Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
20:26:57 (2931): wrapper (7.7.26015): starting
20:26:57 (2931): wrapper: running run_atlas (--nthreads 8)
[2026-02-27 20:26:57] Arguments: --nthreads 8
[2026-02-27 20:26:57] Threads: 8
[2026-02-27 20:26:57] Checking for CVMFS
[2026-02-27 20:26:57] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-27 20:27:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-27 20:27:22] Running cvmfs_config stat atlas.cern.ch
[2026-02-27 20:27:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-27 20:27:22] 2.11.2.0 18097 106393 130328 156706 1 49 21046531 25165824 0 130560 38 35921695 99.763 32589976 2155 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://141.99.253.245:3128/ 1
[2026-02-27 20:27:22] CVMFS is ok
[2026-02-27 20:27:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-27 20:27:22] Checking for apptainer binary...
[2026-02-27 20:27:22] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-27 20:27:22] Running /usr/bin/apptainer --version
[2026-02-27 20:27:22] apptainer version 1.3.2-1.el7
[2026-02-27 20:27:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-27 20:27:23] cg-vwn387.simple-grid.lan
[2026-02-27 20:27:23] apptainer works
[2026-02-27 20:27:23] Set ATHENA_PROC_NUMBER=8
[2026-02-27 20:27:23] Set ATHENA_CORE_NUMBER=8
[2026-02-27 20:27:23] Starting ATLAS job with PandaID=7031187316
[2026-02-27 20:27:23] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/16 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-28 03:30:23]  *** The last 200 lines of the pilot log: ***
[2026-02-28 03:30:23] 2026-02-28 02:29:39,286 | INFO     | added worker_node to metadata from /var/lib/boinc/slots/16/workernode_map.json
[2026-02-28 03:30:23] 2026-02-28 02:29:39,286 | INFO     | this job has now completed (state=finished)
[2026-02-28 03:30:23] 2026-02-28 02:29:39,287 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-28 03:30:23] 2026-02-28 02:29:39,287 | INFO     | log transfer has been attempted: DONE
[2026-02-28 03:30:23] 2026-02-28 02:29:39,287 | INFO     | job 7031187316 has finished - writing final server update
[2026-02-28 03:30:23] 2026-02-28 02:29:39,287 | INFO     | total number of processed events: 400 (read)
[2026-02-28 03:30:23] 2026-02-28 02:29:39,290 | INFO     | using path: /var/lib/boinc/slots/16/PanDA_Pilot-7031187316/memory_monitor_summary.json (trf name=prmon)
[2026-02-28 03:30:23] 2026-02-28 02:29:39,291 | INFO     | extracted standard info from prmon json
[2026-02-28 03:30:23] 2026-02-28 02:29:39,291 | INFO     | extracted standard memory fields from prmon json
[2026-02-28 03:30:23] 2026-02-28 02:29:39,292 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-28 03:30:23] 2026-02-28 02:29:39,292 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-28 03:30:23] 2026-02-28 02:29:39,292 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-28 03:30:23] 2026-02-28 02:29:39,301 | INFO     | fitting pss+swap vs Time
[2026-02-28 03:30:23] 2026-02-28 02:29:39,302 | INFO     | sum of square deviations: 22002747427.5
[2026-02-28 03:30:23] 2026-02-28 02:29:39,308 | INFO     | sum of deviations: -44510712745.500015
[2026-02-28 03:30:23] 2026-02-28 02:29:39,308 | INFO     | mean x: 1772233136.5
[2026-02-28 03:30:23] 2026-02-28 02:29:39,308 | INFO     | mean y: 2502992.649758454
[2026-02-28 03:30:23] 2026-02-28 02:29:39,308 | INFO     | intersect: 3587662542.2347403
[2026-02-28 03:30:23] 2026-02-28 02:29:39,309 | INFO     | chi2: 1.7681597520790404
[2026-02-28 03:30:23] 2026-02-28 02:29:39,310 | INFO     | sum of square deviations: 21215132660.0
[2026-02-28 03:30:23] 2026-02-28 02:29:39,316 | INFO     | sum of deviations: -45409398447.99999
[2026-02-28 03:30:23] 2026-02-28 02:29:39,316 | INFO     | mean x: 1772232984.0
[2026-02-28 03:30:23] 2026-02-28 02:29:39,316 | INFO     | mean y: 2502818.6356968214
[2026-02-28 03:30:23] 2026-02-28 02:29:39,317 | INFO     | intersect: 3795834446.7181954
[2026-02-28 03:30:23] 2026-02-28 02:29:39,317 | INFO     | chi2: 1.7655608530305784
[2026-02-28 03:30:23] 2026-02-28 02:29:39,318 | INFO     | current chi2=1.7655608530305784 (change=0.14698327147228402 %)
[2026-02-28 03:30:23] 2026-02-28 02:29:39,318 | INFO     | right removable region: 408
[2026-02-28 03:30:23] 2026-02-28 02:29:39,318 | INFO     | sum of square deviations: 21215132660.0
[2026-02-28 03:30:23] 2026-02-28 02:29:39,324 | INFO     | sum of deviations: -105998700698.0
[2026-02-28 03:30:23] 2026-02-28 02:29:39,324 | INFO     | mean x: 1772233289.0
[2026-02-28 03:30:23] 2026-02-28 02:29:39,324 | INFO     | mean y: 2514828.9413202936
[2026-02-28 03:30:23] 2026-02-28 02:29:39,325 | INFO     | intersect: 8857252104.373617
[2026-02-28 03:30:23] 2026-02-28 02:29:39,325 | INFO     | chi2: 0.33430500082591835
[2026-02-28 03:30:23] 2026-02-28 02:29:39,326 | INFO     | current chi2=0.33430500082591835 (change=81.09305449166371 %)
[2026-02-28 03:30:23] 2026-02-28 02:29:39,326 | INFO     | sum of square deviations: 20446541505.0
[2026-02-28 03:30:23] 2026-02-28 02:29:39,332 | INFO     | sum of deviations: -105372862993.5
[2026-02-28 03:30:23] 2026-02-28 02:29:39,332 | INFO     | mean x: 1772233441.5
[2026-02-28 03:30:23] 2026-02-28 02:29:39,332 | INFO     | mean y: 2514694.551980198
[2026-02-28 03:30:23] 2026-02-28 02:29:39,332 | INFO     | intersect: 9135859401.186684
[2026-02-28 03:30:23] 2026-02-28 02:29:39,333 | INFO     | chi2: 0.31765915278773754
[2026-02-28 03:30:23] 2026-02-28 02:29:39,333 | INFO     | current chi2=0.31765915278773754 (change=4.979239914765365 %)
[2026-02-28 03:30:23] 2026-02-28 02:29:39,333 | INFO     | left removable region: 20
[2026-02-28 03:30:23] 2026-02-28 02:29:39,334 | INFO     | sum of square deviations: 18112179597.0
[2026-02-28 03:30:23] 2026-02-28 02:29:39,339 | INFO     | sum of deviations: -80909605871.50003
[2026-02-28 03:30:23] 2026-02-28 02:29:39,339 | INFO     | mean x: 1772233563.5
[2026-02-28 03:30:23] 2026-02-28 02:29:39,340 | INFO     | mean y: 2509417.37371134
[2026-02-28 03:30:23] 2026-02-28 02:29:39,340 | INFO     | intersect: 7919321326.569857
[2026-02-28 03:30:23] 2026-02-28 02:29:39,340 | INFO     | chi2: 0.28220604725738474
[2026-02-28 03:30:23] 2026-02-28 02:29:39,341 | INFO     | current memory leak: -4.47 B/s (using 388 data points, chi2=0.28)
[2026-02-28 03:30:23] 2026-02-28 02:29:39,342 | INFO     | could have reported an average CPU frequency of 1999 MHz (18 samples)
[2026-02-28 03:30:23] 2026-02-28 02:29:39,342 | INFO     | ..............................
[2026-02-28 03:30:23] 2026-02-28 02:29:39,342 | INFO     | . Timing measurements:
[2026-02-28 03:30:23] 2026-02-28 02:29:39,342 | INFO     | . get job = 0 s
[2026-02-28 03:30:23] 2026-02-28 02:29:39,343 | INFO     | . initial setup = 7 s
[2026-02-28 03:30:23] 2026-02-28 02:29:39,343 | INFO     | . payload setup = 7 s
[2026-02-28 03:30:23] 2026-02-28 02:29:39,343 | INFO     | . stage-in = 0 s
[2026-02-28 03:30:23] 2026-02-28 02:29:39,343 | INFO     | . payload execution = 25235 s
[2026-02-28 03:30:23] 2026-02-28 02:29:39,343 | INFO     | . stage-out = 1 s
[2026-02-28 03:30:23] 2026-02-28 02:29:39,343 | INFO     | . log creation = 0 s
[2026-02-28 03:30:23] 2026-02-28 02:29:39,343 | INFO     | ..............................
[2026-02-28 03:30:23] 2026-02-28 02:29:39,465 | INFO     | 
[2026-02-28 03:30:23] 2026-02-28 02:29:39,466 | INFO     | job summary report
[2026-02-28 03:30:23] 2026-02-28 02:29:39,466 | INFO     | --------------------------------------------------
[2026-02-28 03:30:23] 2026-02-28 02:29:39,466 | INFO     | PanDA job id: 7031187316
[2026-02-28 03:30:23] 2026-02-28 02:29:39,466 | INFO     | task id: 48842356
[2026-02-28 03:30:23] 2026-02-28 02:29:39,466 | INFO     | errors: (none)
[2026-02-28 03:30:23] 2026-02-28 02:29:39,466 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-28 03:30:23] 2026-02-28 02:29:39,467 | INFO     | pilot state: finished 
[2026-02-28 03:30:23] 2026-02-28 02:29:39,467 | INFO     | transexitcode: 0
[2026-02-28 03:30:23] 2026-02-28 02:29:39,467 | INFO     | exeerrorcode: 0
[2026-02-28 03:30:23] 2026-02-28 02:29:39,467 | INFO     | exeerrordiag: 
[2026-02-28 03:30:23] 2026-02-28 02:29:39,467 | INFO     | exitcode: 0
[2026-02-28 03:30:23] 2026-02-28 02:29:39,468 | INFO     | exitmsg: OK
[2026-02-28 03:30:23] 2026-02-28 02:29:39,468 | INFO     | cpuconsumptiontime: 192031 s
[2026-02-28 03:30:23] 2026-02-28 02:29:39,468 | INFO     | nevents: 400
[2026-02-28 03:30:23] 2026-02-28 02:29:39,468 | INFO     | neventsw: 0
[2026-02-28 03:30:23] 2026-02-28 02:29:39,468 | INFO     | pid: 11401
[2026-02-28 03:30:23] 2026-02-28 02:29:39,468 | INFO     | pgrp: 11401
[2026-02-28 03:30:23] 2026-02-28 02:29:39,468 | INFO     | corecount: 8
[2026-02-28 03:30:23] 2026-02-28 02:29:39,468 | INFO     | event service: False
[2026-02-28 03:30:23] 2026-02-28 02:29:39,469 | INFO     | sizes: {0: 2281897, 1: 2282358, 12: 2282358, 25246: 2318342, 25247: 2327342, 25250: 2327398, 25253: 2327720}
[2026-02-28 03:30:23] 2026-02-28 02:29:39,469 | INFO     | --------------------------------------------------
[2026-02-28 03:30:23] 2026-02-28 02:29:39,469 | INFO     | 
[2026-02-28 03:30:23] 2026-02-28 02:29:39,469 | INFO     | executing command: ls -lF /var/lib/boinc/slots/16
[2026-02-28 03:30:23] 2026-02-28 02:29:39,475 | WARNING  | process 11401 can no longer be monitored (due to stat problems) - aborting
[2026-02-28 03:30:23] 2026-02-28 02:29:39,476 | INFO     | using path: /var/lib/boinc/slots/16/PanDA_Pilot-7031187316/memory_monitor_summary.json (trf name=prmon)
[2026-02-28 03:30:23] 2026-02-28 02:29:39,507 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-28 03:30:23] 2026-02-28 02:29:39,508 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-28 03:30:23] 2026-02-28 02:29:39,508 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-28 03:30:23] 2026-02-28 02:29:39,508 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-28 03:30:23] 2026-02-28 02:29:39,508 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-28 03:30:23] 2026-02-28 02:29:39,508 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-28 03:30:23] 2026-02-28 02:29:39,508 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-28 03:30:23] 2026-02-28 02:29:39,509 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-28 03:30:23] 2026-02-28 02:29:39,509 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-28 03:30:23] 2026-02-28 02:29:39,509 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-28 03:30:23] 2026-02-28 02:29:39,509 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-28 03:30:23] 2026-02-28 02:29:39,509 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-28 03:30:23] 2026-02-28 02:29:39,509 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-28 03:30:23] 2026-02-28 02:29:39,509 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-28 03:30:23] 2026-02-28 02:29:39,509 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-28 03:30:23] 2026-02-28 02:29:39,510 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-28 03:30:23] 2026-02-28 02:29:39,510 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-28 03:30:23] 2026-02-28 02:29:39,510 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-28 03:30:23] 2026-02-28 02:29:39,510 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-28 03:30:23] 2026-02-28 02:29:39,510 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-28 03:30:23] 2026-02-28 02:29:39,511 | INFO     | job 7031187316 has completed (purged errors)
[2026-02-28 03:30:23] 2026-02-28 02:29:39,511 | INFO     | overall cleanup function is called
[2026-02-28 03:30:23] 2026-02-28 02:29:39,545 | INFO     | number of running child processes to parent process 11401: 1
[2026-02-28 03:30:23] 2026-02-28 02:29:39,546 | INFO     | maximum number of monitored processes: 7
[2026-02-28 03:30:23] 2026-02-28 02:29:39,546 | INFO     | aborting job monitoring since job object (job id=7031187316) has expired
[2026-02-28 03:30:23] 2026-02-28 02:29:40,518 | INFO     | --- collectZombieJob: --- 10, [11401]
[2026-02-28 03:30:23] 2026-02-28 02:29:40,519 | INFO     | zombie collector waiting for pid 11401
[2026-02-28 03:30:23] 2026-02-28 02:29:40,519 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-28 03:30:23] 2026-02-28 02:29:40,519 | INFO     | collected zombie processes
[2026-02-28 03:30:23] 2026-02-28 02:29:40,519 | INFO     | will attempt to kill all subprocesses of pid=11401
[2026-02-28 03:30:23] 2026-02-28 02:29:40,582 | INFO     | process IDs to be killed: [11401] (in reverse order)
[2026-02-28 03:30:23] 2026-02-28 02:29:40,645 | WARNING  | found no corresponding commands to process id(s)
[2026-02-28 03:30:23] 2026-02-28 02:29:40,645 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-28 03:30:23] 2026-02-28 02:29:40,647 | INFO     | did not find any defunct processes belonging to 11401
[2026-02-28 03:30:23] 2026-02-28 02:29:40,649 | INFO     | did not find any defunct processes belonging to 11401
[2026-02-28 03:30:23] 2026-02-28 02:29:40,649 | INFO     | ready for new job
[2026-02-28 03:30:23] 2026-02-28 02:29:40,649 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-28 03:30:23] 2026-02-28 02:29:40,652 | INFO     | **************************************
[2026-02-28 03:30:23] 2026-02-28 02:29:40,652 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-28 03:30:23] 2026-02-28 02:29:40,652 | INFO     | **************************************
[2026-02-28 03:30:23] 2026-02-28 02:29:40,652 | INFO     | 
[2026-02-28 03:30:23] 2026-02-28 02:29:40,653 | INFO     | pilot is running in a VM
[2026-02-28 03:30:23] 2026-02-28 02:29:40,653 | INFO     | architecture information:
[2026-02-28 03:30:23] 2026-02-28 02:29:40,654 | INFO     | executing command: cat /etc/os-release
[2026-02-28 03:30:23] 2026-02-28 02:29:40,679 | INFO     | cat /etc/os-release:
[2026-02-28 03:30:23] NAME="CentOS Linux"
[2026-02-28 03:30:23] VERSION="7 (Core)"
[2026-02-28 03:30:23] ID="centos"
[2026-02-28 03:30:23] ID_LIKE="rhel fedora"
[2026-02-28 03:30:23] VERSION_ID="7"
[2026-02-28 03:30:23] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-28 03:30:23] ANSI_COLOR="0;31"
[2026-02-28 03:30:23] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-28 03:30:23] HOME_URL="https://www.centos.org/"
[2026-02-28 03:30:23] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-28 03:30:23] 
[2026-02-28 03:30:23] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-28 03:30:23] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-28 03:30:23] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-28 03:30:23] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-28 03:30:23] 
[2026-02-28 03:30:23] 2026-02-28 02:29:40,680 | INFO     | **************************************
[2026-02-28 03:30:23] 2026-02-28 02:29:41,183 | INFO     | executing command: df -mP /var/lib/boinc/slots/16
[2026-02-28 03:30:23] 2026-02-28 02:29:41,203 | INFO     | sufficient remaining disk space (497820893184 B)
[2026-02-28 03:30:23] 2026-02-28 02:29:41,203 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-28 03:30:23] 2026-02-28 02:29:41,204 | INFO     | current server update state: UPDATING_FINAL
[2026-02-28 03:30:23] 2026-02-28 02:29:41,204 | INFO     | update_server=False
[2026-02-28 03:30:23] 2026-02-28 02:29:41,204 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-28 03:30:23] 2026-02-28 02:29:41,204 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-28 03:30:23] 2026-02-28 02:29:41,204 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-28 03:30:23] 2026-02-28 02:29:41,205 | INFO     | aborting loop
[2026-02-28 03:30:23] 2026-02-28 02:29:41,619 | INFO     | all data control threads have been joined
[2026-02-28 03:30:23] 2026-02-28 02:29:41,928 | INFO     | all job control threads have been joined
[2026-02-28 03:30:23] 2026-02-28 02:29:42,209 | INFO     | [job] retrieve thread has finished
[2026-02-28 03:30:23] 2026-02-28 02:29:42,210 | INFO     | [job] queue monitor thread has finished
[2026-02-28 03:30:23] 2026-02-28 02:29:42,211 | INFO     | [job] job monitor thread has finished
[2026-02-28 03:30:23] 2026-02-28 02:29:42,272 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-28 03:30:23] 2026-02-28 02:29:42,450 | INFO     | [payload] validate_pre thread has finished
[2026-02-28 03:30:23] 2026-02-28 02:29:42,613 | INFO     | [payload] execute_payloads thread has finished
[2026-02-28 03:30:23] 2026-02-28 02:29:42,625 | INFO     | [data] control thread has finished
[2026-02-28 03:30:23] 2026-02-28 02:29:42,683 | INFO     | all payload control threads have been joined
[2026-02-28 03:30:23] 2026-02-28 02:29:42,863 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-28 03:30:23] 2026-02-28 02:29:42,933 | INFO     | [job] control thread has finished
[2026-02-28 03:30:23] 2026-02-28 02:29:42,970 | INFO     | [payload] failed_post thread has finished
[2026-02-28 03:30:23] 2026-02-28 02:29:43,297 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-28 03:30:23] 2026-02-28 02:29:43,324 | INFO     | [payload] validate_post thread has finished
[2026-02-28 03:30:23] 2026-02-28 02:29:43,327 | INFO     | [job] create_data_payload thread has finished
[2026-02-28 03:30:23] 2026-02-28 02:29:43,589 | INFO     | [data] copytool_in thread has finished
[2026-02-28 03:30:23] 2026-02-28 02:29:43,680 | INFO     | [job] validate thread has finished
[2026-02-28 03:30:23] 2026-02-28 02:29:43,689 | INFO     | [payload] control thread has finished
[2026-02-28 03:30:23] 2026-02-28 02:29:44,278 | INFO     | [data] copytool_out thread has finished
[2026-02-28 03:30:23] 2026-02-28 02:29:46,865 | INFO     | [data] queue_monitor thread has finished
[2026-02-28 03:30:23] 2026-02-28 02:30:11,638 | INFO     | PID=6985 has CPU usage=4.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-02-28 03:30:23] 2026-02-28 02:30:11,639 | INFO     | found 0 job(s) in 20 queues
[2026-02-28 03:30:23] 2026-02-28 02:30:11,639 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-28 03:30:23] 2026-02-28 02:30:11,640 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-28 03:30:23] 2026-02-28 02:30:16,654 | INFO     | [monitor] cgroup control has ended
[2026-02-28 03:30:23] 2026-02-28 02:30:18,313 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140571522344768)>', '<ExcThread(monitor, started 140570613753600)>']
[2026-02-28 03:30:23] 2026-02-28 02:30:18,672 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-28 03:30:23] 2026-02-28 02:30:18,673 | INFO     | [monitor] control thread has ended
[2026-02-28 03:30:23] 2026-02-28 02:30:23,338 | INFO     | all workflow threads have been joined
[2026-02-28 03:30:23] 2026-02-28 02:30:23,339 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-28 03:30:23] 2026-02-28 02:30:23,339 | INFO     | traces error code: 0
[2026-02-28 03:30:23] 2026-02-28 02:30:23,339 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-28 03:30:23] 2026-02-28 02:30:23,489 [wrapper] ==== pilot stdout END ====
[2026-02-28 03:30:23] 2026-02-28 02:30:23,493 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-28 03:30:23] 2026-02-28 02:30:23,496 [wrapper] pilotpid: 6985
[2026-02-28 03:30:23] 2026-02-28 02:30:23,499 [wrapper] Pilot exit status: 0
[2026-02-28 03:30:23] 2026-02-28 02:30:23,517 [wrapper] pandaids: 7031187316
[2026-02-28 03:30:23] 2026-02-28 02:30:23,550 [wrapper] cleanup supervisor_pilot 17976 6986
[2026-02-28 03:30:23] 2026-02-28 02:30:23,555 [wrapper] Test setup, not cleaning
[2026-02-28 03:30:23] 2026-02-28 02:30:23,562 [wrapper] apfmon messages muted
[2026-02-28 03:30:23] 2026-02-28 02:30:23,571 [wrapper] ==== wrapper stdout END ====
[2026-02-28 03:30:23] 2026-02-28 02:30:23,576 [wrapper] ==== wrapper stderr END ====
[2026-02-28 03:30:23]  *** Error codes and diagnostics ***
[2026-02-28 03:30:23]     "exeErrorCode": 0,
[2026-02-28 03:30:23]     "exeErrorDiag": "",
[2026-02-28 03:30:23]     "pilotErrorCode": 0,
[2026-02-28 03:30:23]     "pilotErrorDiag": "",
[2026-02-28 03:30:23]  *** Listing of results directory ***
[2026-02-28 03:30:23] total 403628
[2026-02-28 03:30:23] -rw-r--r--. 1 boinc boinc    584627 Feb 27 05:02 pilot3.tar.gz
[2026-02-28 03:30:23] -rwx------. 1 boinc boinc     36322 Feb 27 05:03 runpilot2-wrapper.sh
[2026-02-28 03:30:23] -rw-r--r--. 1 boinc boinc      5111 Feb 27 05:03 queuedata.json
[2026-02-28 03:30:23] -rw-r--r--. 1 boinc boinc       100 Feb 27 20:26 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-28 03:30:23] -rwxr-xr-x. 1 boinc boinc      7986 Feb 27 20:26 run_atlas
[2026-02-28 03:30:23] -rw-r--r--. 1 boinc boinc       105 Feb 27 20:26 job.xml
[2026-02-28 03:30:23] -rw-r--r--. 2 boinc boinc 229506327 Feb 27 20:26 EVNT.48447738._000003.pool.root.1
[2026-02-28 03:30:23] -rw-r--r--. 2 boinc boinc     15845 Feb 27 20:26 start_atlas.sh
[2026-02-28 03:30:23] drwxrwx--x. 2 boinc boinc        68 Feb 27 20:26 shared
[2026-02-28 03:30:23] -rw-r--r--. 2 boinc boinc    597973 Feb 27 20:26 input.tar.gz
[2026-02-28 03:30:23] -rw-r--r--. 1 boinc boinc      6392 Feb 27 20:26 init_data.xml
[2026-02-28 03:30:23] -rw-r--r--. 1 boinc boinc         0 Feb 27 20:26 boinc_lockfile
[2026-02-28 03:30:23] -rw-r--r--. 1 boinc boinc      2607 Feb 27 20:27 pandaJob.out
[2026-02-28 03:30:23] -rw-------. 1 boinc boinc    998790 Feb 27 20:28 agis_schedconf.cvmfs.json
[2026-02-28 03:30:23] -rw-------. 1 boinc boinc       415 Feb 27 20:28 workernode_map.json
[2026-02-28 03:30:23] drwx------. 5 boinc boinc      4096 Feb 27 20:28 pilot3
[2026-02-28 03:30:23] -rw-------. 1 boinc boinc 171770333 Feb 28 03:23 HITS.48842356._000055.pool.root.1
[2026-02-28 03:30:23] -rw-r--r--. 1 boinc boinc       531 Feb 28 03:28 boinc_task_state.xml
[2026-02-28 03:30:23] -rw-------. 1 boinc boinc      1012 Feb 28 03:29 memory_monitor_summary.json
[2026-02-28 03:30:23] -rw-------. 1 boinc boinc   1513015 Feb 28 03:29 agis_ddmendpoints.agis.ALL.json
[2026-02-28 03:30:23] -rw-------. 1 boinc boinc    598951 Feb 28 03:29 log.48842356._000055.job.log.tgz.1
[2026-02-28 03:30:23] -rw-------. 1 boinc boinc      6303 Feb 28 03:29 heartbeat.json
[2026-02-28 03:30:23] -rw-r--r--. 1 boinc boinc      8192 Feb 28 03:29 boinc_mmap_file
[2026-02-28 03:30:23] -rw-r--r--. 1 boinc boinc        29 Feb 28 03:29 wrapper_checkpoint.txt
[2026-02-28 03:30:23] -rw-------. 1 boinc boinc        95 Feb 28 03:30 pilot_heartbeat.json
[2026-02-28 03:30:23] -rw-------. 1 boinc boinc      4805 Feb 28 03:30 pilotlog.txt
[2026-02-28 03:30:23] -rw-------. 1 boinc boinc   3463264 Feb 28 03:30 log.48842356._000055.job.log.1
[2026-02-28 03:30:23] -rw-------. 1 boinc boinc       357 Feb 28 03:30 output.list
[2026-02-28 03:30:23] -rw-r--r--. 1 boinc boinc       620 Feb 28 03:30 runtime_log
[2026-02-28 03:30:23] -rw-------. 1 boinc boinc   4075520 Feb 28 03:30 result.tar.gz
[2026-02-28 03:30:23] -rw-r--r--. 1 boinc boinc      8832 Feb 28 03:30 runtime_log.err
[2026-02-28 03:30:23] -rw-------. 1 boinc boinc       657 Feb 28 03:30 iScMDmQF4F9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmsI4KDm82Ak8m.diag
[2026-02-28 03:30:23] -rw-r--r--. 1 boinc boinc     20982 Feb 28 03:30 stderr.txt
[2026-02-28 03:30:23] HITS file was successfully produced:
[2026-02-28 03:30:23] -rw-------. 1 boinc boinc 171770333 Feb 28 03:23 shared/HITS.pool.root.1
[2026-02-28 03:30:23]  *** Contents of shared directory: ***
[2026-02-28 03:30:23] total 396456
[2026-02-28 03:30:23] -rw-r--r--. 2 boinc boinc 229506327 Feb 27 20:26 ATLAS.root_0
[2026-02-28 03:30:23] -rw-r--r--. 2 boinc boinc     15845 Feb 27 20:26 start_atlas.sh
[2026-02-28 03:30:23] -rw-r--r--. 2 boinc boinc    597973 Feb 27 20:26 input.tar.gz
[2026-02-28 03:30:23] -rw-------. 1 boinc boinc 171770333 Feb 28 03:23 HITS.pool.root.1
[2026-02-28 03:30:23] -rw-------. 1 boinc boinc   4075520 Feb 28 03:30 result.tar.gz
03:30:25 (2931): run_atlas exited; CPU time 192217.809045
03:30:25 (2931): called boinc_finish(0)

</stderr_txt>
]]>

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