Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
13:19:32 (23938): wrapper (7.7.26015): starting
13:19:32 (23938): wrapper: running run_atlas (--nthreads 8)
[2026-02-27 13:19:32] Arguments: --nthreads 8
[2026-02-27 13:19:32] Threads: 8
[2026-02-27 13:19:32] Checking for CVMFS
[2026-02-27 13:19:33] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-27 13:19:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-27 13:19:35] Running cvmfs_config stat atlas.cern.ch
[2026-02-27 13:19:36] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-27 13:19:36] 2.11.2.0 18344 105949 107316 156695 0 87 15926860 25165824 4456 130560 0 29968076 99.805 29525726 3473 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-02-27 13:19:36] CVMFS is ok
[2026-02-27 13:19:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-27 13:19:36] Checking for apptainer binary...
[2026-02-27 13:19:36] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-27 13:19:36] Running /usr/bin/apptainer --version
[2026-02-27 13:19:36] apptainer version 1.3.2-1.el7
[2026-02-27 13:19:36] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-27 13:19:57] cg-vwn430.simple-grid.lan
[2026-02-27 13:19:57] apptainer works
[2026-02-27 13:19:57] Set ATHENA_PROC_NUMBER=8
[2026-02-27 13:19:57] Set ATHENA_CORE_NUMBER=8
[2026-02-27 13:19:57] Starting ATLAS job with PandaID=7030888311
[2026-02-27 13:19:57] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-27 16:38:11]  *** The last 200 lines of the pilot log: ***
[2026-02-27 16:38:11] 2026-02-27 15:37:28,580 | INFO     | job 7030888311 has finished - writing final server update
[2026-02-27 16:38:11] 2026-02-27 15:37:28,581 | INFO     | total number of processed events: 400 (read)
[2026-02-27 16:38:11] 2026-02-27 15:37:28,583 | INFO     | using path: /var/lib/boinc/slots/6/PanDA_Pilot-7030888311/memory_monitor_summary.json (trf name=prmon)
[2026-02-27 16:38:11] 2026-02-27 15:37:28,583 | INFO     | extracted standard info from prmon json
[2026-02-27 16:38:11] 2026-02-27 15:37:28,584 | INFO     | extracted standard memory fields from prmon json
[2026-02-27 16:38:11] 2026-02-27 15:37:28,584 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-27 16:38:11] 2026-02-27 15:37:28,584 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-27 16:38:11] 2026-02-27 15:37:28,584 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-27 16:38:11] 2026-02-27 15:37:28,588 | INFO     | fitting pss+swap vs Time
[2026-02-27 16:38:11] 2026-02-27 15:37:28,588 | INFO     | sum of square deviations: 1995283922.5
[2026-02-27 16:38:11] 2026-02-27 15:37:28,590 | INFO     | sum of deviations: 43592316051.99999
[2026-02-27 16:38:11] 2026-02-27 15:37:28,590 | INFO     | mean x: 1772200982.5
[2026-02-27 16:38:11] 2026-02-27 15:37:28,590 | INFO     | mean y: 2485828.569892473
[2026-02-27 16:38:11] 2026-02-27 15:37:28,590 | INFO     | intersect: -38715986497.91923
[2026-02-27 16:38:11] 2026-02-27 15:37:28,590 | INFO     | chi2: 6.4012973737301655
[2026-02-27 16:38:11] 2026-02-27 15:37:28,591 | INFO     | sum of square deviations: 1838657730.0
[2026-02-27 16:38:11] 2026-02-27 15:37:28,592 | INFO     | sum of deviations: 54945761224.00001
[2026-02-27 16:38:11] 2026-02-27 15:37:28,593 | INFO     | mean x: 1772200830.0
[2026-02-27 16:38:11] 2026-02-27 15:37:28,593 | INFO     | mean y: 2496618.6685082875
[2026-02-27 16:38:11] 2026-02-27 15:37:28,593 | INFO     | intersect: -52957291414.3955
[2026-02-27 16:38:11] 2026-02-27 15:37:28,593 | INFO     | chi2: 5.7009641136721
[2026-02-27 16:38:11] 2026-02-27 15:37:28,594 | INFO     | current chi2=5.7009641136721 (change=10.94048939098055 %)
[2026-02-27 16:38:11] 2026-02-27 15:37:28,594 | INFO     | right removable region: 180
[2026-02-27 16:38:11] 2026-02-27 15:37:28,594 | INFO     | sum of square deviations: 1838657730.0
[2026-02-27 16:38:11] 2026-02-27 15:37:28,596 | INFO     | sum of deviations: -19421367819.000004
[2026-02-27 16:38:11] 2026-02-27 15:37:28,596 | INFO     | mean x: 1772201135.0
[2026-02-27 16:38:11] 2026-02-27 15:37:28,596 | INFO     | mean y: 2547107.7569060773
[2026-02-27 16:38:11] 2026-02-27 15:37:28,596 | INFO     | intersect: 18721947423.814796
[2026-02-27 16:38:11] 2026-02-27 15:37:28,597 | INFO     | chi2: 1.8684620136268637
[2026-02-27 16:38:11] 2026-02-27 15:37:28,597 | INFO     | current chi2=1.8684620136268637 (change=70.8111980347185 %)
[2026-02-27 16:38:11] 2026-02-27 15:37:28,597 | INFO     | sum of square deviations: 1690450300.0
[2026-02-27 16:38:11] 2026-02-27 15:37:28,598 | INFO     | sum of deviations: -42764189293.5
[2026-02-27 16:38:11] 2026-02-27 15:37:28,599 | INFO     | mean x: 1772201287.5
[2026-02-27 16:38:11] 2026-02-27 15:37:28,599 | INFO     | mean y: 2570884.903409091
[2026-02-27 16:38:11] 2026-02-27 15:37:28,599 | INFO     | intersect: 44834856888.71814
[2026-02-27 16:38:11] 2026-02-27 15:37:28,599 | INFO     | chi2: 0.9831939453443472
[2026-02-27 16:38:11] 2026-02-27 15:37:28,599 | INFO     | current chi2=0.9831939453443472 (change=47.37950580885112 %)
[2026-02-27 16:38:11] 2026-02-27 15:37:28,600 | INFO     | sum of square deviations: 1550429070.0
[2026-02-27 16:38:11] 2026-02-27 15:37:28,601 | INFO     | sum of deviations: -43727487599.00001
[2026-02-27 16:38:11] 2026-02-27 15:37:28,601 | INFO     | mean x: 1772201440.0
[2026-02-27 16:38:11] 2026-02-27 15:37:28,601 | INFO     | mean y: 2571875.356725146
[2026-02-27 16:38:11] 2026-02-27 15:37:28,602 | INFO     | intersect: 49984810979.35518
[2026-02-27 16:38:11] 2026-02-27 15:37:28,602 | INFO     | chi2: 0.9535521629225583
[2026-02-27 16:38:11] 2026-02-27 15:37:28,602 | INFO     | current chi2=0.9535521629225583 (change=3.014845907274928 %)
[2026-02-27 16:38:11] 2026-02-27 15:37:28,602 | INFO     | left removable region: 30
[2026-02-27 16:38:11] 2026-02-27 15:37:28,603 | INFO     | sum of square deviations: 1046484737.5
[2026-02-27 16:38:11] 2026-02-27 15:37:28,604 | INFO     | sum of deviations: -17098456434.500002
[2026-02-27 16:38:11] 2026-02-27 15:37:28,604 | INFO     | mean x: 1772201714.5
[2026-02-27 16:38:11] 2026-02-27 15:37:28,604 | INFO     | mean y: 2568231.34
[2026-02-27 16:38:11] 2026-02-27 15:37:28,604 | INFO     | intersect: 28958474345.09205
[2026-02-27 16:38:11] 2026-02-27 15:37:28,604 | INFO     | chi2: 0.13896715239224458
[2026-02-27 16:38:11] 2026-02-27 15:37:28,605 | INFO     | current memory leak: -16.34 B/s (using 150 data points, chi2=0.14)
[2026-02-27 16:38:11] 2026-02-27 15:37:28,606 | INFO     | could have reported an average CPU frequency of 1999 MHz (10 samples)
[2026-02-27 16:38:11] 2026-02-27 15:37:28,606 | INFO     | ..............................
[2026-02-27 16:38:11] 2026-02-27 15:37:28,606 | INFO     | . Timing measurements:
[2026-02-27 16:38:11] 2026-02-27 15:37:28,606 | INFO     | . get job = 0 s
[2026-02-27 16:38:11] 2026-02-27 15:37:28,606 | INFO     | . initial setup = 84 s
[2026-02-27 16:38:11] 2026-02-27 15:37:28,607 | INFO     | . payload setup = 130 s
[2026-02-27 16:38:11] 2026-02-27 15:37:28,607 | INFO     | . stage-in = 0 s
[2026-02-27 16:38:11] 2026-02-27 15:37:28,607 | INFO     | . payload execution = 11422 s
[2026-02-27 16:38:11] 2026-02-27 15:37:28,607 | INFO     | . stage-out = 1 s
[2026-02-27 16:38:11] 2026-02-27 15:37:28,607 | INFO     | . log creation = 0 s
[2026-02-27 16:38:11] 2026-02-27 15:37:28,607 | INFO     | ..............................
[2026-02-27 16:38:11] 2026-02-27 15:37:29,074 | INFO     | 
[2026-02-27 16:38:11] 2026-02-27 15:37:29,074 | INFO     | job summary report
[2026-02-27 16:38:11] 2026-02-27 15:37:29,075 | INFO     | --------------------------------------------------
[2026-02-27 16:38:11] 2026-02-27 15:37:29,075 | INFO     | PanDA job id: 7030888311
[2026-02-27 16:38:11] 2026-02-27 15:37:29,075 | INFO     | task id: 48842761
[2026-02-27 16:38:11] 2026-02-27 15:37:29,075 | INFO     | errors: (none)
[2026-02-27 16:38:11] 2026-02-27 15:37:29,075 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-27 16:38:11] 2026-02-27 15:37:29,075 | INFO     | pilot state: finished 
[2026-02-27 16:38:11] 2026-02-27 15:37:29,076 | INFO     | transexitcode: 0
[2026-02-27 16:38:11] 2026-02-27 15:37:29,076 | INFO     | exeerrorcode: 0
[2026-02-27 16:38:11] 2026-02-27 15:37:29,076 | INFO     | exeerrordiag: 
[2026-02-27 16:38:11] 2026-02-27 15:37:29,076 | INFO     | exitcode: 0
[2026-02-27 16:38:11] 2026-02-27 15:37:29,076 | INFO     | exitmsg: OK
[2026-02-27 16:38:11] 2026-02-27 15:37:29,076 | INFO     | cpuconsumptiontime: 63085 s
[2026-02-27 16:38:11] 2026-02-27 15:37:29,076 | INFO     | nevents: 400
[2026-02-27 16:38:11] 2026-02-27 15:37:29,076 | INFO     | neventsw: 0
[2026-02-27 16:38:11] 2026-02-27 15:37:29,076 | INFO     | pid: 32646
[2026-02-27 16:38:11] 2026-02-27 15:37:29,077 | INFO     | pgrp: 32646
[2026-02-27 16:38:11] 2026-02-27 15:37:29,077 | INFO     | corecount: 8
[2026-02-27 16:38:11] 2026-02-27 15:37:29,077 | INFO     | event service: False
[2026-02-27 16:38:11] 2026-02-27 15:37:29,077 | INFO     | sizes: {0: 2287315, 1: 2287776, 11556: 2317081, 11559: 2326135, 11561: 2326273}
[2026-02-27 16:38:11] 2026-02-27 15:37:29,077 | INFO     | --------------------------------------------------
[2026-02-27 16:38:11] 2026-02-27 15:37:29,077 | INFO     | 
[2026-02-27 16:38:11] 2026-02-27 15:37:29,077 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2026-02-27 16:38:11] 2026-02-27 15:37:29,105 | INFO     | time since job start (11563s) is within the limit (349056.0s)
[2026-02-27 16:38:11] 2026-02-27 15:37:29,108 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-27 16:38:11] 2026-02-27 15:37:29,109 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-27 16:38:11] 2026-02-27 15:37:29,109 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-27 16:38:11] 2026-02-27 15:37:29,109 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-27 16:38:11] 2026-02-27 15:37:29,109 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-27 16:38:11] 2026-02-27 15:37:29,109 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-27 16:38:11] 2026-02-27 15:37:29,109 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-27 16:38:11] 2026-02-27 15:37:29,109 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-27 16:38:11] 2026-02-27 15:37:29,109 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-27 16:38:11] 2026-02-27 15:37:29,110 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-27 16:38:11] 2026-02-27 15:37:29,110 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-27 16:38:11] 2026-02-27 15:37:29,110 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-27 16:38:11] 2026-02-27 15:37:29,110 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-27 16:38:11] 2026-02-27 15:37:29,110 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-27 16:38:11] 2026-02-27 15:37:29,110 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-27 16:38:11] 2026-02-27 15:37:29,110 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-27 16:38:11] 2026-02-27 15:37:29,110 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-27 16:38:11] 2026-02-27 15:37:29,110 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-27 16:38:11] 2026-02-27 15:37:29,111 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-27 16:38:11] 2026-02-27 15:37:29,111 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-27 16:38:11] 2026-02-27 15:37:29,111 | INFO     | job 7030888311 has completed (purged errors)
[2026-02-27 16:38:11] 2026-02-27 15:37:29,111 | INFO     | overall cleanup function is called
[2026-02-27 16:38:11] 2026-02-27 15:37:30,119 | INFO     | --- collectZombieJob: --- 10, [32646]
[2026-02-27 16:38:11] 2026-02-27 15:37:30,120 | INFO     | zombie collector waiting for pid 32646
[2026-02-27 16:38:11] 2026-02-27 15:37:30,120 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-27 16:38:11] 2026-02-27 15:37:30,120 | INFO     | collected zombie processes
[2026-02-27 16:38:11] 2026-02-27 15:37:30,120 | INFO     | will attempt to kill all subprocesses of pid=32646
[2026-02-27 16:38:11] 2026-02-27 15:37:30,182 | INFO     | process IDs to be killed: [32646] (in reverse order)
[2026-02-27 16:38:11] 2026-02-27 15:37:30,236 | WARNING  | found no corresponding commands to process id(s)
[2026-02-27 16:38:11] 2026-02-27 15:37:30,236 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-27 16:38:11] 2026-02-27 15:37:30,238 | INFO     | did not find any defunct processes belonging to 32646
[2026-02-27 16:38:11] 2026-02-27 15:37:30,240 | INFO     | did not find any defunct processes belonging to 32646
[2026-02-27 16:38:11] 2026-02-27 15:37:30,240 | INFO     | ready for new job
[2026-02-27 16:38:11] 2026-02-27 15:37:30,240 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-27 16:38:11] 2026-02-27 15:37:30,242 | INFO     | **************************************
[2026-02-27 16:38:11] 2026-02-27 15:37:30,243 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-27 16:38:11] 2026-02-27 15:37:30,243 | INFO     | **************************************
[2026-02-27 16:38:11] 2026-02-27 15:37:30,243 | INFO     | 
[2026-02-27 16:38:11] 2026-02-27 15:37:30,243 | INFO     | pilot is running in a VM
[2026-02-27 16:38:11] 2026-02-27 15:37:30,244 | INFO     | architecture information:
[2026-02-27 16:38:11] 2026-02-27 15:37:30,244 | INFO     | executing command: cat /etc/os-release
[2026-02-27 16:38:11] 2026-02-27 15:37:30,263 | INFO     | cat /etc/os-release:
[2026-02-27 16:38:11] NAME="CentOS Linux"
[2026-02-27 16:38:11] VERSION="7 (Core)"
[2026-02-27 16:38:11] ID="centos"
[2026-02-27 16:38:11] ID_LIKE="rhel fedora"
[2026-02-27 16:38:11] VERSION_ID="7"
[2026-02-27 16:38:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-27 16:38:11] ANSI_COLOR="0;31"
[2026-02-27 16:38:11] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-27 16:38:11] HOME_URL="https://www.centos.org/"
[2026-02-27 16:38:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-27 16:38:11] 
[2026-02-27 16:38:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-27 16:38:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-27 16:38:11] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-27 16:38:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-27 16:38:11] 
[2026-02-27 16:38:11] 2026-02-27 15:37:30,264 | INFO     | **************************************
[2026-02-27 16:38:11] 2026-02-27 15:37:30,767 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2026-02-27 16:38:11] 2026-02-27 15:37:30,792 | INFO     | sufficient remaining disk space (497707646976 B)
[2026-02-27 16:38:11] 2026-02-27 15:37:30,792 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-27 16:38:11] 2026-02-27 15:37:30,792 | INFO     | current server update state: UPDATING_FINAL
[2026-02-27 16:38:11] 2026-02-27 15:37:30,793 | INFO     | update_server=False
[2026-02-27 16:38:11] 2026-02-27 15:37:30,793 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-27 16:38:11] 2026-02-27 15:37:30,793 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-02-27 16:38:11] 2026-02-27 15:37:30,794 | INFO     | found 0 job(s) in 20 queues
[2026-02-27 16:38:11] 2026-02-27 15:37:30,794 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-27 16:38:11] 2026-02-27 15:37:30,794 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-27 16:38:11] 2026-02-27 15:37:31,116 | INFO     | all data control threads have been joined
[2026-02-27 16:38:11] 2026-02-27 15:37:31,503 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-27 16:38:11] 2026-02-27 15:37:31,503 | INFO     | aborting loop
[2026-02-27 16:38:11] 2026-02-27 15:37:31,726 | INFO     | all job control threads have been joined
[2026-02-27 16:38:11] 2026-02-27 15:37:31,798 | INFO     | [job] retrieve thread has finished
[2026-02-27 16:38:11] 2026-02-27 15:37:32,117 | INFO     | [data] control thread has finished
[2026-02-27 16:38:11] 2026-02-27 15:37:32,125 | INFO     | [payload] failed_post thread has finished
[2026-02-27 16:38:11] 2026-02-27 15:37:32,133 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-27 16:38:11] 2026-02-27 15:37:32,235 | INFO     | all payload control threads have been joined
[2026-02-27 16:38:11] 2026-02-27 15:37:32,503 | INFO     | [payload] execute_payloads thread has finished
[2026-02-27 16:38:11] 2026-02-27 15:37:32,508 | INFO     | [job] job monitor thread has finished
[2026-02-27 16:38:11] 2026-02-27 15:37:32,583 | INFO     | [data] copytool_in thread has finished
[2026-02-27 16:38:11] 2026-02-27 15:37:32,605 | INFO     | [job] create_data_payload thread has finished
[2026-02-27 16:38:11] 2026-02-27 15:37:32,732 | INFO     | [job] control thread has finished
[2026-02-27 16:38:11] 2026-02-27 15:37:32,745 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-27 16:38:11] 2026-02-27 15:37:32,842 | INFO     | [payload] validate_pre thread has finished
[2026-02-27 16:38:11] 2026-02-27 15:37:32,896 | INFO     | [job] validate thread has finished
[2026-02-27 16:38:11] 2026-02-27 15:37:33,101 | INFO     | [payload] validate_post thread has finished
[2026-02-27 16:38:11] 2026-02-27 15:37:33,240 | INFO     | [payload] control thread has finished
[2026-02-27 16:38:11] 2026-02-27 15:37:33,734 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-27 16:38:11] 2026-02-27 15:37:34,139 | INFO     | [data] copytool_out thread has finished
[2026-02-27 16:38:11] 2026-02-27 15:37:34,740 | INFO     | [job] queue monitor thread has finished
[2026-02-27 16:38:11] 2026-02-27 15:37:36,751 | INFO     | [data] queue_monitor thread has finished
[2026-02-27 16:38:11] 2026-02-27 15:37:41,631 | INFO     | job.realtimelogging is not enabled
[2026-02-27 16:38:11] 2026-02-27 15:37:42,636 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-27 16:38:11] 2026-02-27 15:38:05,324 | INFO     | [monitor] cgroup control has ended
[2026-02-27 16:38:11] 2026-02-27 15:38:06,042 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140604622288704)>', '<ExcThread(monitor, started 140603589383936)>']
[2026-02-27 16:38:11] 2026-02-27 15:38:06,908 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-27 16:38:11] 2026-02-27 15:38:06,909 | INFO     | [monitor] control thread has ended
[2026-02-27 16:38:11] 2026-02-27 15:38:11,067 | INFO     | all workflow threads have been joined
[2026-02-27 16:38:11] 2026-02-27 15:38:11,068 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-27 16:38:11] 2026-02-27 15:38:11,068 | INFO     | traces error code: 0
[2026-02-27 16:38:11] 2026-02-27 15:38:11,068 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-27 16:38:11] 2026-02-27 15:38:11,208 [wrapper] ==== pilot stdout END ====
[2026-02-27 16:38:11] 2026-02-27 15:38:11,213 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-27 16:38:11] 2026-02-27 15:38:11,217 [wrapper] pilotpid: 28103
[2026-02-27 16:38:11] 2026-02-27 15:38:11,224 [wrapper] Pilot exit status: 0
[2026-02-27 16:38:11] 2026-02-27 15:38:11,242 [wrapper] pandaids: 7030888311
[2026-02-27 16:38:11] 2026-02-27 15:38:11,274 [wrapper] cleanup supervisor_pilot  7188 28104
[2026-02-27 16:38:11] 2026-02-27 15:38:11,278 [wrapper] Test setup, not cleaning
[2026-02-27 16:38:11] 2026-02-27 15:38:11,290 [wrapper] apfmon messages muted
[2026-02-27 16:38:11] 2026-02-27 15:38:11,294 [wrapper] ==== wrapper stdout END ====
[2026-02-27 16:38:11] 2026-02-27 15:38:11,297 [wrapper] ==== wrapper stderr END ====
[2026-02-27 16:38:11]  *** Error codes and diagnostics ***
[2026-02-27 16:38:11]     "exeErrorCode": 0,
[2026-02-27 16:38:11]     "exeErrorDiag": "",
[2026-02-27 16:38:11]     "pilotErrorCode": 0,
[2026-02-27 16:38:11]     "pilotErrorDiag": "",
[2026-02-27 16:38:11]  *** Listing of results directory ***
[2026-02-27 16:38:11] total 488732
[2026-02-27 16:38:11] -rw-r--r--. 1 boinc boinc    584627 Feb 26 20:44 pilot3.tar.gz
[2026-02-27 16:38:11] -rwx------. 1 boinc boinc     36322 Feb 26 20:46 runpilot2-wrapper.sh
[2026-02-27 16:38:11] -rw-r--r--. 1 boinc boinc      5111 Feb 26 20:48 queuedata.json
[2026-02-27 16:38:11] -rw-r--r--. 1 boinc boinc       100 Feb 27 13:19 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-27 16:38:11] -rwxr-xr-x. 1 boinc boinc      7986 Feb 27 13:19 run_atlas
[2026-02-27 16:38:11] -rw-r--r--. 1 boinc boinc       105 Feb 27 13:19 job.xml
[2026-02-27 16:38:11] -rw-r--r--. 1 boinc boinc      6390 Feb 27 13:19 init_data.xml
[2026-02-27 16:38:11] -rw-r--r--. 2 boinc boinc 283554920 Feb 27 13:19 EVNT.48449210._000003.pool.root.1
[2026-02-27 16:38:11] -rw-r--r--. 2 boinc boinc     15845 Feb 27 13:19 start_atlas.sh
[2026-02-27 16:38:11] drwxrwx--x. 2 boinc boinc        68 Feb 27 13:19 shared
[2026-02-27 16:38:11] -rw-r--r--. 2 boinc boinc    597959 Feb 27 13:19 input.tar.gz
[2026-02-27 16:38:11] -rw-r--r--. 1 boinc boinc         0 Feb 27 13:19 boinc_lockfile
[2026-02-27 16:38:11] -rw-r--r--. 1 boinc boinc      2597 Feb 27 13:19 pandaJob.out
[2026-02-27 16:38:11] -rw-------. 1 boinc boinc       415 Feb 27 13:24 workernode_map.json
[2026-02-27 16:38:11] -rw-------. 1 boinc boinc    998473 Feb 27 13:24 agis_schedconf.cvmfs.json
[2026-02-27 16:38:11] drwx------. 5 boinc boinc      4096 Feb 27 13:24 pilot3
[2026-02-27 16:38:11] -rw-------. 1 boinc boinc 208908365 Feb 27 16:36 HITS.48842761._000060.pool.root.1
[2026-02-27 16:38:11] -rw-r--r--. 1 boinc boinc       531 Feb 27 16:36 boinc_task_state.xml
[2026-02-27 16:38:11] -rw-------. 1 boinc boinc        95 Feb 27 16:37 pilot_heartbeat.json
[2026-02-27 16:38:11] -rw-------. 1 boinc boinc      1013 Feb 27 16:37 memory_monitor_summary.json
[2026-02-27 16:38:11] -rw-------. 1 boinc boinc   1516111 Feb 27 16:37 agis_ddmendpoints.agis.ALL.json
[2026-02-27 16:38:11] -rw-------. 1 boinc boinc    418965 Feb 27 16:37 log.48842761._000060.job.log.tgz.1
[2026-02-27 16:38:11] -rw-------. 1 boinc boinc      6310 Feb 27 16:37 heartbeat.json
[2026-02-27 16:38:11] -rw-r--r--. 1 boinc boinc      8192 Feb 27 16:37 boinc_mmap_file
[2026-02-27 16:38:11] -rw-r--r--. 1 boinc boinc        28 Feb 27 16:37 wrapper_checkpoint.txt
[2026-02-27 16:38:11] -rw-------. 1 boinc boinc      4683 Feb 27 16:38 pilotlog.txt
[2026-02-27 16:38:11] -rw-------. 1 boinc boinc   1617511 Feb 27 16:38 log.48842761._000060.job.log.1
[2026-02-27 16:38:11] -rw-------. 1 boinc boinc       357 Feb 27 16:38 output.list
[2026-02-27 16:38:11] -rw-r--r--. 1 boinc boinc       620 Feb 27 16:38 runtime_log
[2026-02-27 16:38:11] -rw-------. 1 boinc boinc   2058240 Feb 27 16:38 result.tar.gz
[2026-02-27 16:38:11] -rw-r--r--. 1 boinc boinc      8816 Feb 27 16:38 runtime_log.err
[2026-02-27 16:38:11] -rw-------. 1 boinc boinc       654 Feb 27 16:38 NLELDmWUwF9n9Rq4apOajLDm4fhM0noT9bVooX4SDm2k1KDmL4DGbn.diag
[2026-02-27 16:38:11] -rw-r--r--. 1 boinc boinc     20600 Feb 27 16:38 stderr.txt
[2026-02-27 16:38:11] HITS file was successfully produced:
[2026-02-27 16:38:11] -rw-------. 1 boinc boinc 208908365 Feb 27 16:36 shared/HITS.pool.root.1
[2026-02-27 16:38:11]  *** Contents of shared directory: ***
[2026-02-27 16:38:11] total 483540
[2026-02-27 16:38:11] -rw-r--r--. 2 boinc boinc 283554920 Feb 27 13:19 ATLAS.root_0
[2026-02-27 16:38:11] -rw-r--r--. 2 boinc boinc     15845 Feb 27 13:19 start_atlas.sh
[2026-02-27 16:38:11] -rw-r--r--. 2 boinc boinc    597959 Feb 27 13:19 input.tar.gz
[2026-02-27 16:38:11] -rw-------. 1 boinc boinc 208908365 Feb 27 16:36 HITS.pool.root.1
[2026-02-27 16:38:11] -rw-------. 1 boinc boinc   2058240 Feb 27 16:38 result.tar.gz
16:38:13 (23938): run_atlas exited; CPU time 63210.132138
16:38:13 (23938): called boinc_finish(0)

</stderr_txt>
]]>

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