Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
2026-02-27 12:22:01 (409329): vboxwrapper version 26210
2026-02-27 12:22:01 (409329): BOINC client version: 8.2.8
2026-02-27 12:22:01 (409329): Detected: VirtualBox VboxManage Interface (Version: 7.2.4)
2026-02-27 12:22:01 (409329): Successfully copied 'init_data.xml' to the shared directory.
2026-02-27 12:22:01 (409329): Create VM. (boinc_75f40ec2d56045a3, slot#5)
2026-02-27 12:22:02 (409329): Setting Memory Size for VM. (4700MB)
2026-02-27 12:22:02 (409329): Setting CPU Count for VM. (7)
2026-02-27 12:22:02 (409329): Setting Chipset Options for VM.
2026-02-27 12:22:02 (409329): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-02-27 12:22:02 (409329): Setting Boot Options for VM.
2026-02-27 12:22:02 (409329): Setting Network Configuration for NAT. (Driver: virtio)
2026-02-27 12:22:02 (409329): Enabling VM Network Access.
2026-02-27 12:22:02 (409329): Disabling USB Support for VM.
2026-02-27 12:22:02 (409329): Disabling COM Port Support for VM.
2026-02-27 12:22:02 (409329): Disabling LPT Port Support for VM.
2026-02-27 12:22:02 (409329): Disabling Audio Support for VM.
2026-02-27 12:22:02 (409329): Disabling Clipboard Support for VM.
2026-02-27 12:22:02 (409329): Disabling Drag and Drop Support for VM.
2026-02-27 12:22:02 (409329): Adding storage controller(s) to VM.
2026-02-27 12:22:02 (409329): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-02-27 12:22:02 (409329): Adding VirtualBox Guest Additions to VM.
2026-02-27 12:22:02 (409329): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-02-27 12:22:02 (409329): forwarding host port 34413 to guest port 80
2026-02-27 12:22:02 (409329): Enabling remote desktop for VM.
2026-02-27 12:22:02 (409329): Required extension pack not installed, remote desktop not enabled.
2026-02-27 12:22:02 (409329): Enabling shared directory for VM.
2026-02-27 12:22:03 (409329): Starting VM using VBoxManage interface. (boinc_75f40ec2d56045a3, slot#5)
2026-02-27 12:22:04 (409329): Successfully started VM. (PID = '409815')
2026-02-27 12:22:04 (409329): Reporting VM Process ID to BOINC.
2026-02-27 12:22:04 (409329): Guest Log: BIOS: VirtualBox 7.2.4
2026-02-27 12:22:04 (409329): Guest Log: CPUID EDX: 0x178bfbff
2026-02-27 12:22:04 (409329): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-02-27 12:22:04 (409329): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-02-27 12:22:04 (409329): VM state change detected. (old = 'poweredoff', new = 'running')
2026-02-27 12:22:04 (409329): Detected: Web Application Enabled (http://localhost:34413)
2026-02-27 12:22:04 (409329): Preference change detected
2026-02-27 12:22:04 (409329): Setting CPU throttle for VM. (100%)
2026-02-27 12:22:04 (409329): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-02-27 12:22:06 (409329): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-02-27 12:22:06 (409329): Guest Log: BIOS: Booting from Hard Disk...
2026-02-27 12:22:08 (409329): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-02-27 12:22:08 (409329): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-02-27 12:22:08 (409329): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-02-27 12:22:08 (409329): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-02-27 12:22:08 (409329): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-02-27 12:22:08 (409329): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-02-27 12:22:08 (409329): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-02-27 12:22:08 (409329): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-02-27 12:22:08 (409329): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-02-27 12:22:08 (409329): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-02-27 12:22:08 (409329): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-02-27 12:22:08 (409329): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-02-27 12:22:08 (409329): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-02-27 12:22:08 (409329): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-02-27 12:22:08 (409329): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-02-27 12:22:08 (409329): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-02-27 12:22:08 (409329): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-02-27 12:22:08 (409329): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-02-27 12:22:08 (409329): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-02-27 12:22:08 (409329): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-02-27 12:22:08 (409329): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-02-27 12:22:08 (409329): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-02-27 12:22:08 (409329): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-02-27 12:22:08 (409329): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-02-27 12:22:08 (409329): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-02-27 12:22:08 (409329): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-02-27 12:22:08 (409329): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-02-27 12:22:08 (409329): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-02-27 12:22:08 (409329): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-02-27 12:22:08 (409329): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-02-27 12:22:08 (409329): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-02-27 12:22:08 (409329): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-02-27 12:22:13 (409329): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-02-27 12:22:13 (409329): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-02-27 12:22:16 (409329): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-02-27 12:22:16 (409329): Guest Log: 00:00:00.000127 main     Log opened 2026-02-27T10:22:14.161573000Z
2026-02-27 12:22:16 (409329): Guest Log: 00:00:00.000207 main     OS Product: Linux
2026-02-27 12:22:16 (409329): Guest Log: 00:00:00.000231 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-02-27 12:22:16 (409329): Guest Log: 00:00:00.000244 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-02-27 12:22:16 (409329): Guest Log: 00:00:00.000257 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-02-27 12:22:16 (409329): Guest Log: 00:00:00.000258 main     Process ID: 1355
2026-02-27 12:22:16 (409329): Guest Log: 00:00:00.000258 main     Package type: LINUX_64BITS_GENERIC
2026-02-27 12:22:16 (409329): Guest Log: 00:00:00.000862 main     5.2.32 r132073 started. Verbose level = 0
2026-02-27 12:22:16 (409329): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-02-27 12:22:16 (409329): Guest Log: [INFO] Mounting shared directory
2026-02-27 12:22:16 (409329): Guest Log: [INFO] Checking for init_data.xml
2026-02-27 12:22:22 (409329): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-02-27 12:22:22 (409329): Guest Log: [INFO] Detected branch: prod
2026-02-27 12:22:22 (409329): Guest Log: This is the prod version of the ATLAS job wrapper
2026-02-27 12:22:22 (409329): Guest Log: Copying input files
2026-02-27 12:22:23 (409329): Guest Log: Copied input files into RunAtlas.
2026-02-27 12:22:23 (409329): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-02-27 12:22:23 (409329): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-02-27 12:22:23 (409329): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-02-27 12:22:23 (409329): Guest Log: Further information can be found at the LHC@home message board.
2026-02-27 12:22:31 (409329): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-02-27 12:22:31 (409329): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-02-27 12:22:31 (409329): Guest Log: 2.6.3.0 1632 0 32196 156691 4 1 3117743 4096001 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2026-02-27 12:22:31 (409329): Guest Log: copied the webapp to /var/www
2026-02-27 12:22:31 (409329): Guest Log: ATHENA_PROC_NUMBER=7
2026-02-27 12:22:31 (409329): Guest Log: ATHENA_CORE_NUMBER=7
2026-02-27 12:22:31 (409329): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-02-27 12:22:31 (409329): Guest Log:  *** Starting ATLAS job. (PandaID=7031188995 taskID=48842503) ***
2026-02-27 12:36:15 (409329): VM state change detected. (old = 'running', new = 'paused')
2026-02-27 13:27:22 (409329): VM state change detected. (old = 'paused', new = 'running')
2026-02-27 13:27:24 (409329): Guest Log: 00:14:01.338821 timesync vgsvcTimeSyncWorker: Radical host time change: 3 076 875 000 000ns (HostNow=1 772 191 601 809 000 000 ns HostLast=1 772 188 524 934 000 000 ns)
2026-02-27 13:27:34 (409329): Guest Log: 00:14:11.339706 timesync vgsvcTimeSyncWorker: Radical guest time change: 3 036 309 841 000ns (GuestNow=1 772 191 611 809 984 000 ns GuestLast=1 772 188 575 500 143 000 ns fSetTimeLastLoop=true )
2026-02-27 14:00:25 (409329): Guest Log:  *** Job finished ***
2026-02-27 14:00:25 (409329): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-02-27 14:00:25 (409329): Guest Log: 2026-02-27 11:59:03,545 | INFO     | [job] job monitor thread has finished
2026-02-27 14:00:25 (409329): Guest Log: 2026-02-27 11:59:04,831 | INFO     | [data] queue_monitor thread has finished
2026-02-27 14:00:25 (409329): Guest Log: 2026-02-27 11:59:37,310 | INFO     | [monitor] cgroup control has ended
2026-02-27 14:00:25 (409329): Guest Log: 2026-02-27 11:59:37,629 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139765800232768)>', '<ExcThread(monitor, started 139765122844416)>']
2026-02-27 14:00:25 (409329): Guest Log: 2026-02-27 11:59:38,085 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-02-27 14:00:25 (409329): Guest Log: 2026-02-27 11:59:38,085 | INFO     | [monitor] control thread has ended
2026-02-27 14:00:25 (409329): Guest Log: 2026-02-27 11:59:42,634 | INFO     | all workflow threads have been joined
2026-02-27 14:00:25 (409329): Guest Log: 2026-02-27 11:59:42,634 | INFO     | end of generic workflow (traces error code: 0)
2026-02-27 14:00:25 (409329): Guest Log: 2026-02-27 11:59:42,634 | INFO     | traces error code: 0
2026-02-27 14:00:25 (409329): Guest Log: 2026-02-27 11:59:42,634 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-02-27 14:00:25 (409329): Guest Log: 2026-02-27 11:59:42,685 [wrapper] ==== pilot stdout END ====
2026-02-27 14:00:25 (409329): Guest Log: 2026-02-27 11:59:42,689 [wrapper] ==== wrapper stdout RESUME ====
2026-02-27 14:00:25 (409329): Guest Log: 2026-02-27 11:59:42,693 [wrapper] pilotpid: 6044
2026-02-27 14:00:25 (409329): Guest Log: 2026-02-27 11:59:42,697 [wrapper] Pilot exit status: 0
2026-02-27 14:00:25 (409329): Guest Log: 2026-02-27 11:59:42,735 [wrapper] pandaids: 7031188995
2026-02-27 14:00:25 (409329): Guest Log: 2026-02-27 11:59:42,757 [wrapper] cleanup supervisor_pilot 15705 6045
2026-02-27 14:00:25 (409329): Guest Log: 2026-02-27 11:59:42,760 [wrapper] Test setup, not cleaning
2026-02-27 14:00:25 (409329): Guest Log: 2026-02-27 11:59:42,764 [wrapper] apfmon messages muted
2026-02-27 14:00:25 (409329): Guest Log: 2026-02-27 11:59:42,767 [wrapper] ==== wrapper stdout END ====
2026-02-27 14:00:25 (409329): Guest Log: 2026-02-27 11:59:42,769 [wrapper] ==== wrapper stderr END ====
2026-02-27 14:00:25 (409329): Guest Log:  *** Error codes and diagnostics ***
2026-02-27 14:00:25 (409329): Guest Log:     "exeErrorCode": 0,
2026-02-27 14:00:25 (409329): Guest Log:     "exeErrorDiag": "",
2026-02-27 14:00:25 (409329): Guest Log:     "pilotErrorCode": 0,
2026-02-27 14:00:25 (409329): Guest Log:     "pilotErrorDiag": "",
2026-02-27 14:00:25 (409329): Guest Log:  *** Listing of results directory ***
2026-02-27 14:00:25 (409329): Guest Log: total 175700
2026-02-27 14:00:25 (409329): Guest Log: -rw-r--r--. 1 atlas atlas    584627 Feb 27 04:02 pilot3.tar.gz
2026-02-27 14:00:25 (409329): Guest Log: -rwx------. 1 atlas atlas     36322 Feb 27 04:03 runpilot2-wrapper.sh
2026-02-27 14:00:25 (409329): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Feb 27 04:03 queuedata.json
2026-02-27 14:00:25 (409329): Guest Log: -rw-r--r--. 1 atlas atlas      9390 Feb 27 10:22 init_data.xml
2026-02-27 14:00:25 (409329): Guest Log: -rw-r--r--. 1 atlas atlas    597962 Feb 27 10:22 input.tar.gz
2026-02-27 14:00:25 (409329): Guest Log: -rw-r--r--. 1 atlas atlas     15845 Feb 27 10:22 start_atlas.sh
2026-02-27 14:00:25 (409329): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Feb 27 10:22 EVNT.48448385._000001.pool.root.1 -> /data/./ATLAS.root_0
2026-02-27 14:00:25 (409329): Guest Log: -rw-r--r--. 1 atlas atlas      2618 Feb 27 10:22 pandaJob.out
2026-02-27 14:00:25 (409329): Guest Log: -rw-------. 1 atlas atlas    998481 Feb 27 10:22 agis_schedconf.cvmfs.json
2026-02-27 14:00:25 (409329): Guest Log: -rw-------. 1 atlas atlas   1513015 Feb 27 10:22 agis_ddmendpoints.agis.ALL.json
2026-02-27 14:00:25 (409329): Guest Log: -rw-------. 1 atlas atlas       424 Feb 27 10:23 workernode_map.json
2026-02-27 14:00:25 (409329): Guest Log: drwx------. 5 atlas atlas      4096 Feb 27 10:23 pilot3
2026-02-27 14:00:25 (409329): Guest Log: -rw-------. 1 atlas atlas 174656165 Feb 27 11:58 HITS.48842503._000015.pool.root.1
2026-02-27 14:00:25 (409329): Guest Log: -rw-------. 1 atlas atlas        97 Feb 27 11:58 pilot_heartbeat.json
2026-02-27 14:00:25 (409329): Guest Log: -rw-------. 1 atlas atlas      1028 Feb 27 11:58 memory_monitor_summary.json
2026-02-27 14:00:25 (409329): Guest Log: -rw-------. 1 atlas atlas    284920 Feb 27 11:58 log.48842503._000015.job.log.tgz.1
2026-02-27 14:00:25 (409329): Guest Log: -rw-------. 1 atlas atlas      6323 Feb 27 11:58 heartbeat.json
2026-02-27 14:00:25 (409329): Guest Log: -rw-------. 1 atlas atlas      5123 Feb 27 11:59 pilotlog.txt
2026-02-27 14:00:25 (409329): Guest Log: -rw-------. 1 atlas atlas    418509 Feb 27 11:59 log.48842503._000015.job.log.1
2026-02-27 14:00:25 (409329): Guest Log: -rw-------. 1 atlas atlas       357 Feb 27 11:59 output.list
2026-02-27 14:00:25 (409329): Guest Log: -rw-r--r--. 1 atlas atlas       620 Feb 27 11:59 runtime_log
2026-02-27 14:00:25 (409329): Guest Log: -rw-------. 1 atlas atlas    716800 Feb 27 11:59 result.tar.gz
2026-02-27 14:00:25 (409329): Guest Log: -rw-r--r--. 1 atlas atlas      8730 Feb 27 11:59 runtime_log.err
2026-02-27 14:00:25 (409329): Guest Log: -rw-------. 1 atlas atlas       646 Feb 27 11:59 cLTKDmcF4F9n9Rq4apOajLDm4fhM0noT9bVooX4SDmqT2KDmgTQy1m.diag
2026-02-27 14:00:25 (409329): Guest Log: Looking for outputfile HITS.48842503._000015.pool.root.1
2026-02-27 14:00:25 (409329): Guest Log: HITS file was successfully produced
2026-02-27 14:00:25 (409329): Guest Log: -rw-------. 1 atlas atlas 174656165 Feb 27 11:58 /home/atlas/RunAtlas/HITS.48842503._000015.pool.root.1
2026-02-27 14:00:25 (409329): Guest Log: Successfully finished the ATLAS job!
2026-02-27 14:00:25 (409329): Guest Log: Copying the results back to the shared directory!
2026-02-27 14:00:25 (409329): Guest Log:  *** Contents of shared directory: ***
2026-02-27 14:00:25 (409329): Guest Log: total 241000
2026-02-27 14:00:25 (409329): Guest Log: -rw-r--r--. 1 root root 245433092 Feb 27 10:22 ATLAS.root_0
2026-02-27 14:00:25 (409329): Guest Log: -rw-r--r--. 1 root root      9390 Feb 27 10:22 init_data.xml
2026-02-27 14:00:25 (409329): Guest Log: -rw-r--r--. 1 root root    597962 Feb 27 10:22 input.tar.gz
2026-02-27 14:00:25 (409329): Guest Log: -rw-r--r--. 1 root root    716800 Feb 27  2026 result.tar.gz
2026-02-27 14:00:25 (409329): Guest Log: -rw-r--r--. 1 root root     15845 Feb 27 10:22 start_atlas.sh
2026-02-27 14:00:25 (409329): Guest Log:  *** Success! Shutting down the machine. ***
2026-02-27 14:00:25 (409329): VM Completion File Detected.
2026-02-27 14:00:25 (409329): Powering off VM.
2026-02-27 14:00:26 (409329): Successfully stopped VM.
2026-02-27 14:00:26 (409329): Deregistering VM. (boinc_75f40ec2d56045a3, slot#5)
2026-02-27 14:00:26 (409329): Removing network bandwidth throttle group from VM.
2026-02-27 14:00:26 (409329): Removing VM from VirtualBox.
2026-02-27 14:00:31 (409329): called boinc_finish(0)

</stderr_txt>
]]>

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