Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
06:44:58 (347538): wrapper (7.7.26015): starting
06:44:58 (347538): wrapper: running run_atlas (--nthreads 8)
[2026-02-27 06:44:58] Arguments: --nthreads 8
[2026-02-27 06:44:58] Threads: 8
[2026-02-27 06:44:58] Checking for CVMFS
[2026-02-27 06:44:58] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-27 06:44:58] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-27 06:44:58] Running cvmfs_config stat atlas.cern.ch
[2026-02-27 06:44:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-27 06:44:59] 2.13.3.0 9651 94055 356568 156693 0 852 32337267 40960000 16364 16776704 0 156474481 99.607 195287188 37184 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-02-27 06:44:59] CVMFS is ok
[2026-02-27 06:44:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-27 06:44:59] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-27 06:44:59] Further information can be found at the LHC@home message board.
[2026-02-27 06:44:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-27 06:44:59] Checking for apptainer binary...
[2026-02-27 06:44:59] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-27 06:44:59] Running /usr/bin/apptainer --version
[2026-02-27 06:44:59] apptainer version 1.4.5-2.el9
[2026-02-27 06:44:59] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-27 06:45:00] c-210-35-4.aglt2.org
[2026-02-27 06:45:00] apptainer works
[2026-02-27 06:45:00] Set ATHENA_PROC_NUMBER=8
[2026-02-27 06:45:00] Set ATHENA_CORE_NUMBER=8
[2026-02-27 06:45:00] Starting ATLAS job with PandaID=7031199006
[2026-02-27 06:45:00] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-27 12:35:58]  *** The last 200 lines of the pilot log: ***
[2026-02-27 12:35:58] 2026-02-27 17:34:49,281 | INFO     | job 7031199006 has finished - writing final server update
[2026-02-27 12:35:58] 2026-02-27 17:34:49,286 | INFO     | total number of processed events: 400 (read)
[2026-02-27 12:35:58] 2026-02-27 17:34:49,303 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-7031199006/memory_monitor_summary.json (trf name=prmon)
[2026-02-27 12:35:58] 2026-02-27 17:34:49,304 | INFO     | extracted standard info from prmon json
[2026-02-27 12:35:58] 2026-02-27 17:34:49,304 | INFO     | extracted standard memory fields from prmon json
[2026-02-27 12:35:58] 2026-02-27 17:34:49,304 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-27 12:35:58] 2026-02-27 17:34:49,304 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-27 12:35:58] 2026-02-27 17:34:49,305 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-27 12:35:58] 2026-02-27 17:34:49,329 | INFO     | fitting pss+swap vs Time
[2026-02-27 12:35:58] 2026-02-27 17:34:49,333 | INFO     | sum of square deviations: 12404019118.830448
[2026-02-27 12:35:58] 2026-02-27 17:34:49,336 | INFO     | sum of deviations: 15360888191.000126
[2026-02-27 12:35:58] 2026-02-27 17:34:49,336 | INFO     | mean x: 1772203215.1637428
[2026-02-27 12:35:58] 2026-02-27 17:34:49,336 | INFO     | mean y: 2522641.0
[2026-02-27 12:35:58] 2026-02-27 17:34:49,336 | INFO     | intersect: -2192138232.952923
[2026-02-27 12:35:58] 2026-02-27 17:34:49,337 | INFO     | chi2: 3.3318811759698344
[2026-02-27 12:35:58] 2026-02-27 17:34:49,337 | INFO     | sum of square deviations: 11867934492.77749
[2026-02-27 12:35:58] 2026-02-27 17:34:49,343 | INFO     | sum of deviations: 62160265853.14244
[2026-02-27 12:35:58] 2026-02-27 17:34:49,344 | INFO     | mean x: 1772203062.6676557
[2026-02-27 12:35:58] 2026-02-27 17:34:49,344 | INFO     | mean y: 2535836.5727002965
[2026-02-27 12:35:58] 2026-02-27 17:34:49,344 | INFO     | intersect: -9279670227.862146
[2026-02-27 12:35:58] 2026-02-27 17:34:49,344 | INFO     | chi2: 1.7079652915397452
[2026-02-27 12:35:58] 2026-02-27 17:34:49,344 | INFO     | current chi2=1.7079652915397452 (change=48.73870941563228 %)
[2026-02-27 12:35:58] 2026-02-27 17:34:49,345 | INFO     | sum of square deviations: 11347483709.888521
[2026-02-27 12:35:58] 2026-02-27 17:34:49,351 | INFO     | sum of deviations: 61300646317.05722
[2026-02-27 12:35:58] 2026-02-27 17:34:49,352 | INFO     | mean x: 1772202910.1656628
[2026-02-27 12:35:58] 2026-02-27 17:34:49,352 | INFO     | mean y: 2535584.671686747
[2026-02-27 12:35:58] 2026-02-27 17:34:49,352 | INFO     | intersect: -9571144940.064848
[2026-02-27 12:35:58] 2026-02-27 17:34:49,352 | INFO     | chi2: 1.7083125173281128
[2026-02-27 12:35:58] 2026-02-27 17:34:49,352 | INFO     | current chi2=1.7083125173281128 (change=-0.020329791834038297 %)
[2026-02-27 12:35:58] 2026-02-27 17:34:49,352 | INFO     | right removable region: 331
[2026-02-27 12:35:58] 2026-02-27 17:34:49,353 | INFO     | sum of square deviations: 11867837504.094976
[2026-02-27 12:35:58] 2026-02-27 17:34:49,359 | INFO     | sum of deviations: -46849956213.88428
[2026-02-27 12:35:58] 2026-02-27 17:34:49,360 | INFO     | mean x: 1772203367.6735904
[2026-02-27 12:35:58] 2026-02-27 17:34:49,360 | INFO     | mean y: 2540242.6646884275
[2026-02-27 12:35:58] 2026-02-27 17:34:49,360 | INFO     | intersect: 6998562066.266286
[2026-02-27 12:35:58] 2026-02-27 17:34:49,360 | INFO     | chi2: 1.7065230998984415
[2026-02-27 12:35:58] 2026-02-27 17:34:49,361 | INFO     | current chi2=1.7065230998984415 (change=48.781994021689215 %)
[2026-02-27 12:35:58] 2026-02-27 17:34:49,365 | INFO     | sum of square deviations: 11347351037.156616
[2026-02-27 12:35:58] 2026-02-27 17:34:49,368 | INFO     | sum of deviations: -47610394196.9759
[2026-02-27 12:35:58] 2026-02-27 17:34:49,368 | INFO     | mean x: 1772203520.180723
[2026-02-27 12:35:58] 2026-02-27 17:34:49,368 | INFO     | mean y: 2540448.06626506
[2026-02-27 12:35:58] 2026-02-27 17:34:49,368 | INFO     | intersect: 7438223711.656836
[2026-02-27 12:35:58] 2026-02-27 17:34:49,369 | INFO     | chi2: 1.6892300269875973
[2026-02-27 12:35:58] 2026-02-27 17:34:49,380 | INFO     | current chi2=1.6892300269875973 (change=1.013351235144335 %)
[2026-02-27 12:35:58] 2026-02-27 17:34:49,380 | INFO     | left removable region: 20
[2026-02-27 12:35:58] 2026-02-27 17:34:49,380 | INFO     | sum of square deviations: 9327447959.485525
[2026-02-27 12:35:58] 2026-02-27 17:34:49,385 | INFO     | sum of deviations: 9845200176.874601
[2026-02-27 12:35:58] 2026-02-27 17:34:49,385 | INFO     | mean x: 1772203489.681672
[2026-02-27 12:35:58] 2026-02-27 17:34:49,385 | INFO     | mean y: 2550769.2411575564
[2026-02-27 12:35:58] 2026-02-27 17:34:49,385 | INFO     | intersect: -1868024996.5907376
[2026-02-27 12:35:58] 2026-02-27 17:34:49,385 | INFO     | chi2: 0.003460981953976232
[2026-02-27 12:35:58] 2026-02-27 17:34:49,386 | INFO     | current memory leak: 1.06 B/s (using 311 data points, chi2=0.00)
[2026-02-27 12:35:58] 2026-02-27 17:34:49,386 | INFO     | could have reported an average CPU frequency of 2956 MHz (15 samples)
[2026-02-27 12:35:58] 2026-02-27 17:34:49,386 | INFO     | ..............................
[2026-02-27 12:35:58] 2026-02-27 17:34:49,386 | INFO     | . Timing measurements:
[2026-02-27 12:35:58] 2026-02-27 17:34:49,387 | INFO     | . get job = 0 s
[2026-02-27 12:35:58] 2026-02-27 17:34:49,387 | INFO     | . initial setup = 27 s
[2026-02-27 12:35:58] 2026-02-27 17:34:49,387 | INFO     | . payload setup = 23 s
[2026-02-27 12:35:58] 2026-02-27 17:34:49,387 | INFO     | . stage-in = 0 s
[2026-02-27 12:35:58] 2026-02-27 17:34:49,387 | INFO     | . payload execution = 20862 s
[2026-02-27 12:35:58] 2026-02-27 17:34:49,387 | INFO     | . stage-out = 6 s
[2026-02-27 12:35:58] 2026-02-27 17:34:49,387 | INFO     | . log creation = 1 s
[2026-02-27 12:35:58] 2026-02-27 17:34:49,387 | INFO     | ..............................
[2026-02-27 12:35:58] 2026-02-27 17:34:49,776 | INFO     | 
[2026-02-27 12:35:58] 2026-02-27 17:34:49,776 | INFO     | job summary report
[2026-02-27 12:35:58] 2026-02-27 17:34:49,777 | INFO     | --------------------------------------------------
[2026-02-27 12:35:58] 2026-02-27 17:34:49,777 | INFO     | PanDA job id: 7031199006
[2026-02-27 12:35:58] 2026-02-27 17:34:49,777 | INFO     | task id: 48838581
[2026-02-27 12:35:58] 2026-02-27 17:34:49,778 | INFO     | errors: (none)
[2026-02-27 12:35:58] 2026-02-27 17:34:49,778 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-27 12:35:58] 2026-02-27 17:34:49,778 | INFO     | pilot state: finished 
[2026-02-27 12:35:58] 2026-02-27 17:34:49,778 | INFO     | transexitcode: 0
[2026-02-27 12:35:58] 2026-02-27 17:34:49,779 | INFO     | exeerrorcode: 0
[2026-02-27 12:35:58] 2026-02-27 17:34:49,779 | INFO     | exeerrordiag: 
[2026-02-27 12:35:58] 2026-02-27 17:34:49,779 | INFO     | exitcode: 0
[2026-02-27 12:35:58] 2026-02-27 17:34:49,781 | INFO     | exitmsg: OK
[2026-02-27 12:35:58] 2026-02-27 17:34:49,782 | INFO     | cpuconsumptiontime: 52078 s
[2026-02-27 12:35:58] 2026-02-27 17:34:49,782 | INFO     | nevents: 400
[2026-02-27 12:35:58] 2026-02-27 17:34:49,782 | INFO     | neventsw: 0
[2026-02-27 12:35:58] 2026-02-27 17:34:49,782 | INFO     | pid: 357586
[2026-02-27 12:35:58] 2026-02-27 17:34:49,782 | INFO     | pgrp: 357586
[2026-02-27 12:35:58] 2026-02-27 17:34:49,782 | INFO     | corecount: 8
[2026-02-27 12:35:58] 2026-02-27 17:34:49,782 | INFO     | event service: False
[2026-02-27 12:35:58] 2026-02-27 17:34:49,782 | INFO     | sizes: {0: 2287290, 1: 2287751, 13: 2287751, 20891: 2321205, 20892: 2321204, 20899: 2324861, 20902: 2325045, 20906: 2325239}
[2026-02-27 12:35:58] 2026-02-27 17:34:49,782 | INFO     | --------------------------------------------------
[2026-02-27 12:35:58] 2026-02-27 17:34:49,783 | INFO     | 
[2026-02-27 12:35:58] 2026-02-27 17:34:49,783 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-02-27 12:35:58] 2026-02-27 17:34:49,885 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-27 12:35:58] 2026-02-27 17:34:49,885 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-27 12:35:58] 2026-02-27 17:34:49,885 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-27 12:35:58] 2026-02-27 17:34:49,885 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-27 12:35:58] 2026-02-27 17:34:49,885 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-27 12:35:58] 2026-02-27 17:34:49,885 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-27 12:35:58] 2026-02-27 17:34:49,886 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-27 12:35:58] 2026-02-27 17:34:49,886 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-27 12:35:58] 2026-02-27 17:34:49,886 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-27 12:35:58] 2026-02-27 17:34:49,886 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-27 12:35:58] 2026-02-27 17:34:49,886 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-27 12:35:58] 2026-02-27 17:34:49,886 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-27 12:35:58] 2026-02-27 17:34:49,886 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-27 12:35:58] 2026-02-27 17:34:49,886 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-27 12:35:58] 2026-02-27 17:34:49,886 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-27 12:35:58] 2026-02-27 17:34:49,886 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-27 12:35:58] 2026-02-27 17:34:49,886 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-27 12:35:58] 2026-02-27 17:34:49,886 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-27 12:35:58] 2026-02-27 17:34:49,886 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-27 12:35:58] 2026-02-27 17:34:49,886 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-27 12:35:58] 2026-02-27 17:34:49,887 | INFO     | job 7031199006 has completed (purged errors)
[2026-02-27 12:35:58] 2026-02-27 17:34:49,887 | INFO     | overall cleanup function is called
[2026-02-27 12:35:58] 2026-02-27 17:34:50,935 | INFO     | --- collectZombieJob: --- 10, [357586]
[2026-02-27 12:35:58] 2026-02-27 17:34:50,935 | INFO     | zombie collector waiting for pid 357586
[2026-02-27 12:35:58] 2026-02-27 17:34:50,935 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-27 12:35:58] 2026-02-27 17:34:50,936 | INFO     | collected zombie processes
[2026-02-27 12:35:58] 2026-02-27 17:34:50,936 | INFO     | will attempt to kill all subprocesses of pid=357586
[2026-02-27 12:35:58] 2026-02-27 17:34:51,816 | INFO     | PID=351893 has CPU usage=9.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-02-27 12:35:58] 2026-02-27 17:34:51,816 | INFO     | .. there are 17 such processes running
[2026-02-27 12:35:58] 2026-02-27 17:34:52,149 | INFO     | process IDs to be killed: [357586] (in reverse order)
[2026-02-27 12:35:58] 2026-02-27 17:34:52,375 | WARNING  | found no corresponding commands to process id(s)
[2026-02-27 12:35:58] 2026-02-27 17:34:52,375 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-27 12:35:58] 2026-02-27 17:34:52,399 | INFO     | did not find any defunct processes belonging to 357586
[2026-02-27 12:35:58] 2026-02-27 17:34:52,419 | INFO     | did not find any defunct processes belonging to 357586
[2026-02-27 12:35:58] 2026-02-27 17:34:52,419 | INFO     | ready for new job
[2026-02-27 12:35:58] 2026-02-27 17:34:52,423 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-27 12:35:58] 2026-02-27 17:34:52,426 | INFO     | **************************************
[2026-02-27 12:35:58] 2026-02-27 17:34:52,427 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-27 12:35:58] 2026-02-27 17:34:52,427 | INFO     | **************************************
[2026-02-27 12:35:58] 2026-02-27 17:34:52,427 | INFO     | 
[2026-02-27 12:35:58] 2026-02-27 17:34:52,439 | INFO     | architecture information:
[2026-02-27 12:35:58] 2026-02-27 17:34:52,440 | INFO     | executing command: cat /etc/os-release
[2026-02-27 12:35:58] 2026-02-27 17:34:52,493 | INFO     | cat /etc/os-release:
[2026-02-27 12:35:58] NAME="CentOS Linux"
[2026-02-27 12:35:58] VERSION="7 (Core)"
[2026-02-27 12:35:58] ID="centos"
[2026-02-27 12:35:58] ID_LIKE="rhel fedora"
[2026-02-27 12:35:58] VERSION_ID="7"
[2026-02-27 12:35:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-27 12:35:58] ANSI_COLOR="0;31"
[2026-02-27 12:35:58] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-27 12:35:58] HOME_URL="https://www.centos.org/"
[2026-02-27 12:35:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-27 12:35:58] 
[2026-02-27 12:35:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-27 12:35:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-27 12:35:58] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-27 12:35:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-27 12:35:58] 
[2026-02-27 12:35:58] 2026-02-27 17:34:52,494 | INFO     | **************************************
[2026-02-27 12:35:58] 2026-02-27 17:34:52,998 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-02-27 12:35:58] 2026-02-27 17:34:53,238 | INFO     | sufficient remaining disk space (73870082048 B)
[2026-02-27 12:35:58] 2026-02-27 17:34:53,238 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-27 12:35:58] 2026-02-27 17:34:53,239 | INFO     | current server update state: UPDATING_FINAL
[2026-02-27 12:35:58] 2026-02-27 17:34:53,239 | INFO     | update_server=False
[2026-02-27 12:35:58] 2026-02-27 17:34:53,239 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-27 12:35:58] 2026-02-27 17:34:53,327 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-27 12:35:58] 2026-02-27 17:34:53,713 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-27 12:35:58] 2026-02-27 17:34:53,714 | INFO     | aborting loop
[2026-02-27 12:35:58] 2026-02-27 17:34:53,746 | INFO     | all data control threads have been joined
[2026-02-27 12:35:58] 2026-02-27 17:34:53,805 | INFO     | all payload control threads have been joined
[2026-02-27 12:35:58] 2026-02-27 17:34:54,245 | INFO     | [job] retrieve thread has finished
[2026-02-27 12:35:58] 2026-02-27 17:34:54,390 | INFO     | [payload] validate_post thread has finished
[2026-02-27 12:35:58] 2026-02-27 17:34:54,486 | INFO     | all job control threads have been joined
[2026-02-27 12:35:58] 2026-02-27 17:34:54,558 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-27 12:35:58] 2026-02-27 17:34:54,564 | INFO     | [payload] failed_post thread has finished
[2026-02-27 12:35:58] 2026-02-27 17:34:54,719 | INFO     | [job] job monitor thread has finished
[2026-02-27 12:35:58] 2026-02-27 17:34:54,752 | INFO     | [data] control thread has finished
[2026-02-27 12:35:58] 2026-02-27 17:34:54,811 | INFO     | [payload] control thread has finished
[2026-02-27 12:35:58] 2026-02-27 17:34:54,831 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-27 12:35:58] 2026-02-27 17:34:54,851 | INFO     | [payload] validate_pre thread has finished
[2026-02-27 12:35:58] 2026-02-27 17:34:54,976 | INFO     | [payload] execute_payloads thread has finished
[2026-02-27 12:35:58] 2026-02-27 17:34:55,193 | INFO     | [job] create_data_payload thread has finished
[2026-02-27 12:35:58] 2026-02-27 17:34:55,346 | INFO     | [data] copytool_out thread has finished
[2026-02-27 12:35:58] 2026-02-27 17:34:55,492 | INFO     | [job] control thread has finished
[2026-02-27 12:35:58] 2026-02-27 17:34:55,625 | INFO     | [job] validate thread has finished
[2026-02-27 12:35:58] 2026-02-27 17:34:55,640 | INFO     | [data] copytool_in thread has finished
[2026-02-27 12:35:58] 2026-02-27 17:34:55,842 | INFO     | [job] queue monitor thread has finished
[2026-02-27 12:35:58] 2026-02-27 17:34:56,406 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-27 12:35:58] 2026-02-27 17:35:00,421 | INFO     | [data] queue_monitor thread has finished
[2026-02-27 12:35:58] 2026-02-27 17:35:27,884 | INFO     | PID=351893 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-02-27 12:35:58] 2026-02-27 17:35:27,884 | INFO     | .. there are 17 such processes running
[2026-02-27 12:35:58] 2026-02-27 17:35:27,885 | INFO     | found 0 job(s) in 20 queues
[2026-02-27 12:35:58] 2026-02-27 17:35:27,885 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-27 12:35:58] 2026-02-27 17:35:27,885 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-27 12:35:58] 2026-02-27 17:35:48,195 | INFO     | [monitor] cgroup control has ended
[2026-02-27 12:35:58] 2026-02-27 17:35:50,081 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140178999740224)>', '<ExcThread(monitor, started 140178647664384)>']
[2026-02-27 12:35:58] 2026-02-27 17:35:51,059 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-27 12:35:58] 2026-02-27 17:35:51,059 | INFO     | [monitor] control thread has ended
[2026-02-27 12:35:58] 2026-02-27 17:35:55,149 | INFO     | all workflow threads have been joined
[2026-02-27 12:35:58] 2026-02-27 17:35:55,169 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-27 12:35:58] 2026-02-27 17:35:55,170 | INFO     | traces error code: 0
[2026-02-27 12:35:58] 2026-02-27 17:35:55,192 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-27 12:35:58] 2026-02-27 17:35:56,998 [wrapper] ==== pilot stdout END ====
[2026-02-27 12:35:58] 2026-02-27 17:35:57,051 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-27 12:35:58] 2026-02-27 17:35:57,136 [wrapper] pilotpid: 351893
[2026-02-27 12:35:58] 2026-02-27 17:35:57,186 [wrapper] Pilot exit status: 0
[2026-02-27 12:35:58] 2026-02-27 17:35:57,349 [wrapper] pandaids: 7031199006
[2026-02-27 12:35:58] 2026-02-27 17:35:58,027 [wrapper] cleanup supervisor_pilot 1113895 351894
[2026-02-27 12:35:58] 2026-02-27 17:35:58,056 [wrapper] Test setup, not cleaning
[2026-02-27 12:35:58] 2026-02-27 17:35:58,070 [wrapper] apfmon messages muted
[2026-02-27 12:35:58] 2026-02-27 17:35:58,073 [wrapper] ==== wrapper stdout END ====
[2026-02-27 12:35:58] 2026-02-27 17:35:58,076 [wrapper] ==== wrapper stderr END ====
[2026-02-27 12:35:58]  *** Error codes and diagnostics ***
[2026-02-27 12:35:58]     "exeErrorCode": 0,
[2026-02-27 12:35:58]     "exeErrorDiag": "",
[2026-02-27 12:35:58]     "pilotErrorCode": 0,
[2026-02-27 12:35:58]     "pilotErrorDiag": "",
[2026-02-27 12:35:58]  *** Listing of results directory ***
[2026-02-27 12:35:58] total 515836
[2026-02-27 12:35:58] -rw-r--r--. 1 boincer umatlas    584627 Feb 26 23:02 pilot3.tar.gz
[2026-02-27 12:35:58] -rwx------. 1 boincer umatlas     36322 Feb 26 23:05 runpilot2-wrapper.sh
[2026-02-27 12:35:58] -rw-r--r--. 1 boincer umatlas      5111 Feb 26 23:08 queuedata.json
[2026-02-27 12:35:58] -rw-r--r--. 1 boincer umatlas       100 Feb 27 06:44 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-27 12:35:58] -rwxr-xr-x. 1 boincer umatlas      7986 Feb 27 06:44 run_atlas
[2026-02-27 12:35:58] -rw-r--r--. 1 boincer umatlas       105 Feb 27 06:44 job.xml
[2026-02-27 12:35:58] -rw-r--r--. 2 boincer umatlas 289931513 Feb 27 06:44 EVNT.48220205._000064.pool.root.1
[2026-02-27 12:35:58] -rw-r--r--. 2 boincer umatlas     15845 Feb 27 06:44 start_atlas.sh
[2026-02-27 12:35:58] drwxrwx--x. 2 boincer umatlas      4096 Feb 27 06:44 shared
[2026-02-27 12:35:58] -rw-r--r--. 2 boincer umatlas    597971 Feb 27 06:44 input.tar.gz
[2026-02-27 12:35:58] -rw-r--r--. 1 boincer umatlas         0 Feb 27 06:44 boinc_lockfile
[2026-02-27 12:35:58] -rw-r--r--. 1 boincer umatlas      2587 Feb 27 06:45 pandaJob.out
[2026-02-27 12:35:58] -rw-------. 1 boincer umatlas        57 Feb 27 06:45 setup.sh.local
[2026-02-27 12:35:58] -rw-------. 1 boincer umatlas    998473 Feb 27 06:45 agis_schedconf.cvmfs.json
[2026-02-27 12:35:58] -rw-------. 1 boincer umatlas       442 Feb 27 06:46 workernode_map.json
[2026-02-27 12:35:58] drwx------. 5 boincer umatlas      4096 Feb 27 06:46 pilot3
[2026-02-27 12:35:58] -rw-r--r--. 1 boincer umatlas      6842 Feb 27 12:28 init_data.xml
[2026-02-27 12:35:58] -rw-------. 1 boincer umatlas 228082617 Feb 27 12:32 HITS.48838581._001280.pool.root.1
[2026-02-27 12:35:58] -rw-r--r--. 1 boincer umatlas       531 Feb 27 12:32 boinc_task_state.xml
[2026-02-27 12:35:58] -rw-------. 1 boincer umatlas      1042 Feb 27 12:34 memory_monitor_summary.json
[2026-02-27 12:35:58] -rw-------. 1 boincer umatlas   1513015 Feb 27 12:34 agis_ddmendpoints.agis.ALL.json
[2026-02-27 12:35:58] -rw-------. 1 boincer umatlas    525025 Feb 27 12:34 log.48838581._001280.job.log.tgz.1
[2026-02-27 12:35:58] -rw-------. 1 boincer umatlas      6393 Feb 27 12:34 heartbeat.json
[2026-02-27 12:35:58] -rw-------. 1 boincer umatlas        95 Feb 27 12:35 pilot_heartbeat.json
[2026-02-27 12:35:58] -rw-------. 1 boincer umatlas      4819 Feb 27 12:35 pilotlog.txt
[2026-02-27 12:35:58] -rw-r--r--. 1 boincer umatlas      8192 Feb 27 12:35 boinc_mmap_file
[2026-02-27 12:35:58] -rw-r--r--. 1 boincer umatlas        28 Feb 27 12:35 wrapper_checkpoint.txt
[2026-02-27 12:35:58] -rw-------. 1 boincer umatlas   2607956 Feb 27 12:35 log.48838581._001280.job.log.1
[2026-02-27 12:35:58] -rw-------. 1 boincer umatlas       357 Feb 27 12:35 output.list
[2026-02-27 12:35:58] -rw-r--r--. 1 boincer umatlas       620 Feb 27 12:35 runtime_log
[2026-02-27 12:35:58] -rw-------. 1 boincer umatlas   3153920 Feb 27 12:35 result.tar.gz
[2026-02-27 12:35:58] -rw-r--r--. 1 boincer umatlas      9352 Feb 27 12:35 runtime_log.err
[2026-02-27 12:35:58] -rw-------. 1 boincer umatlas       657 Feb 27 12:35 jeALDmwH4F9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmZP4KDmpprgvn.diag
[2026-02-27 12:35:58] -rw-r--r--. 1 boincer umatlas     21238 Feb 27 12:35 stderr.txt
[2026-02-27 12:35:58] HITS file was successfully produced:
[2026-02-27 12:35:59] -rw-------. 1 boincer umatlas 228082617 Feb 27 12:32 shared/HITS.pool.root.1
[2026-02-27 12:35:59]  *** Contents of shared directory: ***
[2026-02-27 12:35:59] total 509564
[2026-02-27 12:35:59] -rw-r--r--. 2 boincer umatlas 289931513 Feb 27 06:44 ATLAS.root_0
[2026-02-27 12:35:59] -rw-r--r--. 2 boincer umatlas     15845 Feb 27 06:44 start_atlas.sh
[2026-02-27 12:35:59] -rw-r--r--. 2 boincer umatlas    597971 Feb 27 06:44 input.tar.gz
[2026-02-27 12:35:59] -rw-------. 1 boincer umatlas 228082617 Feb 27 12:32 HITS.pool.root.1
[2026-02-27 12:35:59] -rw-------. 1 boincer umatlas   3153920 Feb 27 12:35 result.tar.gz
12:36:00 (347538): run_atlas exited; CPU time 52643.232683
12:36:00 (347538): called boinc_finish(0)

</stderr_txt>
]]>

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