Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
03:54:24 (1832437): wrapper (7.7.26015): starting
03:54:24 (1832437): wrapper: running run_atlas (--nthreads 4)
[2026-03-01 03:54:24] Arguments: --nthreads 4
[2026-03-01 03:54:24] Threads: 4
[2026-03-01 03:54:24] Checking for CVMFS
[2026-03-01 03:54:24] No cvmfs_config command found, will try listing directly
[2026-03-01 03:54:24] CVMFS is ok
[2026-03-01 03:54:24] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-01 03:54:24] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-01 03:54:24] Further information can be found at the LHC@home message board.
[2026-03-01 03:54:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-01 03:54:24] Checking for apptainer binary...
[2026-03-01 03:54:24] which: no apptainer in ((null))
[2026-03-01 03:54:24] apptainer is not installed, using version from CVMFS
[2026-03-01 03:54:24] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-01 03:54:24] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot108/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut11.grid.cesnet.cz
[2026-03-01 03:54:24] apptainer works
[2026-03-01 03:54:24] Set ATHENA_PROC_NUMBER=4
[2026-03-01 03:54:24] Set ATHENA_CORE_NUMBER=4
[2026-03-01 03:54:24] Starting ATLAS job with PandaID=7019603453
[2026-03-01 03:54:24] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot108/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-01 08:58:56]  *** The last 200 lines of the pilot log: ***
[2026-03-01 08:58:56] 2026-03-01 07:38:33,312 | INFO     | using path: /scratch/boinc/var/slot108/slots/0/PanDA_Pilot-7019603453/memory_monitor_summary.json (trf name=prmon)
[2026-03-01 08:58:56] 2026-03-01 07:38:33,313 | INFO     | extracted standard info from prmon json
[2026-03-01 08:58:56] 2026-03-01 07:38:33,313 | INFO     | extracted standard memory fields from prmon json
[2026-03-01 08:58:56] 2026-03-01 07:38:33,313 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-01 08:58:56] 2026-03-01 07:38:33,313 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-01 08:58:56] 2026-03-01 07:38:33,314 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-01 08:58:56] 2026-03-01 07:38:33,319 | INFO     | fitting pss+swap vs Time
[2026-03-01 08:58:56] 2026-03-01 07:38:33,319 | INFO     | sum of square deviations: 6734194555.9426565
[2026-03-01 08:58:56] 2026-03-01 07:38:33,322 | INFO     | sum of deviations: 33563360897.10756
[2026-03-01 08:58:56] 2026-03-01 07:38:33,322 | INFO     | mean x: 1772342197.0143368
[2026-03-01 08:58:56] 2026-03-01 07:38:33,322 | INFO     | mean y: 2353291.4731182796
[2026-03-01 08:58:56] 2026-03-01 07:38:33,322 | INFO     | intersect: -8831035809.094357
[2026-03-01 08:58:56] 2026-03-01 07:38:33,323 | INFO     | chi2: 2.146536985926389
[2026-03-01 08:58:56] 2026-03-01 07:38:33,323 | INFO     | sum of square deviations: 6378589108.441567
[2026-03-01 08:58:56] 2026-03-01 07:38:33,325 | INFO     | sum of deviations: 50758140102.28833
[2026-03-01 08:58:56] 2026-03-01 07:38:33,326 | INFO     | mean x: 1772342044.5145986
[2026-03-01 08:58:56] 2026-03-01 07:38:33,326 | INFO     | mean y: 2360553.302919708
[2026-03-01 08:58:56] 2026-03-01 07:38:33,326 | INFO     | intersect: -14101194994.050339
[2026-03-01 08:58:56] 2026-03-01 07:38:33,326 | INFO     | chi2: 1.3334816904782323
[2026-03-01 08:58:56] 2026-03-01 07:38:33,326 | INFO     | current chi2=1.3334816904782323 (change=37.87753487495877 %)
[2026-03-01 08:58:56] 2026-03-01 07:38:33,327 | INFO     | sum of square deviations: 6035728085.940541
[2026-03-01 08:58:56] 2026-03-01 07:38:33,329 | INFO     | sum of deviations: 49679756662.45722
[2026-03-01 08:58:56] 2026-03-01 07:38:33,329 | INFO     | mean x: 1772341892.01487
[2026-03-01 08:58:56] 2026-03-01 07:38:33,329 | INFO     | mean y: 2360073.635687732
[2026-03-01 08:58:56] 2026-03-01 07:38:33,329 | INFO     | intersect: -14585691718.007792
[2026-03-01 08:58:56] 2026-03-01 07:38:33,330 | INFO     | chi2: 1.3335594387491778
[2026-03-01 08:58:56] 2026-03-01 07:38:33,330 | INFO     | current chi2=1.3335594387491778 (change=-0.005830471576827515 %)
[2026-03-01 08:58:56] 2026-03-01 07:38:33,330 | INFO     | right removable region: 268
[2026-03-01 08:58:56] 2026-03-01 07:38:33,331 | INFO     | sum of square deviations: 6378586668.441567
[2026-03-01 08:58:56] 2026-03-01 07:38:33,333 | INFO     | sum of deviations: -3914605931.0583935
[2026-03-01 08:58:56] 2026-03-01 07:38:33,333 | INFO     | mean x: 1772342349.5145986
[2026-03-01 08:58:56] 2026-03-01 07:38:33,333 | INFO     | mean y: 2369225.01459854
[2026-03-01 08:58:56] 2026-03-01 07:38:33,333 | INFO     | intersect: 1090074422.7196147
[2026-03-01 08:58:56] 2026-03-01 07:38:33,333 | INFO     | chi2: 0.8332557675439106
[2026-03-01 08:58:56] 2026-03-01 07:38:33,334 | INFO     | current chi2=0.8332557675439106 (change=61.181392493719414 %)
[2026-03-01 08:58:56] 2026-03-01 07:38:33,334 | INFO     | sum of square deviations: 6035723205.940541
[2026-03-01 08:58:56] 2026-03-01 07:38:33,336 | INFO     | sum of deviations: -5951436379.133835
[2026-03-01 08:58:56] 2026-03-01 07:38:33,336 | INFO     | mean x: 1772342502.01487
[2026-03-01 08:58:56] 2026-03-01 07:38:33,337 | INFO     | mean y: 2370126.033457249
[2026-03-01 08:58:56] 2026-03-01 07:38:33,337 | INFO     | intersect: 1749962466.317507
[2026-03-01 08:58:56] 2026-03-01 07:38:33,337 | INFO     | chi2: 0.8310500764577614
[2026-03-01 08:58:56] 2026-03-01 07:38:33,337 | INFO     | current chi2=0.8310500764577614 (change=0.2647075690397755 %)
[2026-03-01 08:58:56] 2026-03-01 07:38:33,337 | INFO     | left removable region: 20
[2026-03-01 08:58:56] 2026-03-01 07:38:33,338 | INFO     | sum of square deviations: 4729622681.935515
[2026-03-01 08:58:56] 2026-03-01 07:38:33,340 | INFO     | sum of deviations: 7516297216.870967
[2026-03-01 08:58:56] 2026-03-01 07:38:33,340 | INFO     | mean x: 1772342471.516129
[2026-03-01 08:58:56] 2026-03-01 07:38:33,340 | INFO     | mean y: 2379535.7822580645
[2026-03-01 08:58:56] 2026-03-01 07:38:33,340 | INFO     | intersect: -2814219944.1042266
[2026-03-01 08:58:56] 2026-03-01 07:38:33,340 | INFO     | chi2: 0.0023214128517035338
[2026-03-01 08:58:56] 2026-03-01 07:38:33,340 | INFO     | current memory leak: 1.59 B/s (using 248 data points, chi2=0.00)
[2026-03-01 08:58:56] 2026-03-01 07:38:33,341 | INFO     | could have reported an average CPU frequency of 2791 MHz (13 samples)
[2026-03-01 08:58:56] 2026-03-01 07:38:33,341 | INFO     | ..............................
[2026-03-01 08:58:56] 2026-03-01 07:38:33,342 | INFO     | . Timing measurements:
[2026-03-01 08:58:56] 2026-03-01 07:38:33,342 | INFO     | . get job = 0 s
[2026-03-01 08:58:56] 2026-03-01 07:38:33,342 | INFO     | . initial setup = 9 s
[2026-03-01 08:58:56] 2026-03-01 07:38:33,342 | INFO     | . payload setup = 9 s
[2026-03-01 08:58:56] 2026-03-01 07:38:33,342 | INFO     | . stage-in = 0 s
[2026-03-01 08:58:56] 2026-03-01 07:38:33,342 | INFO     | . payload execution = 16995 s
[2026-03-01 08:58:56] 2026-03-01 07:38:33,342 | INFO     | . stage-out = 1 s
[2026-03-01 08:58:56] 2026-03-01 07:38:33,342 | INFO     | . log creation = 0 s
[2026-03-01 08:58:56] 2026-03-01 07:38:33,342 | INFO     | ..............................
[2026-03-01 08:58:56] 2026-03-01 07:38:33,446 | INFO     | 
[2026-03-01 08:58:56] 2026-03-01 07:38:33,447 | INFO     | job summary report
[2026-03-01 08:58:56] 2026-03-01 07:38:33,447 | INFO     | --------------------------------------------------
[2026-03-01 08:58:56] 2026-03-01 07:38:33,447 | INFO     | PanDA job id: 7019603453
[2026-03-01 08:58:56] 2026-03-01 07:38:33,447 | INFO     | task id: 48508763
[2026-03-01 08:58:56] 2026-03-01 07:38:33,447 | INFO     | errors: (none)
[2026-03-01 08:58:56] 2026-03-01 07:38:33,447 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-01 08:58:56] 2026-03-01 07:38:33,447 | INFO     | pilot state: finished 
[2026-03-01 08:58:56] 2026-03-01 07:38:33,448 | INFO     | transexitcode: 0
[2026-03-01 08:58:56] 2026-03-01 07:38:33,448 | INFO     | exeerrorcode: 0
[2026-03-01 08:58:56] 2026-03-01 07:38:33,451 | INFO     | exeerrordiag: 
[2026-03-01 08:58:56] 2026-03-01 07:38:33,451 | INFO     | exitcode: 0
[2026-03-01 08:58:56] 2026-03-01 07:38:33,451 | INFO     | exitmsg: OK
[2026-03-01 08:58:56] 2026-03-01 07:38:33,451 | INFO     | cpuconsumptiontime: 60014 s
[2026-03-01 08:58:56] 2026-03-01 07:38:33,451 | INFO     | nevents: 400
[2026-03-01 08:58:56] 2026-03-01 07:38:33,451 | INFO     | neventsw: 0
[2026-03-01 08:58:56] 2026-03-01 07:38:33,451 | INFO     | pid: 1926154
[2026-03-01 08:58:56] 2026-03-01 07:38:33,451 | INFO     | pgrp: 1926154
[2026-03-01 08:58:56] 2026-03-01 07:38:33,451 | INFO     | corecount: 4
[2026-03-01 08:58:56] 2026-03-01 07:38:33,451 | INFO     | event service: False
[2026-03-01 08:58:56] 2026-03-01 07:38:33,452 | INFO     | sizes: {0: 2281959, 1: 2282249, 11: 2282249, 17009: 2314401, 17013: 2323423, 17014: 2323801}
[2026-03-01 08:58:56] 2026-03-01 07:38:33,452 | INFO     | --------------------------------------------------
[2026-03-01 08:58:56] 2026-03-01 07:38:33,452 | INFO     | 
[2026-03-01 08:58:56] 2026-03-01 07:38:33,452 | INFO     | executing command: ls -lF /scratch/boinc/var/slot108/slots/0
[2026-03-01 08:58:56] 2026-03-01 07:38:33,483 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-01 08:58:56] 2026-03-01 07:38:33,484 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-01 08:58:56] 2026-03-01 07:38:33,484 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-01 08:58:56] 2026-03-01 07:38:33,484 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-01 08:58:56] 2026-03-01 07:38:33,484 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-01 08:58:56] 2026-03-01 07:38:33,484 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-01 08:58:56] 2026-03-01 07:38:33,484 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-01 08:58:56] 2026-03-01 07:38:33,484 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-01 08:58:56] 2026-03-01 07:38:33,485 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-01 08:58:56] 2026-03-01 07:38:33,485 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-01 08:58:56] 2026-03-01 07:38:33,485 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-01 08:58:56] 2026-03-01 07:38:33,485 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-01 08:58:56] 2026-03-01 07:38:33,485 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-01 08:58:56] 2026-03-01 07:38:33,485 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-01 08:58:56] 2026-03-01 07:38:33,485 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-01 08:58:56] 2026-03-01 07:38:33,485 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-01 08:58:56] 2026-03-01 07:38:33,485 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-01 08:58:56] 2026-03-01 07:38:33,486 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-01 08:58:56] 2026-03-01 07:38:33,486 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-01 08:58:56] 2026-03-01 07:38:33,486 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-01 08:58:56] 2026-03-01 07:38:33,486 | INFO     | job 7019603453 has completed (purged errors)
[2026-03-01 08:58:56] 2026-03-01 07:38:33,486 | INFO     | overall cleanup function is called
[2026-03-01 08:58:56] 2026-03-01 07:38:34,496 | INFO     | --- collectZombieJob: --- 10, [1926154]
[2026-03-01 08:58:56] 2026-03-01 07:38:34,496 | INFO     | zombie collector waiting for pid 1926154
[2026-03-01 08:58:56] 2026-03-01 07:38:34,496 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-01 08:58:56] 2026-03-01 07:38:34,497 | INFO     | collected zombie processes
[2026-03-01 08:58:56] 2026-03-01 07:38:34,497 | INFO     | will attempt to kill all subprocesses of pid=1926154
[2026-03-01 08:58:56] 2026-03-01 07:38:35,180 | INFO     | PID=1863833 has CPU usage=28.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-03-01 08:58:56] 2026-03-01 07:38:35,181 | INFO     | .. there are 17 such processes running
[2026-03-01 08:58:56] 2026-03-01 07:38:35,899 | INFO     | process IDs to be killed: [1926154] (in reverse order)
[2026-03-01 08:58:56] 2026-03-01 07:38:36,247 | WARNING  | found no corresponding commands to process id(s)
[2026-03-01 08:58:56] 2026-03-01 07:38:36,248 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-01 08:58:56] 2026-03-01 07:38:36,283 | INFO     | did not find any defunct processes belonging to 1926154
[2026-03-01 08:58:56] 2026-03-01 07:38:36,316 | INFO     | did not find any defunct processes belonging to 1926154
[2026-03-01 08:58:56] 2026-03-01 07:38:36,316 | INFO     | ready for new job
[2026-03-01 08:58:56] 2026-03-01 07:38:36,316 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-01 08:58:56] 2026-03-01 07:38:36,319 | INFO     | **************************************
[2026-03-01 08:58:56] 2026-03-01 07:38:36,319 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-01 08:58:56] 2026-03-01 07:38:36,319 | INFO     | **************************************
[2026-03-01 08:58:56] 2026-03-01 07:38:36,320 | INFO     | 
[2026-03-01 08:58:56] 2026-03-01 07:38:36,328 | INFO     | architecture information:
[2026-03-01 08:58:56] 2026-03-01 07:38:36,328 | INFO     | executing command: cat /etc/os-release
[2026-03-01 08:58:56] 2026-03-01 07:38:36,357 | INFO     | cat /etc/os-release:
[2026-03-01 08:58:56] NAME="CentOS Linux"
[2026-03-01 08:58:56] VERSION="7 (Core)"
[2026-03-01 08:58:56] ID="centos"
[2026-03-01 08:58:56] ID_LIKE="rhel fedora"
[2026-03-01 08:58:56] VERSION_ID="7"
[2026-03-01 08:58:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-01 08:58:56] ANSI_COLOR="0;31"
[2026-03-01 08:58:56] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-01 08:58:56] HOME_URL="https://www.centos.org/"
[2026-03-01 08:58:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-01 08:58:56] 
[2026-03-01 08:58:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-01 08:58:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-01 08:58:56] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-01 08:58:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-01 08:58:56] 
[2026-03-01 08:58:56] 2026-03-01 07:38:36,358 | INFO     | **************************************
[2026-03-01 08:58:56] 2026-03-01 07:38:36,861 | INFO     | executing command: df -mP /scratch/boinc/var/slot108/slots/0
[2026-03-01 08:58:56] 2026-03-01 07:38:36,884 | INFO     | sufficient remaining disk space (3311095775232 B)
[2026-03-01 08:58:56] 2026-03-01 07:38:36,885 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-01 08:58:56] 2026-03-01 07:38:36,885 | INFO     | current server update state: UPDATING_FINAL
[2026-03-01 08:58:56] 2026-03-01 07:38:36,885 | INFO     | update_server=False
[2026-03-01 08:58:56] 2026-03-01 07:38:36,885 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-01 08:58:56] 2026-03-01 07:38:37,015 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-01 08:58:56] 2026-03-01 07:38:37,015 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-01 08:58:56] 2026-03-01 07:38:37,015 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-01 08:58:56] 2026-03-01 07:38:37,015 | INFO     | will abort loop
[2026-03-01 08:58:56] 2026-03-01 07:38:37,335 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-01 08:58:56] 2026-03-01 07:38:37,393 | INFO     | all data control threads have been joined
[2026-03-01 08:58:56] 2026-03-01 07:38:37,447 | INFO     | all payload control threads have been joined
[2026-03-01 08:58:56] 2026-03-01 07:38:37,890 | INFO     | [job] retrieve thread has finished
[2026-03-01 08:58:56] 2026-03-01 07:38:38,000 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-01 08:58:56] 2026-03-01 07:38:38,020 | INFO     | [job] job monitor thread has finished
[2026-03-01 08:58:56] 2026-03-01 07:38:38,118 | INFO     | [job] validate thread has finished
[2026-03-01 08:58:56] 2026-03-01 07:38:38,133 | INFO     | [payload] validate_pre thread has finished
[2026-03-01 08:58:56] 2026-03-01 07:38:38,274 | INFO     | all job control threads have been joined
[2026-03-01 08:58:56] 2026-03-01 07:38:38,398 | INFO     | [data] control thread has finished
[2026-03-01 08:58:56] 2026-03-01 07:38:38,452 | INFO     | [payload] control thread has finished
[2026-03-01 08:58:56] 2026-03-01 07:38:38,457 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-01 08:58:56] 2026-03-01 07:38:38,633 | INFO     | [job] create_data_payload thread has finished
[2026-03-01 08:58:56] 2026-03-01 07:38:38,675 | INFO     | [payload] execute_payloads thread has finished
[2026-03-01 08:58:56] 2026-03-01 07:38:38,802 | INFO     | [data] copytool_in thread has finished
[2026-03-01 08:58:56] 2026-03-01 07:38:39,208 | INFO     | [payload] failed_post thread has finished
[2026-03-01 08:58:56] 2026-03-01 07:38:39,279 | INFO     | [job] control thread has finished
[2026-03-01 08:58:56] 2026-03-01 07:38:39,286 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-01 08:58:56] 2026-03-01 07:38:39,340 | INFO     | [data] copytool_out thread has finished
[2026-03-01 08:58:56] 2026-03-01 07:38:39,362 | INFO     | [payload] validate_post thread has finished
[2026-03-01 08:58:56] 2026-03-01 07:38:39,458 | INFO     | [job] queue monitor thread has finished
[2026-03-01 08:58:56] 2026-03-01 07:38:43,292 | INFO     | [data] queue_monitor thread has finished
[2026-03-01 08:58:56] 2026-03-01 07:39:08,371 | INFO     | PID=1863833 has CPU usage=7.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-01 08:58:56] 2026-03-01 07:39:08,371 | INFO     | .. there are 17 such processes running
[2026-03-01 08:58:56] 2026-03-01 07:39:08,372 | INFO     | found 0 job(s) in 20 queues
[2026-03-01 08:58:56] 2026-03-01 07:39:08,372 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-01 08:58:56] 2026-03-01 07:39:08,372 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-01 08:58:56] 2026-03-01 07:39:16,695 | INFO     | [monitor] cgroup control has ended
[2026-03-01 08:58:56] 2026-03-01 07:39:17,951 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22718220011328)>', '<ExcThread(monitor, started 22717972870912)>']
[2026-03-01 08:58:56] 2026-03-01 07:39:18,425 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-01 08:58:56] 2026-03-01 07:39:18,425 | INFO     | [monitor] control thread has ended
[2026-03-01 08:58:56] 2026-03-01 07:39:22,976 | INFO     | all workflow threads have been joined
[2026-03-01 08:58:56] 2026-03-01 07:39:22,976 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-01 08:58:56] 2026-03-01 07:39:22,976 | INFO     | traces error code: 0
[2026-03-01 08:58:56] 2026-03-01 07:39:22,976 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-01 08:58:56] 2026-03-01 07:39:23,122 [wrapper] ==== pilot stdout END ====
[2026-03-01 08:58:56] 2026-03-01 07:39:23,126 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-01 08:58:56] 2026-03-01 07:39:23,130 [wrapper] pilotpid: 1863833
[2026-03-01 08:58:56] 2026-03-01 07:39:23,134 [wrapper] Pilot exit status: 0
[2026-03-01 08:58:56] 2026-03-01 07:39:23,151 [wrapper] pandaids: 7019603453
[2026-03-01 08:58:56] 2026-03-01 07:39:23,386 [wrapper] cleanup supervisor_pilot 2243321 1863834
[2026-03-01 08:58:56] 2026-03-01 07:39:23,390 [wrapper] Test setup, not cleaning
[2026-03-01 08:58:56] 2026-03-01 07:39:23,394 [wrapper] apfmon messages muted
[2026-03-01 08:58:56] 2026-03-01 07:39:23,399 [wrapper] ==== wrapper stdout END ====
[2026-03-01 08:58:56] 2026-03-01 07:39:23,404 [wrapper] ==== wrapper stderr END ====
[2026-03-01 08:58:56]  *** Error codes and diagnostics ***
[2026-03-01 08:58:56]     "exeErrorCode": 0,
[2026-03-01 08:58:56]     "exeErrorDiag": "",
[2026-03-01 08:58:56]     "pilotErrorCode": 0,
[2026-03-01 08:58:56]     "pilotErrorDiag": "",
[2026-03-01 08:58:56]  *** Listing of results directory ***
[2026-03-01 08:58:56] total 949216
[2026-03-01 08:58:56] -rw-r--r-- 1 boinc boinc    584627 Feb 18 17:25 pilot3.tar.gz
[2026-03-01 08:58:56] -rwx------ 1 boinc boinc     36322 Feb 18 17:26 runpilot2-wrapper.sh
[2026-03-01 08:58:56] -rw-r--r-- 1 boinc boinc      5111 Feb 18 17:28 queuedata.json
[2026-03-01 08:58:56] -rw-r--r-- 1 boinc boinc       100 Mar  1 03:54 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-01 08:58:56] -rwxr-xr-x 1 boinc boinc      7986 Mar  1 03:54 run_atlas
[2026-03-01 08:58:56] -rw-r--r-- 1 boinc boinc       105 Mar  1 03:54 job.xml
[2026-03-01 08:58:56] -rw-r--r-- 2 boinc boinc 675947175 Mar  1 03:54 EVNT.48508760._000274.pool.root.1
[2026-03-01 08:58:56] -rw-r--r-- 1 boinc boinc      6700 Mar  1 03:54 init_data.xml
[2026-03-01 08:58:56] -rw-r--r-- 2 boinc boinc     15845 Mar  1 03:54 start_atlas.sh
[2026-03-01 08:58:56] drwxrwx--x 2 boinc boinc      4096 Mar  1 03:54 shared
[2026-03-01 08:58:56] -rw-r--r-- 2 boinc boinc    597970 Mar  1 03:54 input.tar.gz
[2026-03-01 08:58:56] -rw-r--r-- 1 boinc boinc         0 Mar  1 03:54 boinc_lockfile
[2026-03-01 08:58:56] -rw-r--r-- 1 boinc boinc      2551 Mar  1 03:54 pandaJob.out
[2026-03-01 08:58:56] -rw------- 1 boinc boinc    998790 Mar  1 03:54 agis_schedconf.cvmfs.json
[2026-03-01 08:58:56] -rw------- 1 boinc boinc       443 Mar  1 03:54 workernode_map.json
[2026-03-01 08:58:56] drwx------ 5 boinc boinc      4096 Mar  1 03:54 pilot3
[2026-03-01 08:58:56] -rw-r--r-- 1 boinc boinc       529 Mar  1 08:37 boinc_task_state.xml
[2026-03-01 08:58:56] -rw------- 1 boinc boinc 286746025 Mar  1 08:37 HITS.48508763._035312.pool.root.1
[2026-03-01 08:58:56] -rw------- 1 boinc boinc      1028 Mar  1 08:38 memory_monitor_summary.json
[2026-03-01 08:58:56] -rw------- 1 boinc boinc   1513015 Mar  1 08:38 agis_ddmendpoints.agis.ALL.json
[2026-03-01 08:58:56] -rw------- 1 boinc boinc    436729 Mar  1 08:38 log.48508763._035312.job.log.tgz.1
[2026-03-01 08:58:56] -rw------- 1 boinc boinc      6356 Mar  1 08:38 heartbeat.json
[2026-03-01 08:58:56] -rw------- 1 boinc boinc        95 Mar  1 08:39 pilot_heartbeat.json
[2026-03-01 08:58:56] -rw------- 1 boinc boinc      5018 Mar  1 08:39 pilotlog.txt
[2026-03-01 08:58:56] -rw------- 1 boinc boinc   2250214 Mar  1 08:39 log.48508763._035312.job.log.1
[2026-03-01 08:58:56] -rw------- 1 boinc boinc       357 Mar  1 08:39 output.list
[2026-03-01 08:58:56] -rw-r--r-- 1 boinc boinc       620 Mar  1 08:39 runtime_log
[2026-03-01 08:58:56] -rw------- 1 boinc boinc   2703360 Mar  1 08:39 result.tar.gz
[2026-03-01 08:58:56] -rw-r--r-- 1 boinc boinc      9222 Mar  1 08:39 runtime_log.err
[2026-03-01 08:58:56] -rw------- 1 boinc boinc       666 Mar  1 08:39 Cv2MDmxYzC9n9Rq4apOajLDm4fhM0noT9bVooX4SDmq6uKDmHnDl1n.diag
[2026-03-01 08:58:56] -rw-r--r-- 1 boinc boinc      8192 Mar  1 08:58 boinc_mmap_file
[2026-03-01 08:58:56] -rw-r--r-- 1 boinc boinc        26 Mar  1 08:58 wrapper_checkpoint.txt
[2026-03-01 08:58:56] -rw-r--r-- 1 boinc boinc     21017 Mar  1 08:58 stderr.txt
[2026-03-01 08:58:56] HITS file was successfully produced:
[2026-03-01 08:58:56] -rw------- 1 boinc boinc 286746025 Mar  1 08:37 shared/HITS.pool.root.1
[2026-03-01 08:58:56]  *** Contents of shared directory: ***
[2026-03-01 08:58:56] total 943384
[2026-03-01 08:58:56] -rw-r--r-- 2 boinc boinc 675947175 Mar  1 03:54 ATLAS.root_0
[2026-03-01 08:58:56] -rw-r--r-- 2 boinc boinc     15845 Mar  1 03:54 start_atlas.sh
[2026-03-01 08:58:56] -rw-r--r-- 2 boinc boinc    597970 Mar  1 03:54 input.tar.gz
[2026-03-01 08:58:56] -rw------- 1 boinc boinc 286746025 Mar  1 08:37 HITS.pool.root.1
[2026-03-01 08:58:56] -rw------- 1 boinc boinc   2703360 Mar  1 08:39 result.tar.gz
08:58:58 (1832437): run_atlas exited; CPU time 61216.690051
08:58:58 (1832437): called boinc_finish(0)

</stderr_txt>
]]>

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