Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
07:45:21 (1560669): wrapper (7.7.26015): starting
07:45:21 (1560669): wrapper: running run_atlas (--nthreads 4)
[2026-02-27 07:45:21] Arguments: --nthreads 4
[2026-02-27 07:45:21] Threads: 4
[2026-02-27 07:45:21] Checking for CVMFS
[2026-02-27 07:45:21] No cvmfs_config command found, will try listing directly
[2026-02-27 07:45:21] CVMFS is ok
[2026-02-27 07:45:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-27 07:45:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-27 07:45:21] Further information can be found at the LHC@home message board.
[2026-02-27 07:45:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-27 07:45:21] Checking for apptainer binary...
[2026-02-27 07:45:21] which: no apptainer in ((null))
[2026-02-27 07:45:21] apptainer is not installed, using version from CVMFS
[2026-02-27 07:45:21] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-27 07:45:22] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot44/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut11.grid.cesnet.cz
[2026-02-27 07:45:22] apptainer works
[2026-02-27 07:45:22] Set ATHENA_PROC_NUMBER=4
[2026-02-27 07:45:22] Set ATHENA_CORE_NUMBER=4
[2026-02-27 07:45:22] Starting ATLAS job with PandaID=7031090374
[2026-02-27 07:45:22] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot44/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-27 11:11:07]  *** The last 200 lines of the pilot log: ***
[2026-02-27 11:11:07] 2026-02-27 10:09:16,408 | INFO     | preparing for final server update for job 7031090374 in state='finished'
[2026-02-27 11:11:07] 2026-02-27 10:09:16,409 | INFO     | reading metadata from: /scratch/boinc/var/slot44/slots/0/PanDA_Pilot-7031090374/jobReport.json
[2026-02-27 11:11:07] 2026-02-27 10:09:16,412 | INFO     | added worker_node to metadata from /scratch/boinc/var/slot44/slots/0/workernode_map.json
[2026-02-27 11:11:07] 2026-02-27 10:09:16,412 | INFO     | this job has now completed (state=finished)
[2026-02-27 11:11:07] 2026-02-27 10:09:16,412 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-27 11:11:07] 2026-02-27 10:09:16,413 | INFO     | log transfer has been attempted: DONE
[2026-02-27 11:11:07] 2026-02-27 10:09:16,413 | INFO     | job 7031090374 has finished - writing final server update
[2026-02-27 11:11:07] 2026-02-27 10:09:16,413 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_1098232/.job.ad'
[2026-02-27 11:11:07] 2026-02-27 10:09:16,416 | INFO     | total number of processed events: 400 (read)
[2026-02-27 11:11:07] 2026-02-27 10:09:16,441 | INFO     | using path: /scratch/boinc/var/slot44/slots/0/PanDA_Pilot-7031090374/memory_monitor_summary.json (trf name=prmon)
[2026-02-27 11:11:07] 2026-02-27 10:09:16,442 | INFO     | extracted standard info from prmon json
[2026-02-27 11:11:07] 2026-02-27 10:09:16,442 | INFO     | extracted standard memory fields from prmon json
[2026-02-27 11:11:07] 2026-02-27 10:09:16,442 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-27 11:11:07] 2026-02-27 10:09:16,442 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-27 11:11:07] 2026-02-27 10:09:16,442 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-27 11:11:07] 2026-02-27 10:09:16,446 | INFO     | fitting pss+swap vs Time
[2026-02-27 11:11:07] 2026-02-27 10:09:16,447 | INFO     | sum of square deviations: 2480604650.0
[2026-02-27 11:11:07] 2026-02-27 10:09:16,448 | INFO     | sum of deviations: 29248894727.500004
[2026-02-27 11:11:07] 2026-02-27 10:09:16,448 | INFO     | mean x: 1772180843.5
[2026-02-27 11:11:07] 2026-02-27 10:09:16,448 | INFO     | mean y: 2331043.205
[2026-02-27 11:11:07] 2026-02-27 10:09:16,448 | INFO     | intersect: -20893514221.62737
[2026-02-27 11:11:07] 2026-02-27 10:09:16,449 | INFO     | chi2: 1.3464989290535394
[2026-02-27 11:11:07] 2026-02-27 10:09:16,449 | INFO     | sum of square deviations: 2299168690.0
[2026-02-27 11:11:07] 2026-02-27 10:09:16,450 | INFO     | sum of deviations: 28441080297.999996
[2026-02-27 11:11:07] 2026-02-27 10:09:16,450 | INFO     | mean x: 1772180691.0
[2026-02-27 11:11:07] 2026-02-27 10:09:16,451 | INFO     | mean y: 2330364.1128205126
[2026-02-27 11:11:07] 2026-02-27 10:09:16,451 | INFO     | intersect: -21919825045.587074
[2026-02-27 11:11:07] 2026-02-27 10:09:16,451 | INFO     | chi2: 1.3470832895879896
[2026-02-27 11:11:07] 2026-02-27 10:09:16,451 | INFO     | current chi2=1.3470832895879896 (change=-0.04339851461010535 %)
[2026-02-27 11:11:07] 2026-02-27 10:09:16,451 | INFO     | right removable region: 194
[2026-02-27 11:11:07] 2026-02-27 10:09:16,451 | INFO     | sum of square deviations: 2299168690.0
[2026-02-27 11:11:07] 2026-02-27 10:09:16,453 | INFO     | sum of deviations: 3100888640.0000014
[2026-02-27 11:11:07] 2026-02-27 10:09:16,453 | INFO     | mean x: 1772180996.0
[2026-02-27 11:11:07] 2026-02-27 10:09:16,453 | INFO     | mean y: 2352744.405128205
[2026-02-27 11:11:07] 2026-02-27 10:09:16,453 | INFO     | intersect: -2387787632.167366
[2026-02-27 11:11:07] 2026-02-27 10:09:16,453 | INFO     | chi2: 0.0030817134010642316
[2026-02-27 11:11:07] 2026-02-27 10:09:16,453 | INFO     | current chi2=0.0030817134010642316 (change=99.77113138862795 %)
[2026-02-27 11:11:07] 2026-02-27 10:09:16,454 | INFO     | sum of square deviations: 2126802667.5
[2026-02-27 11:11:07] 2026-02-27 10:09:16,455 | INFO     | sum of deviations: 2890686483.0000005
[2026-02-27 11:11:07] 2026-02-27 10:09:16,455 | INFO     | mean x: 1772181148.5
[2026-02-27 11:11:07] 2026-02-27 10:09:16,455 | INFO     | mean y: 2352926.147368421
[2026-02-27 11:11:07] 2026-02-27 10:09:16,455 | INFO     | intersect: -2406342609.9637017
[2026-02-27 11:11:07] 2026-02-27 10:09:16,456 | INFO     | chi2: 0.0029658323280321317
[2026-02-27 11:11:07] 2026-02-27 10:09:16,456 | INFO     | current chi2=0.0029658323280321317 (change=3.7602806604949626 %)
[2026-02-27 11:11:07] 2026-02-27 10:09:16,456 | INFO     | left removable region: 20
[2026-02-27 11:11:07] 2026-02-27 10:09:16,456 | INFO     | sum of square deviations: 1633472487.5
[2026-02-27 11:11:07] 2026-02-27 10:09:16,457 | INFO     | sum of deviations: 3752644360.0
[2026-02-27 11:11:07] 2026-02-27 10:09:16,457 | INFO     | mean x: 1772181270.5
[2026-02-27 11:11:07] 2026-02-27 10:09:16,457 | INFO     | mean y: 2351732.2988505745
[2026-02-27 11:11:07] 2026-02-27 10:09:16,458 | INFO     | intersect: -4068954090.43816
[2026-02-27 11:11:07] 2026-02-27 10:09:16,458 | INFO     | chi2: 0.0009331765695969173
[2026-02-27 11:11:07] 2026-02-27 10:09:16,458 | INFO     | current memory leak: 2.30 B/s (using 174 data points, chi2=0.00)
[2026-02-27 11:11:07] 2026-02-27 10:09:16,458 | INFO     | could have reported an average CPU frequency of 2753 MHz (10 samples)
[2026-02-27 11:11:07] 2026-02-27 10:09:16,459 | INFO     | ..............................
[2026-02-27 11:11:07] 2026-02-27 10:09:16,459 | INFO     | . Timing measurements:
[2026-02-27 11:11:07] 2026-02-27 10:09:16,459 | INFO     | . get job = 0 s
[2026-02-27 11:11:07] 2026-02-27 10:09:16,459 | INFO     | . initial setup = 8 s
[2026-02-27 11:11:07] 2026-02-27 10:09:16,459 | INFO     | . payload setup = 9 s
[2026-02-27 11:11:07] 2026-02-27 10:09:16,459 | INFO     | . stage-in = 0 s
[2026-02-27 11:11:07] 2026-02-27 10:09:16,459 | INFO     | . payload execution = 12181 s
[2026-02-27 11:11:07] 2026-02-27 10:09:16,459 | INFO     | . stage-out = 1 s
[2026-02-27 11:11:07] 2026-02-27 10:09:16,459 | INFO     | . log creation = 0 s
[2026-02-27 11:11:07] 2026-02-27 10:09:16,459 | INFO     | ..............................
[2026-02-27 11:11:07] 2026-02-27 10:09:16,558 | INFO     | 
[2026-02-27 11:11:07] 2026-02-27 10:09:16,558 | INFO     | job summary report
[2026-02-27 11:11:07] 2026-02-27 10:09:16,559 | INFO     | --------------------------------------------------
[2026-02-27 11:11:07] 2026-02-27 10:09:16,559 | INFO     | PanDA job id: 7031090374
[2026-02-27 11:11:07] 2026-02-27 10:09:16,559 | INFO     | task id: 48838432
[2026-02-27 11:11:07] 2026-02-27 10:09:16,559 | INFO     | errors: (none)
[2026-02-27 11:11:07] 2026-02-27 10:09:16,559 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-27 11:11:07] 2026-02-27 10:09:16,559 | INFO     | pilot state: finished 
[2026-02-27 11:11:07] 2026-02-27 10:09:16,559 | INFO     | transexitcode: 0
[2026-02-27 11:11:07] 2026-02-27 10:09:16,559 | INFO     | exeerrorcode: 0
[2026-02-27 11:11:07] 2026-02-27 10:09:16,559 | INFO     | exeerrordiag: 
[2026-02-27 11:11:07] 2026-02-27 10:09:16,559 | INFO     | exitcode: 0
[2026-02-27 11:11:07] 2026-02-27 10:09:16,559 | INFO     | exitmsg: OK
[2026-02-27 11:11:07] 2026-02-27 10:09:16,559 | INFO     | cpuconsumptiontime: 47078 s
[2026-02-27 11:11:07] 2026-02-27 10:09:16,559 | INFO     | nevents: 400
[2026-02-27 11:11:07] 2026-02-27 10:09:16,560 | INFO     | neventsw: 0
[2026-02-27 11:11:07] 2026-02-27 10:09:16,560 | INFO     | pid: 1597703
[2026-02-27 11:11:07] 2026-02-27 10:09:16,560 | INFO     | pgrp: 1597703
[2026-02-27 11:11:07] 2026-02-27 10:09:16,560 | INFO     | corecount: 4
[2026-02-27 11:11:07] 2026-02-27 10:09:16,560 | INFO     | event service: False
[2026-02-27 11:11:07] 2026-02-27 10:09:16,560 | INFO     | sizes: {0: 2281870, 1: 2282331, 11: 2282331, 12195: 2312448, 12196: 2312447, 12197: 2321523, 12198: 2321707, 12200: 2321901}
[2026-02-27 11:11:07] 2026-02-27 10:09:16,560 | INFO     | --------------------------------------------------
[2026-02-27 11:11:07] 2026-02-27 10:09:16,560 | INFO     | 
[2026-02-27 11:11:07] 2026-02-27 10:09:16,560 | INFO     | executing command: ls -lF /scratch/boinc/var/slot44/slots/0
[2026-02-27 11:11:07] 2026-02-27 10:09:16,594 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-27 11:11:07] 2026-02-27 10:09:16,595 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-27 11:11:07] 2026-02-27 10:09:16,595 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-27 11:11:07] 2026-02-27 10:09:16,595 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-27 11:11:07] 2026-02-27 10:09:16,595 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-27 11:11:07] 2026-02-27 10:09:16,595 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-27 11:11:07] 2026-02-27 10:09:16,595 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-27 11:11:07] 2026-02-27 10:09:16,595 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-27 11:11:07] 2026-02-27 10:09:16,595 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-27 11:11:07] 2026-02-27 10:09:16,596 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-27 11:11:07] 2026-02-27 10:09:16,596 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-27 11:11:07] 2026-02-27 10:09:16,596 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-27 11:11:07] 2026-02-27 10:09:16,596 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-27 11:11:07] 2026-02-27 10:09:16,596 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-27 11:11:07] 2026-02-27 10:09:16,596 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-27 11:11:07] 2026-02-27 10:09:16,596 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-27 11:11:07] 2026-02-27 10:09:16,596 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-27 11:11:07] 2026-02-27 10:09:16,596 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-27 11:11:07] 2026-02-27 10:09:16,597 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-27 11:11:07] 2026-02-27 10:09:16,597 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-27 11:11:07] 2026-02-27 10:09:16,597 | INFO     | job 7031090374 has completed (purged errors)
[2026-02-27 11:11:07] 2026-02-27 10:09:16,597 | INFO     | overall cleanup function is called
[2026-02-27 11:11:07] 2026-02-27 10:09:17,607 | INFO     | --- collectZombieJob: --- 10, [1597703]
[2026-02-27 11:11:07] 2026-02-27 10:09:17,607 | INFO     | zombie collector waiting for pid 1597703
[2026-02-27 11:11:07] 2026-02-27 10:09:17,607 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-27 11:11:07] 2026-02-27 10:09:17,608 | INFO     | collected zombie processes
[2026-02-27 11:11:07] 2026-02-27 10:09:17,608 | INFO     | will attempt to kill all subprocesses of pid=1597703
[2026-02-27 11:11:07] 2026-02-27 10:09:18,407 | INFO     | process IDs to be killed: [1597703] (in reverse order)
[2026-02-27 11:11:07] 2026-02-27 10:09:18,725 | WARNING  | found no corresponding commands to process id(s)
[2026-02-27 11:11:07] 2026-02-27 10:09:18,725 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-27 11:11:07] 2026-02-27 10:09:18,753 | INFO     | did not find any defunct processes belonging to 1597703
[2026-02-27 11:11:07] 2026-02-27 10:09:18,777 | INFO     | did not find any defunct processes belonging to 1597703
[2026-02-27 11:11:07] 2026-02-27 10:09:18,777 | INFO     | ready for new job
[2026-02-27 11:11:07] 2026-02-27 10:09:18,777 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-27 11:11:07] 2026-02-27 10:09:18,780 | INFO     | **************************************
[2026-02-27 11:11:07] 2026-02-27 10:09:18,780 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-27 11:11:07] 2026-02-27 10:09:18,780 | INFO     | **************************************
[2026-02-27 11:11:07] 2026-02-27 10:09:18,780 | INFO     | 
[2026-02-27 11:11:07] 2026-02-27 10:09:18,788 | INFO     | architecture information:
[2026-02-27 11:11:07] 2026-02-27 10:09:18,788 | INFO     | executing command: cat /etc/os-release
[2026-02-27 11:11:07] 2026-02-27 10:09:18,814 | INFO     | cat /etc/os-release:
[2026-02-27 11:11:07] NAME="CentOS Linux"
[2026-02-27 11:11:07] VERSION="7 (Core)"
[2026-02-27 11:11:07] ID="centos"
[2026-02-27 11:11:07] ID_LIKE="rhel fedora"
[2026-02-27 11:11:07] VERSION_ID="7"
[2026-02-27 11:11:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-27 11:11:07] ANSI_COLOR="0;31"
[2026-02-27 11:11:07] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-27 11:11:07] HOME_URL="https://www.centos.org/"
[2026-02-27 11:11:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-27 11:11:07] 
[2026-02-27 11:11:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-27 11:11:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-27 11:11:07] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-27 11:11:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-27 11:11:07] 
[2026-02-27 11:11:07] 2026-02-27 10:09:18,815 | INFO     | **************************************
[2026-02-27 11:11:07] 2026-02-27 10:09:19,318 | INFO     | executing command: df -mP /scratch/boinc/var/slot44/slots/0
[2026-02-27 11:11:07] 2026-02-27 10:09:19,344 | INFO     | sufficient remaining disk space (3317124038656 B)
[2026-02-27 11:11:07] 2026-02-27 10:09:19,344 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-27 11:11:07] 2026-02-27 10:09:19,345 | INFO     | current server update state: UPDATING_FINAL
[2026-02-27 11:11:07] 2026-02-27 10:09:19,345 | INFO     | update_server=False
[2026-02-27 11:11:07] 2026-02-27 10:09:19,345 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-27 11:11:07] 2026-02-27 10:09:19,345 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-27 11:11:07] 2026-02-27 10:09:19,822 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-27 11:11:07] 2026-02-27 10:09:19,822 | INFO     | aborting loop
[2026-02-27 11:11:07] 2026-02-27 10:09:19,832 | INFO     | all job control threads have been joined
[2026-02-27 11:11:07] 2026-02-27 10:09:19,856 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-27 11:11:07] 2026-02-27 10:09:20,235 | INFO     | all payload control threads have been joined
[2026-02-27 11:11:07] 2026-02-27 10:09:20,329 | INFO     | all data control threads have been joined
[2026-02-27 11:11:07] 2026-02-27 10:09:20,350 | INFO     | [job] retrieve thread has finished
[2026-02-27 11:11:07] 2026-02-27 10:09:20,524 | INFO     | [data] copytool_in thread has finished
[2026-02-27 11:11:07] 2026-02-27 10:09:20,828 | INFO     | [job] job monitor thread has finished
[2026-02-27 11:11:07] 2026-02-27 10:09:20,837 | INFO     | [job] control thread has finished
[2026-02-27 11:11:07] 2026-02-27 10:09:20,889 | INFO     | [payload] validate_post thread has finished
[2026-02-27 11:11:07] 2026-02-27 10:09:21,098 | INFO     | [payload] validate_pre thread has finished
[2026-02-27 11:11:07] 2026-02-27 10:09:21,240 | INFO     | [payload] control thread has finished
[2026-02-27 11:11:07] 2026-02-27 10:09:21,334 | INFO     | [data] control thread has finished
[2026-02-27 11:11:07] 2026-02-27 10:09:21,351 | INFO     | [data] copytool_out thread has finished
[2026-02-27 11:11:07] 2026-02-27 10:09:21,570 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-27 11:11:07] 2026-02-27 10:09:21,601 | INFO     | [job] validate thread has finished
[2026-02-27 11:11:07] 2026-02-27 10:09:21,621 | INFO     | [payload] failed_post thread has finished
[2026-02-27 11:11:07] 2026-02-27 10:09:21,742 | INFO     | [job] create_data_payload thread has finished
[2026-02-27 11:11:07] 2026-02-27 10:09:21,797 | INFO     | [payload] execute_payloads thread has finished
[2026-02-27 11:11:07] 2026-02-27 10:09:22,575 | INFO     | [job] queue monitor thread has finished
[2026-02-27 11:11:07] 2026-02-27 10:09:23,862 | INFO     | [data] queue_monitor thread has finished
[2026-02-27 11:11:07] 2026-02-27 10:09:30,291 | INFO     | job.realtimelogging is not enabled
[2026-02-27 11:11:07] 2026-02-27 10:09:31,297 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-27 11:11:07] 2026-02-27 10:09:48,165 | INFO     | 12221s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2026-02-27 11:11:07] 2026-02-27 10:09:50,071 | INFO     | PID=1574497 has CPU usage=10.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-02-27 11:11:07] 2026-02-27 10:09:50,071 | INFO     | .. there are 19 such processes running
[2026-02-27 11:11:07] 2026-02-27 10:09:50,071 | INFO     | found 0 job(s) in 20 queues
[2026-02-27 11:11:07] 2026-02-27 10:09:50,072 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-27 11:11:07] 2026-02-27 10:09:50,072 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-27 11:11:07] 2026-02-27 10:10:05,243 | INFO     | [monitor] cgroup control has ended
[2026-02-27 11:11:07] 2026-02-27 10:10:06,233 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23271392581440)>', '<ExcThread(monitor, started 23271153346304)>']
[2026-02-27 11:11:07] 2026-02-27 10:10:07,157 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-27 11:11:07] 2026-02-27 10:10:07,157 | INFO     | [monitor] control thread has ended
[2026-02-27 11:11:07] 2026-02-27 10:10:11,258 | INFO     | all workflow threads have been joined
[2026-02-27 11:11:07] 2026-02-27 10:10:11,258 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-27 11:11:07] 2026-02-27 10:10:11,259 | INFO     | traces error code: 0
[2026-02-27 11:11:07] 2026-02-27 10:10:11,259 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-27 11:11:07] 2026-02-27 10:10:11,437 [wrapper] ==== pilot stdout END ====
[2026-02-27 11:11:07] 2026-02-27 10:10:11,441 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-27 11:11:07] 2026-02-27 10:10:11,445 [wrapper] pilotpid: 1574497
[2026-02-27 11:11:07] 2026-02-27 10:10:11,449 [wrapper] Pilot exit status: 0
[2026-02-27 11:11:07] 2026-02-27 10:10:11,464 [wrapper] pandaids: 7031090374
[2026-02-27 11:11:07] 2026-02-27 10:10:11,666 [wrapper] cleanup supervisor_pilot 1916679 1574498
[2026-02-27 11:11:07] 2026-02-27 10:10:11,671 [wrapper] Test setup, not cleaning
[2026-02-27 11:11:07] 2026-02-27 10:10:11,675 [wrapper] apfmon messages muted
[2026-02-27 11:11:07] 2026-02-27 10:10:11,680 [wrapper] ==== wrapper stdout END ====
[2026-02-27 11:11:07] 2026-02-27 10:10:11,684 [wrapper] ==== wrapper stderr END ====
[2026-02-27 11:11:07]  *** Error codes and diagnostics ***
[2026-02-27 11:11:07]     "exeErrorCode": 0,
[2026-02-27 11:11:07]     "exeErrorDiag": "",
[2026-02-27 11:11:07]     "pilotErrorCode": 0,
[2026-02-27 11:11:07]     "pilotErrorDiag": "",
[2026-02-27 11:11:07]  *** Listing of results directory ***
[2026-02-27 11:11:07] total 504716
[2026-02-27 11:11:07] -rw-r--r-- 1 boinc boinc      5111 Feb 27 01:16 queuedata.json
[2026-02-27 11:11:07] -rw-r--r-- 1 boinc boinc    584627 Feb 27 01:16 pilot3.tar.gz
[2026-02-27 11:11:07] -rwx------ 1 boinc boinc     36322 Feb 27 01:17 runpilot2-wrapper.sh
[2026-02-27 11:11:07] -rw-r--r-- 1 boinc boinc       100 Feb 27 07:45 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-27 11:11:07] -rwxr-xr-x 1 boinc boinc      7986 Feb 27 07:45 run_atlas
[2026-02-27 11:11:07] -rw-r--r-- 1 boinc boinc       105 Feb 27 07:45 job.xml
[2026-02-27 11:11:07] -rw-r--r-- 2 boinc boinc 284963638 Feb 27 07:45 EVNT.48220101._000121.pool.root.1
[2026-02-27 11:11:07] -rw-r--r-- 1 boinc boinc      6695 Feb 27 07:45 init_data.xml
[2026-02-27 11:11:07] -rw-r--r-- 2 boinc boinc     15845 Feb 27 07:45 start_atlas.sh
[2026-02-27 11:11:07] drwxrwx--x 2 boinc boinc      4096 Feb 27 07:45 shared
[2026-02-27 11:11:07] -rw-r--r-- 2 boinc boinc    597980 Feb 27 07:45 input.tar.gz
[2026-02-27 11:11:07] -rw-r--r-- 1 boinc boinc         0 Feb 27 07:45 boinc_lockfile
[2026-02-27 11:11:07] -rw-r--r-- 1 boinc boinc      2580 Feb 27 07:45 pandaJob.out
[2026-02-27 11:11:07] -rw------- 1 boinc boinc    998489 Feb 27 07:45 agis_schedconf.cvmfs.json
[2026-02-27 11:11:07] -rw------- 1 boinc boinc       443 Feb 27 07:45 workernode_map.json
[2026-02-27 11:11:07] drwx------ 5 boinc boinc      4096 Feb 27 07:45 pilot3
[2026-02-27 11:11:07] -rw------- 1 boinc boinc 223812528 Feb 27 11:08 HITS.48838432._003115.pool.root.1
[2026-02-27 11:11:07] -rw------- 1 boinc boinc        95 Feb 27 11:08 pilot_heartbeat.json
[2026-02-27 11:11:07] -rw-r--r-- 1 boinc boinc       529 Feb 27 11:09 boinc_task_state.xml
[2026-02-27 11:11:07] -rw------- 1 boinc boinc      1026 Feb 27 11:09 memory_monitor_summary.json
[2026-02-27 11:11:07] -rw------- 1 boinc boinc   1513015 Feb 27 11:09 agis_ddmendpoints.agis.ALL.json
[2026-02-27 11:11:07] -rw------- 1 boinc boinc    381559 Feb 27 11:09 log.48838432._003115.job.log.tgz.1
[2026-02-27 11:11:07] -rw------- 1 boinc boinc      6349 Feb 27 11:09 heartbeat.json
[2026-02-27 11:11:07] -rw------- 1 boinc boinc      5020 Feb 27 11:10 pilotlog.txt
[2026-02-27 11:11:07] -rw------- 1 boinc boinc   1676845 Feb 27 11:10 log.48838432._003115.job.log.1
[2026-02-27 11:11:07] -rw------- 1 boinc boinc       357 Feb 27 11:10 output.list
[2026-02-27 11:11:07] -rw-r--r-- 1 boinc boinc       620 Feb 27 11:10 runtime_log
[2026-02-27 11:11:07] -rw------- 1 boinc boinc   2078720 Feb 27 11:10 result.tar.gz
[2026-02-27 11:11:07] -rw------- 1 boinc boinc       666 Feb 27 11:10 tIwMDmti0F9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmK13KDmC9t4lm.diag
[2026-02-27 11:11:07] -rw-r--r-- 1 boinc boinc      9205 Feb 27 11:10 runtime_log.err
[2026-02-27 11:11:07] -rw-r--r-- 1 boinc boinc        26 Feb 27 11:11 wrapper_checkpoint.txt
[2026-02-27 11:11:07] -rw-r--r-- 1 boinc boinc      8192 Feb 27 11:11 boinc_mmap_file
[2026-02-27 11:11:07] -rw-r--r-- 1 boinc boinc     21182 Feb 27 11:11 stderr.txt
[2026-02-27 11:11:07] HITS file was successfully produced:
[2026-02-27 11:11:07] -rw------- 1 boinc boinc 223812528 Feb 27 11:08 shared/HITS.pool.root.1
[2026-02-27 11:11:07]  *** Contents of shared directory: ***
[2026-02-27 11:11:07] total 499496
[2026-02-27 11:11:07] -rw-r--r-- 2 boinc boinc 284963638 Feb 27 07:45 ATLAS.root_0
[2026-02-27 11:11:07] -rw-r--r-- 2 boinc boinc     15845 Feb 27 07:45 start_atlas.sh
[2026-02-27 11:11:07] -rw-r--r-- 2 boinc boinc    597980 Feb 27 07:45 input.tar.gz
[2026-02-27 11:11:07] -rw------- 1 boinc boinc 223812528 Feb 27 11:08 HITS.pool.root.1
[2026-02-27 11:11:07] -rw------- 1 boinc boinc   2078720 Feb 27 11:10 result.tar.gz
11:11:08 (1560669): run_atlas exited; CPU time 47888.900010
11:11:08 (1560669): called boinc_finish(0)

</stderr_txt>
]]>

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