Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
2026-02-27 20:53:33 (6356): vboxwrapper version 26210
2026-02-27 20:53:33 (6356): BOINC client version: 8.2.4
2026-02-27 20:53:34 (6356): Detected: VirtualBox VboxManage Interface (Version: 7.1.4)
2026-02-27 20:53:35 (6356): Successfully copied 'init_data.xml' to the shared directory.
2026-02-27 20:53:35 (6356): Create VM. (boinc_be810fe7667cdfe3, slot#1)
2026-02-27 20:53:35 (6356): Setting Memory Size for VM. (4800MB)
2026-02-27 20:53:36 (6356): Setting CPU Count for VM. (8)
2026-02-27 20:53:36 (6356): Setting Chipset Options for VM.
2026-02-27 20:53:36 (6356): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-02-27 20:53:37 (6356): Setting Boot Options for VM.
2026-02-27 20:53:37 (6356): Setting Network Configuration for NAT. (Driver: virtio)
2026-02-27 20:53:37 (6356): Enabling VM Network Access.
2026-02-27 20:53:38 (6356): Disabling USB Support for VM.
2026-02-27 20:53:38 (6356): Disabling COM Port Support for VM.
2026-02-27 20:53:38 (6356): Disabling LPT Port Support for VM.
2026-02-27 20:53:38 (6356): Disabling Audio Support for VM.
2026-02-27 20:53:39 (6356): Disabling Clipboard Support for VM.
2026-02-27 20:53:39 (6356): Disabling Drag and Drop Support for VM.
2026-02-27 20:53:39 (6356): Adding storage controller(s) to VM.
2026-02-27 20:53:39 (6356): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-02-27 20:53:42 (6356): Adding VirtualBox Guest Additions to VM.
2026-02-27 20:53:42 (6356): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-02-27 20:53:42 (6356): forwarding host port 55745 to guest port 80
2026-02-27 20:53:42 (6356): Enabling remote desktop for VM.
2026-02-27 20:53:43 (6356): Required extension pack not installed, remote desktop not enabled.
2026-02-27 20:53:43 (6356): Enabling shared directory for VM.
2026-02-27 20:53:43 (6356): Starting VM using VBoxManage interface. (boinc_be810fe7667cdfe3, slot#1)
2026-02-27 20:53:50 (6356): Successfully started VM. (PID = '7300')
2026-02-27 20:53:50 (6356): Reporting VM Process ID to BOINC.
2026-02-27 20:53:50 (6356): Guest Log: BIOS: VirtualBox 7.1.4
2026-02-27 20:53:50 (6356): Guest Log: CPUID EDX: 0x178bfbff
2026-02-27 20:53:50 (6356): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-02-27 20:53:50 (6356): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-02-27 20:53:50 (6356): VM state change detected. (old = 'poweredoff', new = 'running')
2026-02-27 20:53:50 (6356): Detected: Web Application Enabled (http://localhost:55745)
2026-02-27 20:53:50 (6356): Preference change detected
2026-02-27 20:53:50 (6356): Setting CPU throttle for VM. (100%)
2026-02-27 20:53:50 (6356): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-02-27 20:53:52 (6356): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-02-27 20:53:52 (6356): Guest Log: BIOS: Booting from Hard Disk...
2026-02-27 20:53:55 (6356): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-02-27 20:53:55 (6356): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-02-27 20:53:55 (6356): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-02-27 20:53:55 (6356): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-02-27 20:53:55 (6356): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-02-27 20:53:55 (6356): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-02-27 20:53:55 (6356): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-02-27 20:53:55 (6356): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-02-27 20:53:55 (6356): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-02-27 20:53:55 (6356): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-02-27 20:53:55 (6356): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-02-27 20:53:55 (6356): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-02-27 20:53:55 (6356): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-02-27 20:53:55 (6356): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-02-27 20:53:55 (6356): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-02-27 20:53:55 (6356): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-02-27 20:53:55 (6356): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-02-27 20:53:55 (6356): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-02-27 20:53:55 (6356): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-02-27 20:53:55 (6356): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-02-27 20:53:55 (6356): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-02-27 20:53:55 (6356): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-02-27 20:53:55 (6356): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-02-27 20:53:55 (6356): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-02-27 20:53:55 (6356): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-02-27 20:53:55 (6356): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-02-27 20:53:55 (6356): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-02-27 20:53:55 (6356): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-02-27 20:53:55 (6356): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-02-27 20:53:55 (6356): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-02-27 20:53:55 (6356): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-02-27 20:53:55 (6356): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-02-27 20:54:01 (6356): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-02-27 20:54:01 (6356): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-02-27 20:54:08 (6356): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-02-27 20:54:08 (6356): Guest Log: 00:00:00.001764 main     Log opened 2026-02-27T20:54:06.288678000Z
2026-02-27 20:54:08 (6356): Guest Log: 00:00:00.001921 main     OS Product: Linux
2026-02-27 20:54:08 (6356): Guest Log: 00:00:00.001982 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-02-27 20:54:08 (6356): Guest Log: 00:00:00.002008 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-02-27 20:54:08 (6356): Guest Log: 00:00:00.002033 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-02-27 20:54:08 (6356): Guest Log: 00:00:00.002034 main     Process ID: 1382
2026-02-27 20:54:08 (6356): Guest Log: 00:00:00.002035 main     Package type: LINUX_64BITS_GENERIC
2026-02-27 20:54:08 (6356): Guest Log: 00:00:00.002917 main     5.2.32 r132073 started. Verbose level = 0
2026-02-27 20:54:08 (6356): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-02-27 20:54:08 (6356): Guest Log: [INFO] Mounting shared directory
2026-02-27 20:54:08 (6356): Guest Log: [INFO] Checking for init_data.xml
2026-02-27 20:54:14 (6356): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-02-27 20:54:14 (6356): Guest Log: [INFO] Detected branch: prod
2026-02-27 20:54:14 (6356): Guest Log: This is the prod version of the ATLAS job wrapper
2026-02-27 20:54:14 (6356): Guest Log: Copying input files
2026-02-27 20:54:16 (6356): Guest Log: Copied input files into RunAtlas.
2026-02-27 20:54:16 (6356): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-02-27 20:54:16 (6356): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-02-27 20:54:16 (6356): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-02-27 20:54:16 (6356): Guest Log: Further information can be found at the LHC@home message board.
2026-02-27 20:54:18 (6356): Guest Log: 00:00:10.005572 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 189 196 949 000ns (GuestNow=1 772 218 457 094 247 000 ns GuestLast=1 772 225 646 291 196 000 ns fSetTimeLastLoop=true )
2026-02-27 20:54:24 (6356): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-02-27 20:54:25 (6356): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-02-27 20:54:25 (6356): Guest Log: 2.6.3.0 1659 0 32184 156704 3 1 3117743 4096001 0 65024 0 0 n/a 0 0 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2026-02-27 20:54:25 (6356): Guest Log: copied the webapp to /var/www
2026-02-27 20:54:25 (6356): Guest Log: ATHENA_PROC_NUMBER=8
2026-02-27 20:54:25 (6356): Guest Log: ATHENA_CORE_NUMBER=8
2026-02-27 20:54:26 (6356): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-02-27 20:54:26 (6356): Guest Log:  *** Starting ATLAS job. (PandaID=7031077295 taskID=48838462) ***
2026-02-27 20:59:47 (6356): VM state change detected. (old = 'running', new = 'paused')
2026-02-27 21:00:07 (6356): VM state change detected. (old = 'paused', new = 'running')
2026-02-27 22:34:17 (6356): Status Report: Elapsed Time: '6000.000000'
2026-02-27 22:34:17 (6356): Status Report: CPU Time: '43542.921875'
2026-02-27 22:47:01 (6356): Guest Log:  *** Job finished ***
2026-02-27 22:47:01 (6356): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-02-27 22:47:01 (6356): Guest Log: 2026-02-27 20:46:08,994 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-02-27 22:47:01 (6356): Guest Log: 2026-02-27 20:46:08,995 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-02-27 22:47:01 (6356): Guest Log: 2026-02-27 20:46:36,076 | INFO     | [monitor] cgroup control has ended
2026-02-27 22:47:01 (6356): Guest Log: 2026-02-27 20:46:36,356 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140704455976768)>', '<ExcThread(monitor, started 140703690630912)>']
2026-02-27 22:47:01 (6356): Guest Log: 2026-02-27 20:46:36,399 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-02-27 22:47:01 (6356): Guest Log: 2026-02-27 20:46:36,399 | INFO     | [monitor] control thread has ended
2026-02-27 22:47:01 (6356): Guest Log: 2026-02-27 20:46:41,372 | INFO     | all workflow threads have been joined
2026-02-27 22:47:01 (6356): Guest Log: 2026-02-27 20:46:41,372 | INFO     | end of generic workflow (traces error code: 0)
2026-02-27 22:47:01 (6356): Guest Log: 2026-02-27 20:46:41,372 | INFO     | traces error code: 0
2026-02-27 22:47:01 (6356): Guest Log: 2026-02-27 20:46:41,372 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-02-27 22:47:01 (6356): Guest Log: 2026-02-27 20:46:41,489 [wrapper] ==== pilot stdout END ====
2026-02-27 22:47:01 (6356): Guest Log: 2026-02-27 20:46:41,496 [wrapper] ==== wrapper stdout RESUME ====
2026-02-27 22:47:01 (6356): Guest Log: 2026-02-27 20:46:41,503 [wrapper] pilotpid: 6095
2026-02-27 22:47:01 (6356): Guest Log: 2026-02-27 20:46:41,511 [wrapper] Pilot exit status: 0
2026-02-27 22:47:01 (6356): Guest Log: 2026-02-27 20:46:41,637 [wrapper] pandaids: 7031077295
2026-02-27 22:47:01 (6356): Guest Log: 2026-02-27 20:46:41,684 [wrapper] cleanup supervisor_pilot 25825 6096
2026-02-27 22:47:01 (6356): Guest Log: 2026-02-27 20:46:41,691 [wrapper] Test setup, not cleaning
2026-02-27 22:47:01 (6356): Guest Log: 2026-02-27 20:46:41,701 [wrapper] apfmon messages muted
2026-02-27 22:47:01 (6356): Guest Log: 2026-02-27 20:46:41,710 [wrapper] ==== wrapper stdout END ====
2026-02-27 22:47:01 (6356): Guest Log: 2026-02-27 20:46:41,717 [wrapper] ==== wrapper stderr END ====
2026-02-27 22:47:01 (6356): Guest Log:  *** Error codes and diagnostics ***
2026-02-27 22:47:01 (6356): Guest Log:     "exeErrorCode": 0,
2026-02-27 22:47:01 (6356): Guest Log:     "exeErrorDiag": "",
2026-02-27 22:47:01 (6356): Guest Log:     "pilotErrorCode": 0,
2026-02-27 22:47:01 (6356): Guest Log:     "pilotErrorDiag": "",
2026-02-27 22:47:01 (6356): Guest Log:  *** Listing of results directory ***
2026-02-27 22:47:01 (6356): Guest Log: total 211808
2026-02-27 22:47:01 (6356): Guest Log: -rw-r--r--. 1 atlas atlas    584627 Feb 26 21:47 pilot3.tar.gz
2026-02-27 22:47:01 (6356): Guest Log: -rwx------. 1 atlas atlas     36322 Feb 26 21:48 runpilot2-wrapper.sh
2026-02-27 22:47:01 (6356): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Feb 26 21:49 queuedata.json
2026-02-27 22:47:01 (6356): Guest Log: -rwxr-xr-x. 1 atlas atlas     11859 Feb 27 18:54 init_data.xml
2026-02-27 22:47:01 (6356): Guest Log: -rwxr-xr-x. 1 atlas atlas    597959 Feb 27 18:54 input.tar.gz
2026-02-27 22:47:01 (6356): Guest Log: -rwxr-xr-x. 1 atlas atlas     15845 Feb 27 18:54 start_atlas.sh
2026-02-27 22:47:01 (6356): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Feb 27 18:54 EVNT.48220133._000055.pool.root.1 -> /data/./ATLAS.root_0
2026-02-27 22:47:01 (6356): Guest Log: -rw-r--r--. 1 atlas atlas      2561 Feb 27 18:54 pandaJob.out
2026-02-27 22:47:01 (6356): Guest Log: -rw-------. 1 atlas atlas    998790 Feb 27 18:55 agis_schedconf.cvmfs.json
2026-02-27 22:47:01 (6356): Guest Log: -rw-------. 1 atlas atlas   1513015 Feb 27 18:55 agis_ddmendpoints.agis.ALL.json
2026-02-27 22:47:01 (6356): Guest Log: -rw-------. 1 atlas atlas       427 Feb 27 18:55 workernode_map.json
2026-02-27 22:47:01 (6356): Guest Log: drwx------. 5 atlas atlas      4096 Feb 27 18:55 pilot3
2026-02-27 22:47:01 (6356): Guest Log: -rw-------. 1 atlas atlas 210431683 Feb 27 20:44 HITS.48838462._001388.pool.root.1
2026-02-27 22:47:01 (6356): Guest Log: -rw-------. 1 atlas atlas        95 Feb 27 20:45 pilot_heartbeat.json
2026-02-27 22:47:01 (6356): Guest Log: -rw-------. 1 atlas atlas      1034 Feb 27 20:45 memory_monitor_summary.json
2026-02-27 22:47:01 (6356): Guest Log: -rw-------. 1 atlas atlas    363252 Feb 27 20:45 log.48838462._001388.job.log.tgz.1
2026-02-27 22:47:01 (6356): Guest Log: -rw-------. 1 atlas atlas      6353 Feb 27 20:45 heartbeat.json
2026-02-27 22:47:01 (6356): Guest Log: -rw-------. 1 atlas atlas      4873 Feb 27 20:46 pilotlog.txt
2026-02-27 22:47:01 (6356): Guest Log: -rw-------. 1 atlas atlas    937218 Feb 27 20:46 log.48838462._001388.job.log.1
2026-02-27 22:47:01 (6356): Guest Log: -rw-------. 1 atlas atlas       357 Feb 27 20:46 output.list
2026-02-27 22:47:01 (6356): Guest Log: -rw-r--r--. 1 atlas atlas       620 Feb 27 20:46 runtime_log
2026-02-27 22:47:01 (6356): Guest Log: -rw-------. 1 atlas atlas   1320960 Feb 27 20:46 result.tar.gz
2026-02-27 22:47:01 (6356): Guest Log: -rw-------. 1 atlas atlas       651 Feb 27 20:46 vHsLDm2OyF9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmgm3KDmM72FAo.diag
2026-02-27 22:47:01 (6356): Guest Log: -rw-r--r--. 1 atlas atlas      8732 Feb 27 20:46 runtime_log.err
2026-02-27 22:47:01 (6356): Guest Log: Looking for outputfile HITS.48838462._001388.pool.root.1
2026-02-27 22:47:01 (6356): Guest Log: HITS file was successfully produced
2026-02-27 22:47:01 (6356): Guest Log: -rw-------. 1 atlas atlas 210431683 Feb 27 20:44 /home/atlas/RunAtlas/HITS.48838462._001388.pool.root.1
2026-02-27 22:47:02 (6356): Guest Log: Successfully finished the ATLAS job!
2026-02-27 22:47:02 (6356): Guest Log: Copying the results back to the shared directory!
2026-02-27 22:47:03 (6356): Guest Log:  *** Contents of shared directory: ***
2026-02-27 22:47:03 (6356): Guest Log: total 476856
2026-02-27 22:47:03 (6356): Guest Log: -rwxrwxrwx. 1 root root 275915937 Feb 27 18:53 ATLAS.root_0
2026-02-27 22:47:03 (6356): Guest Log: -rwxrwxrwx. 1 root root 210431683 Feb 27  2026 HITS.pool.root.1
2026-02-27 22:47:03 (6356): Guest Log: -rwxrwxrwx. 1 root root     11859 Feb 27 18:53 init_data.xml
2026-02-27 22:47:03 (6356): Guest Log: -rwxrwxrwx. 1 root root    597959 Feb 27 04:30 input.tar.gz
2026-02-27 22:47:03 (6356): Guest Log: -rwxrwxrwx. 1 root root   1320960 Feb 27  2026 result.tar.gz
2026-02-27 22:47:03 (6356): Guest Log: -rwxrwxrwx. 1 root root     15845 Feb 27 04:30 start_atlas.sh
2026-02-27 22:47:03 (6356): Guest Log:  *** Success! Shutting down the machine. ***
2026-02-27 22:47:03 (6356): VM Completion File Detected.
2026-02-27 22:47:03 (6356): Powering off VM.
2026-02-27 22:47:03 (6356): Successfully stopped VM.
2026-02-27 22:47:03 (6356): Deregistering VM. (boinc_be810fe7667cdfe3, slot#1)
2026-02-27 22:47:03 (6356): Removing network bandwidth throttle group from VM.
2026-02-27 22:47:04 (6356): Removing VM from VirtualBox.
2026-02-27 22:47:09 (6356): called boinc_finish(0)

</stderr_txt>
]]>

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