Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
18:34:07 (270132): wrapper (7.7.26015): starting
18:34:07 (270132): wrapper: running run_atlas (--nthreads 2)
[2026-02-27 18:34:07] Arguments: --nthreads 2
[2026-02-27 18:34:07] Threads: 2
[2026-02-27 18:34:07] Checking for CVMFS
[2026-02-27 18:34:07] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-27 18:34:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-27 18:34:07] Running cvmfs_config stat atlas.cern.ch
[2026-02-27 18:34:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-27 18:34:07] 2.9.2.0 6350 3083 57952 156703 3 49 24780005 36864001 0 130560 0 782815 99.968 131845 715 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-02-27 18:34:07] CVMFS is ok
[2026-02-27 18:34:07] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-27 18:34:07] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-27 18:34:07] Further information can be found at the LHC@home message board.
[2026-02-27 18:34:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-27 18:34:07] Checking for apptainer binary...
[2026-02-27 18:34:07] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-27 18:34:07] Running /usr/bin/apptainer --version
[2026-02-27 18:34:07] apptainer version 1.4.1-1.1
[2026-02-27 18:34:07] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-27 18:34:07] legendA165
[2026-02-27 18:34:07] apptainer works
[2026-02-27 18:34:07] Set ATHENA_PROC_NUMBER=2
[2026-02-27 18:34:07] Set ATHENA_CORE_NUMBER=2
[2026-02-27 18:34:07] Starting ATLAS job with PandaID=7030929700
[2026-02-27 18:34:07] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-27 22:52:52]  *** The last 200 lines of the pilot log: ***
[2026-02-27 22:52:52] 2026-02-27 21:52:07,544 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-27 22:52:52] 2026-02-27 21:52:07,544 | INFO     | collected zombie processes
[2026-02-27 22:52:52] 2026-02-27 21:52:07,545 | INFO     | will attempt to kill all subprocesses of pid=278567
[2026-02-27 22:52:52] 2026-02-27 21:52:07,573 | INFO     | process IDs to be killed: [278567] (in reverse order)
[2026-02-27 22:52:52] 2026-02-27 21:52:07,594 | WARNING  | found no corresponding commands to process id(s)
[2026-02-27 22:52:52] 2026-02-27 21:52:07,594 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-27 22:52:52] 2026-02-27 21:52:07,595 | INFO     | did not find any defunct processes belonging to 278567
[2026-02-27 22:52:52] 2026-02-27 21:52:07,595 | INFO     | did not find any defunct processes belonging to 278567
[2026-02-27 22:52:52] 2026-02-27 21:52:07,595 | INFO     | ready for new job
[2026-02-27 22:52:52] 2026-02-27 21:52:07,596 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-27 22:52:52] 2026-02-27 21:52:07,596 | INFO     | **************************************
[2026-02-27 22:52:52] 2026-02-27 21:52:07,596 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-27 22:52:52] 2026-02-27 21:52:07,596 | INFO     | **************************************
[2026-02-27 22:52:52] 2026-02-27 21:52:07,596 | INFO     | 
[2026-02-27 22:52:52] 2026-02-27 21:52:07,596 | INFO     | architecture information:
[2026-02-27 22:52:52] 2026-02-27 21:52:07,597 | INFO     | executing command: cat /etc/os-release
[2026-02-27 22:52:52] 2026-02-27 21:52:07,605 | INFO     | cat /etc/os-release:
[2026-02-27 22:52:52] NAME="CentOS Linux"
[2026-02-27 22:52:52] VERSION="7 (Core)"
[2026-02-27 22:52:52] ID="centos"
[2026-02-27 22:52:52] ID_LIKE="rhel fedora"
[2026-02-27 22:52:52] VERSION_ID="7"
[2026-02-27 22:52:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-27 22:52:52] ANSI_COLOR="0;31"
[2026-02-27 22:52:52] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-27 22:52:52] HOME_URL="https://www.centos.org/"
[2026-02-27 22:52:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-27 22:52:52] 
[2026-02-27 22:52:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-27 22:52:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-27 22:52:52] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-27 22:52:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-27 22:52:52] 
[2026-02-27 22:52:52] 2026-02-27 21:52:07,605 | INFO     | **************************************
[2026-02-27 22:52:52] 2026-02-27 21:52:08,108 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-02-27 22:52:52] 2026-02-27 21:52:08,121 | INFO     | sufficient remaining disk space (185143918592 B)
[2026-02-27 22:52:52] 2026-02-27 21:52:08,121 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-27 22:52:52] 2026-02-27 21:52:08,121 | INFO     | current server update state: UPDATING_FINAL
[2026-02-27 22:52:52] 2026-02-27 21:52:08,121 | INFO     | update_server=False
[2026-02-27 22:52:52] 2026-02-27 21:52:08,121 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-27 22:52:52] 2026-02-27 21:52:08,121 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-27 22:52:52] 2026-02-27 21:52:08,121 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-27 22:52:52] 2026-02-27 21:52:08,212 | INFO     | all payload control threads have been joined
[2026-02-27 22:52:52] 2026-02-27 21:52:08,712 | INFO     | all job control threads have been joined
[2026-02-27 22:52:52] 2026-02-27 21:52:08,927 | INFO     | all data control threads have been joined
[2026-02-27 22:52:52] 2026-02-27 21:52:08,938 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-27 22:52:52] 2026-02-27 21:52:08,939 | INFO     | aborting loop
[2026-02-27 22:52:52] 2026-02-27 21:52:09,127 | INFO     | [job] queue monitor thread has finished
[2026-02-27 22:52:52] 2026-02-27 21:52:09,127 | INFO     | [job] retrieve thread has finished
[2026-02-27 22:52:52] 2026-02-27 21:52:09,218 | INFO     | [payload] control thread has finished
[2026-02-27 22:52:52] 2026-02-27 21:52:09,315 | INFO     | [data] copytool_in thread has finished
[2026-02-27 22:52:52] 2026-02-27 21:52:09,604 | INFO     | [payload] failed_post thread has finished
[2026-02-27 22:52:52] 2026-02-27 21:52:09,618 | INFO     | [payload] execute_payloads thread has finished
[2026-02-27 22:52:52] 2026-02-27 21:52:09,718 | INFO     | [job] control thread has finished
[2026-02-27 22:52:52] 2026-02-27 21:52:09,933 | INFO     | [data] control thread has finished
[2026-02-27 22:52:52] 2026-02-27 21:52:09,944 | INFO     | [job] job monitor thread has finished
[2026-02-27 22:52:52] 2026-02-27 21:52:10,127 | INFO     | [data] copytool_out thread has finished
[2026-02-27 22:52:52] 2026-02-27 21:52:10,142 | INFO     | [payload] validate_post thread has finished
[2026-02-27 22:52:52] 2026-02-27 21:52:10,295 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-27 22:52:52] 2026-02-27 21:52:10,386 | INFO     | [payload] validate_pre thread has finished
[2026-02-27 22:52:52] 2026-02-27 21:52:10,432 | INFO     | [job] create_data_payload thread has finished
[2026-02-27 22:52:52] 2026-02-27 21:52:10,440 | INFO     | [job] validate thread has finished
[2026-02-27 22:52:52] 2026-02-27 21:52:14,303 | INFO     | [data] queue_monitor thread has finished
[2026-02-27 22:52:52] 2026-02-27 21:52:18,201 | INFO     | job.realtimelogging is not enabled
[2026-02-27 22:52:52] 2026-02-27 21:52:19,206 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-27 22:52:52] 2026-02-27 21:52:37,938 | INFO     | PID=274153 has CPU usage=0.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-02-27 22:52:52] 2026-02-27 21:52:37,938 | INFO     | found 0 job(s) in 20 queues
[2026-02-27 22:52:52] 2026-02-27 21:52:37,938 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-27 22:52:52] 2026-02-27 21:52:37,938 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-27 22:52:52] 2026-02-27 21:52:45,832 | INFO     | [monitor] cgroup control has ended
[2026-02-27 22:52:52] 2026-02-27 21:52:47,639 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140504085800768)>', '<ExcThread(monitor, started 140502993196800)>']
[2026-02-27 22:52:52] 2026-02-27 21:52:47,991 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-27 22:52:52] 2026-02-27 21:52:47,991 | INFO     | [monitor] control thread has ended
[2026-02-27 22:52:52] 2026-02-27 21:52:52,665 | INFO     | all workflow threads have been joined
[2026-02-27 22:52:52] 2026-02-27 21:52:52,665 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-27 22:52:52] 2026-02-27 21:52:52,666 | INFO     | traces error code: 0
[2026-02-27 22:52:52] 2026-02-27 21:52:52,666 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-27 22:52:52] 2026-02-27 21:52:52,708 [wrapper] ==== pilot stdout END ====
[2026-02-27 22:52:52] 2026-02-27 21:52:52,711 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-27 22:52:52] 2026-02-27 21:52:52,713 [wrapper] pilotpid: 274153
[2026-02-27 22:52:52] 2026-02-27 21:52:52,716 [wrapper] Pilot exit status: 0
[2026-02-27 22:52:52] 2026-02-27 21:52:52,722 [wrapper] pandaids: 7030929700
[2026-02-27 22:52:52] 2026-02-27 21:52:52,735 [wrapper] cleanup supervisor_pilot  285897 274154
[2026-02-27 22:52:52] 2026-02-27 21:52:52,737 [wrapper] Test setup, not cleaning
[2026-02-27 22:52:52] 2026-02-27 21:52:52,740 [wrapper] apfmon messages muted
[2026-02-27 22:52:52] 2026-02-27 21:52:52,742 [wrapper] ==== wrapper stdout END ====
[2026-02-27 22:52:52] 2026-02-27 21:52:52,743 [wrapper] ==== wrapper stderr END ====
[2026-02-27 22:52:52]  *** Error codes and diagnostics ***
[2026-02-27 22:52:52]     "exeErrorCode": 0,
[2026-02-27 22:52:52]     "exeErrorDiag": "",
[2026-02-27 22:52:52]     "pilotErrorCode": 0,
[2026-02-27 22:52:52]     "pilotErrorDiag": "",
[2026-02-27 22:52:52]  *** Listing of results directory ***
[2026-02-27 22:52:52] total 425948
[2026-02-27 22:52:52] -rw-r--r-- 1 boinc boinc    584627 Feb 26 20:44 pilot3.tar.gz
[2026-02-27 22:52:52] -rwx------ 1 boinc boinc     36322 Feb 26 20:46 runpilot2-wrapper.sh
[2026-02-27 22:52:52] -rw-r--r-- 1 boinc boinc      5111 Feb 26 20:48 queuedata.json
[2026-02-27 22:52:52] -rw-r--r-- 1 boinc boinc       100 Feb 27 18:34 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-27 22:52:52] -rwxr-xr-x 1 boinc boinc      7986 Feb 27 18:34 run_atlas
[2026-02-27 22:52:52] -rw-r--r-- 1 boinc boinc       105 Feb 27 18:34 job.xml
[2026-02-27 22:52:52] -rw-r--r-- 2 boinc boinc 253005743 Feb 27 18:34 EVNT.48447477._000002.pool.root.1
[2026-02-27 22:52:52] -rw-r--r-- 2 boinc boinc    597960 Feb 27 18:34 input.tar.gz
[2026-02-27 22:52:52] -rw-r--r-- 2 boinc boinc     15845 Feb 27 18:34 start_atlas.sh
[2026-02-27 22:52:52] drwxrwx--x 2 boinc boinc      4096 Feb 27 18:34 shared
[2026-02-27 22:52:52] -rw-r--r-- 1 boinc boinc         0 Feb 27 18:34 boinc_setup_complete
[2026-02-27 22:52:52] -rw-r--r-- 1 boinc boinc      6209 Feb 27 18:34 init_data.xml
[2026-02-27 22:52:52] -rw-r--r-- 1 boinc boinc         0 Feb 27 18:34 boinc_lockfile
[2026-02-27 22:52:52] -rw-r--r-- 1 boinc boinc      2601 Feb 27 18:34 pandaJob.out
[2026-02-27 22:52:52] -rw------- 1 boinc boinc    998782 Feb 27 18:34 agis_schedconf.cvmfs.json
[2026-02-27 22:52:52] -rw------- 1 boinc boinc       423 Feb 27 18:34 workernode_map.json
[2026-02-27 22:52:52] drwx------ 5 boinc boinc      4096 Feb 27 18:34 pilot3
[2026-02-27 22:52:52] -rw------- 1 boinc boinc        95 Feb 27 22:51 pilot_heartbeat.json
[2026-02-27 22:52:52] -rw------- 1 boinc boinc 174128272 Feb 27 22:51 HITS.48843077._000042.pool.root.1
[2026-02-27 22:52:52] -rw-r--r-- 1 boinc boinc       530 Feb 27 22:51 boinc_task_state.xml
[2026-02-27 22:52:52] -rw------- 1 boinc boinc      1014 Feb 27 22:51 memory_monitor_summary.json
[2026-02-27 22:52:52] -rw------- 1 boinc boinc   1513015 Feb 27 22:52 agis_ddmendpoints.agis.ALL.json
[2026-02-27 22:52:52] -rw------- 1 boinc boinc    392680 Feb 27 22:52 log.48843077._000042.job.log.tgz.1
[2026-02-27 22:52:52] -rw------- 1 boinc boinc      6297 Feb 27 22:52 heartbeat.json
[2026-02-27 22:52:52] -rw-r--r-- 1 boinc boinc      8192 Feb 27 22:52 boinc_mmap_file
[2026-02-27 22:52:52] -rw-r--r-- 1 boinc boinc        28 Feb 27 22:52 wrapper_checkpoint.txt
[2026-02-27 22:52:52] -rw------- 1 boinc boinc      4819 Feb 27 22:52 pilotlog.txt
[2026-02-27 22:52:52] -rw------- 1 boinc boinc   2170909 Feb 27 22:52 log.48843077._000042.job.log.1
[2026-02-27 22:52:52] -rw------- 1 boinc boinc       357 Feb 27 22:52 output.list
[2026-02-27 22:52:52] -rw-r--r-- 1 boinc boinc       620 Feb 27 22:52 runtime_log
[2026-02-27 22:52:52] -rw------- 1 boinc boinc   2580480 Feb 27 22:52 result.tar.gz
[2026-02-27 22:52:52] -rw-r--r-- 1 boinc boinc      8917 Feb 27 22:52 runtime_log.err
[2026-02-27 22:52:52] -rw------- 1 boinc boinc       665 Feb 27 22:52 NcWMDmfUwF9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDm7a3KDmE6xVcm.diag
[2026-02-27 22:52:52] -rw-r--r-- 1 boinc boinc     10491 Feb 27 22:52 stderr.txt
[2026-02-27 22:52:52] HITS file was successfully produced:
[2026-02-27 22:52:52] -rw------- 1 boinc boinc 174128272 Feb 27 22:51 shared/HITS.pool.root.1
[2026-02-27 22:52:52]  *** Contents of shared directory: ***
[2026-02-27 22:52:52] total 420248
[2026-02-27 22:52:52] -rw-r--r-- 2 boinc boinc 253005743 Feb 27 18:34 ATLAS.root_0
[2026-02-27 22:52:52] -rw-r--r-- 2 boinc boinc    597960 Feb 27 18:34 input.tar.gz
[2026-02-27 22:52:52] -rw-r--r-- 2 boinc boinc     15845 Feb 27 18:34 start_atlas.sh
[2026-02-27 22:52:52] -rw------- 1 boinc boinc 174128272 Feb 27 22:51 HITS.pool.root.1
[2026-02-27 22:52:52] -rw------- 1 boinc boinc   2580480 Feb 27 22:52 result.tar.gz
22:52:54 (270132): run_atlas exited; CPU time 30395.307087
22:52:54 (270132): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN