Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
2026-02-26 22:07:04 (27369): vboxwrapper version 26210
2026-02-26 22:07:04 (27369): BOINC client version: 8.2.8
2026-02-26 22:07:04 (27369): Detected: VirtualBox VboxManage Interface (Version: 7.2.6)
2026-02-26 22:07:04 (27369): Successfully copied 'init_data.xml' to the shared directory.
2026-02-26 22:07:04 (27369): Create VM. (boinc_0afba74c497d173b, slot#2)
2026-02-26 22:07:04 (27369): Setting Memory Size for VM. (4100MB)
2026-02-26 22:07:04 (27369): Setting CPU Count for VM. (1)
2026-02-26 22:07:04 (27369): Setting Chipset Options for VM.
2026-02-26 22:07:04 (27369): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-02-26 22:07:04 (27369): Setting Boot Options for VM.
2026-02-26 22:07:05 (27369): Setting Network Configuration for NAT. (Driver: virtio)
2026-02-26 22:07:05 (27369): Enabling VM Network Access.
2026-02-26 22:07:05 (27369): Disabling USB Support for VM.
2026-02-26 22:07:05 (27369): Disabling COM Port Support for VM.
2026-02-26 22:07:05 (27369): Disabling LPT Port Support for VM.
2026-02-26 22:07:05 (27369): Disabling Audio Support for VM.
2026-02-26 22:07:05 (27369): Disabling Clipboard Support for VM.
2026-02-26 22:07:05 (27369): Disabling Drag and Drop Support for VM.
2026-02-26 22:07:05 (27369): Adding storage controller(s) to VM.
2026-02-26 22:07:05 (27369): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-02-26 22:07:06 (27369): Adding VirtualBox Guest Additions to VM.
2026-02-26 22:07:06 (27369): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-02-26 22:07:06 (27369): forwarding host port 49453 to guest port 80
2026-02-26 22:07:06 (27369): Enabling remote desktop for VM.
2026-02-26 22:07:06 (27369): Required extension pack not installed, remote desktop not enabled.
2026-02-26 22:07:06 (27369): Enabling shared directory for VM.
2026-02-26 22:07:06 (27369): Starting VM using VBoxManage interface. (boinc_0afba74c497d173b, slot#2)
2026-02-26 22:07:07 (27369): Successfully started VM. (PID = '27988')
2026-02-26 22:07:07 (27369): Reporting VM Process ID to BOINC.
2026-02-26 22:07:07 (27369): Guest Log: BIOS: VirtualBox 7.2.6
2026-02-26 22:07:07 (27369): Guest Log: CPUID EDX: 0x178bfbff
2026-02-26 22:07:07 (27369): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-02-26 22:07:07 (27369): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-02-26 22:07:07 (27369): VM state change detected. (old = 'poweredoff', new = 'running')
2026-02-26 22:07:07 (27369): Detected: Web Application Enabled (http://localhost:49453)
2026-02-26 22:07:07 (27369): Preference change detected
2026-02-26 22:07:07 (27369): Setting CPU throttle for VM. (100%)
2026-02-26 22:07:07 (27369): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-02-26 22:07:09 (27369): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-02-26 22:07:09 (27369): Guest Log: BIOS: Booting from Hard Disk...
2026-02-26 22:07:12 (27369): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-02-26 22:07:12 (27369): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-02-26 22:07:12 (27369): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-02-26 22:07:12 (27369): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-02-26 22:07:12 (27369): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-02-26 22:07:12 (27369): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-02-26 22:07:12 (27369): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-02-26 22:07:12 (27369): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-02-26 22:07:12 (27369): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-02-26 22:07:12 (27369): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-02-26 22:07:12 (27369): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-02-26 22:07:12 (27369): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-02-26 22:07:12 (27369): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-02-26 22:07:12 (27369): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-02-26 22:07:12 (27369): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-02-26 22:07:12 (27369): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-02-26 22:07:12 (27369): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-02-26 22:07:12 (27369): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-02-26 22:07:12 (27369): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-02-26 22:07:12 (27369): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-02-26 22:07:12 (27369): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-02-26 22:07:12 (27369): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-02-26 22:07:12 (27369): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-02-26 22:07:12 (27369): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-02-26 22:07:12 (27369): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-02-26 22:07:12 (27369): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-02-26 22:07:12 (27369): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-02-26 22:07:12 (27369): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-02-26 22:07:12 (27369): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-02-26 22:07:12 (27369): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-02-26 22:07:12 (27369): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-02-26 22:07:12 (27369): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-02-26 22:07:16 (27369): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-02-26 22:07:16 (27369): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-02-26 22:07:26 (27369): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-02-26 22:07:26 (27369): Guest Log: 00:00:00.000167 main     Log opened 2026-02-26T22:07:24.433236000Z
2026-02-26 22:07:26 (27369): Guest Log: 00:00:00.000310 main     OS Product: Linux
2026-02-26 22:07:26 (27369): Guest Log: 00:00:00.000353 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-02-26 22:07:26 (27369): Guest Log: 00:00:00.000383 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-02-26 22:07:26 (27369): Guest Log: 00:00:00.000413 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-02-26 22:07:26 (27369): Guest Log: 00:00:00.000414 main     Process ID: 1253
2026-02-26 22:07:26 (27369): Guest Log: 00:00:00.000415 main     Package type: LINUX_64BITS_GENERIC
2026-02-26 22:07:26 (27369): Guest Log: 00:00:00.005256 main     5.2.32 r132073 started. Verbose level = 0
2026-02-26 22:07:26 (27369): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-02-26 22:07:26 (27369): Guest Log: [INFO] Mounting shared directory
2026-02-26 22:07:26 (27369): Guest Log: [INFO] Checking for init_data.xml
2026-02-26 22:08:17 (27369): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-02-26 22:08:17 (27369): Guest Log: [INFO] Detected branch: prod
2026-02-26 22:08:17 (27369): Guest Log: This is the prod version of the ATLAS job wrapper
2026-02-26 22:08:17 (27369): Guest Log: Copying input files
2026-02-26 22:08:20 (27369): Guest Log: Copied input files into RunAtlas.
2026-02-26 22:08:20 (27369): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-02-26 22:08:20 (27369): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-02-26 22:08:20 (27369): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-02-26 22:08:20 (27369): Guest Log: Further information can be found at the LHC@home message board.
2026-02-26 22:08:29 (27369): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-02-26 22:08:29 (27369): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-02-26 22:08:29 (27369): Guest Log: 2.6.3.0 1544 0 30064 156667 4 1 3117743 4096001 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2026-02-26 22:08:30 (27369): Guest Log: copied the webapp to /var/www
2026-02-26 22:08:30 (27369): Guest Log: core_number=1
2026-02-26 22:08:30 (27369): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-02-26 22:08:30 (27369): Guest Log:  *** Starting ATLAS job. (PandaID=7030882677 taskID=48838416) ***
2026-02-26 23:46:08 (27369): Status Report: Elapsed Time: '6000.000000'
2026-02-26 23:46:08 (27369): Status Report: CPU Time: '5725.120000'
2026-02-27 01:25:10 (27369): Status Report: Elapsed Time: '12000.000000'
2026-02-27 01:25:10 (27369): Status Report: CPU Time: '11667.780000'
2026-02-27 03:04:11 (27369): Status Report: Elapsed Time: '18000.000000'
2026-02-27 03:04:11 (27369): Status Report: CPU Time: '17609.610000'
2026-02-27 04:43:12 (27369): Status Report: Elapsed Time: '24000.000000'
2026-02-27 04:43:12 (27369): Status Report: CPU Time: '23552.030000'
2026-02-27 05:09:53 (27369): Preference change detected
2026-02-27 05:09:53 (27369): Setting CPU throttle for VM. (100%)
2026-02-27 05:09:53 (27369): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-02-27 05:10:27 (27369): Preference change detected
2026-02-27 05:10:27 (27369): Setting CPU throttle for VM. (100%)
2026-02-27 05:10:27 (27369): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-02-27 05:12:43 (27369): Preference change detected
2026-02-27 05:12:43 (27369): Setting CPU throttle for VM. (100%)
2026-02-27 05:12:43 (27369): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-02-27 06:22:13 (27369): Status Report: Elapsed Time: '30000.000000'
2026-02-27 06:22:13 (27369): Status Report: CPU Time: '29494.270000'
2026-02-27 08:01:14 (27369): Status Report: Elapsed Time: '36000.000000'
2026-02-27 08:01:14 (27369): Status Report: CPU Time: '35436.450000'
2026-02-27 09:40:15 (27369): Status Report: Elapsed Time: '42000.000000'
2026-02-27 09:40:15 (27369): Status Report: CPU Time: '41378.430000'
2026-02-27 11:19:16 (27369): Status Report: Elapsed Time: '48000.000000'
2026-02-27 11:19:16 (27369): Status Report: CPU Time: '47320.640000'
2026-02-27 12:58:17 (27369): Status Report: Elapsed Time: '54000.000000'
2026-02-27 12:58:17 (27369): Status Report: CPU Time: '53262.740000'
2026-02-27 14:07:40 (27369): Guest Log:  *** Job finished ***
2026-02-27 14:07:40 (27369): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-02-27 14:07:40 (27369): Guest Log: 2026-02-27 14:06:49,874 | INFO     | job.realtimelogging is not enabled
2026-02-27 14:07:40 (27369): Guest Log: 2026-02-27 14:06:50,876 | INFO     | [payload] run_realtimelog thread has finished
2026-02-27 14:07:40 (27369): Guest Log: 2026-02-27 14:07:34,027 | INFO     | [monitor] cgroup control has ended
2026-02-27 14:07:40 (27369): Guest Log: 2026-02-27 14:07:34,222 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140037838436160)>', '<ExcThread(monitor, started 140037257680640)>']
2026-02-27 14:07:40 (27369): Guest Log: 2026-02-27 14:07:34,409 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-02-27 14:07:40 (27369): Guest Log: 2026-02-27 14:07:34,409 | INFO     | [monitor] control thread has ended
2026-02-27 14:07:40 (27369): Guest Log: 2026-02-27 14:07:39,228 | INFO     | all workflow threads have been joined
2026-02-27 14:07:40 (27369): Guest Log: 2026-02-27 14:07:39,228 | INFO     | end of generic workflow (traces error code: 0)
2026-02-27 14:07:40 (27369): Guest Log: 2026-02-27 14:07:39,228 | INFO     | traces error code: 0
2026-02-27 14:07:40 (27369): Guest Log: 2026-02-27 14:07:39,228 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-02-27 14:07:40 (27369): Guest Log: 2026-02-27 14:07:39,331 [wrapper] ==== pilot stdout END ====
2026-02-27 14:07:40 (27369): Guest Log: 2026-02-27 14:07:39,335 [wrapper] ==== wrapper stdout RESUME ====
2026-02-27 14:07:40 (27369): Guest Log: 2026-02-27 14:07:39,339 [wrapper] pilotpid: 5887
2026-02-27 14:07:40 (27369): Guest Log: 2026-02-27 14:07:39,343 [wrapper] Pilot exit status: 0
2026-02-27 14:07:40 (27369): Guest Log: 2026-02-27 14:07:39,448 [wrapper] pandaids: 7030882677
2026-02-27 14:07:40 (27369): Guest Log: 2026-02-27 14:07:39,475 [wrapper] cleanup supervisor_pilot  8299 5888
2026-02-27 14:07:40 (27369): Guest Log: 2026-02-27 14:07:39,479 [wrapper] Test setup, not cleaning
2026-02-27 14:07:40 (27369): Guest Log: 2026-02-27 14:07:39,484 [wrapper] apfmon messages muted
2026-02-27 14:07:40 (27369): Guest Log: 2026-02-27 14:07:39,488 [wrapper] ==== wrapper stdout END ====
2026-02-27 14:07:40 (27369): Guest Log: 2026-02-27 14:07:39,492 [wrapper] ==== wrapper stderr END ====
2026-02-27 14:07:40 (27369): Guest Log:  *** Error codes and diagnostics ***
2026-02-27 14:07:40 (27369): Guest Log:     "exeErrorCode": 0,
2026-02-27 14:07:40 (27369): Guest Log:     "exeErrorDiag": "",
2026-02-27 14:07:40 (27369): Guest Log:     "pilotErrorCode": 0,
2026-02-27 14:07:40 (27369): Guest Log:     "pilotErrorDiag": "",
2026-02-27 14:07:40 (27369): Guest Log:  *** Listing of results directory ***
2026-02-27 14:07:40 (27369): Guest Log: total 237744
2026-02-27 14:07:40 (27369): Guest Log: -rwx------. 1 atlas atlas     36322 Feb 26 16:50 runpilot2-wrapper.sh
2026-02-27 14:07:40 (27369): Guest Log: -rw-r--r--. 1 atlas atlas    584627 Feb 26 16:50 pilot3.tar.gz
2026-02-27 14:07:40 (27369): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Feb 26 16:50 queuedata.json
2026-02-27 14:07:40 (27369): Guest Log: -rw-r--r--. 1 atlas atlas     15845 Feb 26 22:08 start_atlas.sh
2026-02-27 14:07:40 (27369): Guest Log: -rw-r--r--. 1 atlas atlas      9195 Feb 26 22:08 init_data.xml
2026-02-27 14:07:40 (27369): Guest Log: -rw-r--r--. 1 atlas atlas    597964 Feb 26 22:08 input.tar.gz
2026-02-27 14:07:40 (27369): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Feb 26 22:08 EVNT.48220085._000051.pool.root.1 -> /data/./ATLAS.root_0
2026-02-27 14:07:40 (27369): Guest Log: -rw-r--r--. 1 atlas atlas      2566 Feb 26 22:08 pandaJob.out
2026-02-27 14:07:40 (27369): Guest Log: -rw-------. 1 atlas atlas    998489 Feb 26 22:09 agis_schedconf.cvmfs.json
2026-02-27 14:07:40 (27369): Guest Log: -rw-------. 1 atlas atlas       423 Feb 26 22:09 workernode_map.json
2026-02-27 14:07:40 (27369): Guest Log: drwx------. 5 atlas atlas      4096 Feb 26 22:09 pilot3
2026-02-27 14:07:40 (27369): Guest Log: -rw-------. 1 atlas atlas        95 Feb 27 14:05 pilot_heartbeat.json
2026-02-27 14:07:40 (27369): Guest Log: -rw-------. 1 atlas atlas 222001200 Feb 27 14:05 HITS.48838416._005943.pool.root.1
2026-02-27 14:07:40 (27369): Guest Log: -rw-------. 1 atlas atlas      1031 Feb 27 14:06 memory_monitor_summary.json
2026-02-27 14:07:40 (27369): Guest Log: -rw-------. 1 atlas atlas   1516111 Feb 27 14:06 agis_ddmendpoints.agis.ALL.json
2026-02-27 14:07:40 (27369): Guest Log: -rw-------. 1 atlas atlas    926979 Feb 27 14:06 log.48838416._005943.job.log.tgz.1
2026-02-27 14:07:40 (27369): Guest Log: -rw-------. 1 atlas atlas      6353 Feb 27 14:06 heartbeat.json
2026-02-27 14:07:40 (27369): Guest Log: -rw-------. 1 atlas atlas      4680 Feb 27 14:07 pilotlog.txt
2026-02-27 14:07:40 (27369): Guest Log: -rw-------. 1 atlas atlas   7865445 Feb 27 14:07 log.48838416._005943.job.log.1
2026-02-27 14:07:40 (27369): Guest Log: -rw-------. 1 atlas atlas       357 Feb 27 14:07 output.list
2026-02-27 14:07:40 (27369): Guest Log: -rw-r--r--. 1 atlas atlas       620 Feb 27 14:07 runtime_log
2026-02-27 14:07:40 (27369): Guest Log: -rw-------. 1 atlas atlas   8806400 Feb 27 14:07 result.tar.gz
2026-02-27 14:07:40 (27369): Guest Log: -rw-r--r--. 1 atlas atlas      8637 Feb 27 14:07 runtime_log.err
2026-02-27 14:07:40 (27369): Guest Log: -rw-------. 1 atlas atlas       659 Feb 27 14:07 ihEMDmzjtF9n9Rq4apOajLDm4fhM0noT9bVooX4SDm4R1KDmbR95Qm.diag
2026-02-27 14:07:40 (27369): Guest Log: Looking for outputfile HITS.48838416._005943.pool.root.1
2026-02-27 14:07:40 (27369): Guest Log: HITS file was successfully produced
2026-02-27 14:07:40 (27369): Guest Log: -rw-------. 1 atlas atlas 222001200 Feb 27 14:05 /home/atlas/RunAtlas/HITS.48838416._005943.pool.root.1
2026-02-27 14:07:40 (27369): Guest Log: Successfully finished the ATLAS job!
2026-02-27 14:07:40 (27369): Guest Log: Copying the results back to the shared directory!
2026-02-27 14:07:40 (27369): Guest Log:  *** Contents of shared directory: ***
2026-02-27 14:07:40 (27369): Guest Log: total 293252
2026-02-27 14:07:40 (27369): Guest Log: -rw-r--r--. 1 root root 290852694 Feb 26 22:07 ATLAS.root_0
2026-02-27 14:07:40 (27369): Guest Log: -rw-r--r--. 1 root root      9195 Feb 26 22:07 init_data.xml
2026-02-27 14:07:40 (27369): Guest Log: -rw-r--r--. 1 root root    597964 Feb 26 22:07 input.tar.gz
2026-02-27 14:07:40 (27369): Guest Log: -rw-r--r--. 1 root root   8806400 Feb 27 14:07 result.tar.gz
2026-02-27 14:07:40 (27369): Guest Log: -rw-r--r--. 1 root root     15845 Feb 26 22:07 start_atlas.sh
2026-02-27 14:07:40 (27369): Guest Log:  *** Success! Shutting down the machine. ***
2026-02-27 14:07:40 (27369): VM Completion File Detected.
2026-02-27 14:07:40 (27369): Powering off VM.
2026-02-27 14:07:40 (27369): Successfully stopped VM.
2026-02-27 14:07:40 (27369): Deregistering VM. (boinc_0afba74c497d173b, slot#2)
2026-02-27 14:07:40 (27369): Removing network bandwidth throttle group from VM.
2026-02-27 14:07:41 (27369): Removing VM from VirtualBox.
2026-02-27 14:07:46 (27369): called boinc_finish(0)

</stderr_txt>
]]>

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