Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
2026-02-27 18:18:41 (15428): vboxwrapper version 26210
2026-02-27 18:18:41 (15428): BOINC client version: 7.24.1
2026-02-27 18:18:42 (15428): Detected: VirtualBox VboxManage Interface (Version: 7.0.12)
2026-02-27 18:18:42 (15428): Successfully copied 'init_data.xml' to the shared directory.
2026-02-27 18:18:42 (15428): Create VM. (boinc_c51cd36399229033, slot#0)
2026-02-27 18:18:43 (15428): Setting Memory Size for VM. (4800MB)
2026-02-27 18:18:43 (15428): Setting CPU Count for VM. (8)
2026-02-27 18:18:43 (15428): Setting Chipset Options for VM.
2026-02-27 18:18:43 (15428): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-02-27 18:18:44 (15428): Setting Boot Options for VM.
2026-02-27 18:18:44 (15428): Setting Network Configuration for NAT. (Driver: virtio)
2026-02-27 18:18:45 (15428): Enabling VM Network Access.
2026-02-27 18:18:45 (15428): Disabling USB Support for VM.
2026-02-27 18:18:45 (15428): Disabling COM Port Support for VM.
2026-02-27 18:18:45 (15428): Disabling LPT Port Support for VM.
2026-02-27 18:18:46 (15428): Disabling Audio Support for VM.
2026-02-27 18:18:46 (15428): Disabling Clipboard Support for VM.
2026-02-27 18:18:46 (15428): Disabling Drag and Drop Support for VM.
2026-02-27 18:18:46 (15428): Adding storage controller(s) to VM.
2026-02-27 18:18:47 (15428): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-02-27 18:18:49 (15428): Adding VirtualBox Guest Additions to VM.
2026-02-27 18:18:49 (15428): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-02-27 18:18:49 (15428): forwarding host port 60237 to guest port 80
2026-02-27 18:18:50 (15428): Enabling remote desktop for VM.
2026-02-27 18:18:50 (15428): Required extension pack not installed, remote desktop not enabled.
2026-02-27 18:18:50 (15428): Enabling shared directory for VM.
2026-02-27 18:18:50 (15428): Starting VM using VBoxManage interface. (boinc_c51cd36399229033, slot#0)
2026-02-27 18:18:56 (15428): Successfully started VM. (PID = '7108')
2026-02-27 18:18:56 (15428): Reporting VM Process ID to BOINC.
2026-02-27 18:18:56 (15428): Guest Log: BIOS: VirtualBox 7.0.12
2026-02-27 18:18:56 (15428): Guest Log: CPUID EDX: 0x178bfbff
2026-02-27 18:18:56 (15428): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-02-27 18:18:56 (15428): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-02-27 18:18:56 (15428): VM state change detected. (old = 'poweredoff', new = 'running')
2026-02-27 18:18:56 (15428): Detected: Web Application Enabled (http://localhost:60237)
2026-02-27 18:18:56 (15428): Preference change detected
2026-02-27 18:18:56 (15428): Setting CPU throttle for VM. (90%)
2026-02-27 18:18:56 (15428): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-02-27 18:18:58 (15428): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-02-27 18:18:58 (15428): Guest Log: BIOS: Booting from Hard Disk...
2026-02-27 18:19:01 (15428): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-02-27 18:19:01 (15428): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-02-27 18:19:01 (15428): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-02-27 18:19:01 (15428): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-02-27 18:19:01 (15428): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-02-27 18:19:01 (15428): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-02-27 18:19:01 (15428): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-02-27 18:19:01 (15428): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-02-27 18:19:01 (15428): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-02-27 18:19:01 (15428): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-02-27 18:19:01 (15428): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-02-27 18:19:01 (15428): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-02-27 18:19:01 (15428): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-02-27 18:19:01 (15428): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-02-27 18:19:01 (15428): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-02-27 18:19:01 (15428): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-02-27 18:19:01 (15428): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-02-27 18:19:01 (15428): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-02-27 18:19:01 (15428): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-02-27 18:19:01 (15428): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-02-27 18:19:01 (15428): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-02-27 18:19:01 (15428): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-02-27 18:19:01 (15428): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-02-27 18:19:01 (15428): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-02-27 18:19:01 (15428): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-02-27 18:19:01 (15428): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-02-27 18:19:01 (15428): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-02-27 18:19:01 (15428): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-02-27 18:19:01 (15428): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-02-27 18:19:01 (15428): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-02-27 18:19:01 (15428): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-02-27 18:19:01 (15428): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-02-27 18:19:05 (15428): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-02-27 18:19:05 (15428): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-02-27 18:19:10 (15428): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-02-27 18:19:10 (15428): Guest Log: 00:00:00.000107 main     Log opened 2026-02-27T18:19:08.637804000Z
2026-02-27 18:19:10 (15428): Guest Log: 00:00:00.000178 main     OS Product: Linux
2026-02-27 18:19:10 (15428): Guest Log: 00:00:00.000205 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-02-27 18:19:10 (15428): Guest Log: 00:00:00.000227 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-02-27 18:19:10 (15428): Guest Log: 00:00:00.000254 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-02-27 18:19:10 (15428): Guest Log: 00:00:00.000255 main     Process ID: 1372
2026-02-27 18:19:10 (15428): Guest Log: 00:00:00.000255 main     Package type: LINUX_64BITS_GENERIC
2026-02-27 18:19:10 (15428): Guest Log: 00:00:00.001112 main     5.2.32 r132073 started. Verbose level = 0
2026-02-27 18:19:10 (15428): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-02-27 18:19:10 (15428): Guest Log: [INFO] Mounting shared directory
2026-02-27 18:19:10 (15428): Guest Log: [INFO] Checking for init_data.xml
2026-02-27 18:19:15 (15428): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-02-27 18:19:15 (15428): Guest Log: [INFO] Detected branch: prod
2026-02-27 18:19:16 (15428): Guest Log: This is the prod version of the ATLAS job wrapper
2026-02-27 18:19:16 (15428): Guest Log: Copying input files
2026-02-27 18:19:17 (15428): Guest Log: Copied input files into RunAtlas.
2026-02-27 18:19:17 (15428): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-02-27 18:19:17 (15428): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-02-27 18:19:17 (15428): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-02-27 18:19:17 (15428): Guest Log: Further information can be found at the LHC@home message board.
2026-02-27 18:19:20 (15428): Guest Log: 00:00:10.002333 timesync vgsvcTimeSyncWorker: Radical guest time change: -3 588 931 553 000ns (GuestNow=1 772 212 759 708 224 000 ns GuestLast=1 772 216 348 639 777 000 ns fSetTimeLastLoop=true )
2026-02-27 18:20:15 (15428): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-02-27 18:20:15 (15428): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-02-27 18:20:15 (15428): Guest Log: 2.6.3.0 1649 1 30188 156703 3 1 3117743 4096001 0 65024 0 0 n/a 0 0 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2026-02-27 18:20:16 (15428): Guest Log: copied the webapp to /var/www
2026-02-27 18:20:16 (15428): Guest Log: ATHENA_PROC_NUMBER=8
2026-02-27 18:20:16 (15428): Guest Log: ATHENA_CORE_NUMBER=8
2026-02-27 18:20:16 (15428): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-02-27 18:20:16 (15428): Guest Log:  *** Starting ATLAS job. (PandaID=7031388924 taskID=48842792) ***
2026-02-27 19:59:00 (15428): Status Report: Elapsed Time: '6000.000000'
2026-02-27 19:59:00 (15428): Status Report: CPU Time: '39280.859375'
2026-02-27 20:30:03 (15428): VM state change detected. (old = 'running', new = 'paused')
2026-02-28 08:00:01 (15428): Guest Log: 02:10:52.599760 timesync vgsvcTimeSyncWorker: Radical host time change: 41 408 710 000 000ns (HostNow=1 772 262 000 987 000 000 ns HostLast=1 772 220 592 277 000 000 ns)
2026-02-28 08:00:01 (15428): VM state change detected. (old = 'paused', new = 'running')
2026-02-28 08:00:11 (15428): Guest Log: 02:11:02.600923 timesync vgsvcTimeSyncWorker: Radical guest time change: 41 408 683 171 000ns (GuestNow=1 772 262 010 988 384 000 ns GuestLast=1 772 220 602 305 213 000 ns fSetTimeLastLoop=true )
2026-02-28 08:45:07 (15428): VM state change detected. (old = 'running', new = 'paused')
2026-02-28 09:23:51 (15428): VM state change detected. (old = 'paused', new = 'running')
2026-02-28 09:23:56 (15428): Guest Log: 02:56:03.380520 timesync vgsvcTimeSyncWorker: Radical host time change: 2 333 968 000 000ns (HostNow=1 772 267 035 678 000 000 ns HostLast=1 772 264 701 710 000 000 ns)
2026-02-28 09:24:06 (15428): Guest Log: 02:56:13.382001 timesync vgsvcTimeSyncWorker: Radical guest time change: 2 333 974 167 000ns (GuestNow=1 772 267 045 710 644 000 ns GuestLast=1 772 264 711 736 477 000 ns fSetTimeLastLoop=true )
2026-02-28 09:47:51 (15428): Status Report: Elapsed Time: '12000.000000'
2026-02-28 09:47:51 (15428): Status Report: CPU Time: '81769.218750'
2026-02-28 10:04:10 (15428): Guest Log:  *** Job finished ***
2026-02-28 10:04:10 (15428): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-02-28 10:04:10 (15428): Guest Log: 2026-02-28 09:03:36,408 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-02-28 10:04:10 (15428): Guest Log: 2026-02-28 09:03:36,409 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-02-28 10:04:10 (15428): Guest Log: 2026-02-28 09:04:02,841 | INFO     | [monitor] cgroup control has ended
2026-02-28 10:04:10 (15428): Guest Log: 2026-02-28 09:04:02,984 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139832329619264)>', '<ExcThread(monitor, started 139831401223936)>']
2026-02-28 10:04:10 (15428): Guest Log: 2026-02-28 09:04:03,842 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-02-28 10:04:10 (15428): Guest Log: 2026-02-28 09:04:03,843 | INFO     | [monitor] control thread has ended
2026-02-28 10:04:10 (15428): Guest Log: 2026-02-28 09:04:07,990 | INFO     | all workflow threads have been joined
2026-02-28 10:04:10 (15428): Guest Log: 2026-02-28 09:04:07,991 | INFO     | end of generic workflow (traces error code: 0)
2026-02-28 10:04:10 (15428): Guest Log: 2026-02-28 09:04:07,993 | INFO     | traces error code: 0
2026-02-28 10:04:10 (15428): Guest Log: 2026-02-28 09:04:07,995 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-02-28 10:04:10 (15428): Guest Log: 2026-02-28 09:04:08,199 [wrapper] ==== pilot stdout END ====
2026-02-28 10:04:10 (15428): Guest Log: 2026-02-28 09:04:08,221 [wrapper] ==== wrapper stdout RESUME ====
2026-02-28 10:04:10 (15428): Guest Log: 2026-02-28 09:04:08,225 [wrapper] pilotpid: 6086
2026-02-28 10:04:10 (15428): Guest Log: 2026-02-28 09:04:08,230 [wrapper] Pilot exit status: 0
2026-02-28 10:04:10 (15428): Guest Log: 2026-02-28 09:04:08,389 [wrapper] pandaids: 7031388924
2026-02-28 10:04:10 (15428): Guest Log: 2026-02-28 09:04:08,460 [wrapper] cleanup supervisor_pilot 27970 6087
2026-02-28 10:04:10 (15428): Guest Log: 2026-02-28 09:04:08,489 [wrapper] Test setup, not cleaning
2026-02-28 10:04:10 (15428): Guest Log: 2026-02-28 09:04:08,539 [wrapper] apfmon messages muted
2026-02-28 10:04:10 (15428): Guest Log: 2026-02-28 09:04:08,546 [wrapper] ==== wrapper stdout END ====
2026-02-28 10:04:10 (15428): Guest Log: 2026-02-28 09:04:08,555 [wrapper] ==== wrapper stderr END ====
2026-02-28 10:04:10 (15428): Guest Log:  *** Error codes and diagnostics ***
2026-02-28 10:04:10 (15428): Guest Log:     "exeErrorCode": 0,
2026-02-28 10:04:10 (15428): Guest Log:     "exeErrorDiag": "",
2026-02-28 10:04:10 (15428): Guest Log:     "pilotErrorCode": 0,
2026-02-28 10:04:10 (15428): Guest Log:     "pilotErrorDiag": "",
2026-02-28 10:04:10 (15428): Guest Log:  *** Listing of results directory ***
2026-02-28 10:04:10 (15428): Guest Log: total 310808
2026-02-28 10:04:10 (15428): Guest Log: -rw-r--r--. 1 atlas atlas    584627 Feb 27 09:20 pilot3.tar.gz
2026-02-28 10:04:10 (15428): Guest Log: -rwx------. 1 atlas atlas     36322 Feb 27 09:21 runpilot2-wrapper.sh
2026-02-28 10:04:10 (15428): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Feb 27 09:21 queuedata.json
2026-02-28 10:04:10 (15428): Guest Log: -rwxr-xr-x. 1 atlas atlas      9190 Feb 27 17:19 init_data.xml
2026-02-28 10:04:10 (15428): Guest Log: -rwxr-xr-x. 1 atlas atlas    597954 Feb 27 17:19 input.tar.gz
2026-02-28 10:04:10 (15428): Guest Log: -rwxr-xr-x. 1 atlas atlas     15845 Feb 27 17:19 start_atlas.sh
2026-02-28 10:04:10 (15428): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Feb 27 17:19 EVNT.48449307._000003.pool.root.1 -> /data/./ATLAS.root_0
2026-02-28 10:04:10 (15428): Guest Log: -rw-r--r--. 1 atlas atlas      2606 Feb 27 17:20 pandaJob.out
2026-02-28 10:04:10 (15428): Guest Log: -rw-------. 1 atlas atlas    998782 Feb 27 17:20 agis_schedconf.cvmfs.json
2026-02-28 10:04:10 (15428): Guest Log: -rw-------. 1 atlas atlas       426 Feb 27 17:21 workernode_map.json
2026-02-28 10:04:10 (15428): Guest Log: drwx------. 5 atlas atlas      4096 Feb 27 17:21 pilot3
2026-02-28 10:04:10 (15428): Guest Log: -rw-------. 1 atlas atlas 309937469 Feb 28 09:02 HITS.48842792._000061.pool.root.1
2026-02-28 10:04:10 (15428): Guest Log: -rw-------. 1 atlas atlas      1035 Feb 28 09:02 memory_monitor_summary.json
2026-02-28 10:04:10 (15428): Guest Log: -rw-------. 1 atlas atlas   1513015 Feb 28 09:03 agis_ddmendpoints.agis.ALL.json
2026-02-28 10:04:10 (15428): Guest Log: -rw-------. 1 atlas atlas    442721 Feb 28 09:03 log.48842792._000061.job.log.tgz.1
2026-02-28 10:04:10 (15428): Guest Log: -rw-------. 1 atlas atlas      6368 Feb 28 09:03 heartbeat.json
2026-02-28 10:04:10 (15428): Guest Log: -rw-------. 1 atlas atlas        98 Feb 28 09:03 pilot_heartbeat.json
2026-02-28 10:04:10 (15428): Guest Log: -rw-------. 1 atlas atlas      4987 Feb 28 09:04 pilotlog.txt
2026-02-28 10:04:10 (15428): Guest Log: -rw-------. 1 atlas atlas   1792504 Feb 28 09:04 log.48842792._000061.job.log.1
2026-02-28 10:04:10 (15428): Guest Log: -rw-------. 1 atlas atlas       357 Feb 28 09:04 output.list
2026-02-28 10:04:10 (15428): Guest Log: -rw-r--r--. 1 atlas atlas       620 Feb 28 09:04 runtime_log
2026-02-28 10:04:10 (15428): Guest Log: -rw-------. 1 atlas atlas   2252800 Feb 28 09:04 result.tar.gz
2026-02-28 10:04:10 (15428): Guest Log: -rw-------. 1 atlas atlas       660 Feb 28 09:04 YbMMDmKD9F9n9Rq4apOajLDm4fhM0noT9bVooX4SDmCt2KDmLDYWbn.diag
2026-02-28 10:04:10 (15428): Guest Log: -rw-r--r--. 1 atlas atlas      8755 Feb 28 09:04 runtime_log.err
2026-02-28 10:04:10 (15428): Guest Log: Looking for outputfile HITS.48842792._000061.pool.root.1
2026-02-28 10:04:10 (15428): Guest Log: HITS file was successfully produced
2026-02-28 10:04:10 (15428): Guest Log: -rw-------. 1 atlas atlas 309937469 Feb 28 09:02 /home/atlas/RunAtlas/HITS.48842792._000061.pool.root.1
2026-02-28 10:04:13 (15428): Guest Log: Successfully finished the ATLAS job!
2026-02-28 10:04:13 (15428): Guest Log: Copying the results back to the shared directory!
2026-02-28 10:04:13 (15428): Guest Log:  *** Contents of shared directory: ***
2026-02-28 10:04:13 (15428): Guest Log: total 582708
2026-02-28 10:04:13 (15428): Guest Log: -rwxrwxrwx. 1 root root 283872971 Feb 27 17:18 ATLAS.root_0
2026-02-28 10:04:13 (15428): Guest Log: -rwxrwxrwx. 1 root root 309937469 Feb 28 09:04 HITS.pool.root.1
2026-02-28 10:04:13 (15428): Guest Log: -rwxrwxrwx. 1 root root      9190 Feb 27 17:18 init_data.xml
2026-02-28 10:04:13 (15428): Guest Log: -rwxrwxrwx. 1 root root    597954 Feb 27 14:12 input.tar.gz
2026-02-28 10:04:13 (15428): Guest Log: -rwxrwxrwx. 1 root root   2252800 Feb 28 09:04 result.tar.gz
2026-02-28 10:04:13 (15428): Guest Log: -rwxrwxrwx. 1 root root     15845 Feb 27 14:13 start_atlas.sh
2026-02-28 10:04:13 (15428): Guest Log:  *** Success! Shutting down the machine. ***
2026-02-28 10:04:13 (15428): VM Completion File Detected.
2026-02-28 10:04:13 (15428): Powering off VM.
2026-02-28 10:04:14 (15428): Successfully stopped VM.
2026-02-28 10:04:14 (15428): Deregistering VM. (boinc_c51cd36399229033, slot#0)
2026-02-28 10:04:14 (15428): Removing network bandwidth throttle group from VM.
2026-02-28 10:04:14 (15428): Removing VM from VirtualBox.
2026-02-28 10:04:20 (15428): called boinc_finish(0)

</stderr_txt>
]]>

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