Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
18:54:19 (30430): wrapper (7.7.26015): starting
18:54:19 (30430): wrapper: running run_atlas (--nthreads 8)
[2026-02-26 18:54:19] Arguments: --nthreads 8
[2026-02-26 18:54:19] Threads: 8
[2026-02-26 18:54:19] Checking for CVMFS
[2026-02-26 18:54:19] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-26 18:54:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-26 18:54:19] Running cvmfs_config stat atlas.cern.ch
[2026-02-26 18:54:19] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-26 18:54:19] 2.11.2.0 2804 195692 115048 156673 2 51 19951622 20275201 1 130560 0 48684342 99.830 14077963 31368 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-02-26 18:54:19] CVMFS is ok
[2026-02-26 18:54:19] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-26 18:54:19] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-26 18:54:19] Further information can be found at the LHC@home message board.
[2026-02-26 18:54:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-26 18:54:19] Checking for apptainer binary...
[2026-02-26 18:54:19] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-26 18:54:19] Running /usr/bin/apptainer --version
[2026-02-26 18:54:19] apptainer version 1.3.2-1.el7
[2026-02-26 18:54:19] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-26 18:54:21] c-204-28.aglt2.org
[2026-02-26 18:54:21] apptainer works
[2026-02-26 18:54:21] Set ATHENA_PROC_NUMBER=8
[2026-02-26 18:54:21] Set ATHENA_CORE_NUMBER=8
[2026-02-26 18:54:21] Starting ATLAS job with PandaID=7030821744
[2026-02-26 18:54:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
20:27:39 (10311): wrapper (7.7.26015): starting
20:27:39 (10311): wrapper: running run_atlas (--nthreads 8)
[2026-02-26 20:27:39] Arguments: --nthreads 8
[2026-02-26 20:27:39] Threads: 8
[2026-02-26 20:27:39] This job has been restarted, cleaning up previous attempt
[2026-02-26 20:27:39] Checking for CVMFS
[2026-02-26 20:27:39] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-26 20:27:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-26 20:27:40] Running cvmfs_config stat atlas.cern.ch
[2026-02-26 20:27:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-26 20:27:40] 2.11.2.0 2804 195785 116804 156677 2 11 20108039 20275200 1 130560 0 48735949 99.830 14085971 31372 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-02-26 20:27:40] CVMFS is ok
[2026-02-26 20:27:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-26 20:27:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-26 20:27:40] Further information can be found at the LHC@home message board.
[2026-02-26 20:27:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-26 20:27:40] Checking for apptainer binary...
[2026-02-26 20:27:40] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-26 20:27:40] Running /usr/bin/apptainer --version
[2026-02-26 20:27:40] apptainer version 1.3.2-1.el7
[2026-02-26 20:27:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-26 20:27:42] c-204-28.aglt2.org
[2026-02-26 20:27:42] apptainer works
[2026-02-26 20:27:42] Set ATHENA_PROC_NUMBER=8
[2026-02-26 20:27:42] Set ATHENA_CORE_NUMBER=8
[2026-02-26 20:27:42] Starting ATLAS job with PandaID=7030821744
[2026-02-26 20:27:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-26 22:55:22]  *** The last 200 lines of the pilot log: ***
[2026-02-26 22:55:22] 2026-02-27 03:54:50,049 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-02-26 22:55:22] 2026-02-27 03:54:50,135 | INFO     | job 7030821744 has state=finished
[2026-02-26 22:55:22] 2026-02-27 03:54:50,135 | INFO     | preparing for final server update for job 7030821744 in state='finished'
[2026-02-26 22:55:22] 2026-02-27 03:54:50,135 | INFO     | reading metadata from: /tmp/boinchome/slots/0/PanDA_Pilot-7030821744/jobReport.json
[2026-02-26 22:55:22] 2026-02-27 03:54:50,138 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/0/workernode_map.json
[2026-02-26 22:55:22] 2026-02-27 03:54:50,139 | INFO     | this job has now completed (state=finished)
[2026-02-26 22:55:22] 2026-02-27 03:54:50,139 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-26 22:55:22] 2026-02-27 03:54:50,139 | INFO     | log transfer has been attempted: DONE
[2026-02-26 22:55:22] 2026-02-27 03:54:50,139 | INFO     | job 7030821744 has finished - writing final server update
[2026-02-26 22:55:22] 2026-02-27 03:54:50,140 | INFO     | total number of processed events: 400 (read)
[2026-02-26 22:55:22] 2026-02-27 03:54:50,141 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7030821744/memory_monitor_summary.json (trf name=prmon)
[2026-02-26 22:55:22] 2026-02-27 03:54:50,142 | INFO     | extracted standard info from prmon json
[2026-02-26 22:55:22] 2026-02-27 03:54:50,142 | INFO     | extracted standard memory fields from prmon json
[2026-02-26 22:55:22] 2026-02-27 03:54:50,142 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-26 22:55:22] 2026-02-27 03:54:50,142 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-26 22:55:22] 2026-02-27 03:54:50,143 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-26 22:55:22] 2026-02-27 03:54:50,145 | INFO     | fitting pss+swap vs Time
[2026-02-26 22:55:22] 2026-02-27 03:54:50,145 | INFO     | sum of square deviations: 925859220.0
[2026-02-26 22:55:22] 2026-02-27 03:54:50,146 | INFO     | sum of deviations: -4738235878.000001
[2026-02-26 22:55:22] 2026-02-27 03:54:50,146 | INFO     | mean x: 1772160066.5
[2026-02-26 22:55:22] 2026-02-27 03:54:50,146 | INFO     | mean y: 2571816.4444444445
[2026-02-26 22:55:22] 2026-02-27 03:54:50,146 | INFO     | intersect: 9071890593.276594
[2026-02-26 22:55:22] 2026-02-27 03:54:50,147 | INFO     | chi2: 1.6703951784717208
[2026-02-26 22:55:22] 2026-02-27 03:54:50,147 | INFO     | sum of square deviations: 832722590.0
[2026-02-26 22:55:22] 2026-02-27 03:54:50,148 | INFO     | sum of deviations: -4246132285.9999995
[2026-02-26 22:55:22] 2026-02-27 03:54:50,148 | INFO     | mean x: 1772159914.0
[2026-02-26 22:55:22] 2026-02-27 03:54:50,148 | INFO     | mean y: 2572622.5323741008
[2026-02-26 22:55:22] 2026-02-27 03:54:50,148 | INFO     | intersect: 9038985849.643677
[2026-02-26 22:55:22] 2026-02-27 03:54:50,148 | INFO     | chi2: 1.6704553309429637
[2026-02-26 22:55:22] 2026-02-27 03:54:50,149 | INFO     | current chi2=1.6704553309429637 (change=-0.003601092245605516 %)
[2026-02-26 22:55:22] 2026-02-27 03:54:50,149 | INFO     | right removable region: 138
[2026-02-26 22:55:22] 2026-02-27 03:54:50,149 | INFO     | sum of square deviations: 832722590.0
[2026-02-26 22:55:22] 2026-02-27 03:54:50,150 | INFO     | sum of deviations: -27362298470.0
[2026-02-26 22:55:22] 2026-02-27 03:54:50,150 | INFO     | mean x: 1772160219.0
[2026-02-26 22:55:22] 2026-02-27 03:54:50,150 | INFO     | mean y: 2608287.35971223
[2026-02-26 22:55:22] 2026-02-27 03:54:50,150 | INFO     | intersect: 58233737634.9358
[2026-02-26 22:55:22] 2026-02-27 03:54:50,150 | INFO     | chi2: 0.155072862796471
[2026-02-26 22:55:22] 2026-02-27 03:54:50,150 | INFO     | current chi2=0.155072862796471 (change=90.71639664702873 %)
[2026-02-26 22:55:22] 2026-02-27 03:54:50,151 | INFO     | sum of square deviations: 746051197.5
[2026-02-26 22:55:22] 2026-02-27 03:54:50,151 | INFO     | sum of deviations: -27389836279.5
[2026-02-26 22:55:22] 2026-02-27 03:54:50,151 | INFO     | mean x: 1772160371.5
[2026-02-26 22:55:22] 2026-02-27 03:54:50,152 | INFO     | mean y: 2608232.7985074627
[2026-02-26 22:55:22] 2026-02-27 03:54:50,152 | INFO     | intersect: 65064071305.381935
[2026-02-26 22:55:22] 2026-02-27 03:54:50,152 | INFO     | chi2: 0.12618390807903768
[2026-02-26 22:55:22] 2026-02-27 03:54:50,152 | INFO     | current chi2=0.12618390807903768 (change=18.62927800291487 %)
[2026-02-26 22:55:22] 2026-02-27 03:54:50,152 | INFO     | left removable region: 20
[2026-02-26 22:55:22] 2026-02-27 03:54:50,152 | INFO     | sum of square deviations: 509440249.5
[2026-02-26 22:55:22] 2026-02-27 03:54:50,153 | INFO     | sum of deviations: -18978207729.5
[2026-02-26 22:55:22] 2026-02-27 03:54:50,153 | INFO     | mean x: 1772160493.5
[2026-02-26 22:55:22] 2026-02-27 03:54:50,153 | INFO     | mean y: 2595827.5508474577
[2026-02-26 22:55:22] 2026-02-27 03:54:50,153 | INFO     | intersect: 66020995450.79506
[2026-02-26 22:55:22] 2026-02-27 03:54:50,154 | INFO     | chi2: 0.11601392934583962
[2026-02-26 22:55:22] 2026-02-27 03:54:50,154 | INFO     | current memory leak: -37.25 B/s (using 118 data points, chi2=0.12)
[2026-02-26 22:55:22] 2026-02-27 03:54:50,154 | INFO     | could have reported an average CPU frequency of 1679 MHz (8 samples)
[2026-02-26 22:55:22] 2026-02-27 03:54:50,154 | INFO     | ..............................
[2026-02-26 22:55:22] 2026-02-27 03:54:50,155 | INFO     | . Timing measurements:
[2026-02-26 22:55:22] 2026-02-27 03:54:50,155 | INFO     | . get job = 0 s
[2026-02-26 22:55:22] 2026-02-27 03:54:50,155 | INFO     | . initial setup = 1 s
[2026-02-26 22:55:22] 2026-02-27 03:54:50,155 | INFO     | . payload setup = 8 s
[2026-02-26 22:55:22] 2026-02-27 03:54:50,155 | INFO     | . stage-in = 0 s
[2026-02-26 22:55:22] 2026-02-27 03:54:50,155 | INFO     | . payload execution = 8781 s
[2026-02-26 22:55:22] 2026-02-27 03:54:50,155 | INFO     | . stage-out = 2 s
[2026-02-26 22:55:22] 2026-02-27 03:54:50,155 | INFO     | . log creation = 0 s
[2026-02-26 22:55:22] 2026-02-27 03:54:50,155 | INFO     | ..............................
[2026-02-26 22:55:22] 2026-02-27 03:54:50,256 | INFO     | 
[2026-02-26 22:55:22] 2026-02-27 03:54:50,256 | INFO     | job summary report
[2026-02-26 22:55:22] 2026-02-27 03:54:50,257 | INFO     | --------------------------------------------------
[2026-02-26 22:55:22] 2026-02-27 03:54:50,257 | INFO     | PanDA job id: 7030821744
[2026-02-26 22:55:22] 2026-02-27 03:54:50,257 | INFO     | task id: 48842817
[2026-02-26 22:55:22] 2026-02-27 03:54:50,257 | INFO     | errors: (none)
[2026-02-26 22:55:22] 2026-02-27 03:54:50,257 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-26 22:55:22] 2026-02-27 03:54:50,257 | INFO     | pilot state: finished 
[2026-02-26 22:55:22] 2026-02-27 03:54:50,258 | INFO     | transexitcode: 0
[2026-02-26 22:55:22] 2026-02-27 03:54:50,258 | INFO     | exeerrorcode: 0
[2026-02-26 22:55:22] 2026-02-27 03:54:50,258 | INFO     | exeerrordiag: 
[2026-02-26 22:55:22] 2026-02-27 03:54:50,258 | INFO     | exitcode: 0
[2026-02-26 22:55:22] 2026-02-27 03:54:50,258 | INFO     | exitmsg: OK
[2026-02-26 22:55:22] 2026-02-27 03:54:50,258 | INFO     | cpuconsumptiontime: 65798 s
[2026-02-26 22:55:22] 2026-02-27 03:54:50,258 | INFO     | nevents: 400
[2026-02-26 22:55:22] 2026-02-27 03:54:50,259 | INFO     | neventsw: 0
[2026-02-26 22:55:22] 2026-02-27 03:54:50,259 | INFO     | pid: 16531
[2026-02-26 22:55:22] 2026-02-27 03:54:50,259 | INFO     | pgrp: 16531
[2026-02-26 22:55:22] 2026-02-27 03:54:50,259 | INFO     | corecount: 8
[2026-02-26 22:55:22] 2026-02-27 03:54:50,259 | INFO     | event service: False
[2026-02-26 22:55:22] 2026-02-27 03:54:50,259 | INFO     | sizes: {0: 2281896, 1: 2282357, 11: 2282357, 8794: 2310512, 8797: 2319510, 8800: 2319888}
[2026-02-26 22:55:22] 2026-02-27 03:54:50,259 | INFO     | --------------------------------------------------
[2026-02-26 22:55:22] 2026-02-27 03:54:50,259 | INFO     | 
[2026-02-26 22:55:22] 2026-02-27 03:54:50,260 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-02-26 22:55:22] 2026-02-27 03:54:50,287 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-26 22:55:22] 2026-02-27 03:54:50,287 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-26 22:55:22] 2026-02-27 03:54:50,288 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-26 22:55:22] 2026-02-27 03:54:50,288 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-26 22:55:22] 2026-02-27 03:54:50,288 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-26 22:55:22] 2026-02-27 03:54:50,288 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-26 22:55:22] 2026-02-27 03:54:50,289 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-26 22:55:22] 2026-02-27 03:54:50,289 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-26 22:55:22] 2026-02-27 03:54:50,289 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-26 22:55:22] 2026-02-27 03:54:50,289 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-26 22:55:22] 2026-02-27 03:54:50,290 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-26 22:55:22] 2026-02-27 03:54:50,290 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-26 22:55:22] 2026-02-27 03:54:50,290 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-26 22:55:22] 2026-02-27 03:54:50,290 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-26 22:55:22] 2026-02-27 03:54:50,291 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-26 22:55:22] 2026-02-27 03:54:50,291 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-26 22:55:22] 2026-02-27 03:54:50,291 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-26 22:55:22] 2026-02-27 03:54:50,291 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-26 22:55:22] 2026-02-27 03:54:50,291 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-26 22:55:22] 2026-02-27 03:54:50,292 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-26 22:55:22] 2026-02-27 03:54:50,292 | INFO     | job 7030821744 has completed (purged errors)
[2026-02-26 22:55:22] 2026-02-27 03:54:50,292 | INFO     | overall cleanup function is called
[2026-02-26 22:55:22] 2026-02-27 03:54:51,301 | INFO     | --- collectZombieJob: --- 10, [16531]
[2026-02-26 22:55:22] 2026-02-27 03:54:51,302 | INFO     | zombie collector waiting for pid 16531
[2026-02-26 22:55:22] 2026-02-27 03:54:51,302 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-26 22:55:22] 2026-02-27 03:54:51,302 | INFO     | collected zombie processes
[2026-02-26 22:55:22] 2026-02-27 03:54:51,302 | INFO     | will attempt to kill all subprocesses of pid=16531
[2026-02-26 22:55:22] 2026-02-27 03:54:51,396 | INFO     | process IDs to be killed: [16531] (in reverse order)
[2026-02-26 22:55:22] 2026-02-27 03:54:51,458 | WARNING  | found no corresponding commands to process id(s)
[2026-02-26 22:55:22] 2026-02-27 03:54:51,458 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-26 22:55:22] 2026-02-27 03:54:51,463 | INFO     | did not find any defunct processes belonging to 16531
[2026-02-26 22:55:22] 2026-02-27 03:54:51,466 | INFO     | did not find any defunct processes belonging to 16531
[2026-02-26 22:55:22] 2026-02-27 03:54:51,466 | INFO     | ready for new job
[2026-02-26 22:55:22] 2026-02-27 03:54:51,466 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-26 22:55:22] 2026-02-27 03:54:51,468 | INFO     | **************************************
[2026-02-26 22:55:22] 2026-02-27 03:54:51,468 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-26 22:55:22] 2026-02-27 03:54:51,468 | INFO     | **************************************
[2026-02-26 22:55:22] 2026-02-27 03:54:51,469 | INFO     | 
[2026-02-26 22:55:22] 2026-02-27 03:54:51,469 | INFO     | architecture information:
[2026-02-26 22:55:22] 2026-02-27 03:54:51,470 | INFO     | executing command: cat /etc/os-release
[2026-02-26 22:55:22] 2026-02-27 03:54:51,489 | INFO     | cat /etc/os-release:
[2026-02-26 22:55:22] NAME="CentOS Linux"
[2026-02-26 22:55:22] VERSION="7 (Core)"
[2026-02-26 22:55:22] ID="centos"
[2026-02-26 22:55:22] ID_LIKE="rhel fedora"
[2026-02-26 22:55:22] VERSION_ID="7"
[2026-02-26 22:55:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-26 22:55:22] ANSI_COLOR="0;31"
[2026-02-26 22:55:22] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-26 22:55:22] HOME_URL="https://www.centos.org/"
[2026-02-26 22:55:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-26 22:55:22] 
[2026-02-26 22:55:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-26 22:55:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-26 22:55:22] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-26 22:55:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-26 22:55:22] 
[2026-02-26 22:55:22] 2026-02-27 03:54:51,489 | INFO     | **************************************
[2026-02-26 22:55:22] 2026-02-27 03:54:51,992 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-02-26 22:55:22] 2026-02-27 03:54:52,013 | INFO     | sufficient remaining disk space (18384683008 B)
[2026-02-26 22:55:22] 2026-02-27 03:54:52,013 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-26 22:55:22] 2026-02-27 03:54:52,014 | INFO     | current server update state: UPDATING_FINAL
[2026-02-26 22:55:22] 2026-02-27 03:54:52,014 | INFO     | update_server=False
[2026-02-26 22:55:22] 2026-02-27 03:54:52,014 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-26 22:55:22] 2026-02-27 03:54:52,015 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-26 22:55:22] 2026-02-27 03:54:52,015 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-26 22:55:22] 2026-02-27 03:54:52,236 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-02-26 22:55:22] 2026-02-27 03:54:52,236 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-02-26 22:55:22] 2026-02-27 03:54:52,237 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-26 22:55:22] 2026-02-27 03:54:52,237 | INFO     | will abort loop
[2026-02-26 22:55:22] 2026-02-27 03:54:52,352 | INFO     | all job control threads have been joined
[2026-02-26 22:55:22] 2026-02-27 03:54:52,425 | INFO     | all data control threads have been joined
[2026-02-26 22:55:22] 2026-02-27 03:54:52,905 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-26 22:55:22] 2026-02-27 03:54:52,937 | INFO     | all payload control threads have been joined
[2026-02-26 22:55:22] 2026-02-27 03:54:53,020 | INFO     | [job] retrieve thread has finished
[2026-02-26 22:55:22] 2026-02-27 03:54:53,021 | INFO     | [job] queue monitor thread has finished
[2026-02-26 22:55:22] 2026-02-27 03:54:53,242 | INFO     | [job] job monitor thread has finished
[2026-02-26 22:55:22] 2026-02-27 03:54:53,357 | INFO     | [job] control thread has finished
[2026-02-26 22:55:22] 2026-02-27 03:54:53,381 | INFO     | [payload] validate_pre thread has finished
[2026-02-26 22:55:22] 2026-02-27 03:54:53,430 | INFO     | [data] control thread has finished
[2026-02-26 22:55:22] 2026-02-27 03:54:53,440 | INFO     | [data] copytool_in thread has finished
[2026-02-26 22:55:22] 2026-02-27 03:54:53,673 | INFO     | [payload] execute_payloads thread has finished
[2026-02-26 22:55:22] 2026-02-27 03:54:53,742 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-26 22:55:22] 2026-02-27 03:54:53,938 | INFO     | [payload] control thread has finished
[2026-02-26 22:55:22] 2026-02-27 03:54:54,012 | INFO     | [job] validate thread has finished
[2026-02-26 22:55:22] 2026-02-27 03:54:54,354 | INFO     | [job] create_data_payload thread has finished
[2026-02-26 22:55:22] 2026-02-27 03:54:54,392 | INFO     | [payload] validate_post thread has finished
[2026-02-26 22:55:22] 2026-02-27 03:54:54,451 | INFO     | [payload] failed_post thread has finished
[2026-02-26 22:55:22] 2026-02-27 03:54:54,910 | INFO     | [data] copytool_out thread has finished
[2026-02-26 22:55:22] 2026-02-27 03:54:56,021 | INFO     | [data] queue_monitor thread has finished
[2026-02-26 22:55:22] 2026-02-27 03:55:12,762 | INFO     | [monitor] cgroup control has ended
[2026-02-26 22:55:22] 2026-02-27 03:55:13,374 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140577536755520)>', '<ExcThread(monitor, started 140576359970560)>']
[2026-02-26 22:55:22] 2026-02-27 03:55:18,399 | INFO     | all workflow threads have been joined
[2026-02-26 22:55:22] 2026-02-27 03:55:18,407 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-26 22:55:22] 2026-02-27 03:55:18,407 | INFO     | traces error code: 0
[2026-02-26 22:55:22] 2026-02-27 03:55:18,407 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-26 22:55:22] 2026-02-27 03:55:21,995 | INFO     | PID=14038 has CPU usage=4.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-02-26 22:55:22] 2026-02-27 03:55:21,996 | INFO     | found 0 job(s) in 20 queues
[2026-02-26 22:55:22] 2026-02-27 03:55:21,996 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-26 22:55:22] 2026-02-27 03:55:21,996 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-26 22:55:22] 2026-02-27 03:55:21,996 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-26 22:55:22] 2026-02-27 03:55:21,996 | INFO     | [monitor] control thread has ended
[2026-02-26 22:55:22] 2026-02-27 03:55:22,119 [wrapper] ==== pilot stdout END ====
[2026-02-26 22:55:22] 2026-02-27 03:55:22,123 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-26 22:55:22] 2026-02-27 03:55:22,128 [wrapper] pilotpid: 14038
[2026-02-26 22:55:22] 2026-02-27 03:55:22,133 [wrapper] Pilot exit status: 0
[2026-02-26 22:55:22] 2026-02-27 03:55:22,152 [wrapper] pandaids: 7030821744 7030821744
[2026-02-26 22:55:22] 2026-02-27 03:55:22,198 [wrapper] cleanup supervisor_pilot  4897 14039
[2026-02-26 22:55:22] 2026-02-27 03:55:22,203 [wrapper] Test setup, not cleaning
[2026-02-26 22:55:22] 2026-02-27 03:55:22,207 [wrapper] apfmon messages muted
[2026-02-26 22:55:22] 2026-02-27 03:55:22,212 [wrapper] ==== wrapper stdout END ====
[2026-02-26 22:55:22] 2026-02-27 03:55:22,217 [wrapper] ==== wrapper stderr END ====
[2026-02-26 22:55:22]  *** Error codes and diagnostics ***
[2026-02-26 22:55:22]     "exeErrorCode": 0,
[2026-02-26 22:55:22]     "exeErrorDiag": "",
[2026-02-26 22:55:22]     "pilotErrorCode": 0,
[2026-02-26 22:55:22]     "pilotErrorDiag": "",
[2026-02-26 22:55:22]  *** Listing of results directory ***
[2026-02-26 22:55:22] total 764932
[2026-02-26 22:55:22] drwx------ 5 boincer umatlas      4096 Feb  2 10:00 pilot3
[2026-02-26 22:55:22] -rw-r--r-- 1 boincer umatlas    584627 Feb 26 11:50 pilot3.tar.gz
[2026-02-26 22:55:22] -rw-r--r-- 1 boincer umatlas      5111 Feb 26 11:53 queuedata.json
[2026-02-26 22:55:22] -rwx------ 1 boincer umatlas     36322 Feb 26 11:53 runpilot2-wrapper.sh
[2026-02-26 22:55:22] -rw-r--r-- 1 boincer umatlas       100 Feb 26 18:54 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-26 22:55:22] -rwxr-xr-x 1 boincer umatlas      7986 Feb 26 18:54 run_atlas
[2026-02-26 22:55:22] -rw-r--r-- 1 boincer umatlas       105 Feb 26 18:54 job.xml
[2026-02-26 22:55:22] -rw-r--r-- 3 boincer umatlas 282688673 Feb 26 18:54 EVNT.48449373._000002.pool.root.1
[2026-02-26 22:55:22] -rw-r--r-- 3 boincer umatlas 282688673 Feb 26 18:54 ATLAS.root_0
[2026-02-26 22:55:22] -rw-r--r-- 2 boincer umatlas     15845 Feb 26 18:54 start_atlas.sh
[2026-02-26 22:55:22] drwxrwx--x 2 boincer umatlas      4096 Feb 26 18:54 shared
[2026-02-26 22:55:22] -rw-r--r-- 2 boincer umatlas    597972 Feb 26 18:54 input.tar.gz
[2026-02-26 22:55:22] -rw-r--r-- 1 boincer umatlas         0 Feb 26 18:54 boinc_lockfile
[2026-02-26 22:55:22] -rw-r--r-- 1 boincer umatlas      2603 Feb 26 20:27 pandaJob.out
[2026-02-26 22:55:22] -rw------- 1 boincer umatlas        57 Feb 26 20:27 setup.sh.local
[2026-02-26 22:55:22] -rw------- 1 boincer umatlas    998489 Feb 26 20:27 agis_schedconf.cvmfs.json
[2026-02-26 22:55:22] -rw------- 1 boincer umatlas       432 Feb 26 20:27 workernode_map.json
[2026-02-26 22:55:22] -rw-r--r-- 1 boincer umatlas      5912 Feb 26 22:45 init_data.xml
[2026-02-26 22:55:22] -rw------- 1 boincer umatlas 210746131 Feb 26 22:54 HITS.48842817._000041.pool.root.1
[2026-02-26 22:55:22] -rw-r--r-- 1 boincer umatlas       533 Feb 26 22:54 boinc_task_state.xml
[2026-02-26 22:55:22] -rw------- 1 boincer umatlas      1062 Feb 26 22:54 memory_monitor_summary.json
[2026-02-26 22:55:22] -rw------- 1 boincer umatlas   1513015 Feb 26 22:54 agis_ddmendpoints.agis.ALL.json
[2026-02-26 22:55:22] -rw------- 1 boincer umatlas    389379 Feb 26 22:54 log.48842817._000041.job.log.tgz.1
[2026-02-26 22:55:22] -rw------- 1 boincer umatlas      6395 Feb 26 22:54 heartbeat.json
[2026-02-26 22:55:22] -rw-r--r-- 1 boincer umatlas      8192 Feb 26 22:55 boinc_mmap_file
[2026-02-26 22:55:22] -rw-r--r-- 1 boincer umatlas        29 Feb 26 22:55 wrapper_checkpoint.txt
[2026-02-26 22:55:22] -rw------- 1 boincer umatlas        96 Feb 26 22:55 pilot_heartbeat.json
[2026-02-26 22:55:22] -rw------- 1 boincer umatlas       745 Feb 26 22:55 pilotlog.txt
[2026-02-26 22:55:22] -rw------- 1 boincer umatlas   1235369 Feb 26 22:55 log.48842817._000041.job.log.1
[2026-02-26 22:55:22] -rw------- 1 boincer umatlas       357 Feb 26 22:55 output.list
[2026-02-26 22:55:22] -rw-r--r-- 1 boincer umatlas       620 Feb 26 22:55 runtime_log
[2026-02-26 22:55:22] -rw------- 1 boincer umatlas   1638400 Feb 26 22:55 result.tar.gz
[2026-02-26 22:55:22] -rw-r--r-- 1 boincer umatlas      9426 Feb 26 22:55 runtime_log.err
[2026-02-26 22:55:22] -rw------- 1 boincer umatlas       784 Feb 26 22:55 Ri7NDmfntF9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmFT3KDmbJVLqm.diag
[2026-02-26 22:55:22] -rw-r--r-- 1 boincer umatlas     23387 Feb 26 22:55 stderr.txt
[2026-02-26 22:55:22] HITS file was successfully produced:
[2026-02-26 22:55:22] -rw------- 1 boincer umatlas 210746131 Feb 26 22:54 shared/HITS.pool.root.1
[2026-02-26 22:55:22]  *** Contents of shared directory: ***
[2026-02-26 22:55:22] total 484072
[2026-02-26 22:55:22] -rw-r--r-- 3 boincer umatlas 282688673 Feb 26 18:54 ATLAS.root_0
[2026-02-26 22:55:22] -rw-r--r-- 2 boincer umatlas     15845 Feb 26 18:54 start_atlas.sh
[2026-02-26 22:55:22] -rw-r--r-- 2 boincer umatlas    597972 Feb 26 18:54 input.tar.gz
[2026-02-26 22:55:22] -rw------- 1 boincer umatlas 210746131 Feb 26 22:54 HITS.pool.root.1
[2026-02-26 22:55:22] -rw------- 1 boincer umatlas   1638400 Feb 26 22:55 result.tar.gz
22:55:23 (10311): run_atlas exited; CPU time 65755.496324
22:55:23 (10311): called boinc_finish(0)

</stderr_txt>
]]>

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