-02-28 03:43:48,195 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-28 04:44:29] 2026-02-28 03:43:48,195 | INFO     | will abort loop
[2026-02-28 04:44:29] 2026-02-28 03:43:49,001 | INFO     | all payload control threads have been joined
[2026-02-28 04:44:29] 2026-02-28 03:43:49,093 | INFO     | [job] retrieve thread has finished
[2026-02-28 04:44:29] 2026-02-28 03:43:49,093 | INFO     | [job] queue monitor thread has finished
[2026-02-28 04:44:29] 2026-02-28 03:43:49,160 | INFO     | [job] control thread has finished
[2026-02-28 04:44:29] 2026-02-28 03:43:49,192 | INFO     | all data control threads have been joined
[2026-02-28 04:44:29] 2026-02-28 03:43:49,201 | INFO     | [job] job monitor thread has finished
[2026-02-28 04:44:29] 2026-02-28 03:43:49,697 | INFO     | [job] create_data_payload thread has finished
[2026-02-28 04:44:29] 2026-02-28 03:43:49,861 | INFO     | [payload] execute_payloads thread has finished
[2026-02-28 04:44:29] 2026-02-28 03:43:49,879 | INFO     | [payload] failed_post thread has finished
[2026-02-28 04:44:29] 2026-02-28 03:43:49,954 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-28 04:44:29] 2026-02-28 03:43:50,007 | INFO     | [payload] control thread has finished
[2026-02-28 04:44:29] 2026-02-28 03:43:50,019 | INFO     | [data] copytool_in thread has finished
[2026-02-28 04:44:29] 2026-02-28 03:43:50,095 | INFO     | [data] copytool_out thread has finished
[2026-02-28 04:44:29] 2026-02-28 03:43:50,191 | INFO     | [job] validate thread has finished
[2026-02-28 04:44:29] 2026-02-28 03:43:50,198 | INFO     | [data] control thread has finished
[2026-02-28 04:44:29] 2026-02-28 03:43:50,481 | INFO     | [payload] validate_post thread has finished
[2026-02-28 04:44:29] 2026-02-28 03:43:50,488 | INFO     | [payload] validate_pre thread has finished
[2026-02-28 04:44:29] 2026-02-28 03:43:51,200 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-28 04:44:29] 2026-02-28 03:43:55,207 | INFO     | [data] queue_monitor thread has finished
[2026-02-28 04:44:29] 2026-02-28 03:44:18,873 | INFO     | PID=9281 has CPU usage=4.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-02-28 04:44:29] 2026-02-28 03:44:18,874 | INFO     | found 0 job(s) in 20 queues
[2026-02-28 04:44:29] 2026-02-28 03:44:18,874 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-28 04:44:29] 2026-02-28 03:44:18,874 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-28 04:44:29] 2026-02-28 03:44:23,234 | INFO     | [monitor] cgroup control has ended
[2026-02-28 04:44:29] 2026-02-28 03:44:24,136 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139938275800896)>', '<ExcThread(monitor, started 139937617803008)>']
[2026-02-28 04:44:29] 2026-02-28 03:44:24,905 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-28 04:44:29] 2026-02-28 03:44:24,905 | INFO     | [monitor] control thread has ended
[2026-02-28 04:44:29] 2026-02-28 03:44:29,162 | INFO     | all workflow threads have been joined
[2026-02-28 04:44:29] 2026-02-28 03:44:29,162 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-28 04:44:29] 2026-02-28 03:44:29,162 | INFO     | traces error code: 0
[2026-02-28 04:44:29] 2026-02-28 03:44:29,163 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-28 04:44:29] 2026-02-28 03:44:29,313 [wrapper] ==== pilot stdout END ====
[2026-02-28 04:44:29] 2026-02-28 03:44:29,317 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-28 04:44:29] 2026-02-28 03:44:29,321 [wrapper] pilotpid: 9281
[2026-02-28 04:44:29] 2026-02-28 03:44:29,325 [wrapper] Pilot exit status: 0
[2026-02-28 04:44:29] 2026-02-28 03:44:29,343 [wrapper] pandaids: 7031389012
[2026-02-28 04:44:29] 2026-02-28 03:44:29,372 [wrapper] cleanup supervisor_pilot 19709 9282
[2026-02-28 04:44:29] 2026-02-28 03:44:29,379 [wrapper] Test setup, not cleaning
[2026-02-28 04:44:29] 2026-02-28 03:44:29,387 [wrapper] apfmon messages muted
[2026-02-28 04:44:29] 2026-02-28 03:44:29,391 [wrapper] ==== wrapper stdout END ====
[2026-02-28 04:44:29] 2026-02-28 03:44:29,394 [wrapper] ==== wrapper stderr END ====
[2026-02-28 04:44:29]  *** Error codes and diagnostics ***
[2026-02-28 04:44:29]     "exeErrorCode": 0,
[2026-02-28 04:44:29]     "exeErrorDiag": "",
[2026-02-28 04:44:29]     "pilotErrorCode": 0,
[2026-02-28 04:44:29]     "pilotErrorDiag": "",
[2026-02-28 04:44:29]  *** Listing of results directory ***
[2026-02-28 04:44:29] total 583816
[2026-02-28 04:44:29] -rw-r--r--. 1 boinc boinc      5111 Feb 27 10:20 queuedata.json
[2026-02-28 04:44:29] -rw-r--r--. 1 boinc boinc    584627 Feb 27 10:20 pilot3.tar.gz
[2026-02-28 04:44:29] -rwx------. 1 boinc boinc     36322 Feb 27 10:20 runpilot2-wrapper.sh
[2026-02-28 04:44:29] -rw-r--r--. 1 boinc boinc       100 Feb 27 23:44 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-28 04:44:29] -rwxr-xr-x. 1 boinc boinc      7986 Feb 27 23:44 run_atlas
[2026-02-28 04:44:29] -rw-r--r--. 1 boinc boinc       105 Feb 27 23:44 job.xml
[2026-02-28 04:44:29] -rw-r--r--. 2 boinc boinc 294986355 Feb 27 23:44 EVNT.48449281._000003.pool.root.1
[2026-02-28 04:44:29] -rw-r--r--. 1 boinc boinc      6392 Feb 27 23:44 init_data.xml
[2026-02-28 04:44:29] -rw-r--r--. 2 boinc boinc     15845 Feb 27 23:44 start_atlas.sh
[2026-02-28 04:44:29] drwxrwx--x. 2 boinc boinc        68 Feb 27 23:44 shared
[2026-02-28 04:44:29] -rw-r--r--. 2 boinc boinc    597982 Feb 27 23:44 input.tar.gz
[2026-02-28 04:44:29] -rw-r--r--. 1 boinc boinc         0 Feb 27 23:44 boinc_lockfile
[2026-02-28 04:44:29] -rw-r--r--. 1 boinc boinc      2629 Feb 27 23:47 pandaJob.out
[2026-02-28 04:44:29] -rw-------. 1 boinc boinc    998790 Feb 27 23:48 agis_schedconf.cvmfs.json
[2026-02-28 04:44:29] -rw-------. 1 boinc boinc       415 Feb 27 23:48 workernode_map.json
[2026-02-28 04:44:29] drwx------. 5 boinc boinc      4096 Feb 27 23:48 pilot3
[2026-02-28 04:44:29] -rw-------. 1 boinc boinc 293005080 Feb 28 04:40 HITS.48842784._000074.pool.root.1
[2026-02-28 04:44:29] -rw-r--r--. 1 boinc boinc       531 Feb 28 04:42 boinc_task_state.xml
[2026-02-28 04:44:29] -rw-------. 1 boinc boinc        95 Feb 28 04:43 pilot_heartbeat.json
[2026-02-28 04:44:29] -rw-------. 1 boinc boinc      1015 Feb 28 04:43 memory_monitor_summary.json
[2026-02-28 04:44:29] -rw-------. 1 boinc boinc   1513015 Feb 28 04:43 agis_ddmendpoints.agis.ALL.json
[2026-02-28 04:44:29] -rw-------. 1 boinc boinc    520117 Feb 28 04:43 log.48842784._000074.job.log.tgz.1
[2026-02-28 04:44:29] -rw-------. 1 boinc boinc      6306 Feb 28 04:43 heartbeat.json
[2026-02-28 04:44:29] -rw-r--r--. 1 boinc boinc      8192 Feb 28 04:44 boinc_mmap_file
[2026-02-28 04:44:29] -rw-r--r--. 1 boinc boinc        29 Feb 28 04:44 wrapper_checkpoint.txt
[2026-02-28 04:44:29] -rw-------. 1 boinc boinc      5647 Feb 28 04:44 pilotlog.txt
[2026-02-28 04:44:29] -rw-------. 1 boinc boinc   2437400 Feb 28 04:44 log.48842784._000074.job.log.1
[2026-02-28 04:44:29] -rw-------. 1 boinc boinc       357 Feb 28 04:44 output.list
[2026-02-28 04:44:29] -rw-r--r--. 1 boinc boinc       620 Feb 28 04:44 runtime_log
[2026-02-28 04:44:29] -rw-------. 1 boinc boinc   2979840 Feb 28 04:44 result.tar.gz
[2026-02-28 04:44:29] -rw-------. 1 boinc boinc       656 Feb 28 04:44 s5EODmPC9F9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmxe4KDm9VFjJm.diag
[2026-02-28 04:44:29] -rw-r--r--. 1 boinc boinc      8832 Feb 28 04:44 runtime_log.err
[2026-02-28 04:44:29] -rw-r--r--. 1 boinc boinc     20844 Feb 28 04:44 stderr.txt
[2026-02-28 04:44:29] HITS file was successfully produced:
[2026-02-28 04:44:29] -rw-------. 1 boinc boinc 293005080 Feb 28 04:40 shared/HITS.pool.root.1
[2026-02-28 04:44:29]  *** Contents of shared directory: ***
[2026-02-28 04:44:29] total 577728
[2026-02-28 04:44:29] -rw-r--r--. 2 boinc boinc 294986355 Feb 27 23:44 ATLAS.root_0
[2026-02-28 04:44:29] -rw-r--r--. 2 boinc boinc     15845 Feb 27 23:44 start_atlas.sh
[2026-02-28 04:44:29] -rw-r--r--. 2 boinc boinc    597982 Feb 27 23:44 input.tar.gz
[2026-02-28 04:44:29] -rw-------. 1 boinc boinc 293005080 Feb 28 04:40 HITS.pool.root.1
[2026-02-28 04:44:29] -rw-------. 1 boinc boinc   2979840 Feb 28 04:44 result.tar.gz
04:44:30 (5219): run_atlas exited; CPU time 133903.502142
04:44:30 (5219): called boinc_finish(0)

</stderr_txt>
]]>

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