Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
10:11:51 (13239): wrapper (7.7.26015): starting
10:11:51 (13239): wrapper: running run_atlas (--nthreads 8)
[2026-02-27 10:11:51] Arguments: --nthreads 8
[2026-02-27 10:11:51] Threads: 8
[2026-02-27 10:11:51] Checking for CVMFS
[2026-02-27 10:11:51] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-27 10:11:51] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-27 10:11:51] Running cvmfs_config stat atlas.cern.ch
[2026-02-27 10:11:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-27 10:11:51] 2.11.2.0 2701 194482 89964 156699 0 49 11029849 20275201 1 130560 0 48013026 99.897 9319756 28081 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-02-27 10:11:51] CVMFS is ok
[2026-02-27 10:11:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-27 10:11:51] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-27 10:11:51] Further information can be found at the LHC@home message board.
[2026-02-27 10:11:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-27 10:11:51] Checking for apptainer binary...
[2026-02-27 10:11:51] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-27 10:11:51] Running /usr/bin/apptainer --version
[2026-02-27 10:11:51] apptainer version 1.3.2-1.el7
[2026-02-27 10:11:51] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-27 10:11:53] c-204-1.aglt2.org
[2026-02-27 10:11:53] apptainer works
[2026-02-27 10:11:53] Set ATHENA_PROC_NUMBER=8
[2026-02-27 10:11:53] Set ATHENA_CORE_NUMBER=8
[2026-02-27 10:11:53] Starting ATLAS job with PandaID=7031262798
[2026-02-27 10:11:53] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-27 11:50:33]  *** The last 200 lines of the pilot log: ***
[2026-02-27 11:50:33]  is_tar=False
[2026-02-27 11:50:33]  lfn=log.48700922._000100.job.log.tgz.1
[2026-02-27 11:50:33]  mtime=0
[2026-02-27 11:50:33]  protocol_id=None
[2026-02-27 11:50:33]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-02-27 11:50:33]  replicas=None
[2026-02-27 11:50:33]  scope=mc23_13p6TeV
[2026-02-27 11:50:33]  status=None
[2026-02-27 11:50:33]  status_code=0
[2026-02-27 11:50:33]  storage_token=
[2026-02-27 11:50:33]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-7031262798/log.48700922._000100.job.log.tgz.1
[2026-02-27 11:50:33]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/af/00/log.48700922._000100.job.log.tgz.1
[2026-02-27 11:50:33]  workdir=None
[2026-02-27 11:50:33] ]
[2026-02-27 11:50:33] 2026-02-27 16:49:23,204 | INFO     | transferring file log.48700922._000100.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-7031262798/log.48700922._000100.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-02-27 11:50:33] 2026-02-27 16:49:23,205 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-7031262798/log.48700922._000100.job.log.tgz.1 /tmp/boinchome/slots/0/log.48700922._000100.job
[2026-02-27 11:50:33] 2026-02-27 16:49:23,229 | INFO     | adding to output.list: log.48700922._000100.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/af/00/log.48700922._000100.job.log.tg
[2026-02-27 11:50:33] 2026-02-27 16:49:23,231 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-02-27 11:50:33] 2026-02-27 16:49:23,231 | INFO     | summary of transferred files:
[2026-02-27 11:50:33] 2026-02-27 16:49:23,232 | INFO     |  -- lfn=log.48700922._000100.job.log.tgz.1, status_code=0, status=transferred
[2026-02-27 11:50:33] 2026-02-27 16:49:23,232 | INFO     | stage-out finished correctly
[2026-02-27 11:50:33] 2026-02-27 16:49:23,992 | INFO     | time since job start (5826s) is within the limit (349056.0s)
[2026-02-27 11:50:33] 2026-02-27 16:49:24,106 | WARNING  | process 21415 can no longer be monitored (due to stat problems) - aborting
[2026-02-27 11:50:33] 2026-02-27 16:49:24,106 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7031262798/memory_monitor_summary.json (trf name=prmon)
[2026-02-27 11:50:33] 2026-02-27 16:49:24,170 | INFO     | number of running child processes to parent process 21415: 1
[2026-02-27 11:50:33] 2026-02-27 16:49:24,170 | INFO     | maximum number of monitored processes: 6
[2026-02-27 11:50:33] 2026-02-27 16:49:25,998 | INFO     | time since job start (5828s) is within the limit (349056.0s)
[2026-02-27 11:50:33] 2026-02-27 16:49:26,589 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-02-27 11:50:33] 2026-02-27 16:49:26,674 | INFO     | monitor loop #443: job 0:7031262798 is in state 'finished'
[2026-02-27 11:50:33] 2026-02-27 16:49:26,674 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-02-27 11:50:33] 2026-02-27 16:49:27,459 | INFO     | job 7031262798 has state=finished
[2026-02-27 11:50:33] 2026-02-27 16:49:27,459 | INFO     | preparing for final server update for job 7031262798 in state='finished'
[2026-02-27 11:50:33] 2026-02-27 16:49:27,460 | INFO     | reading metadata from: /tmp/boinchome/slots/0/PanDA_Pilot-7031262798/jobReport.json
[2026-02-27 11:50:33] 2026-02-27 16:49:27,463 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/0/workernode_map.json
[2026-02-27 11:50:33] 2026-02-27 16:49:27,463 | INFO     | this job has now completed (state=finished)
[2026-02-27 11:50:33] 2026-02-27 16:49:27,464 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-27 11:50:33] 2026-02-27 16:49:27,464 | INFO     | log transfer has been attempted: DONE
[2026-02-27 11:50:33] 2026-02-27 16:49:27,464 | INFO     | job 7031262798 has finished - writing final server update
[2026-02-27 11:50:33] 2026-02-27 16:49:27,464 | INFO     | total number of processed events: 400 (read)
[2026-02-27 11:50:33] 2026-02-27 16:49:27,466 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7031262798/memory_monitor_summary.json (trf name=prmon)
[2026-02-27 11:50:33] 2026-02-27 16:49:27,466 | INFO     | extracted standard info from prmon json
[2026-02-27 11:50:33] 2026-02-27 16:49:27,466 | INFO     | extracted standard memory fields from prmon json
[2026-02-27 11:50:33] 2026-02-27 16:49:27,467 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-27 11:50:33] 2026-02-27 16:49:27,467 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-27 11:50:33] 2026-02-27 16:49:27,467 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-27 11:50:33] 2026-02-27 16:49:27,469 | INFO     | fitting pss+swap vs Time
[2026-02-27 11:50:33] 2026-02-27 16:49:27,469 | INFO     | sum of square deviations: 218571540.0
[2026-02-27 11:50:33] 2026-02-27 16:49:27,470 | INFO     | sum of deviations: -1095071268.0
[2026-02-27 11:50:33] 2026-02-27 16:49:27,470 | INFO     | mean x: 1772208152.0
[2026-02-27 11:50:33] 2026-02-27 16:49:27,470 | INFO     | mean y: 2517337.4831460672
[2026-02-27 11:50:33] 2026-02-27 16:49:27,470 | INFO     | intersect: 8881506011.720316
[2026-02-27 11:50:33] 2026-02-27 16:49:27,470 | INFO     | chi2: 0.0066373397523949995
[2026-02-27 11:50:33] 2026-02-27 16:49:27,470 | INFO     | current memory leak: -5.01 B/s (using 89 data points, chi2=0.01)
[2026-02-27 11:50:33] 2026-02-27 16:49:27,471 | INFO     | could have reported an average CPU frequency of 1779 MHz (7 samples)
[2026-02-27 11:50:33] 2026-02-27 16:49:27,471 | INFO     | ..............................
[2026-02-27 11:50:33] 2026-02-27 16:49:27,471 | INFO     | . Timing measurements:
[2026-02-27 11:50:33] 2026-02-27 16:49:27,471 | INFO     | . get job = 0 s
[2026-02-27 11:50:33] 2026-02-27 16:49:27,471 | INFO     | . initial setup = 8 s
[2026-02-27 11:50:33] 2026-02-27 16:49:27,471 | INFO     | . payload setup = 8 s
[2026-02-27 11:50:33] 2026-02-27 16:49:27,471 | INFO     | . stage-in = 0 s
[2026-02-27 11:50:33] 2026-02-27 16:49:27,472 | INFO     | . payload execution = 5802 s
[2026-02-27 11:50:33] 2026-02-27 16:49:27,472 | INFO     | . stage-out = 0 s
[2026-02-27 11:50:33] 2026-02-27 16:49:27,472 | INFO     | . log creation = 0 s
[2026-02-27 11:50:33] 2026-02-27 16:49:27,472 | INFO     | ..............................
[2026-02-27 11:50:33] 2026-02-27 16:49:27,555 | INFO     | 
[2026-02-27 11:50:33] 2026-02-27 16:49:27,555 | INFO     | job summary report
[2026-02-27 11:50:33] 2026-02-27 16:49:27,555 | INFO     | --------------------------------------------------
[2026-02-27 11:50:33] 2026-02-27 16:49:27,555 | INFO     | PanDA job id: 7031262798
[2026-02-27 11:50:33] 2026-02-27 16:49:27,556 | INFO     | task id: 48700922
[2026-02-27 11:50:33] 2026-02-27 16:49:27,556 | INFO     | errors: (none)
[2026-02-27 11:50:33] 2026-02-27 16:49:27,556 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-27 11:50:33] 2026-02-27 16:49:27,556 | INFO     | pilot state: finished 
[2026-02-27 11:50:33] 2026-02-27 16:49:27,556 | INFO     | transexitcode: 0
[2026-02-27 11:50:33] 2026-02-27 16:49:27,557 | INFO     | exeerrorcode: 0
[2026-02-27 11:50:33] 2026-02-27 16:49:27,557 | INFO     | exeerrordiag: 
[2026-02-27 11:50:33] 2026-02-27 16:49:27,557 | INFO     | exitcode: 0
[2026-02-27 11:50:33] 2026-02-27 16:49:27,557 | INFO     | exitmsg: OK
[2026-02-27 11:50:33] 2026-02-27 16:49:27,557 | INFO     | cpuconsumptiontime: 43044 s
[2026-02-27 11:50:33] 2026-02-27 16:49:27,557 | INFO     | nevents: 400
[2026-02-27 11:50:33] 2026-02-27 16:49:27,558 | INFO     | neventsw: 0
[2026-02-27 11:50:33] 2026-02-27 16:49:27,558 | INFO     | pid: 21415
[2026-02-27 11:50:33] 2026-02-27 16:49:27,558 | INFO     | pgrp: 21415
[2026-02-27 11:50:33] 2026-02-27 16:49:27,558 | INFO     | corecount: 8
[2026-02-27 11:50:33] 2026-02-27 16:49:27,558 | INFO     | event service: False
[2026-02-27 11:50:33] 2026-02-27 16:49:27,558 | INFO     | sizes: {0: 2287198, 1: 2287659, 12: 2287659, 5813: 2314329, 5814: 2323327, 5818: 2323383, 5819: 2323705}
[2026-02-27 11:50:33] 2026-02-27 16:49:27,559 | INFO     | --------------------------------------------------
[2026-02-27 11:50:33] 2026-02-27 16:49:27,559 | INFO     | 
[2026-02-27 11:50:33] 2026-02-27 16:49:27,559 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-02-27 11:50:33] 2026-02-27 16:49:27,584 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-27 11:50:33] 2026-02-27 16:49:27,584 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-27 11:50:33] 2026-02-27 16:49:27,584 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-27 11:50:33] 2026-02-27 16:49:27,585 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-27 11:50:33] 2026-02-27 16:49:27,585 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-27 11:50:33] 2026-02-27 16:49:27,585 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-27 11:50:33] 2026-02-27 16:49:27,585 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-27 11:50:33] 2026-02-27 16:49:27,585 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-27 11:50:33] 2026-02-27 16:49:27,586 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-27 11:50:33] 2026-02-27 16:49:27,586 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-27 11:50:33] 2026-02-27 16:49:27,586 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-27 11:50:33] 2026-02-27 16:49:27,586 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-27 11:50:33] 2026-02-27 16:49:27,586 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-27 11:50:33] 2026-02-27 16:49:27,586 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-27 11:50:33] 2026-02-27 16:49:27,587 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-27 11:50:33] 2026-02-27 16:49:27,587 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-27 11:50:33] 2026-02-27 16:49:27,587 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-27 11:50:33] 2026-02-27 16:49:27,587 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-27 11:50:33] 2026-02-27 16:49:27,587 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-27 11:50:33] 2026-02-27 16:49:27,588 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-27 11:50:33] 2026-02-27 16:49:27,588 | INFO     | job 7031262798 has completed (purged errors)
[2026-02-27 11:50:33] 2026-02-27 16:49:27,588 | INFO     | overall cleanup function is called
[2026-02-27 11:50:33] 2026-02-27 16:49:28,597 | INFO     | --- collectZombieJob: --- 10, [21415]
[2026-02-27 11:50:33] 2026-02-27 16:49:28,597 | INFO     | zombie collector waiting for pid 21415
[2026-02-27 11:50:33] 2026-02-27 16:49:28,597 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-27 11:50:33] 2026-02-27 16:49:28,598 | INFO     | collected zombie processes
[2026-02-27 11:50:33] 2026-02-27 16:49:28,598 | INFO     | will attempt to kill all subprocesses of pid=21415
[2026-02-27 11:50:33] 2026-02-27 16:49:28,671 | INFO     | process IDs to be killed: [21415] (in reverse order)
[2026-02-27 11:50:33] 2026-02-27 16:49:28,716 | WARNING  | found no corresponding commands to process id(s)
[2026-02-27 11:50:33] 2026-02-27 16:49:28,716 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-27 11:50:33] 2026-02-27 16:49:28,720 | INFO     | did not find any defunct processes belonging to 21415
[2026-02-27 11:50:33] 2026-02-27 16:49:28,724 | INFO     | did not find any defunct processes belonging to 21415
[2026-02-27 11:50:33] 2026-02-27 16:49:28,724 | INFO     | ready for new job
[2026-02-27 11:50:33] 2026-02-27 16:49:28,724 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-27 11:50:33] 2026-02-27 16:49:28,726 | INFO     | **************************************
[2026-02-27 11:50:33] 2026-02-27 16:49:28,727 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-27 11:50:33] 2026-02-27 16:49:28,727 | INFO     | **************************************
[2026-02-27 11:50:33] 2026-02-27 16:49:28,727 | INFO     | 
[2026-02-27 11:50:33] 2026-02-27 16:49:28,728 | INFO     | architecture information:
[2026-02-27 11:50:33] 2026-02-27 16:49:28,728 | INFO     | executing command: cat /etc/os-release
[2026-02-27 11:50:33] 2026-02-27 16:49:28,745 | INFO     | cat /etc/os-release:
[2026-02-27 11:50:33] NAME="CentOS Linux"
[2026-02-27 11:50:33] VERSION="7 (Core)"
[2026-02-27 11:50:33] ID="centos"
[2026-02-27 11:50:33] ID_LIKE="rhel fedora"
[2026-02-27 11:50:33] VERSION_ID="7"
[2026-02-27 11:50:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-27 11:50:33] ANSI_COLOR="0;31"
[2026-02-27 11:50:33] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-27 11:50:33] HOME_URL="https://www.centos.org/"
[2026-02-27 11:50:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-27 11:50:33] 
[2026-02-27 11:50:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-27 11:50:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-27 11:50:33] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-27 11:50:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-27 11:50:33] 
[2026-02-27 11:50:33] 2026-02-27 16:49:28,746 | INFO     | **************************************
[2026-02-27 11:50:33] 2026-02-27 16:49:29,249 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-02-27 11:50:33] 2026-02-27 16:49:29,267 | INFO     | sufficient remaining disk space (18668847104 B)
[2026-02-27 11:50:33] 2026-02-27 16:49:29,267 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-27 11:50:33] 2026-02-27 16:49:29,268 | INFO     | current server update state: UPDATING_FINAL
[2026-02-27 11:50:33] 2026-02-27 16:49:29,268 | INFO     | update_server=False
[2026-02-27 11:50:33] 2026-02-27 16:49:29,268 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-27 11:50:33] 2026-02-27 16:49:29,269 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-27 11:50:33] 2026-02-27 16:49:29,269 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-27 11:50:33] 2026-02-27 16:49:29,332 | INFO     | all payload control threads have been joined
[2026-02-27 11:50:33] 2026-02-27 16:49:29,660 | INFO     | all data control threads have been joined
[2026-02-27 11:50:33] 2026-02-27 16:49:30,183 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-27 11:50:33] 2026-02-27 16:49:30,183 | INFO     | aborting loop
[2026-02-27 11:50:33] 2026-02-27 16:49:30,270 | INFO     | [job] queue monitor thread has finished
[2026-02-27 11:50:33] 2026-02-27 16:49:30,274 | INFO     | [job] retrieve thread has finished
[2026-02-27 11:50:33] 2026-02-27 16:49:30,337 | INFO     | [payload] control thread has finished
[2026-02-27 11:50:33] 2026-02-27 16:49:30,361 | INFO     | [data] copytool_in thread has finished
[2026-02-27 11:50:33] 2026-02-27 16:49:30,540 | INFO     | [payload] failed_post thread has finished
[2026-02-27 11:50:33] 2026-02-27 16:49:30,649 | INFO     | all job control threads have been joined
[2026-02-27 11:50:33] 2026-02-27 16:49:30,666 | INFO     | [data] control thread has finished
[2026-02-27 11:50:33] 2026-02-27 16:49:30,826 | INFO     | [payload] execute_payloads thread has finished
[2026-02-27 11:50:33] 2026-02-27 16:49:30,886 | INFO     | [job] validate thread has finished
[2026-02-27 11:50:33] 2026-02-27 16:49:31,189 | INFO     | [job] job monitor thread has finished
[2026-02-27 11:50:33] 2026-02-27 16:49:31,229 | INFO     | [payload] validate_pre thread has finished
[2026-02-27 11:50:33] 2026-02-27 16:49:31,232 | INFO     | [job] create_data_payload thread has finished
[2026-02-27 11:50:33] 2026-02-27 16:49:31,275 | INFO     | [data] copytool_out thread has finished
[2026-02-27 11:50:33] 2026-02-27 16:49:31,410 | INFO     | [payload] validate_post thread has finished
[2026-02-27 11:50:33] 2026-02-27 16:49:31,649 | INFO     | [job] control thread has finished
[2026-02-27 11:50:33] 2026-02-27 16:49:32,681 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-27 11:50:33] 2026-02-27 16:49:36,689 | INFO     | [data] queue_monitor thread has finished
[2026-02-27 11:50:33] 2026-02-27 16:49:40,225 | INFO     | job.realtimelogging is not enabled
[2026-02-27 11:50:33] 2026-02-27 16:49:41,230 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-27 11:50:33] 2026-02-27 16:49:58,094 | INFO     | 5839s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2026-02-27 11:50:33] 2026-02-27 16:49:59,184 | INFO     | PID=16967 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-02-27 11:50:33] 2026-02-27 16:49:59,184 | INFO     | found 0 job(s) in 20 queues
[2026-02-27 11:50:33] 2026-02-27 16:49:59,185 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-27 11:50:33] 2026-02-27 16:49:59,185 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-27 11:50:33] 2026-02-27 16:50:26,004 | INFO     | [monitor] cgroup control has ended
[2026-02-27 11:50:33] 2026-02-27 16:50:28,077 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140661608224576)>', '<ExcThread(monitor, started 140660438984448)>']
[2026-02-27 11:50:33] 2026-02-27 16:50:28,323 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-27 11:50:33] 2026-02-27 16:50:28,323 | INFO     | [monitor] control thread has ended
[2026-02-27 11:50:33] 2026-02-27 16:50:33,102 | INFO     | all workflow threads have been joined
[2026-02-27 11:50:33] 2026-02-27 16:50:33,103 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-27 11:50:33] 2026-02-27 16:50:33,103 | INFO     | traces error code: 0
[2026-02-27 11:50:33] 2026-02-27 16:50:33,104 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-27 11:50:33] 2026-02-27 16:50:33,218 [wrapper] ==== pilot stdout END ====
[2026-02-27 11:50:33] 2026-02-27 16:50:33,222 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-27 11:50:33] 2026-02-27 16:50:33,227 [wrapper] pilotpid: 16967
[2026-02-27 11:50:33] 2026-02-27 16:50:33,231 [wrapper] Pilot exit status: 0
[2026-02-27 11:50:33] 2026-02-27 16:50:33,252 [wrapper] pandaids: 7031262798
[2026-02-27 11:50:33] 2026-02-27 16:50:33,300 [wrapper] cleanup supervisor_pilot 28553 16968
[2026-02-27 11:50:33] 2026-02-27 16:50:33,305 [wrapper] Test setup, not cleaning
[2026-02-27 11:50:33] 2026-02-27 16:50:33,311 [wrapper] apfmon messages muted
[2026-02-27 11:50:33] 2026-02-27 16:50:33,316 [wrapper] ==== wrapper stdout END ====
[2026-02-27 11:50:33] 2026-02-27 16:50:33,322 [wrapper] ==== wrapper stderr END ====
[2026-02-27 11:50:33]  *** Error codes and diagnostics ***
[2026-02-27 11:50:33]     "exeErrorCode": 0,
[2026-02-27 11:50:33]     "exeErrorDiag": "",
[2026-02-27 11:50:33]     "pilotErrorCode": 0,
[2026-02-27 11:50:33]     "pilotErrorDiag": "",
[2026-02-27 11:50:33]  *** Listing of results directory ***
[2026-02-27 11:50:33] total 334452
[2026-02-27 11:50:33] -rw-r--r-- 1 boincer boincer    584627 Feb 27 00:46 pilot3.tar.gz
[2026-02-27 11:50:33] -rwx------ 1 boincer boincer     36322 Feb 27 00:47 runpilot2-wrapper.sh
[2026-02-27 11:50:33] -rw-r--r-- 1 boincer boincer      5111 Feb 27 00:48 queuedata.json
[2026-02-27 11:50:33] -rw-r--r-- 1 boincer boincer       100 Feb 27 10:11 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-27 11:50:33] -rwxr-xr-x 1 boincer boincer      7986 Feb 27 10:11 run_atlas
[2026-02-27 11:50:33] -rw-r--r-- 1 boincer boincer       105 Feb 27 10:11 job.xml
[2026-02-27 11:50:33] -rw-r--r-- 2 boincer boincer 190492400 Feb 27 10:11 EVNT.48700920._000008.pool.root.1
[2026-02-27 11:50:33] -rw-r--r-- 2 boincer boincer     15845 Feb 27 10:11 start_atlas.sh
[2026-02-27 11:50:33] drwxrwx--x 2 boincer boincer      4096 Feb 27 10:11 shared
[2026-02-27 11:50:33] -rw-r--r-- 2 boincer boincer    597929 Feb 27 10:11 input.tar.gz
[2026-02-27 11:50:33] -rw-r--r-- 1 boincer boincer         0 Feb 27 10:11 boinc_lockfile
[2026-02-27 11:50:33] -rw-r--r-- 1 boincer boincer      2514 Feb 27 10:11 pandaJob.out
[2026-02-27 11:50:33] -rw------- 1 boincer boincer        57 Feb 27 10:11 setup.sh.local
[2026-02-27 11:50:33] -rw------- 1 boincer boincer    998084 Feb 27 10:12 agis_schedconf.cvmfs.json
[2026-02-27 11:50:33] -rw------- 1 boincer boincer   1516111 Feb 27 10:12 agis_ddmendpoints.agis.ALL.json
[2026-02-27 11:50:33] -rw------- 1 boincer boincer       430 Feb 27 10:12 workernode_map.json
[2026-02-27 11:50:33] drwx------ 5 boincer boincer      4096 Feb 27 10:12 pilot3
[2026-02-27 11:50:33] -rw-r--r-- 1 boincer boincer      5908 Feb 27 11:48 init_data.xml
[2026-02-27 11:50:33] -rw------- 1 boincer boincer 145647338 Feb 27 11:48 HITS.48700922._000100.pool.root.1
[2026-02-27 11:50:33] -rw-r--r-- 1 boincer boincer       529 Feb 27 11:49 boinc_task_state.xml
[2026-02-27 11:50:33] -rw------- 1 boincer boincer        95 Feb 27 11:49 pilot_heartbeat.json
[2026-02-27 11:50:33] -rw------- 1 boincer boincer      1054 Feb 27 11:49 memory_monitor_summary.json
[2026-02-27 11:50:33] -rw------- 1 boincer boincer    360825 Feb 27 11:49 log.48700922._000100.job.log.tgz.1
[2026-02-27 11:50:33] -rw------- 1 boincer boincer      6401 Feb 27 11:49 heartbeat.json
[2026-02-27 11:50:33] -rw-r--r-- 1 boincer boincer      8192 Feb 27 11:50 boinc_mmap_file
[2026-02-27 11:50:33] -rw-r--r-- 1 boincer boincer        27 Feb 27 11:50 wrapper_checkpoint.txt
[2026-02-27 11:50:33] -rw------- 1 boincer boincer      4929 Feb 27 11:50 pilotlog.txt
[2026-02-27 11:50:33] -rw------- 1 boincer boincer    836048 Feb 27 11:50 log.48700922._000100.job.log.1
[2026-02-27 11:50:33] -rw------- 1 boincer boincer       357 Feb 27 11:50 output.list
[2026-02-27 11:50:33] -rw-r--r-- 1 boincer boincer       620 Feb 27 11:50 runtime_log
[2026-02-27 11:50:33] -rw------- 1 boincer boincer   1218560 Feb 27 11:50 result.tar.gz
[2026-02-27 11:50:33] -rw------- 1 boincer boincer       657 Feb 27 11:50 uJSMDmPs5F9n9Rq4apOajLDm4fhM0noT9bVooX4SDmYf2KDmwIy03n.diag
[2026-02-27 11:50:33] -rw-r--r-- 1 boincer boincer      9336 Feb 27 11:50 runtime_log.err
[2026-02-27 11:50:33] -rw-r--r-- 1 boincer boincer     21582 Feb 27 11:50 stderr.txt
[2026-02-27 11:50:33] HITS file was successfully produced:
[2026-02-27 11:50:33] -rw------- 1 boincer boincer 145647338 Feb 27 11:48 shared/HITS.pool.root.1
[2026-02-27 11:50:33]  *** Contents of shared directory: ***
[2026-02-27 11:50:33] total 330064
[2026-02-27 11:50:33] -rw-r--r-- 2 boincer boincer 190492400 Feb 27 10:11 ATLAS.root_0
[2026-02-27 11:50:33] -rw-r--r-- 2 boincer boincer     15845 Feb 27 10:11 start_atlas.sh
[2026-02-27 11:50:33] -rw-r--r-- 2 boincer boincer    597929 Feb 27 10:11 input.tar.gz
[2026-02-27 11:50:33] -rw------- 1 boincer boincer 145647338 Feb 27 11:48 HITS.pool.root.1
[2026-02-27 11:50:33] -rw------- 1 boincer boincer   1218560 Feb 27 11:50 result.tar.gz
11:50:34 (13239): run_atlas exited; CPU time 43006.499126
11:50:34 (13239): called boinc_finish(0)

</stderr_txt>
]]>

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