Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:05:59 (1288734): wrapper (7.7.26015): starting
00:05:59 (1288734): wrapper: running run_atlas (--nthreads 11)
[2026-02-27 00:05:59] Arguments: --nthreads 11
[2026-02-27 00:05:59] Threads: 11
[2026-02-27 00:05:59] Checking for CVMFS
[2026-02-27 00:06:00] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-27 00:06:01] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-27 00:06:01] Running cvmfs_config stat atlas.cern.ch
[2026-02-27 00:06:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-27 00:06:03] 2.13.3.0 11393 163529 555808 156682 2 347 24711023 32935937 25671 16776704 0 430903643 99.383 722139664 40146 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-02-27 00:06:03] CVMFS is ok
[2026-02-27 00:06:03] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-27 00:06:03] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-27 00:06:03] Further information can be found at the LHC@home message board.
[2026-02-27 00:06:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-27 00:06:03] Checking for apptainer binary...
[2026-02-27 00:06:03] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-27 00:06:03] Running /usr/bin/apptainer --version
[2026-02-27 00:06:03] apptainer version 1.4.5-2.el9
[2026-02-27 00:06:03] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-27 00:06:04] c6-5-37-2.aglt2.org
[2026-02-27 00:06:04] apptainer works
[2026-02-27 00:06:04] Set ATHENA_PROC_NUMBER=11
[2026-02-27 00:06:04] Set ATHENA_CORE_NUMBER=11
[2026-02-27 00:06:04] Starting ATLAS job with PandaID=7031077371
[2026-02-27 00:06:04] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-27 16:00:50]  *** The last 200 lines of the pilot log: ***
[2026-02-27 16:00:50] 2026-02-27 20:59:51,425 | INFO     | job 7031077371 has finished - writing final server update
[2026-02-27 16:00:50] 2026-02-27 20:59:51,425 | INFO     | total number of processed events: 400 (read)
[2026-02-27 16:00:50] 2026-02-27 20:59:51,467 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-7031077371/memory_monitor_summary.json (trf name=prmon)
[2026-02-27 16:00:50] 2026-02-27 20:59:51,468 | INFO     | extracted standard info from prmon json
[2026-02-27 16:00:50] 2026-02-27 20:59:51,468 | INFO     | extracted standard memory fields from prmon json
[2026-02-27 16:00:50] 2026-02-27 20:59:51,468 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-27 16:00:50] 2026-02-27 20:59:51,468 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-27 16:00:50] 2026-02-27 20:59:51,469 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-27 16:00:50] 2026-02-27 20:59:51,542 | INFO     | fitting pss+swap vs Time
[2026-02-27 16:00:50] 2026-02-27 20:59:51,578 | INFO     | sum of square deviations: 251825481136.8292
[2026-02-27 16:00:50] 2026-02-27 20:59:51,776 | INFO     | sum of deviations: 476616831410.2857
[2026-02-27 16:00:50] 2026-02-27 20:59:51,776 | INFO     | mean x: 1772197493.550911
[2026-02-27 16:00:50] 2026-02-27 20:59:51,776 | INFO     | mean y: 2680960.193997856
[2026-02-27 16:00:50] 2026-02-27 20:59:51,777 | INFO     | intersect: -3351463942.8412137
[2026-02-27 16:00:50] 2026-02-27 20:59:51,780 | INFO     | chi2: 5.08250226015594
[2026-02-27 16:00:50] 2026-02-27 20:59:51,786 | INFO     | sum of square deviations: 247798436815.30576
[2026-02-27 16:00:50] 2026-02-27 20:59:51,911 | INFO     | sum of deviations: 602677215596.2329
[2026-02-27 16:00:50] 2026-02-27 20:59:51,912 | INFO     | mean x: 1772197341.0538793
[2026-02-27 16:00:50] 2026-02-27 20:59:51,912 | INFO     | mean y: 2685717.9353448274
[2026-02-27 16:00:50] 2026-02-27 20:59:51,912 | INFO     | intersect: -4307522904.52449
[2026-02-27 16:00:50] 2026-02-27 20:59:51,913 | INFO     | chi2: 3.6497519657244037
[2026-02-27 16:00:50] 2026-02-27 20:59:51,913 | INFO     | current chi2=3.6497519657244037 (change=28.18986044853381 %)
[2026-02-27 16:00:50] 2026-02-27 20:59:51,935 | INFO     | sum of square deviations: 243814556093.7642
[2026-02-27 16:00:50] 2026-02-27 20:59:52,164 | INFO     | sum of deviations: 597379905606.5825
[2026-02-27 16:00:50] 2026-02-27 20:59:52,164 | INFO     | mean x: 1772197188.5568798
[2026-02-27 16:00:50] 2026-02-27 20:59:52,164 | INFO     | mean y: 2685515.1603466957
[2026-02-27 16:00:50] 2026-02-27 20:59:52,165 | INFO     | intersect: -4339446497.701196
[2026-02-27 16:00:50] 2026-02-27 20:59:52,197 | INFO     | chi2: 3.6499477880580504
[2026-02-27 16:00:50] 2026-02-27 20:59:52,198 | INFO     | current chi2=3.6499477880580504 (change=-0.005365360043249162 %)
[2026-02-27 16:00:50] 2026-02-27 20:59:52,198 | INFO     | right removable region: 922
[2026-02-27 16:00:50] 2026-02-27 20:59:52,199 | INFO     | sum of square deviations: 247798123275.30582
[2026-02-27 16:00:50] 2026-02-27 20:59:52,420 | INFO     | sum of deviations: 189047854945.1573
[2026-02-27 16:00:50] 2026-02-27 20:59:52,434 | INFO     | mean x: 1772197646.0538793
[2026-02-27 16:00:50] 2026-02-27 20:59:52,434 | INFO     | mean y: 2691841.136853448
[2026-02-27 16:00:50] 2026-02-27 20:59:52,434 | INFO     | intersect: -1349336814.677951
[2026-02-27 16:00:50] 2026-02-27 20:59:52,435 | INFO     | chi2: 2.0262595728950537
[2026-02-27 16:00:50] 2026-02-27 20:59:52,435 | INFO     | current chi2=2.0262595728950537 (change=60.13263803579923 %)
[2026-02-27 16:00:50] 2026-02-27 20:59:52,447 | INFO     | sum of square deviations: 243813985499.87637
[2026-02-27 16:00:50] 2026-02-27 20:59:52,557 | INFO     | sum of deviations: 82043973258.96423
[2026-02-27 16:00:50] 2026-02-27 20:59:52,558 | INFO     | mean x: 1772197798.5557964
[2026-02-27 16:00:50] 2026-02-27 20:59:52,558 | INFO     | mean y: 2695935.6608884074
[2026-02-27 16:00:50] 2026-02-27 20:59:52,558 | INFO     | intersect: -593652745.8809289
[2026-02-27 16:00:50] 2026-02-27 20:59:52,588 | INFO     | chi2: 1.6416891950301196
[2026-02-27 16:00:50] 2026-02-27 20:59:52,588 | INFO     | current chi2=1.6416891950301196 (change=18.97932441673662 %)
[2026-02-27 16:00:50] 2026-02-27 20:59:52,588 | INFO     | left removable region: 20
[2026-02-27 16:00:50] 2026-02-27 20:59:52,589 | INFO     | sum of square deviations: 227547491282.52487
[2026-02-27 16:00:50] 2026-02-27 20:59:52,686 | INFO     | sum of deviations: 122874769437.9868
[2026-02-27 16:00:50] 2026-02-27 20:59:52,686 | INFO     | mean x: 1772197768.0620842
[2026-02-27 16:00:50] 2026-02-27 20:59:52,690 | INFO     | mean y: 2703944.9645232814
[2026-02-27 16:00:50] 2026-02-27 20:59:52,691 | INFO     | intersect: -954276028.4106733
[2026-02-27 16:00:50] 2026-02-27 20:59:52,692 | INFO     | chi2: 0.023017888043343572
[2026-02-27 16:00:50] 2026-02-27 20:59:52,692 | INFO     | current memory leak: 0.54 B/s (using 902 data points, chi2=0.02)
[2026-02-27 16:00:50] 2026-02-27 20:59:52,694 | INFO     | could have reported an average CPU frequency of 3169 MHz (35 samples)
[2026-02-27 16:00:50] 2026-02-27 20:59:52,694 | INFO     | ..............................
[2026-02-27 16:00:50] 2026-02-27 20:59:52,694 | INFO     | . Timing measurements:
[2026-02-27 16:00:50] 2026-02-27 20:59:52,694 | INFO     | . get job = 0 s
[2026-02-27 16:00:50] 2026-02-27 20:59:52,694 | INFO     | . initial setup = 75 s
[2026-02-27 16:00:50] 2026-02-27 20:59:52,694 | INFO     | . payload setup = 44 s
[2026-02-27 16:00:50] 2026-02-27 20:59:52,694 | INFO     | . stage-in = 0 s
[2026-02-27 16:00:50] 2026-02-27 20:59:52,694 | INFO     | . payload execution = 56935 s
[2026-02-27 16:00:50] 2026-02-27 20:59:52,694 | INFO     | . stage-out = 7 s
[2026-02-27 16:00:50] 2026-02-27 20:59:52,694 | INFO     | . log creation = 0 s
[2026-02-27 16:00:50] 2026-02-27 20:59:52,700 | INFO     | ..............................
[2026-02-27 16:00:50] 2026-02-27 20:59:53,068 | INFO     | 
[2026-02-27 16:00:50] 2026-02-27 20:59:53,068 | INFO     | job summary report
[2026-02-27 16:00:50] 2026-02-27 20:59:53,069 | INFO     | --------------------------------------------------
[2026-02-27 16:00:50] 2026-02-27 20:59:53,069 | INFO     | PanDA job id: 7031077371
[2026-02-27 16:00:50] 2026-02-27 20:59:53,069 | INFO     | task id: 48838416
[2026-02-27 16:00:50] 2026-02-27 20:59:53,069 | INFO     | errors: (none)
[2026-02-27 16:00:50] 2026-02-27 20:59:53,069 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-27 16:00:50] 2026-02-27 20:59:53,069 | INFO     | pilot state: finished 
[2026-02-27 16:00:50] 2026-02-27 20:59:53,069 | INFO     | transexitcode: 0
[2026-02-27 16:00:50] 2026-02-27 20:59:53,069 | INFO     | exeerrorcode: 0
[2026-02-27 16:00:50] 2026-02-27 20:59:53,069 | INFO     | exeerrordiag: 
[2026-02-27 16:00:50] 2026-02-27 20:59:53,069 | INFO     | exitcode: 0
[2026-02-27 16:00:50] 2026-02-27 20:59:53,069 | INFO     | exitmsg: OK
[2026-02-27 16:00:50] 2026-02-27 20:59:53,069 | INFO     | cpuconsumptiontime: 47581 s
[2026-02-27 16:00:50] 2026-02-27 20:59:53,069 | INFO     | nevents: 400
[2026-02-27 16:00:50] 2026-02-27 20:59:53,076 | INFO     | neventsw: 0
[2026-02-27 16:00:50] 2026-02-27 20:59:53,076 | INFO     | pid: 1314680
[2026-02-27 16:00:50] 2026-02-27 20:59:53,076 | INFO     | pgrp: 1314680
[2026-02-27 16:00:50] 2026-02-27 20:59:53,076 | INFO     | corecount: 11
[2026-02-27 16:00:50] 2026-02-27 20:59:53,076 | INFO     | event service: False
[2026-02-27 16:00:50] 2026-02-27 20:59:53,076 | INFO     | sizes: {0: 2281846, 1: 2282307, 12: 2282307, 56985: 2330637, 56994: 2339635, 56996: 2339691, 56999: 2340013}
[2026-02-27 16:00:50] 2026-02-27 20:59:53,076 | INFO     | --------------------------------------------------
[2026-02-27 16:00:50] 2026-02-27 20:59:53,076 | INFO     | 
[2026-02-27 16:00:50] 2026-02-27 20:59:53,076 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2026-02-27 16:00:50] 2026-02-27 20:59:53,134 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-27 16:00:50] 2026-02-27 20:59:53,134 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-27 16:00:50] 2026-02-27 20:59:53,134 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-27 16:00:50] 2026-02-27 20:59:53,135 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-27 16:00:50] 2026-02-27 20:59:53,135 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-27 16:00:50] 2026-02-27 20:59:53,135 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-27 16:00:50] 2026-02-27 20:59:53,135 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-27 16:00:50] 2026-02-27 20:59:53,135 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-27 16:00:50] 2026-02-27 20:59:53,135 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-27 16:00:50] 2026-02-27 20:59:53,135 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-27 16:00:50] 2026-02-27 20:59:53,135 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-27 16:00:50] 2026-02-27 20:59:53,135 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-27 16:00:50] 2026-02-27 20:59:53,135 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-27 16:00:50] 2026-02-27 20:59:53,135 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-27 16:00:50] 2026-02-27 20:59:53,135 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-27 16:00:50] 2026-02-27 20:59:53,135 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-27 16:00:50] 2026-02-27 20:59:53,135 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-27 16:00:50] 2026-02-27 20:59:53,136 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-27 16:00:50] 2026-02-27 20:59:53,136 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-27 16:00:50] 2026-02-27 20:59:53,136 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-27 16:00:50] 2026-02-27 20:59:53,136 | INFO     | job 7031077371 has completed (purged errors)
[2026-02-27 16:00:50] 2026-02-27 20:59:53,136 | INFO     | overall cleanup function is called
[2026-02-27 16:00:50] 2026-02-27 20:59:54,239 | INFO     | --- collectZombieJob: --- 10, [1314680]
[2026-02-27 16:00:50] 2026-02-27 20:59:54,240 | INFO     | zombie collector waiting for pid 1314680
[2026-02-27 16:00:50] 2026-02-27 20:59:54,240 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-27 16:00:50] 2026-02-27 20:59:54,240 | INFO     | collected zombie processes
[2026-02-27 16:00:50] 2026-02-27 20:59:54,240 | INFO     | will attempt to kill all subprocesses of pid=1314680
[2026-02-27 16:00:50] 2026-02-27 20:59:55,918 | INFO     | PID=1298493 has CPU usage=12.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-02-27 16:00:50] 2026-02-27 20:59:55,919 | INFO     | .. there are 37 such processes running
[2026-02-27 16:00:50] 2026-02-27 20:59:57,567 | INFO     | process IDs to be killed: [1314680] (in reverse order)
[2026-02-27 16:00:50] 2026-02-27 20:59:58,437 | WARNING  | found no corresponding commands to process id(s)
[2026-02-27 16:00:50] 2026-02-27 20:59:58,439 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-27 16:00:50] 2026-02-27 20:59:58,566 | INFO     | did not find any defunct processes belonging to 1314680
[2026-02-27 16:00:50] 2026-02-27 20:59:58,698 | INFO     | did not find any defunct processes belonging to 1314680
[2026-02-27 16:00:50] 2026-02-27 20:59:58,704 | INFO     | ready for new job
[2026-02-27 16:00:50] 2026-02-27 20:59:58,705 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-27 16:00:50] 2026-02-27 20:59:58,722 | INFO     | **************************************
[2026-02-27 16:00:50] 2026-02-27 20:59:58,722 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-27 16:00:50] 2026-02-27 20:59:58,723 | INFO     | **************************************
[2026-02-27 16:00:50] 2026-02-27 20:59:58,723 | INFO     | 
[2026-02-27 16:00:50] 2026-02-27 20:59:58,765 | INFO     | architecture information:
[2026-02-27 16:00:50] 2026-02-27 20:59:58,776 | INFO     | executing command: cat /etc/os-release
[2026-02-27 16:00:50] 2026-02-27 20:59:58,980 | INFO     | cat /etc/os-release:
[2026-02-27 16:00:50] NAME="CentOS Linux"
[2026-02-27 16:00:50] VERSION="7 (Core)"
[2026-02-27 16:00:50] ID="centos"
[2026-02-27 16:00:50] ID_LIKE="rhel fedora"
[2026-02-27 16:00:50] VERSION_ID="7"
[2026-02-27 16:00:50] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-27 16:00:50] ANSI_COLOR="0;31"
[2026-02-27 16:00:50] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-27 16:00:50] HOME_URL="https://www.centos.org/"
[2026-02-27 16:00:50] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-27 16:00:50] 
[2026-02-27 16:00:50] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-27 16:00:50] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-27 16:00:50] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-27 16:00:50] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-27 16:00:50] 
[2026-02-27 16:00:50] 2026-02-27 20:59:58,980 | INFO     | **************************************
[2026-02-27 16:00:50] 2026-02-27 20:59:59,484 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2026-02-27 16:00:50] 2026-02-27 20:59:59,529 | INFO     | sufficient remaining disk space (75283562496 B)
[2026-02-27 16:00:50] 2026-02-27 20:59:59,529 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-27 16:00:50] 2026-02-27 20:59:59,530 | INFO     | current server update state: UPDATING_FINAL
[2026-02-27 16:00:50] 2026-02-27 20:59:59,530 | INFO     | update_server=False
[2026-02-27 16:00:50] 2026-02-27 20:59:59,530 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-27 16:00:50] 2026-02-27 20:59:59,530 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-27 16:00:50] 2026-02-27 20:59:59,618 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-27 16:00:50] 2026-02-27 20:59:59,619 | INFO     | aborting loop
[2026-02-27 16:00:50] 2026-02-27 20:59:59,735 | INFO     | all data control threads have been joined
[2026-02-27 16:00:50] 2026-02-27 21:00:00,141 | INFO     | all payload control threads have been joined
[2026-02-27 16:00:50] 2026-02-27 21:00:00,254 | INFO     | all job control threads have been joined
[2026-02-27 16:00:50] 2026-02-27 21:00:00,536 | INFO     | [job] retrieve thread has finished
[2026-02-27 16:00:50] 2026-02-27 21:00:00,625 | INFO     | [job] job monitor thread has finished
[2026-02-27 16:00:50] 2026-02-27 21:00:00,742 | INFO     | [data] control thread has finished
[2026-02-27 16:00:50] 2026-02-27 21:00:00,888 | INFO     | [payload] validate_post thread has finished
[2026-02-27 16:00:50] 2026-02-27 21:00:00,966 | INFO     | [job] validate thread has finished
[2026-02-27 16:00:50] 2026-02-27 21:00:01,005 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-27 16:00:50] 2026-02-27 21:00:01,135 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-27 16:00:50] 2026-02-27 21:00:01,147 | INFO     | [payload] control thread has finished
[2026-02-27 16:00:50] 2026-02-27 21:00:01,152 | INFO     | [payload] validate_pre thread has finished
[2026-02-27 16:00:50] 2026-02-27 21:00:01,261 | INFO     | [job] control thread has finished
[2026-02-27 16:00:50] 2026-02-27 21:00:01,307 | INFO     | [payload] failed_post thread has finished
[2026-02-27 16:00:50] 2026-02-27 21:00:01,484 | INFO     | [job] create_data_payload thread has finished
[2026-02-27 16:00:50] 2026-02-27 21:00:01,484 | INFO     | [data] copytool_in thread has finished
[2026-02-27 16:00:50] 2026-02-27 21:00:01,538 | INFO     | [data] copytool_out thread has finished
[2026-02-27 16:00:50] 2026-02-27 21:00:01,783 | INFO     | [payload] execute_payloads thread has finished
[2026-02-27 16:00:50] 2026-02-27 21:00:02,136 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-27 16:00:50] 2026-02-27 21:00:03,143 | INFO     | [job] queue monitor thread has finished
[2026-02-27 16:00:50] 2026-02-27 21:00:05,061 | INFO     | [data] queue_monitor thread has finished
[2026-02-27 16:00:50] 2026-02-27 21:00:29,562 | INFO     | PID=1298493 has CPU usage=3.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-27 16:00:50] 2026-02-27 21:00:29,563 | INFO     | .. there are 37 such processes running
[2026-02-27 16:00:50] 2026-02-27 21:00:29,563 | INFO     | found 0 job(s) in 20 queues
[2026-02-27 16:00:50] 2026-02-27 21:00:29,563 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-27 16:00:50] 2026-02-27 21:00:29,564 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-27 16:00:50] 2026-02-27 21:00:39,563 | INFO     | [monitor] cgroup control has ended
[2026-02-27 16:00:50] 2026-02-27 21:00:41,062 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140396398454592)>', '<ExcThread(monitor, started 140395635799808)>']
[2026-02-27 16:00:50] 2026-02-27 21:00:41,636 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-27 16:00:50] 2026-02-27 21:00:41,637 | INFO     | [monitor] control thread has ended
[2026-02-27 16:00:50] 2026-02-27 21:00:46,110 | INFO     | all workflow threads have been joined
[2026-02-27 16:00:50] 2026-02-27 21:00:46,111 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-27 16:00:50] 2026-02-27 21:00:46,111 | INFO     | traces error code: 0
[2026-02-27 16:00:50] 2026-02-27 21:00:46,111 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-27 16:00:50] 2026-02-27 21:00:48,206 [wrapper] ==== pilot stdout END ====
[2026-02-27 16:00:50] 2026-02-27 21:00:48,322 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-27 16:00:50] 2026-02-27 21:00:48,367 [wrapper] pilotpid: 1298493
[2026-02-27 16:00:50] 2026-02-27 21:00:48,433 [wrapper] Pilot exit status: 0
[2026-02-27 16:00:50] 2026-02-27 21:00:48,677 [wrapper] pandaids: 7031077371
[2026-02-27 16:00:50] 2026-02-27 21:00:49,295 [wrapper] cleanup supervisor_pilot   38361 1298494
[2026-02-27 16:00:50] 2026-02-27 21:00:49,333 [wrapper] Test setup, not cleaning
[2026-02-27 16:00:50] 2026-02-27 21:00:49,390 [wrapper] apfmon messages muted
[2026-02-27 16:00:50] 2026-02-27 21:00:49,407 [wrapper] ==== wrapper stdout END ====
[2026-02-27 16:00:50] 2026-02-27 21:00:49,488 [wrapper] ==== wrapper stderr END ====
[2026-02-27 16:00:50]  *** Error codes and diagnostics ***
[2026-02-27 16:00:50]     "exeErrorCode": 0,
[2026-02-27 16:00:50]     "exeErrorDiag": "",
[2026-02-27 16:00:50]     "pilotErrorCode": 0,
[2026-02-27 16:00:50]     "pilotErrorDiag": "",
[2026-02-27 16:00:50]  *** Listing of results directory ***
[2026-02-27 16:00:50] total 522176
[2026-02-27 16:00:50] -rwx------. 1 boincer umatlas     36322 Feb 26 16:51 runpilot2-wrapper.sh
[2026-02-27 16:00:50] -rw-r--r--. 1 boincer umatlas    584627 Feb 26 16:52 pilot3.tar.gz
[2026-02-27 16:00:50] -rw-r--r--. 1 boincer umatlas      5111 Feb 26 16:55 queuedata.json
[2026-02-27 16:00:50] -rw-r--r--. 1 boincer umatlas       100 Feb 27 00:05 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-27 16:00:50] -rwxr-xr-x. 1 boincer umatlas      7986 Feb 27 00:05 run_atlas
[2026-02-27 16:00:50] -rw-r--r--. 1 boincer umatlas       105 Feb 27 00:05 job.xml
[2026-02-27 16:00:50] -rw-r--r--. 2 boincer umatlas 290888054 Feb 27 00:05 EVNT.48220085._000248.pool.root.1
[2026-02-27 16:00:50] -rw-r--r--. 2 boincer umatlas     15845 Feb 27 00:05 start_atlas.sh
[2026-02-27 16:00:50] drwxrwx--x. 2 boincer umatlas      4096 Feb 27 00:05 shared
[2026-02-27 16:00:50] -rw-r--r--. 2 boincer umatlas    597974 Feb 27 00:05 input.tar.gz
[2026-02-27 16:00:50] -rw-r--r--. 1 boincer umatlas         0 Feb 27 00:05 boinc_lockfile
[2026-02-27 16:00:50] -rw-r--r--. 1 boincer umatlas      2567 Feb 27 00:06 pandaJob.out
[2026-02-27 16:00:50] -rw-------. 1 boincer umatlas        57 Feb 27 00:06 setup.sh.local
[2026-02-27 16:00:50] -rw-------. 1 boincer umatlas       442 Feb 27 00:09 workernode_map.json
[2026-02-27 16:00:50] -rw-------. 1 boincer umatlas    998489 Feb 27 00:09 agis_schedconf.cvmfs.json
[2026-02-27 16:00:50] drwx------. 5 boincer umatlas      4096 Feb 27 00:09 pilot3
[2026-02-27 16:00:50] -rw-r--r--. 1 boincer umatlas      6842 Feb 27 15:54 init_data.xml
[2026-02-27 16:00:50] -rw-------. 1 boincer umatlas 226033852 Feb 27 15:57 HITS.48838416._006039.pool.root.1
[2026-02-27 16:00:50] -rw-r--r--. 1 boincer umatlas       531 Feb 27 15:57 boinc_task_state.xml
[2026-02-27 16:00:50] -rw-------. 1 boincer umatlas      1041 Feb 27 15:59 memory_monitor_summary.json
[2026-02-27 16:00:50] -rw-------. 1 boincer umatlas   1513015 Feb 27 15:59 agis_ddmendpoints.agis.ALL.json
[2026-02-27 16:00:50] -rw-------. 1 boincer umatlas    961885 Feb 27 15:59 log.48838416._006039.job.log.tgz.1
[2026-02-27 16:00:50] -rw-------. 1 boincer umatlas      6391 Feb 27 15:59 heartbeat.json
[2026-02-27 16:00:50] -rw-------. 1 boincer umatlas        95 Feb 27 16:00 pilot_heartbeat.json
[2026-02-27 16:00:50] -rw-r--r--. 1 boincer umatlas      8192 Feb 27 16:00 boinc_mmap_file
[2026-02-27 16:00:50] -rw-------. 1 boincer umatlas      4820 Feb 27 16:00 pilotlog.txt
[2026-02-27 16:00:50] -rw-r--r--. 1 boincer umatlas        28 Feb 27 16:00 wrapper_checkpoint.txt
[2026-02-27 16:00:50] -rw-------. 1 boincer umatlas   5963832 Feb 27 16:00 log.48838416._006039.job.log.1
[2026-02-27 16:00:50] -rw-------. 1 boincer umatlas       357 Feb 27 16:00 output.list
[2026-02-27 16:00:50] -rw-r--r--. 1 boincer umatlas       620 Feb 27 16:00 runtime_log
[2026-02-27 16:00:50] -rw-------. 1 boincer umatlas   6942720 Feb 27 16:00 result.tar.gz
[2026-02-27 16:00:50] -rw-r--r--. 1 boincer umatlas      9349 Feb 27 16:00 runtime_log.err
[2026-02-27 16:00:50] -rw-------. 1 boincer umatlas       658 Feb 27 16:00 K2CNDmdRyF9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDm3v3KDmYNvldm.diag
[2026-02-27 16:00:50] -rw-r--r--. 1 boincer umatlas     21248 Feb 27 16:00 stderr.txt
[2026-02-27 16:00:50] HITS file was successfully produced:
[2026-02-27 16:00:50] -rw-------. 1 boincer umatlas 226033852 Feb 27 15:57 shared/HITS.pool.root.1
[2026-02-27 16:00:50]  *** Contents of shared directory: ***
[2026-02-27 16:00:50] total 512200
[2026-02-27 16:00:50] -rw-r--r--. 2 boincer umatlas 290888054 Feb 27 00:05 ATLAS.root_0
[2026-02-27 16:00:50] -rw-r--r--. 2 boincer umatlas     15845 Feb 27 00:05 start_atlas.sh
[2026-02-27 16:00:50] -rw-r--r--. 2 boincer umatlas    597974 Feb 27 00:05 input.tar.gz
[2026-02-27 16:00:50] -rw-------. 1 boincer umatlas 226033852 Feb 27 15:57 HITS.pool.root.1
[2026-02-27 16:00:50] -rw-------. 1 boincer umatlas   6942720 Feb 27 16:00 result.tar.gz
16:00:52 (1288734): run_atlas exited; CPU time 49786.575341
16:00:52 (1288734): called boinc_finish(0)

</stderr_txt>
]]>

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