Stderr output

<core_client_version>8.2.6</core_client_version>
<![CDATA[
<stderr_txt>
04:56:50 (2886655): wrapper (7.7.26015): starting
04:56:50 (2886655): wrapper: running run_atlas (--nthreads 4)
[2026-02-28 04:56:50] Arguments: --nthreads 4
[2026-02-28 04:56:50] Threads: 4
[2026-02-28 04:56:50] Checking for CVMFS
[2026-02-28 04:56:51] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-28 04:56:51] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-28 04:56:51] Running cvmfs_config stat atlas.cern.ch
[2026-02-28 04:56:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-28 04:56:51] 2.13.1.0 1864625 3617 94948 156718 3 82 7164132 10240000 1013 130560 0 2030092 99.984 151718 599 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.101.101:3128 1
[2026-02-28 04:56:51] CVMFS is ok
[2026-02-28 04:56:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-28 04:56:51] Checking for apptainer binary...
[2026-02-28 04:56:51] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-28 04:56:51] Running /usr/bin/apptainer --version
[2026-02-28 04:56:51] apptainer version 1.4.5
[2026-02-28 04:56:51] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-28 04:56:52] peachesvl
[2026-02-28 04:56:52] apptainer works
[2026-02-28 04:56:52] Set ATHENA_PROC_NUMBER=4
[2026-02-28 04:56:52] Set ATHENA_CORE_NUMBER=4
[2026-02-28 04:56:52] Starting ATLAS job with PandaID=7031090028
[2026-02-28 04:56:52] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc_data/boinc-01/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-28 07:47:44]  *** The last 200 lines of the pilot log: ***
[2026-02-28 07:47:44] 2026-02-28 06:46:57,299 | INFO     | log transfer has been attempted: DONE
[2026-02-28 07:47:44] 2026-02-28 06:46:57,299 | INFO     | job 7031090028 has finished - writing final server update
[2026-02-28 07:47:44] 2026-02-28 06:46:57,300 | INFO     | total number of processed events: 400 (read)
[2026-02-28 07:47:44] 2026-02-28 06:46:57,303 | INFO     | using path: /var/lib/boinc_data/boinc-01/slots/1/PanDA_Pilot-7031090028/memory_monitor_summary.json (trf name=prmon)
[2026-02-28 07:47:44] 2026-02-28 06:46:57,303 | INFO     | extracted standard info from prmon json
[2026-02-28 07:47:44] 2026-02-28 06:46:57,303 | INFO     | extracted standard memory fields from prmon json
[2026-02-28 07:47:44] 2026-02-28 06:46:57,303 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-28 07:47:44] 2026-02-28 06:46:57,303 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-28 07:47:44] 2026-02-28 06:46:57,303 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-28 07:47:44] 2026-02-28 06:46:57,305 | INFO     | fitting pss+swap vs Time
[2026-02-28 07:47:44] 2026-02-28 06:46:57,305 | INFO     | sum of square deviations: 1444149868.0
[2026-02-28 07:47:44] 2026-02-28 06:46:57,305 | INFO     | sum of deviations: 16058759777.000002
[2026-02-28 07:47:44] 2026-02-28 06:46:57,306 | INFO     | mean x: 1772256143.0
[2026-02-28 07:47:44] 2026-02-28 06:46:57,306 | INFO     | mean y: 2304776.2155688624
[2026-02-28 07:47:44] 2026-02-28 06:46:57,306 | INFO     | intersect: -19704954348.603718
[2026-02-28 07:47:44] 2026-02-28 06:46:57,306 | INFO     | chi2: 2.7139621723437584
[2026-02-28 07:47:44] 2026-02-28 06:46:57,306 | INFO     | sum of square deviations: 1318277740.5
[2026-02-28 07:47:44] 2026-02-28 06:46:57,307 | INFO     | sum of deviations: 25703156725.0
[2026-02-28 07:47:44] 2026-02-28 06:46:57,307 | INFO     | mean x: 1772255990.5
[2026-02-28 07:47:44] 2026-02-28 06:46:57,307 | INFO     | mean y: 2316158.24691358
[2026-02-28 07:47:44] 2026-02-28 06:46:57,308 | INFO     | intersect: -34552294058.68985
[2026-02-28 07:47:44] 2026-02-28 06:46:57,308 | INFO     | chi2: 1.9599098587847446
[2026-02-28 07:47:44] 2026-02-28 06:46:57,308 | INFO     | current chi2=1.9599098587847446 (change=27.784186575740648 %)
[2026-02-28 07:47:44] 2026-02-28 06:46:57,308 | INFO     | sum of square deviations: 1199940638.0
[2026-02-28 07:47:44] 2026-02-28 06:46:57,309 | INFO     | sum of deviations: 24779335454.0
[2026-02-28 07:47:44] 2026-02-28 06:46:57,309 | INFO     | mean x: 1772255838.0
[2026-02-28 07:47:44] 2026-02-28 06:46:57,309 | INFO     | mean y: 2314969.299363057
[2026-02-28 07:47:44] 2026-02-28 06:46:57,309 | INFO     | intersect: -36595597068.50586
[2026-02-28 07:47:44] 2026-02-28 06:46:57,310 | INFO     | chi2: 1.962365357196451
[2026-02-28 07:47:44] 2026-02-28 06:46:57,310 | INFO     | current chi2=1.962365357196451 (change=-0.1252862931782483 %)
[2026-02-28 07:47:44] 2026-02-28 06:46:57,310 | INFO     | right removable region: 156
[2026-02-28 07:47:44] 2026-02-28 06:46:57,310 | INFO     | sum of square deviations: 1318277740.5
[2026-02-28 07:47:44] 2026-02-28 06:46:57,311 | INFO     | sum of deviations: -15117925636.5
[2026-02-28 07:47:44] 2026-02-28 06:46:57,311 | INFO     | mean x: 1772256295.5
[2026-02-28 07:47:44] 2026-02-28 06:46:57,311 | INFO     | mean y: 2342231.611111111
[2026-02-28 07:47:44] 2026-02-28 06:46:57,311 | INFO     | intersect: 20326465184.65886
[2026-02-28 07:47:44] 2026-02-28 06:46:57,311 | INFO     | chi2: 0.8243535104239395
[2026-02-28 07:47:44] 2026-02-28 06:46:57,311 | INFO     | current chi2=0.8243535104239395 (change=69.62546056004776 %)
[2026-02-28 07:47:44] 2026-02-28 06:46:57,312 | INFO     | sum of square deviations: 1199940638.0
[2026-02-28 07:47:44] 2026-02-28 06:46:57,313 | INFO     | sum of deviations: -11453641027.0
[2026-02-28 07:47:44] 2026-02-28 06:46:57,313 | INFO     | mean x: 1772256448.0
[2026-02-28 07:47:44] 2026-02-28 06:46:57,313 | INFO     | mean y: 2337496.949044586
[2026-02-28 07:47:44] 2026-02-28 06:46:57,313 | INFO     | intersect: 16918831963.717901
[2026-02-28 07:47:44] 2026-02-28 06:46:57,313 | INFO     | chi2: 0.8114410578242366
[2026-02-28 07:47:44] 2026-02-28 06:46:57,313 | INFO     | current chi2=0.8114410578242366 (change=1.5663732168814795 %)
[2026-02-28 07:47:44] 2026-02-28 06:46:57,313 | INFO     | left removable region: 20
[2026-02-28 07:47:44] 2026-02-28 06:46:57,314 | INFO     | sum of square deviations: 779958810.0
[2026-02-28 07:47:44] 2026-02-28 06:46:57,314 | INFO     | sum of deviations: 1116753626.4999998
[2026-02-28 07:47:44] 2026-02-28 06:46:57,314 | INFO     | mean x: 1772256417.5
[2026-02-28 07:47:44] 2026-02-28 06:46:57,315 | INFO     | mean y: 2346291.5514705884
[2026-02-28 07:47:44] 2026-02-28 06:46:57,315 | INFO     | intersect: -2535189993.6416187
[2026-02-28 07:47:44] 2026-02-28 06:46:57,315 | INFO     | chi2: 0.00021662585922052445
[2026-02-28 07:47:44] 2026-02-28 06:46:57,315 | INFO     | current memory leak: 1.43 B/s (using 136 data points, chi2=0.00)
[2026-02-28 07:47:44] 2026-02-28 06:46:57,315 | INFO     | could have reported an average CPU frequency of 3700 MHz (9 samples)
[2026-02-28 07:47:44] 2026-02-28 06:46:57,316 | INFO     | ..............................
[2026-02-28 07:47:44] 2026-02-28 06:46:57,316 | INFO     | . Timing measurements:
[2026-02-28 07:47:44] 2026-02-28 06:46:57,316 | INFO     | . get job = 0 s
[2026-02-28 07:47:44] 2026-02-28 06:46:57,316 | INFO     | . initial setup = 12 s
[2026-02-28 07:47:44] 2026-02-28 06:46:57,316 | INFO     | . payload setup = 13 s
[2026-02-28 07:47:44] 2026-02-28 06:46:57,316 | INFO     | . stage-in = 0 s
[2026-02-28 07:47:44] 2026-02-28 06:46:57,316 | INFO     | . payload execution = 10138 s
[2026-02-28 07:47:44] 2026-02-28 06:46:57,316 | INFO     | . stage-out = 0 s
[2026-02-28 07:47:44] 2026-02-28 06:46:57,316 | INFO     | . log creation = 0 s
[2026-02-28 07:47:44] 2026-02-28 06:46:57,316 | INFO     | ..............................
[2026-02-28 07:47:44] 2026-02-28 06:46:57,356 | INFO     | 
[2026-02-28 07:47:44] 2026-02-28 06:46:57,356 | INFO     | job summary report
[2026-02-28 07:47:44] 2026-02-28 06:46:57,356 | INFO     | --------------------------------------------------
[2026-02-28 07:47:44] 2026-02-28 06:46:57,356 | INFO     | PanDA job id: 7031090028
[2026-02-28 07:47:44] 2026-02-28 06:46:57,356 | INFO     | task id: 48838432
[2026-02-28 07:47:44] 2026-02-28 06:46:57,357 | INFO     | errors: (none)
[2026-02-28 07:47:44] 2026-02-28 06:46:57,357 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-28 07:47:44] 2026-02-28 06:46:57,357 | INFO     | pilot state: finished 
[2026-02-28 07:47:44] 2026-02-28 06:46:57,357 | INFO     | transexitcode: 0
[2026-02-28 07:47:44] 2026-02-28 06:46:57,357 | INFO     | exeerrorcode: 0
[2026-02-28 07:47:44] 2026-02-28 06:46:57,357 | INFO     | exeerrordiag: 
[2026-02-28 07:47:44] 2026-02-28 06:46:57,357 | INFO     | exitcode: 0
[2026-02-28 07:47:44] 2026-02-28 06:46:57,357 | INFO     | exitmsg: OK
[2026-02-28 07:47:44] 2026-02-28 06:46:57,358 | INFO     | cpuconsumptiontime: 39312 s
[2026-02-28 07:47:44] 2026-02-28 06:46:57,358 | INFO     | nevents: 400
[2026-02-28 07:47:44] 2026-02-28 06:46:57,358 | INFO     | neventsw: 0
[2026-02-28 07:47:44] 2026-02-28 06:46:57,358 | INFO     | pid: 2895319
[2026-02-28 07:47:44] 2026-02-28 06:46:57,358 | INFO     | pgrp: 2895319
[2026-02-28 07:47:44] 2026-02-28 06:46:57,358 | INFO     | corecount: 4
[2026-02-28 07:47:44] 2026-02-28 06:46:57,358 | INFO     | event service: False
[2026-02-28 07:47:44] 2026-02-28 06:46:57,358 | INFO     | sizes: {0: 2281202, 1: 2282334, 11: 2282334, 10156: 2310867, 10158: 2319893, 10160: 2319949, 10162: 2320335}
[2026-02-28 07:47:44] 2026-02-28 06:46:57,358 | INFO     | --------------------------------------------------
[2026-02-28 07:47:44] 2026-02-28 06:46:57,359 | INFO     | 
[2026-02-28 07:47:44] 2026-02-28 06:46:57,359 | INFO     | executing command: ls -lF /var/lib/boinc_data/boinc-01/slots/1
[2026-02-28 07:47:44] 2026-02-28 06:46:57,401 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-28 07:47:44] 2026-02-28 06:46:57,402 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-28 07:47:44] 2026-02-28 06:46:57,402 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-28 07:47:44] 2026-02-28 06:46:57,402 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-28 07:47:44] 2026-02-28 06:46:57,402 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-28 07:47:44] 2026-02-28 06:46:57,402 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-28 07:47:44] 2026-02-28 06:46:57,402 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-28 07:47:44] 2026-02-28 06:46:57,403 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-28 07:47:44] 2026-02-28 06:46:57,403 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-28 07:47:44] 2026-02-28 06:46:57,403 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-28 07:47:44] 2026-02-28 06:46:57,403 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-28 07:47:44] 2026-02-28 06:46:57,403 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-28 07:47:44] 2026-02-28 06:46:57,403 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-28 07:47:44] 2026-02-28 06:46:57,403 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-28 07:47:44] 2026-02-28 06:46:57,404 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-28 07:47:44] 2026-02-28 06:46:57,404 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-28 07:47:44] 2026-02-28 06:46:57,404 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-28 07:47:44] 2026-02-28 06:46:57,404 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-28 07:47:44] 2026-02-28 06:46:57,404 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-28 07:47:44] 2026-02-28 06:46:57,404 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-28 07:47:44] 2026-02-28 06:46:57,405 | INFO     | job 7031090028 has completed (purged errors)
[2026-02-28 07:47:44] 2026-02-28 06:46:57,405 | INFO     | overall cleanup function is called
[2026-02-28 07:47:44] 2026-02-28 06:46:58,414 | INFO     | --- collectZombieJob: --- 10, [2895319]
[2026-02-28 07:47:44] 2026-02-28 06:46:58,415 | INFO     | zombie collector waiting for pid 2895319
[2026-02-28 07:47:44] 2026-02-28 06:46:58,415 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-28 07:47:44] 2026-02-28 06:46:58,415 | INFO     | collected zombie processes
[2026-02-28 07:47:44] 2026-02-28 06:46:58,415 | INFO     | will attempt to kill all subprocesses of pid=2895319
[2026-02-28 07:47:44] 2026-02-28 06:46:58,670 | INFO     | process IDs to be killed: [2895319] (in reverse order)
[2026-02-28 07:47:44] 2026-02-28 06:46:58,797 | WARNING  | found no corresponding commands to process id(s)
[2026-02-28 07:47:44] 2026-02-28 06:46:58,798 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-28 07:47:44] 2026-02-28 06:46:58,808 | INFO     | did not find any defunct processes belonging to 2895319
[2026-02-28 07:47:44] 2026-02-28 06:46:58,816 | INFO     | did not find any defunct processes belonging to 2895319
[2026-02-28 07:47:44] 2026-02-28 06:46:58,817 | INFO     | ready for new job
[2026-02-28 07:47:44] 2026-02-28 06:46:58,817 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-28 07:47:44] 2026-02-28 06:46:58,820 | INFO     | **************************************
[2026-02-28 07:47:44] 2026-02-28 06:46:58,820 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-28 07:47:44] 2026-02-28 06:46:58,820 | INFO     | **************************************
[2026-02-28 07:47:44] 2026-02-28 06:46:58,820 | INFO     | 
[2026-02-28 07:47:44] 2026-02-28 06:46:58,821 | INFO     | pilot is running in a VM
[2026-02-28 07:47:44] 2026-02-28 06:46:58,821 | INFO     | architecture information:
[2026-02-28 07:47:44] 2026-02-28 06:46:58,821 | INFO     | executing command: cat /etc/os-release
[2026-02-28 07:47:44] 2026-02-28 06:46:58,846 | INFO     | cat /etc/os-release:
[2026-02-28 07:47:44] NAME="CentOS Linux"
[2026-02-28 07:47:44] VERSION="7 (Core)"
[2026-02-28 07:47:44] ID="centos"
[2026-02-28 07:47:44] ID_LIKE="rhel fedora"
[2026-02-28 07:47:44] VERSION_ID="7"
[2026-02-28 07:47:44] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-28 07:47:44] ANSI_COLOR="0;31"
[2026-02-28 07:47:44] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-28 07:47:44] HOME_URL="https://www.centos.org/"
[2026-02-28 07:47:44] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-28 07:47:44] 
[2026-02-28 07:47:44] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-28 07:47:44] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-28 07:47:44] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-28 07:47:44] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-28 07:47:44] 
[2026-02-28 07:47:44] 2026-02-28 06:46:58,847 | INFO     | **************************************
[2026-02-28 07:47:44] 2026-02-28 06:46:59,351 | INFO     | executing command: df -mP /var/lib/boinc_data/boinc-01/slots/1
[2026-02-28 07:47:44] 2026-02-28 06:46:59,381 | INFO     | sufficient remaining disk space (58834550784 B)
[2026-02-28 07:47:44] 2026-02-28 06:46:59,382 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-28 07:47:44] 2026-02-28 06:46:59,383 | INFO     | current server update state: UPDATING_FINAL
[2026-02-28 07:47:44] 2026-02-28 06:46:59,383 | INFO     | update_server=False
[2026-02-28 07:47:44] 2026-02-28 06:46:59,384 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-28 07:47:44] 2026-02-28 06:46:59,384 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-28 07:47:44] 2026-02-28 06:46:59,385 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-28 07:47:44] 2026-02-28 06:46:59,385 | INFO     | aborting loop
[2026-02-28 07:47:44] 2026-02-28 06:46:59,739 | INFO     | all data control threads have been joined
[2026-02-28 07:47:44] 2026-02-28 06:46:59,943 | INFO     | all payload control threads have been joined
[2026-02-28 07:47:44] 2026-02-28 06:47:00,190 | INFO     | all job control threads have been joined
[2026-02-28 07:47:44] 2026-02-28 06:47:00,390 | INFO     | [job] retrieve thread has finished
[2026-02-28 07:47:44] 2026-02-28 06:47:00,391 | INFO     | [job] job monitor thread has finished
[2026-02-28 07:47:44] 2026-02-28 06:47:00,682 | INFO     | [payload] validate_post thread has finished
[2026-02-28 07:47:44] 2026-02-28 06:47:00,723 | INFO     | [job] validate thread has finished
[2026-02-28 07:47:44] 2026-02-28 06:47:00,745 | INFO     | [data] control thread has finished
[2026-02-28 07:47:44] 2026-02-28 06:47:00,948 | INFO     | [payload] control thread has finished
[2026-02-28 07:47:44] 2026-02-28 06:47:00,966 | INFO     | [job] create_data_payload thread has finished
[2026-02-28 07:47:44] 2026-02-28 06:47:01,003 | INFO     | [payload] validate_pre thread has finished
[2026-02-28 07:47:44] 2026-02-28 06:47:01,196 | INFO     | [job] control thread has finished
[2026-02-28 07:47:44] 2026-02-28 06:47:01,313 | INFO     | [payload] execute_payloads thread has finished
[2026-02-28 07:47:44] 2026-02-28 06:47:01,315 | INFO     | [data] copytool_in thread has finished
[2026-02-28 07:47:44] 2026-02-28 06:47:01,391 | INFO     | [data] copytool_out thread has finished
[2026-02-28 07:47:44] 2026-02-28 06:47:01,791 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-28 07:47:44] 2026-02-28 06:47:01,800 | INFO     | [payload] failed_post thread has finished
[2026-02-28 07:47:44] 2026-02-28 06:47:01,852 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-28 07:47:44] 2026-02-28 06:47:02,370 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-28 07:47:44] 2026-02-28 06:47:03,376 | INFO     | [job] queue monitor thread has finished
[2026-02-28 07:47:44] 2026-02-28 06:47:05,799 | INFO     | [data] queue_monitor thread has finished
[2026-02-28 07:47:44] 2026-02-28 06:47:29,004 | INFO     | PID=2890749 has CPU usage=5.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-28 07:47:44] 2026-02-28 06:47:29,004 | INFO     | .. there are 3 such processes running
[2026-02-28 07:47:44] 2026-02-28 06:47:29,005 | INFO     | found 0 job(s) in 20 queues
[2026-02-28 07:47:44] 2026-02-28 06:47:29,005 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-28 07:47:44] 2026-02-28 06:47:29,005 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-28 07:47:44] 2026-02-28 06:47:38,209 | INFO     | [monitor] cgroup control has ended
[2026-02-28 07:47:44] 2026-02-28 06:47:39,215 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 132449278207808)>', '<ExcThread(monitor, started 132448151115520)>']
[2026-02-28 07:47:44] 2026-02-28 06:47:40,060 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-28 07:47:44] 2026-02-28 06:47:40,060 | INFO     | [monitor] control thread has ended
[2026-02-28 07:47:44] 2026-02-28 06:47:44,241 | INFO     | all workflow threads have been joined
[2026-02-28 07:47:44] 2026-02-28 06:47:44,241 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-28 07:47:44] 2026-02-28 06:47:44,243 | INFO     | traces error code: 0
[2026-02-28 07:47:44] 2026-02-28 06:47:44,243 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-28 07:47:44] 2026-02-28 06:47:44,384 [wrapper] ==== pilot stdout END ====
[2026-02-28 07:47:44] 2026-02-28 06:47:44,392 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-28 07:47:44] 2026-02-28 06:47:44,401 [wrapper] pilotpid: 2890749
[2026-02-28 07:47:44] 2026-02-28 06:47:44,411 [wrapper] Pilot exit status: 0
[2026-02-28 07:47:44] 2026-02-28 06:47:44,443 [wrapper] pandaids: 7031090028
[2026-02-28 07:47:44] 2026-02-28 06:47:44,540 [wrapper] cleanup supervisor_pilot 2941319 2890750
[2026-02-28 07:47:44] 2026-02-28 06:47:44,550 [wrapper] Test setup, not cleaning
[2026-02-28 07:47:44] 2026-02-28 06:47:44,559 [wrapper] apfmon messages muted
[2026-02-28 07:47:44] 2026-02-28 06:47:44,569 [wrapper] ==== wrapper stdout END ====
[2026-02-28 07:47:44] 2026-02-28 06:47:44,578 [wrapper] ==== wrapper stderr END ====
[2026-02-28 07:47:44]  *** Error codes and diagnostics ***
[2026-02-28 07:47:44]     "exeErrorCode": 0,
[2026-02-28 07:47:44]     "exeErrorDiag": "",
[2026-02-28 07:47:44]     "pilotErrorCode": 0,
[2026-02-28 07:47:44]     "pilotErrorDiag": "",
[2026-02-28 07:47:44]  *** Listing of results directory ***
[2026-02-28 07:47:44] insgesamt 508512
[2026-02-28 07:47:44] -rw-r--r-- 1 yeti boinc      5111 Feb 27 01:16 queuedata.json
[2026-02-28 07:47:44] -rw-r--r-- 1 yeti boinc    584627 Feb 27 01:16 pilot3.tar.gz
[2026-02-28 07:47:44] -rwx------ 1 yeti boinc     36322 Feb 27 01:17 runpilot2-wrapper.sh
[2026-02-28 07:47:44] -rw-r--r-- 1 yeti boinc       100 Feb 28 04:56 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-28 07:47:44] -rwxr-xr-x 1 yeti boinc      7986 Feb 28 04:56 run_atlas
[2026-02-28 07:47:44] -rw-r--r-- 1 yeti boinc       105 Feb 28 04:56 job.xml
[2026-02-28 07:47:44] -rw-r--r-- 2 yeti boinc 290130393 Feb 28 04:56 EVNT.48220101._000109.pool.root.1
[2026-02-28 07:47:44] -rw-r--r-- 2 yeti boinc     15845 Feb 28 04:56 start_atlas.sh
[2026-02-28 07:47:44] drwxrwx--x 2 yeti boinc      4096 Feb 28 04:56 shared
[2026-02-28 07:47:44] -rw-r--r-- 2 yeti boinc    597971 Feb 28 04:56 input.tar.gz
[2026-02-28 07:47:44] -rw-r--r-- 1 yeti boinc      6559 Feb 28 04:56 init_data.xml
[2026-02-28 07:47:44] -rw-r--r-- 1 yeti boinc         0 Feb 28 04:56 boinc_setup_complete
[2026-02-28 07:47:44] -rw-r--r-- 1 yeti boinc         0 Feb 28 04:56 boinc_lockfile
[2026-02-28 07:47:44] -rw-r--r-- 1 yeti boinc      2580 Feb 28 04:56 pandaJob.out
[2026-02-28 07:47:44] -rw------- 1 yeti boinc        52 Feb 28 04:56 setup.sh.local
[2026-02-28 07:47:44] -rw------- 1 yeti boinc    998782 Feb 28 04:57 agis_schedconf.cvmfs.json
[2026-02-28 07:47:44] -rw------- 1 yeti boinc   1513015 Feb 28 04:57 agis_ddmendpoints.agis.ALL.json
[2026-02-28 07:47:44] -rw------- 1 yeti boinc       422 Feb 28 04:57 workernode_map.json
[2026-02-28 07:47:44] drwx------ 5 yeti boinc      4096 Feb 28 04:57 pilot3
[2026-02-28 07:47:44] -rw------- 1 yeti boinc 223082303 Feb 28 07:46 HITS.48838432._002807.pool.root.1
[2026-02-28 07:47:44] -rw-r--r-- 1 yeti boinc       530 Feb 28 07:46 boinc_task_state.xml
[2026-02-28 07:47:44] -rw------- 1 yeti boinc        95 Feb 28 07:46 pilot_heartbeat.json
[2026-02-28 07:47:44] -rw------- 1 yeti boinc      1014 Feb 28 07:46 memory_monitor_summary.json
[2026-02-28 07:47:44] -rw------- 1 yeti boinc    342816 Feb 28 07:46 log.48838432._002807.job.log.tgz.1
[2026-02-28 07:47:44] -rw------- 1 yeti boinc      6273 Feb 28 07:46 heartbeat.json
[2026-02-28 07:47:44] -rw-r--r-- 1 yeti boinc      8192 Feb 28 07:47 boinc_mmap_file
[2026-02-28 07:47:44] -rw-r--r-- 1 yeti boinc        28 Feb 28 07:47 wrapper_checkpoint.txt
[2026-02-28 07:47:44] -rw------- 1 yeti boinc      4895 Feb 28 07:47 pilotlog.txt
[2026-02-28 07:47:44] -rw------- 1 yeti boinc   1445082 Feb 28 07:47 log.48838432._002807.job.log.1
[2026-02-28 07:47:44] -rw------- 1 yeti boinc       357 Feb 28 07:47 output.list
[2026-02-28 07:47:44] -rw-r--r-- 1 yeti boinc       620 Feb 28 07:47 runtime_log
[2026-02-28 07:47:44] -rw------- 1 yeti boinc   1802240 Feb 28 07:47 result.tar.gz
[2026-02-28 07:47:44] -rw-r--r-- 1 yeti boinc      9547 Feb 28 07:47 runtime_log.err
[2026-02-28 07:47:44] -rw------- 1 yeti boinc       642 Feb 28 07:47 bPYLDmdi0F9n9Rq4apOajLDm4fhM0noT9bVooX4SDmcA2KDmskshPm.diag
[2026-02-28 07:47:44] -rw-r--r-- 1 yeti boinc     20744 Feb 28 07:47 stderr.txt
[2026-02-28 07:47:44] HITS file was successfully produced:
[2026-02-28 07:47:44] -rw------- 1 yeti boinc 223082303 Feb 28 07:46 shared/HITS.pool.root.1
[2026-02-28 07:47:44]  *** Contents of shared directory: ***
[2026-02-28 07:47:44] insgesamt 503556
[2026-02-28 07:47:44] -rw-r--r-- 2 yeti boinc 290130393 Feb 28 04:56 ATLAS.root_0
[2026-02-28 07:47:44] -rw-r--r-- 2 yeti boinc     15845 Feb 28 04:56 start_atlas.sh
[2026-02-28 07:47:44] -rw-r--r-- 2 yeti boinc    597971 Feb 28 04:56 input.tar.gz
[2026-02-28 07:47:44] -rw------- 1 yeti boinc 223082303 Feb 28 07:46 HITS.pool.root.1
[2026-02-28 07:47:44] -rw------- 1 yeti boinc   1802240 Feb 28 07:47 result.tar.gz
07:47:46 (2886655): run_atlas exited; CPU time 39914.290742
07:47:46 (2886655): called boinc_finish(0)

</stderr_txt>
]]>

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