Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
14:50:18 (663306): wrapper (7.7.26015): starting
14:50:18 (663306): wrapper: running run_atlas (--nthreads 3)
[2026-02-28 14:50:18] Arguments: --nthreads 3
[2026-02-28 14:50:18] Threads: 3
[2026-02-28 14:50:18] Checking for CVMFS
[2026-02-28 14:50:18] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-28 14:50:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-28 14:50:19] Running cvmfs_config stat atlas.cern.ch
[2026-02-28 14:50:19] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-28 14:50:19] 2.9.2.0 41941 4403 83052 156734 3 50 22642734 36864001 0 130560 0 1769457 99.981 172338 13211 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-02-28 14:50:19] CVMFS is ok
[2026-02-28 14:50:19] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-28 14:50:19] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-28 14:50:19] Further information can be found at the LHC@home message board.
[2026-02-28 14:50:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-28 14:50:19] Checking for apptainer binary...
[2026-02-28 14:50:19] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-28 14:50:19] Running /usr/bin/apptainer --version
[2026-02-28 14:50:19] apptainer version 1.4.1-1.1
[2026-02-28 14:50:19] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-28 14:50:19] thA373
[2026-02-28 14:50:19] apptainer works
[2026-02-28 14:50:19] Set ATHENA_PROC_NUMBER=3
[2026-02-28 14:50:19] Set ATHENA_CORE_NUMBER=3
[2026-02-28 14:50:19] Starting ATLAS job with PandaID=7031198983
[2026-02-28 14:50:19] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-28 16:26:42]  *** The last 200 lines of the pilot log: ***
[2026-02-28 16:26:42] 2026-02-28 15:25:56,654 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-28 16:26:42] 2026-02-28 15:25:56,835 | INFO     | [job] retrieve thread has finished
[2026-02-28 16:26:42] 2026-02-28 15:25:56,835 | INFO     | [job] queue monitor thread has finished
[2026-02-28 16:26:42] 2026-02-28 15:25:56,836 | INFO     | [job] job monitor thread has finished
[2026-02-28 16:26:42] 2026-02-28 15:25:56,990 | INFO     | [payload] validate_post thread has finished
[2026-02-28 16:26:42] 2026-02-28 15:25:57,057 | INFO     | [payload] failed_post thread has finished
[2026-02-28 16:26:42] 2026-02-28 15:25:57,074 | INFO     | [job] control thread has finished
[2026-02-28 16:26:42] 2026-02-28 15:25:57,330 | INFO     | all payload control threads have been joined
[2026-02-28 16:26:42] 2026-02-28 15:25:57,575 | INFO     | [data] control thread has finished
[2026-02-28 16:26:42] 2026-02-28 15:25:57,660 | INFO     | [job] create_data_payload thread has finished
[2026-02-28 16:26:42] 2026-02-28 15:25:57,724 | INFO     | [job] validate thread has finished
[2026-02-28 16:26:42] 2026-02-28 15:25:57,788 | INFO     | [payload] validate_pre thread has finished
[2026-02-28 16:26:42] 2026-02-28 15:25:57,922 | INFO     | [data] copytool_in thread has finished
[2026-02-28 16:26:42] 2026-02-28 15:25:58,266 | INFO     | [payload] execute_payloads thread has finished
[2026-02-28 16:26:42] 2026-02-28 15:25:58,336 | INFO     | [payload] control thread has finished
[2026-02-28 16:26:42] 2026-02-28 15:25:58,660 | INFO     | [data] copytool_out thread has finished
[2026-02-28 16:26:42] 2026-02-28 15:25:59,837 | INFO     | [data] queue_monitor thread has finished
[2026-02-28 16:26:42] 2026-02-28 15:26:05,858 | INFO     | job.realtimelogging is not enabled
[2026-02-28 16:26:42] 2026-02-28 15:26:06,864 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-28 16:26:42] 2026-02-28 15:26:25,793 | INFO     | PID=667342 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-02-28 16:26:42] 2026-02-28 15:26:25,793 | INFO     | found 0 job(s) in 20 queues
[2026-02-28 16:26:42] 2026-02-28 15:26:25,793 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-28 16:26:42] 2026-02-28 15:26:25,793 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-28 16:26:42] 2026-02-28 15:26:35,705 | INFO     | [monitor] cgroup control has ended
[2026-02-28 16:26:42] 2026-02-28 15:26:37,538 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140014535247680)>', '<ExcThread(monitor, started 140013920581376)>']
[2026-02-28 16:26:42] 2026-02-28 15:26:37,856 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-28 16:26:42] 2026-02-28 15:26:37,857 | INFO     | [monitor] control thread has ended
[2026-02-28 16:26:42] 2026-02-28 15:26:42,546 | INFO     | all workflow threads have been joined
[2026-02-28 16:26:42] 2026-02-28 15:26:42,546 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-28 16:26:42] 2026-02-28 15:26:42,546 | INFO     | traces error code: 0
[2026-02-28 16:26:42] 2026-02-28 15:26:42,547 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-28 16:26:42] 2026-02-28 15:26:42,597 [wrapper] ==== pilot stdout END ====
[2026-02-28 16:26:42] 2026-02-28 15:26:42,599 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-28 16:26:42] 2026-02-28 15:26:42,602 [wrapper] pilotpid: 667342
[2026-02-28 16:26:42] 2026-02-28 15:26:42,604 [wrapper] Pilot exit status: 0
[2026-02-28 16:26:42] 2026-02-28 15:26:42,611 [wrapper] pandaids: 7031198983
[2026-02-28 16:26:42] 2026-02-28 15:26:42,627 [wrapper] cleanup supervisor_pilot  676955 667343
[2026-02-28 16:26:42] 2026-02-28 15:26:42,629 [wrapper] Test setup, not cleaning
[2026-02-28 16:26:42] 2026-02-28 15:26:42,631 [wrapper] apfmon messages muted
[2026-02-28 16:26:42] 2026-02-28 15:26:42,634 [wrapper] ==== wrapper stdout END ====
[2026-02-28 16:26:42] 2026-02-28 15:26:42,636 [wrapper] ==== wrapper stderr END ====
[2026-02-28 16:26:42]  *** Error codes and diagnostics ***
[2026-02-28 16:26:42]     "exeErrorCode": 0,
[2026-02-28 16:26:42]     "exeErrorDiag": "",
[2026-02-28 16:26:42]     "pilotErrorCode": 0,
[2026-02-28 16:26:42]     "pilotErrorDiag": "",
[2026-02-28 16:26:42]  *** Listing of results directory ***
[2026-02-28 16:26:42] total 510172
[2026-02-28 16:26:42] -rw-r--r-- 1 boinc boinc    584627 Feb 27 05:02 pilot3.tar.gz
[2026-02-28 16:26:42] -rwx------ 1 boinc boinc     36322 Feb 27 05:05 runpilot2-wrapper.sh
[2026-02-28 16:26:42] -rw-r--r-- 1 boinc boinc      5111 Feb 27 05:08 queuedata.json
[2026-02-28 16:26:42] -rw-r--r-- 1 boinc boinc       100 Feb 28 14:50 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-28 16:26:42] -rwxr-xr-x 1 boinc boinc      7986 Feb 28 14:50 run_atlas
[2026-02-28 16:26:42] -rw-r--r-- 1 boinc boinc       105 Feb 28 14:50 job.xml
[2026-02-28 16:26:42] -rw-r--r-- 2 boinc boinc 291580142 Feb 28 14:50 EVNT.48220205._000063.pool.root.1
[2026-02-28 16:26:42] -rw-r--r-- 2 boinc boinc    597964 Feb 28 14:50 input.tar.gz
[2026-02-28 16:26:42] -rw-r--r-- 2 boinc boinc     15845 Feb 28 14:50 start_atlas.sh
[2026-02-28 16:26:42] drwxrwx--x 2 boinc boinc      4096 Feb 28 14:50 shared
[2026-02-28 16:26:42] -rw-r--r-- 1 boinc boinc         0 Feb 28 14:50 boinc_setup_complete
[2026-02-28 16:26:42] -rw-r--r-- 1 boinc boinc      6439 Feb 28 14:50 init_data.xml
[2026-02-28 16:26:42] -rw-r--r-- 1 boinc boinc         0 Feb 28 14:50 boinc_lockfile
[2026-02-28 16:26:42] -rw-r--r-- 1 boinc boinc      2587 Feb 28 14:50 pandaJob.out
[2026-02-28 16:26:42] -rw------- 1 boinc boinc    998790 Feb 28 14:50 agis_schedconf.cvmfs.json
[2026-02-28 16:26:42] -rw------- 1 boinc boinc   1513015 Feb 28 14:50 agis_ddmendpoints.agis.ALL.json
[2026-02-28 16:26:42] -rw------- 1 boinc boinc       427 Feb 28 14:50 workernode_map.json
[2026-02-28 16:26:42] drwx------ 5 boinc boinc      4096 Feb 28 14:50 pilot3
[2026-02-28 16:26:42] -rw------- 1 boinc boinc 224748544 Feb 28 16:25 HITS.48838581._001257.pool.root.1
[2026-02-28 16:26:42] -rw-r--r-- 1 boinc boinc       529 Feb 28 16:25 boinc_task_state.xml
[2026-02-28 16:26:42] -rw------- 1 boinc boinc      1020 Feb 28 16:25 memory_monitor_summary.json
[2026-02-28 16:26:42] -rw------- 1 boinc boinc    256454 Feb 28 16:25 log.48838581._001257.job.log.tgz.1
[2026-02-28 16:26:42] -rw------- 1 boinc boinc        95 Feb 28 16:25 pilot_heartbeat.json
[2026-02-28 16:26:42] -rw------- 1 boinc boinc      6321 Feb 28 16:25 heartbeat.json
[2026-02-28 16:26:42] -rw-r--r-- 1 boinc boinc      8192 Feb 28 16:26 boinc_mmap_file
[2026-02-28 16:26:42] -rw-r--r-- 1 boinc boinc        27 Feb 28 16:26 wrapper_checkpoint.txt
[2026-02-28 16:26:42] -rw------- 1 boinc boinc      4819 Feb 28 16:26 pilotlog.txt
[2026-02-28 16:26:42] -rw------- 1 boinc boinc    831341 Feb 28 16:26 log.48838581._001257.job.log.1
[2026-02-28 16:26:42] -rw------- 1 boinc boinc       357 Feb 28 16:26 output.list
[2026-02-28 16:26:42] -rw-r--r-- 1 boinc boinc       620 Feb 28 16:26 runtime_log
[2026-02-28 16:26:42] -rw------- 1 boinc boinc   1105920 Feb 28 16:26 result.tar.gz
[2026-02-28 16:26:42] -rw-r--r-- 1 boinc boinc      8896 Feb 28 16:26 runtime_log.err
[2026-02-28 16:26:42] -rw------- 1 boinc boinc       657 Feb 28 16:26 m1kKDmwH4F9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmDP4KDmdgVZon.diag
[2026-02-28 16:26:42] -rw-r--r-- 1 boinc boinc      6621 Feb 28 16:26 stderr.txt
[2026-02-28 16:26:42] HITS file was successfully produced:
[2026-02-28 16:26:42] -rw------- 1 boinc boinc 224748544 Feb 28 16:25 shared/HITS.pool.root.1
[2026-02-28 16:26:42]  *** Contents of shared directory: ***
[2026-02-28 16:26:42] total 505920
[2026-02-28 16:26:42] -rw-r--r-- 2 boinc boinc 291580142 Feb 28 14:50 ATLAS.root_0
[2026-02-28 16:26:42] -rw-r--r-- 2 boinc boinc    597964 Feb 28 14:50 input.tar.gz
[2026-02-28 16:26:42] -rw-r--r-- 2 boinc boinc     15845 Feb 28 14:50 start_atlas.sh
[2026-02-28 16:26:42] -rw------- 1 boinc boinc 224748544 Feb 28 16:25 HITS.pool.root.1
[2026-02-28 16:26:42] -rw------- 1 boinc boinc   1105920 Feb 28 16:26 result.tar.gz
16:26:43 (663306): run_atlas exited; CPU time 16490.216721
16:26:43 (663306): called boinc_finish(0)

</stderr_txt>
]]>

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