Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:23:00 (3070803): wrapper (7.7.26015): starting
11:23:00 (3070803): wrapper: running run_atlas (--nthreads 4)
[2026-02-27 11:23:00] Arguments: --nthreads 4
[2026-02-27 11:23:00] Threads: 4
[2026-02-27 11:23:00] Checking for CVMFS
[2026-02-27 11:23:00] No cvmfs_config command found, will try listing directly
[2026-02-27 11:23:00] CVMFS is ok
[2026-02-27 11:23:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-27 11:23:00] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-27 11:23:00] Further information can be found at the LHC@home message board.
[2026-02-27 11:23:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-27 11:23:00] Checking for apptainer binary...
[2026-02-27 11:23:00] which: no apptainer in ((null))
[2026-02-27 11:23:00] apptainer is not installed, using version from CVMFS
[2026-02-27 11:23:00] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-27 11:23:00] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot52/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut17.grid.cesnet.cz
[2026-02-27 11:23:00] apptainer works
[2026-02-27 11:23:00] Set ATHENA_PROC_NUMBER=4
[2026-02-27 11:23:00] Set ATHENA_CORE_NUMBER=4
[2026-02-27 11:23:00] Starting ATLAS job with PandaID=7030958617
[2026-02-27 11:23:00] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot52/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-27 14:41:55]  *** The last 200 lines of the pilot log: ***
[2026-02-27 14:41:55] 2026-02-27 13:41:06,082 | INFO     | preparing for final server update for job 7030958617 in state='finished'
[2026-02-27 14:41:55] 2026-02-27 13:41:06,082 | INFO     | reading metadata from: /scratch/boinc/var/slot52/slots/0/PanDA_Pilot-7030958617/jobReport.json
[2026-02-27 14:41:55] 2026-02-27 13:41:06,085 | INFO     | added worker_node to metadata from /scratch/boinc/var/slot52/slots/0/workernode_map.json
[2026-02-27 14:41:55] 2026-02-27 13:41:06,086 | INFO     | this job has now completed (state=finished)
[2026-02-27 14:41:55] 2026-02-27 13:41:06,086 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-27 14:41:55] 2026-02-27 13:41:06,086 | INFO     | log transfer has been attempted: DONE
[2026-02-27 14:41:55] 2026-02-27 13:41:06,086 | INFO     | job 7030958617 has finished - writing final server update
[2026-02-27 14:41:55] 2026-02-27 13:41:06,087 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_1481913/.job.ad'
[2026-02-27 14:41:55] 2026-02-27 13:41:06,087 | INFO     | total number of processed events: 400 (read)
[2026-02-27 14:41:55] 2026-02-27 13:41:06,118 | INFO     | using path: /scratch/boinc/var/slot52/slots/0/PanDA_Pilot-7030958617/memory_monitor_summary.json (trf name=prmon)
[2026-02-27 14:41:55] 2026-02-27 13:41:06,119 | INFO     | extracted standard info from prmon json
[2026-02-27 14:41:55] 2026-02-27 13:41:06,119 | INFO     | extracted standard memory fields from prmon json
[2026-02-27 14:41:55] 2026-02-27 13:41:06,119 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-27 14:41:55] 2026-02-27 13:41:06,120 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-27 14:41:55] 2026-02-27 13:41:06,120 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-27 14:41:55] 2026-02-27 13:41:06,124 | INFO     | fitting pss+swap vs Time
[2026-02-27 14:41:55] 2026-02-27 13:41:06,124 | INFO     | sum of square deviations: 2263977332.5
[2026-02-27 14:41:55] 2026-02-27 13:41:06,125 | INFO     | sum of deviations: 7405439619.500004
[2026-02-27 14:41:55] 2026-02-27 13:41:06,126 | INFO     | mean x: 1772193733.5
[2026-02-27 14:41:55] 2026-02-27 13:41:06,126 | INFO     | mean y: 2356449.4587628865
[2026-02-27 14:41:55] 2026-02-27 13:41:06,126 | INFO     | intersect: -5794465585.414915
[2026-02-27 14:41:55] 2026-02-27 13:41:06,126 | INFO     | chi2: 1.390339319331804
[2026-02-27 14:41:55] 2026-02-27 13:41:06,126 | INFO     | sum of square deviations: 2093397390.0
[2026-02-27 14:41:55] 2026-02-27 13:41:06,128 | INFO     | sum of deviations: 7054985804.999997
[2026-02-27 14:41:55] 2026-02-27 13:41:06,128 | INFO     | mean x: 1772193581.0
[2026-02-27 14:41:55] 2026-02-27 13:41:06,128 | INFO     | mean y: 2356137.8465608465
[2026-02-27 14:41:55] 2026-02-27 13:41:06,128 | INFO     | intersect: -5970136527.612965
[2026-02-27 14:41:55] 2026-02-27 13:41:06,128 | INFO     | chi2: 1.3906906023740824
[2026-02-27 14:41:55] 2026-02-27 13:41:06,129 | INFO     | current chi2=1.3906906023740824 (change=-0.025265993516395573 %)
[2026-02-27 14:41:55] 2026-02-27 13:41:06,129 | INFO     | right removable region: 188
[2026-02-27 14:41:55] 2026-02-27 13:41:06,129 | INFO     | sum of square deviations: 2093397390.0
[2026-02-27 14:41:55] 2026-02-27 13:41:06,130 | INFO     | sum of deviations: -17286903399.0
[2026-02-27 14:41:55] 2026-02-27 13:41:06,130 | INFO     | mean x: 1772193886.0
[2026-02-27 14:41:55] 2026-02-27 13:41:06,130 | INFO     | mean y: 2378218.9735449734
[2026-02-27 14:41:55] 2026-02-27 13:41:06,130 | INFO     | intersect: 14636840198.301998
[2026-02-27 14:41:55] 2026-02-27 13:41:06,131 | INFO     | chi2: 0.050060327589348516
[2026-02-27 14:41:55] 2026-02-27 13:41:06,131 | INFO     | current chi2=0.050060327589348516 (change=96.39941653858948 %)
[2026-02-27 14:41:55] 2026-02-27 13:41:06,131 | INFO     | sum of square deviations: 1931608310.0
[2026-02-27 14:41:55] 2026-02-27 13:41:06,132 | INFO     | sum of deviations: -13679620849.5
[2026-02-27 14:41:55] 2026-02-27 13:41:06,132 | INFO     | mean x: 1772194038.5
[2026-02-27 14:41:55] 2026-02-27 13:41:06,132 | INFO     | mean y: 2374814.092391304
[2026-02-27 14:41:55] 2026-02-27 13:41:06,132 | INFO     | intersect: 12553026202.843254
[2026-02-27 14:41:55] 2026-02-27 13:41:06,133 | INFO     | chi2: 0.0441304942004075
[2026-02-27 14:41:55] 2026-02-27 13:41:06,133 | INFO     | current chi2=0.0441304942004075 (change=11.845374719846463 %)
[2026-02-27 14:41:55] 2026-02-27 13:41:06,133 | INFO     | left removable region: 20
[2026-02-27 14:41:55] 2026-02-27 13:41:06,133 | INFO     | sum of square deviations: 1470248962.0
[2026-02-27 14:41:55] 2026-02-27 13:41:06,134 | INFO     | sum of deviations: -6196521855.499999
[2026-02-27 14:41:55] 2026-02-27 13:41:06,134 | INFO     | mean x: 1772194160.5
[2026-02-27 14:41:55] 2026-02-27 13:41:06,134 | INFO     | mean y: 2367144.2083333335
[2026-02-27 14:41:55] 2026-02-27 13:41:06,135 | INFO     | intersect: 7471469406.174578
[2026-02-27 14:41:55] 2026-02-27 13:41:06,135 | INFO     | chi2: 0.02288761010740662
[2026-02-27 14:41:55] 2026-02-27 13:41:06,135 | INFO     | current memory leak: -4.21 B/s (using 168 data points, chi2=0.02)
[2026-02-27 14:41:55] 2026-02-27 13:41:06,136 | INFO     | could have reported an average CPU frequency of 2688 MHz (10 samples)
[2026-02-27 14:41:55] 2026-02-27 13:41:06,136 | INFO     | ..............................
[2026-02-27 14:41:55] 2026-02-27 13:41:06,136 | INFO     | . Timing measurements:
[2026-02-27 14:41:55] 2026-02-27 13:41:06,136 | INFO     | . get job = 0 s
[2026-02-27 14:41:55] 2026-02-27 13:41:06,136 | INFO     | . initial setup = 12 s
[2026-02-27 14:41:55] 2026-02-27 13:41:06,136 | INFO     | . payload setup = 12 s
[2026-02-27 14:41:55] 2026-02-27 13:41:06,136 | INFO     | . stage-in = 0 s
[2026-02-27 14:41:55] 2026-02-27 13:41:06,136 | INFO     | . payload execution = 11820 s
[2026-02-27 14:41:55] 2026-02-27 13:41:06,136 | INFO     | . stage-out = 1 s
[2026-02-27 14:41:55] 2026-02-27 13:41:06,137 | INFO     | . log creation = 0 s
[2026-02-27 14:41:55] 2026-02-27 13:41:06,137 | INFO     | ..............................
[2026-02-27 14:41:55] 2026-02-27 13:41:06,238 | INFO     | 
[2026-02-27 14:41:55] 2026-02-27 13:41:06,239 | INFO     | job summary report
[2026-02-27 14:41:55] 2026-02-27 13:41:06,239 | INFO     | --------------------------------------------------
[2026-02-27 14:41:55] 2026-02-27 13:41:06,239 | INFO     | PanDA job id: 7030958617
[2026-02-27 14:41:55] 2026-02-27 13:41:06,239 | INFO     | task id: 48838577
[2026-02-27 14:41:55] 2026-02-27 13:41:06,239 | INFO     | errors: (none)
[2026-02-27 14:41:55] 2026-02-27 13:41:06,240 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-27 14:41:55] 2026-02-27 13:41:06,240 | INFO     | pilot state: finished 
[2026-02-27 14:41:55] 2026-02-27 13:41:06,240 | INFO     | transexitcode: 0
[2026-02-27 14:41:55] 2026-02-27 13:41:06,240 | INFO     | exeerrorcode: 0
[2026-02-27 14:41:55] 2026-02-27 13:41:06,240 | INFO     | exeerrordiag: 
[2026-02-27 14:41:55] 2026-02-27 13:41:06,240 | INFO     | exitcode: 0
[2026-02-27 14:41:55] 2026-02-27 13:41:06,240 | INFO     | exitmsg: OK
[2026-02-27 14:41:55] 2026-02-27 13:41:06,240 | INFO     | cpuconsumptiontime: 44822 s
[2026-02-27 14:41:55] 2026-02-27 13:41:06,240 | INFO     | nevents: 400
[2026-02-27 14:41:55] 2026-02-27 13:41:06,240 | INFO     | neventsw: 0
[2026-02-27 14:41:55] 2026-02-27 13:41:06,240 | INFO     | pid: 3090480
[2026-02-27 14:41:55] 2026-02-27 13:41:06,241 | INFO     | pgrp: 3090480
[2026-02-27 14:41:55] 2026-02-27 13:41:06,241 | INFO     | corecount: 4
[2026-02-27 14:41:55] 2026-02-27 13:41:06,241 | INFO     | event service: False
[2026-02-27 14:41:55] 2026-02-27 13:41:06,241 | INFO     | sizes: {0: 2282082, 1: 2282316, 11: 2282316, 11837: 2312385, 11839: 2326830, 11843: 2326886, 11844: 2327208}
[2026-02-27 14:41:55] 2026-02-27 13:41:06,241 | INFO     | --------------------------------------------------
[2026-02-27 14:41:55] 2026-02-27 13:41:06,241 | INFO     | 
[2026-02-27 14:41:55] 2026-02-27 13:41:06,241 | INFO     | executing command: ls -lF /scratch/boinc/var/slot52/slots/0
[2026-02-27 14:41:55] 2026-02-27 13:41:06,281 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-27 14:41:55] 2026-02-27 13:41:06,281 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-27 14:41:55] 2026-02-27 13:41:06,281 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-27 14:41:55] 2026-02-27 13:41:06,281 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-27 14:41:55] 2026-02-27 13:41:06,282 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-27 14:41:55] 2026-02-27 13:41:06,282 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-27 14:41:55] 2026-02-27 13:41:06,282 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-27 14:41:55] 2026-02-27 13:41:06,282 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-27 14:41:55] 2026-02-27 13:41:06,282 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-27 14:41:55] 2026-02-27 13:41:06,282 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-27 14:41:55] 2026-02-27 13:41:06,282 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-27 14:41:55] 2026-02-27 13:41:06,283 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-27 14:41:55] 2026-02-27 13:41:06,283 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-27 14:41:55] 2026-02-27 13:41:06,283 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-27 14:41:55] 2026-02-27 13:41:06,283 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-27 14:41:55] 2026-02-27 13:41:06,283 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-27 14:41:55] 2026-02-27 13:41:06,283 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-27 14:41:55] 2026-02-27 13:41:06,283 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-27 14:41:55] 2026-02-27 13:41:06,283 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-27 14:41:55] 2026-02-27 13:41:06,283 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-27 14:41:55] 2026-02-27 13:41:06,283 | INFO     | job 7030958617 has completed (purged errors)
[2026-02-27 14:41:55] 2026-02-27 13:41:06,284 | INFO     | overall cleanup function is called
[2026-02-27 14:41:55] 2026-02-27 13:41:06,914 | INFO     | PID=3078958 has CPU usage=23.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-02-27 14:41:55] 2026-02-27 13:41:06,915 | INFO     | .. there are 22 such processes running
[2026-02-27 14:41:55] 2026-02-27 13:41:07,294 | INFO     | --- collectZombieJob: --- 10, [3090480]
[2026-02-27 14:41:55] 2026-02-27 13:41:07,295 | INFO     | zombie collector waiting for pid 3090480
[2026-02-27 14:41:55] 2026-02-27 13:41:07,295 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-27 14:41:55] 2026-02-27 13:41:07,295 | INFO     | collected zombie processes
[2026-02-27 14:41:55] 2026-02-27 13:41:07,295 | INFO     | will attempt to kill all subprocesses of pid=3090480
[2026-02-27 14:41:55] 2026-02-27 13:41:08,071 | INFO     | process IDs to be killed: [3090480] (in reverse order)
[2026-02-27 14:41:55] 2026-02-27 13:41:08,401 | WARNING  | found no corresponding commands to process id(s)
[2026-02-27 14:41:55] 2026-02-27 13:41:08,402 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-27 14:41:55] 2026-02-27 13:41:08,430 | INFO     | did not find any defunct processes belonging to 3090480
[2026-02-27 14:41:55] 2026-02-27 13:41:08,454 | INFO     | did not find any defunct processes belonging to 3090480
[2026-02-27 14:41:55] 2026-02-27 13:41:08,454 | INFO     | ready for new job
[2026-02-27 14:41:55] 2026-02-27 13:41:08,454 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-27 14:41:55] 2026-02-27 13:41:08,457 | INFO     | **************************************
[2026-02-27 14:41:55] 2026-02-27 13:41:08,457 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-27 14:41:55] 2026-02-27 13:41:08,457 | INFO     | **************************************
[2026-02-27 14:41:55] 2026-02-27 13:41:08,457 | INFO     | 
[2026-02-27 14:41:55] 2026-02-27 13:41:08,466 | INFO     | architecture information:
[2026-02-27 14:41:55] 2026-02-27 13:41:08,467 | INFO     | executing command: cat /etc/os-release
[2026-02-27 14:41:55] 2026-02-27 13:41:08,493 | INFO     | cat /etc/os-release:
[2026-02-27 14:41:55] NAME="CentOS Linux"
[2026-02-27 14:41:55] VERSION="7 (Core)"
[2026-02-27 14:41:55] ID="centos"
[2026-02-27 14:41:55] ID_LIKE="rhel fedora"
[2026-02-27 14:41:55] VERSION_ID="7"
[2026-02-27 14:41:55] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-27 14:41:55] ANSI_COLOR="0;31"
[2026-02-27 14:41:55] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-27 14:41:55] HOME_URL="https://www.centos.org/"
[2026-02-27 14:41:55] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-27 14:41:55] 
[2026-02-27 14:41:55] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-27 14:41:55] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-27 14:41:55] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-27 14:41:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-27 14:41:55] 
[2026-02-27 14:41:55] 2026-02-27 13:41:08,493 | INFO     | **************************************
[2026-02-27 14:41:55] 2026-02-27 13:41:08,997 | INFO     | executing command: df -mP /scratch/boinc/var/slot52/slots/0
[2026-02-27 14:41:55] 2026-02-27 13:41:09,022 | INFO     | sufficient remaining disk space (3305641082880 B)
[2026-02-27 14:41:55] 2026-02-27 13:41:09,022 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-27 14:41:55] 2026-02-27 13:41:09,023 | INFO     | current server update state: UPDATING_FINAL
[2026-02-27 14:41:55] 2026-02-27 13:41:09,023 | INFO     | update_server=False
[2026-02-27 14:41:55] 2026-02-27 13:41:09,023 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-27 14:41:55] 2026-02-27 13:41:09,023 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-27 14:41:55] 2026-02-27 13:41:09,023 | INFO     | aborting loop
[2026-02-27 14:41:55] 2026-02-27 13:41:09,363 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-27 14:41:55] 2026-02-27 13:41:09,834 | INFO     | all data control threads have been joined
[2026-02-27 14:41:55] 2026-02-27 13:41:10,028 | INFO     | [job] retrieve thread has finished
[2026-02-27 14:41:55] 2026-02-27 13:41:10,029 | INFO     | [job] job monitor thread has finished
[2026-02-27 14:41:55] 2026-02-27 13:41:10,147 | INFO     | [payload] failed_post thread has finished
[2026-02-27 14:41:55] 2026-02-27 13:41:10,208 | INFO     | [payload] validate_pre thread has finished
[2026-02-27 14:41:55] 2026-02-27 13:41:10,375 | INFO     | all payload control threads have been joined
[2026-02-27 14:41:55] 2026-02-27 13:41:10,428 | INFO     | [payload] execute_payloads thread has finished
[2026-02-27 14:41:55] 2026-02-27 13:41:10,590 | INFO     | all job control threads have been joined
[2026-02-27 14:41:55] 2026-02-27 13:41:10,637 | INFO     | [data] copytool_in thread has finished
[2026-02-27 14:41:55] 2026-02-27 13:41:10,840 | INFO     | [data] control thread has finished
[2026-02-27 14:41:55] 2026-02-27 13:41:10,848 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-27 14:41:55] 2026-02-27 13:41:10,952 | INFO     | [job] validate thread has finished
[2026-02-27 14:41:55] 2026-02-27 13:41:11,053 | INFO     | [job] create_data_payload thread has finished
[2026-02-27 14:41:55] 2026-02-27 13:41:11,164 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-27 14:41:55] 2026-02-27 13:41:11,247 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-27 14:41:55] 2026-02-27 13:41:11,343 | INFO     | [payload] validate_post thread has finished
[2026-02-27 14:41:55] 2026-02-27 13:41:11,368 | INFO     | [data] copytool_out thread has finished
[2026-02-27 14:41:55] 2026-02-27 13:41:11,380 | INFO     | [payload] control thread has finished
[2026-02-27 14:41:55] 2026-02-27 13:41:11,595 | INFO     | [job] control thread has finished
[2026-02-27 14:41:55] 2026-02-27 13:41:12,253 | INFO     | [job] queue monitor thread has finished
[2026-02-27 14:41:55] 2026-02-27 13:41:14,852 | INFO     | [data] queue_monitor thread has finished
[2026-02-27 14:41:55] 2026-02-27 13:41:39,769 | INFO     | PID=3078958 has CPU usage=5.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-27 14:41:55] 2026-02-27 13:41:39,769 | INFO     | .. there are 22 such processes running
[2026-02-27 14:41:55] 2026-02-27 13:41:39,769 | INFO     | found 0 job(s) in 20 queues
[2026-02-27 14:41:55] 2026-02-27 13:41:39,769 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-27 14:41:55] 2026-02-27 13:41:39,769 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-27 14:41:55] 2026-02-27 13:41:50,306 | INFO     | [monitor] cgroup control has ended
[2026-02-27 14:41:55] 2026-02-27 13:41:50,374 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22759858845504)>', '<ExcThread(monitor, started 22759609722624)>']
[2026-02-27 14:41:55] 2026-02-27 13:41:50,828 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-27 14:41:55] 2026-02-27 13:41:50,829 | INFO     | [monitor] control thread has ended
[2026-02-27 14:41:55] 2026-02-27 13:41:55,400 | INFO     | all workflow threads have been joined
[2026-02-27 14:41:55] 2026-02-27 13:41:55,401 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-27 14:41:55] 2026-02-27 13:41:55,401 | INFO     | traces error code: 0
[2026-02-27 14:41:55] 2026-02-27 13:41:55,401 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-27 14:41:55] 2026-02-27 13:41:55,595 [wrapper] ==== pilot stdout END ====
[2026-02-27 14:41:55] 2026-02-27 13:41:55,599 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-27 14:41:55] 2026-02-27 13:41:55,603 [wrapper] pilotpid: 3078958
[2026-02-27 14:41:55] 2026-02-27 13:41:55,607 [wrapper] Pilot exit status: 0
[2026-02-27 14:41:55] 2026-02-27 13:41:55,623 [wrapper] pandaids: 7030958617
[2026-02-27 14:41:55] 2026-02-27 13:41:55,815 [wrapper] cleanup supervisor_pilot 3437225 3078959
[2026-02-27 14:41:55] 2026-02-27 13:41:55,818 [wrapper] Test setup, not cleaning
[2026-02-27 14:41:55] 2026-02-27 13:41:55,821 [wrapper] apfmon messages muted
[2026-02-27 14:41:55] 2026-02-27 13:41:55,823 [wrapper] ==== wrapper stdout END ====
[2026-02-27 14:41:55] 2026-02-27 13:41:55,826 [wrapper] ==== wrapper stderr END ====
[2026-02-27 14:41:55]  *** Error codes and diagnostics ***
[2026-02-27 14:41:55]     "exeErrorCode": 0,
[2026-02-27 14:41:55]     "exeErrorDiag": "",
[2026-02-27 14:41:55]     "pilotErrorCode": 0,
[2026-02-27 14:41:55]     "pilotErrorDiag": "",
[2026-02-27 14:41:55]  *** Listing of results directory ***
[2026-02-27 14:41:55] total 509576
[2026-02-27 14:41:55] -rwx------ 1 boinc boinc     36322 Feb 26 22:50 runpilot2-wrapper.sh
[2026-02-27 14:41:55] -rw-r--r-- 1 boinc boinc      5111 Feb 26 22:52 queuedata.json
[2026-02-27 14:41:55] -rw-r--r-- 1 boinc boinc    584627 Feb 26 22:52 pilot3.tar.gz
[2026-02-27 14:41:55] -rw-r--r-- 1 boinc boinc       100 Feb 27 11:22 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-27 14:41:55] -rwxr-xr-x 1 boinc boinc      7986 Feb 27 11:22 run_atlas
[2026-02-27 14:41:55] -rw-r--r-- 1 boinc boinc       105 Feb 27 11:22 job.xml
[2026-02-27 14:41:55] -rw-r--r-- 2 boinc boinc 289527042 Feb 27 11:23 EVNT.48220197._000065.pool.root.1
[2026-02-27 14:41:55] -rw-r--r-- 1 boinc boinc      6695 Feb 27 11:23 init_data.xml
[2026-02-27 14:41:55] -rw-r--r-- 2 boinc boinc     15845 Feb 27 11:23 start_atlas.sh
[2026-02-27 14:41:55] drwxrwx--x 2 boinc boinc      4096 Feb 27 11:23 shared
[2026-02-27 14:41:55] -rw-r--r-- 2 boinc boinc    597975 Feb 27 11:23 input.tar.gz
[2026-02-27 14:41:55] -rw-r--r-- 1 boinc boinc         0 Feb 27 11:23 boinc_lockfile
[2026-02-27 14:41:55] -rw-r--r-- 1 boinc boinc      2566 Feb 27 11:23 pandaJob.out
[2026-02-27 14:41:55] -rw------- 1 boinc boinc    998481 Feb 27 11:23 agis_schedconf.cvmfs.json
[2026-02-27 14:41:55] -rw------- 1 boinc boinc       442 Feb 27 11:23 workernode_map.json
[2026-02-27 14:41:55] drwx------ 5 boinc boinc      4096 Feb 27 11:23 pilot3
[2026-02-27 14:41:55] -rw------- 1 boinc boinc 224366140 Feb 27 14:40 HITS.48838577._001613.pool.root.1
[2026-02-27 14:41:55] -rw-r--r-- 1 boinc boinc       528 Feb 27 14:40 boinc_task_state.xml
[2026-02-27 14:41:55] -rw------- 1 boinc boinc        95 Feb 27 14:40 pilot_heartbeat.json
[2026-02-27 14:41:55] -rw------- 1 boinc boinc      1026 Feb 27 14:40 memory_monitor_summary.json
[2026-02-27 14:41:55] -rw------- 1 boinc boinc   1516111 Feb 27 14:41 agis_ddmendpoints.agis.ALL.json
[2026-02-27 14:41:55] -rw------- 1 boinc boinc    365512 Feb 27 14:41 log.48838577._001613.job.log.tgz.1
[2026-02-27 14:41:55] -rw------- 1 boinc boinc      6349 Feb 27 14:41 heartbeat.json
[2026-02-27 14:41:55] -rw-r--r-- 1 boinc boinc      8192 Feb 27 14:41 boinc_mmap_file
[2026-02-27 14:41:55] -rw-r--r-- 1 boinc boinc        26 Feb 27 14:41 wrapper_checkpoint.txt
[2026-02-27 14:41:55] -rw------- 1 boinc boinc      4831 Feb 27 14:41 pilotlog.txt
[2026-02-27 14:41:55] -rw------- 1 boinc boinc   1626057 Feb 27 14:41 log.48838577._001613.job.log.1
[2026-02-27 14:41:55] -rw------- 1 boinc boinc       357 Feb 27 14:41 output.list
[2026-02-27 14:41:55] -rw-r--r-- 1 boinc boinc       620 Feb 27 14:41 runtime_log
[2026-02-27 14:41:55] -rw------- 1 boinc boinc   2007040 Feb 27 14:41 result.tar.gz
[2026-02-27 14:41:55] -rw-r--r-- 1 boinc boinc      9205 Feb 27 14:41 runtime_log.err
[2026-02-27 14:41:55] -rw------- 1 boinc boinc       666 Feb 27 14:41 Vw0NDmhQyF9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmut3KDmJvJdOn.diag
[2026-02-27 14:41:55] -rw-r--r-- 1 boinc boinc     21250 Feb 27 14:41 stderr.txt
[2026-02-27 14:41:55] HITS file was successfully produced:
[2026-02-27 14:41:55] -rw------- 1 boinc boinc 224366140 Feb 27 14:40 shared/HITS.pool.root.1
[2026-02-27 14:41:55]  *** Contents of shared directory: ***
[2026-02-27 14:41:55] total 504420
[2026-02-27 14:41:55] -rw-r--r-- 2 boinc boinc 289527042 Feb 27 11:23 ATLAS.root_0
[2026-02-27 14:41:55] -rw-r--r-- 2 boinc boinc     15845 Feb 27 11:23 start_atlas.sh
[2026-02-27 14:41:55] -rw-r--r-- 2 boinc boinc    597975 Feb 27 11:23 input.tar.gz
[2026-02-27 14:41:55] -rw------- 1 boinc boinc 224366140 Feb 27 14:40 HITS.pool.root.1
[2026-02-27 14:41:55] -rw------- 1 boinc boinc   2007040 Feb 27 14:41 result.tar.gz
14:41:57 (3070803): run_atlas exited; CPU time 45539.558008
14:41:57 (3070803): called boinc_finish(0)

</stderr_txt>
]]>

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