Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
16:16:43 (2479968): wrapper (7.7.26015): starting
16:16:43 (2479968): wrapper: running run_atlas (--nthreads 8)
[2026-02-26 16:16:43] Arguments: --nthreads 8
[2026-02-26 16:16:43] Threads: 8
[2026-02-26 16:16:43] Checking for CVMFS
[2026-02-26 16:16:43] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-26 16:16:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-26 16:16:44] Running cvmfs_config stat atlas.cern.ch
[2026-02-26 16:16:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-26 16:16:44] 2.13.3.0 9582 163036 307112 156666 0 528 34425129 40960001 65560 16776704 0 1870660165 99.735 1320981029 47957 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-02-26 16:16:44] CVMFS is ok
[2026-02-26 16:16:44] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-26 16:16:44] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-26 16:16:44] Further information can be found at the LHC@home message board.
[2026-02-26 16:16:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-26 16:16:44] Checking for apptainer binary...
[2026-02-26 16:16:44] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-26 16:16:44] Running /usr/bin/apptainer --version
[2026-02-26 16:16:45] apptainer version 1.4.5-2.el9
[2026-02-26 16:16:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-26 16:16:45] c8-7-4.aglt2.org
[2026-02-26 16:16:45] apptainer works
[2026-02-26 16:16:45] Set ATHENA_PROC_NUMBER=8
[2026-02-26 16:16:45] Set ATHENA_CORE_NUMBER=8
[2026-02-26 16:16:46] Starting ATLAS job with PandaID=7030756784
[2026-02-26 16:16:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
18:40:05 (2479968): BOINC client no longer exists - exiting
18:40:05 (2479968): timer handler: client dead, exiting
18:46:54 (3773595): wrapper (7.7.26015): starting
18:46:54 (3773595): wrapper: running run_atlas (--nthreads 10)
[2026-02-26 18:46:54] Arguments: --nthreads 10
[2026-02-26 18:46:54] Threads: 10
[2026-02-26 18:46:54] This job has been restarted, cleaning up previous attempt
[2026-02-26 18:46:54] Checking for CVMFS
[2026-02-26 18:46:54] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-26 18:46:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-26 18:46:55] Running cvmfs_config stat atlas.cern.ch
[2026-02-26 18:46:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-26 18:46:55] 2.13.3.0 9582 163186 302016 156673 2 547 35219883 40960000 66201 16776704 0 1871889423 99.735 1321058257 47956 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-02-26 18:46:55] CVMFS is ok
[2026-02-26 18:46:55] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-26 18:46:55] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-26 18:46:55] Further information can be found at the LHC@home message board.
[2026-02-26 18:46:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-26 18:46:55] Checking for apptainer binary...
[2026-02-26 18:46:55] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-26 18:46:55] Running /usr/bin/apptainer --version
[2026-02-26 18:46:55] apptainer version 1.4.5-2.el9
[2026-02-26 18:46:55] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-26 18:46:56] c8-7-4.aglt2.org
[2026-02-26 18:46:56] apptainer works
[2026-02-26 18:46:56] Set ATHENA_PROC_NUMBER=10
[2026-02-26 18:46:56] Set ATHENA_CORE_NUMBER=10
[2026-02-26 18:46:56] Starting ATLAS job with PandaID=7030756784
[2026-02-26 18:46:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-26 21:28:49]  *** The last 200 lines of the pilot log: ***
[2026-02-26 21:28:50] 2026-02-27 02:27:54,580 | INFO     | job 7030756784 has state=finished
[2026-02-26 21:28:50] 2026-02-27 02:27:54,581 | INFO     | preparing for final server update for job 7030756784 in state='finished'
[2026-02-26 21:28:50] 2026-02-27 02:27:54,581 | INFO     | reading metadata from: /tmp/boinchome/slots/5/PanDA_Pilot-7030756784/jobReport.json
[2026-02-26 21:28:50] 2026-02-27 02:27:54,582 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/5/workernode_map.json
[2026-02-26 21:28:50] 2026-02-27 02:27:54,582 | INFO     | this job has now completed (state=finished)
[2026-02-26 21:28:50] 2026-02-27 02:27:54,582 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-26 21:28:50] 2026-02-27 02:27:54,582 | INFO     | log transfer has been attempted: DONE
[2026-02-26 21:28:50] 2026-02-27 02:27:54,582 | INFO     | job 7030756784 has finished - writing final server update
[2026-02-26 21:28:50] 2026-02-27 02:27:54,583 | INFO     | total number of processed events: 400 (read)
[2026-02-26 21:28:50] 2026-02-27 02:27:54,612 | INFO     | using path: /tmp/boinchome/slots/5/PanDA_Pilot-7030756784/memory_monitor_summary.json (trf name=prmon)
[2026-02-26 21:28:50] 2026-02-27 02:27:54,612 | INFO     | extracted standard info from prmon json
[2026-02-26 21:28:50] 2026-02-27 02:27:54,613 | INFO     | extracted standard memory fields from prmon json
[2026-02-26 21:28:50] 2026-02-27 02:27:54,613 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-26 21:28:50] 2026-02-27 02:27:54,613 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-26 21:28:50] 2026-02-27 02:27:54,613 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-26 21:28:50] 2026-02-27 02:27:54,614 | INFO     | fitting pss+swap vs Time
[2026-02-26 21:28:50] 2026-02-27 02:27:54,614 | INFO     | sum of square deviations: 1199940638.0
[2026-02-26 21:28:50] 2026-02-27 02:27:54,615 | INFO     | sum of deviations: 23286882796.999996
[2026-02-26 21:28:50] 2026-02-27 02:27:54,615 | INFO     | mean x: 1772154451.0
[2026-02-26 21:28:50] 2026-02-27 02:27:54,615 | INFO     | mean y: 2602439.9108280255
[2026-02-26 21:28:50] 2026-02-27 02:27:54,615 | INFO     | intersect: -34389059690.47772
[2026-02-26 21:28:50] 2026-02-27 02:27:54,615 | INFO     | chi2: 1.2163560092623906
[2026-02-26 21:28:50] 2026-02-27 02:27:54,615 | INFO     | sum of square deviations: 1088905998.0
[2026-02-26 21:28:50] 2026-02-27 02:27:54,616 | INFO     | sum of deviations: 22234142845.0
[2026-02-26 21:28:50] 2026-02-27 02:27:54,616 | INFO     | mean x: 1772154298.5
[2026-02-26 21:28:50] 2026-02-27 02:27:54,616 | INFO     | mean y: 2600993.8815789474
[2026-02-26 21:28:50] 2026-02-27 02:27:54,616 | INFO     | intersect: -36182645380.553185
[2026-02-26 21:28:50] 2026-02-27 02:27:54,616 | INFO     | chi2: 1.2173183834568297
[2026-02-26 21:28:50] 2026-02-27 02:27:54,616 | INFO     | current chi2=1.2173183834568297 (change=-0.0791194508113387 %)
[2026-02-26 21:28:50] 2026-02-27 02:27:54,616 | INFO     | right removable region: 151
[2026-02-26 21:28:50] 2026-02-27 02:27:54,616 | INFO     | sum of square deviations: 1088905998.0
[2026-02-26 21:28:50] 2026-02-27 02:27:54,617 | INFO     | sum of deviations: 1646708694.5
[2026-02-26 21:28:50] 2026-02-27 02:27:54,617 | INFO     | mean x: 1772154603.5
[2026-02-26 21:28:50] 2026-02-27 02:27:54,617 | INFO     | mean y: 2631701.888157895
[2026-02-26 21:28:50] 2026-02-27 02:27:54,617 | INFO     | intersect: -2677326346.778638
[2026-02-26 21:28:50] 2026-02-27 02:27:54,617 | INFO     | chi2: 0.0038533194253003228
[2026-02-26 21:28:50] 2026-02-27 02:27:54,617 | INFO     | current chi2=0.0038533194253003228 (change=99.68320792630136 %)
[2026-02-26 21:28:50] 2026-02-27 02:27:54,617 | INFO     | sum of square deviations: 984941258.0
[2026-02-26 21:28:50] 2026-02-27 02:27:54,617 | INFO     | sum of deviations: 1390766511.0000005
[2026-02-26 21:28:50] 2026-02-27 02:27:54,617 | INFO     | mean x: 1772154756.0
[2026-02-26 21:28:50] 2026-02-27 02:27:54,617 | INFO     | mean y: 2632069.4693877553
[2026-02-26 21:28:50] 2026-02-27 02:27:54,617 | INFO     | intersect: -2499703442.354788
[2026-02-26 21:28:50] 2026-02-27 02:27:54,618 | INFO     | chi2: 0.0037139879941955637
[2026-02-26 21:28:50] 2026-02-27 02:27:54,618 | INFO     | current chi2=0.0037139879941955637 (change=3.6158806402067145 %)
[2026-02-26 21:28:50] 2026-02-27 02:27:54,618 | INFO     | left removable region: 20
[2026-02-26 21:28:50] 2026-02-27 02:27:54,618 | INFO     | sum of square deviations: 697054930.0
[2026-02-26 21:28:50] 2026-02-27 02:27:54,622 | INFO     | sum of deviations: 2286056496.0
[2026-02-26 21:28:50] 2026-02-27 02:27:54,622 | INFO     | mean x: 1772154878.0
[2026-02-26 21:28:50] 2026-02-27 02:27:54,622 | INFO     | mean y: 2629172.6870229007
[2026-02-26 21:28:50] 2026-02-27 02:27:54,622 | INFO     | intersect: -5809317628.650409
[2026-02-26 21:28:50] 2026-02-27 02:27:54,622 | INFO     | chi2: 0.001216579811794776
[2026-02-26 21:28:50] 2026-02-27 02:27:54,623 | INFO     | current memory leak: 3.28 B/s (using 131 data points, chi2=0.00)
[2026-02-26 21:28:50] 2026-02-27 02:27:54,623 | INFO     | could have reported an average CPU frequency of 3799 MHz (9 samples)
[2026-02-26 21:28:50] 2026-02-27 02:27:54,623 | INFO     | ..............................
[2026-02-26 21:28:50] 2026-02-27 02:27:54,623 | INFO     | . Timing measurements:
[2026-02-26 21:28:50] 2026-02-27 02:27:54,623 | INFO     | . get job = 0 s
[2026-02-26 21:28:50] 2026-02-27 02:27:54,623 | INFO     | . initial setup = 1 s
[2026-02-26 21:28:50] 2026-02-27 02:27:54,623 | INFO     | . payload setup = 17 s
[2026-02-26 21:28:50] 2026-02-27 02:27:54,623 | INFO     | . stage-in = 0 s
[2026-02-26 21:28:50] 2026-02-27 02:27:54,623 | INFO     | . payload execution = 9588 s
[2026-02-26 21:28:50] 2026-02-27 02:27:54,623 | INFO     | . stage-out = 7 s
[2026-02-26 21:28:50] 2026-02-27 02:27:54,623 | INFO     | . log creation = 1 s
[2026-02-26 21:28:50] 2026-02-27 02:27:54,623 | INFO     | ..............................
[2026-02-26 21:28:50] 2026-02-27 02:27:54,916 | INFO     | 
[2026-02-26 21:28:50] 2026-02-27 02:27:54,916 | INFO     | job summary report
[2026-02-26 21:28:50] 2026-02-27 02:27:54,916 | INFO     | --------------------------------------------------
[2026-02-26 21:28:50] 2026-02-27 02:27:54,916 | INFO     | PanDA job id: 7030756784
[2026-02-26 21:28:50] 2026-02-27 02:27:54,916 | INFO     | task id: 48838600
[2026-02-26 21:28:50] 2026-02-27 02:27:54,916 | INFO     | errors: (none)
[2026-02-26 21:28:50] 2026-02-27 02:27:54,916 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-26 21:28:50] 2026-02-27 02:27:54,916 | INFO     | pilot state: finished 
[2026-02-26 21:28:50] 2026-02-27 02:27:54,916 | INFO     | transexitcode: 0
[2026-02-26 21:28:50] 2026-02-27 02:27:54,916 | INFO     | exeerrorcode: 0
[2026-02-26 21:28:50] 2026-02-27 02:27:54,916 | INFO     | exeerrordiag: 
[2026-02-26 21:28:50] 2026-02-27 02:27:54,916 | INFO     | exitcode: 0
[2026-02-26 21:28:50] 2026-02-27 02:27:54,916 | INFO     | exitmsg: OK
[2026-02-26 21:28:50] 2026-02-27 02:27:54,916 | INFO     | cpuconsumptiontime: 25813 s
[2026-02-26 21:28:50] 2026-02-27 02:27:54,916 | INFO     | nevents: 400
[2026-02-26 21:28:50] 2026-02-27 02:27:54,916 | INFO     | neventsw: 0
[2026-02-26 21:28:50] 2026-02-27 02:27:54,916 | INFO     | pid: 3830569
[2026-02-26 21:28:50] 2026-02-27 02:27:54,916 | INFO     | pgrp: 3830569
[2026-02-26 21:28:50] 2026-02-27 02:27:54,916 | INFO     | corecount: 10
[2026-02-26 21:28:50] 2026-02-27 02:27:54,916 | INFO     | event service: False
[2026-02-26 21:28:50] 2026-02-27 02:27:54,916 | INFO     | sizes: {0: 2282283, 11: 2282283, 9610: 2310689, 9611: 2310688, 9618: 2319798, 9619: 2320000}
[2026-02-26 21:28:50] 2026-02-27 02:27:55,310 | INFO     | --------------------------------------------------
[2026-02-26 21:28:50] 2026-02-27 02:27:55,310 | INFO     | 
[2026-02-26 21:28:50] 2026-02-27 02:27:55,310 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2026-02-26 21:28:50] 2026-02-27 02:27:55,546 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-26 21:28:50] 2026-02-27 02:27:55,546 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-26 21:28:50] 2026-02-27 02:27:55,546 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-26 21:28:50] 2026-02-27 02:27:55,546 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-26 21:28:50] 2026-02-27 02:27:55,546 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-26 21:28:50] 2026-02-27 02:27:55,546 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-26 21:28:50] 2026-02-27 02:27:55,546 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-26 21:28:50] 2026-02-27 02:27:55,546 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-26 21:28:50] 2026-02-27 02:27:55,546 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-26 21:28:50] 2026-02-27 02:27:55,546 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-26 21:28:50] 2026-02-27 02:27:55,546 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-26 21:28:50] 2026-02-27 02:27:55,546 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-26 21:28:50] 2026-02-27 02:27:55,546 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-26 21:28:50] 2026-02-27 02:27:55,546 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-26 21:28:50] 2026-02-27 02:27:55,546 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-26 21:28:50] 2026-02-27 02:27:55,546 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-26 21:28:50] 2026-02-27 02:27:55,546 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-26 21:28:50] 2026-02-27 02:27:55,546 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-26 21:28:50] 2026-02-27 02:27:55,547 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-26 21:28:50] 2026-02-27 02:27:55,547 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-26 21:28:50] 2026-02-27 02:27:55,547 | INFO     | job 7030756784 has completed (purged errors)
[2026-02-26 21:28:50] 2026-02-27 02:27:55,547 | INFO     | overall cleanup function is called
[2026-02-26 21:28:50] 2026-02-27 02:27:56,572 | INFO     | --- collectZombieJob: --- 10, [3830569]
[2026-02-26 21:28:50] 2026-02-27 02:27:56,573 | INFO     | zombie collector waiting for pid 3830569
[2026-02-26 21:28:50] 2026-02-27 02:27:56,573 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-26 21:28:50] 2026-02-27 02:27:56,573 | INFO     | collected zombie processes
[2026-02-26 21:28:50] 2026-02-27 02:27:56,573 | INFO     | will attempt to kill all subprocesses of pid=3830569
[2026-02-26 21:28:50] 2026-02-27 02:28:04,752 | INFO     | process IDs to be killed: [3830569] (in reverse order)
[2026-02-26 21:28:50] 2026-02-27 02:28:04,838 | INFO     | PID=3806723 has CPU usage=11.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-02-26 21:28:50] 2026-02-27 02:28:04,839 | INFO     | .. there are 104 such processes running
[2026-02-26 21:28:50] 2026-02-27 02:28:05,402 | WARNING  | found no corresponding commands to process id(s)
[2026-02-26 21:28:50] 2026-02-27 02:28:05,402 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-26 21:28:50] 2026-02-27 02:28:05,516 | INFO     | did not find any defunct processes belonging to 3830569
[2026-02-26 21:28:50] 2026-02-27 02:28:06,000 | INFO     | did not find any defunct processes belonging to 3830569
[2026-02-26 21:28:50] 2026-02-27 02:28:06,000 | INFO     | ready for new job
[2026-02-26 21:28:50] 2026-02-27 02:28:06,001 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-26 21:28:50] 2026-02-27 02:28:06,170 | INFO     | **************************************
[2026-02-26 21:28:50] 2026-02-27 02:28:06,171 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-26 21:28:50] 2026-02-27 02:28:06,171 | INFO     | **************************************
[2026-02-26 21:28:50] 2026-02-27 02:28:06,171 | INFO     | 
[2026-02-26 21:28:50] 2026-02-27 02:28:06,187 | INFO     | architecture information:
[2026-02-26 21:28:50] 2026-02-27 02:28:06,191 | INFO     | executing command: cat /etc/os-release
[2026-02-26 21:28:50] 2026-02-27 02:28:06,335 | INFO     | cat /etc/os-release:
[2026-02-26 21:28:50] NAME="CentOS Linux"
[2026-02-26 21:28:50] VERSION="7 (Core)"
[2026-02-26 21:28:50] ID="centos"
[2026-02-26 21:28:50] ID_LIKE="rhel fedora"
[2026-02-26 21:28:50] VERSION_ID="7"
[2026-02-26 21:28:50] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-26 21:28:50] ANSI_COLOR="0;31"
[2026-02-26 21:28:50] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-26 21:28:50] HOME_URL="https://www.centos.org/"
[2026-02-26 21:28:50] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-26 21:28:50] 
[2026-02-26 21:28:50] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-26 21:28:50] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-26 21:28:50] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-26 21:28:50] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-26 21:28:50] 
[2026-02-26 21:28:50] 2026-02-27 02:28:06,335 | INFO     | **************************************
[2026-02-26 21:28:50] 2026-02-27 02:28:06,845 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2026-02-26 21:28:50] 2026-02-27 02:28:07,116 | INFO     | sufficient remaining disk space (168107704320 B)
[2026-02-26 21:28:50] 2026-02-27 02:28:07,116 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-26 21:28:50] 2026-02-27 02:28:07,116 | INFO     | current server update state: UPDATING_FINAL
[2026-02-26 21:28:50] 2026-02-27 02:28:07,116 | INFO     | update_server=False
[2026-02-26 21:28:50] 2026-02-27 02:28:07,116 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-26 21:28:50] 2026-02-27 02:28:07,122 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-26 21:28:50] 2026-02-27 02:28:07,123 | INFO     | aborting loop
[2026-02-26 21:28:50] 2026-02-27 02:28:07,463 | INFO     | all payload control threads have been joined
[2026-02-26 21:28:50] 2026-02-27 02:28:07,683 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-26 21:28:50] 2026-02-27 02:28:07,904 | INFO     | all job control threads have been joined
[2026-02-26 21:28:50] 2026-02-27 02:28:07,944 | INFO     | all data control threads have been joined
[2026-02-26 21:28:50] 2026-02-27 02:28:07,992 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-26 21:28:50] 2026-02-27 02:28:08,125 | INFO     | [job] retrieve thread has finished
[2026-02-26 21:28:50] 2026-02-27 02:28:08,129 | INFO     | [job] job monitor thread has finished
[2026-02-26 21:28:50] 2026-02-27 02:28:08,187 | INFO     | [data] copytool_in thread has finished
[2026-02-26 21:28:50] 2026-02-27 02:28:08,479 | INFO     | [payload] control thread has finished
[2026-02-26 21:28:50] 2026-02-27 02:28:08,680 | INFO     | [payload] validate_pre thread has finished
[2026-02-26 21:28:50] 2026-02-27 02:28:08,953 | INFO     | [data] control thread has finished
[2026-02-26 21:28:50] 2026-02-27 02:28:08,964 | INFO     | [job] control thread has finished
[2026-02-26 21:28:50] 2026-02-27 02:28:08,998 | INFO     | [job] queue monitor thread has finished
[2026-02-26 21:28:50] 2026-02-27 02:28:09,285 | INFO     | [payload] failed_post thread has finished
[2026-02-26 21:28:50] 2026-02-27 02:28:09,436 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-26 21:28:50] 2026-02-27 02:28:09,436 | INFO     | [job] validate thread has finished
[2026-02-26 21:28:50] 2026-02-27 02:28:09,440 | INFO     | [payload] execute_payloads thread has finished
[2026-02-26 21:28:50] 2026-02-27 02:28:09,440 | INFO     | [job] create_data_payload thread has finished
[2026-02-26 21:28:50] 2026-02-27 02:28:09,619 | INFO     | [payload] validate_post thread has finished
[2026-02-26 21:28:50] 2026-02-27 02:28:09,681 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-26 21:28:50] 2026-02-27 02:28:09,693 | INFO     | [data] copytool_out thread has finished
[2026-02-26 21:28:50] 2026-02-27 02:28:13,690 | INFO     | [data] queue_monitor thread has finished
[2026-02-26 21:28:50] 2026-02-27 02:28:39,176 | INFO     | PID=3806723 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-26 21:28:50] 2026-02-27 02:28:39,176 | INFO     | .. there are 104 such processes running
[2026-02-26 21:28:50] 2026-02-27 02:28:39,176 | INFO     | found 0 job(s) in 20 queues
[2026-02-26 21:28:50] 2026-02-27 02:28:39,177 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-26 21:28:50] 2026-02-27 02:28:39,177 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-26 21:28:50] 2026-02-27 02:28:41,741 | INFO     | [monitor] cgroup control has ended
[2026-02-26 21:28:50] 2026-02-27 02:28:43,506 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139791774590784)>', '<ExcThread(monitor, started 139791421126400)>']
[2026-02-26 21:28:50] 2026-02-27 02:28:44,219 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-26 21:28:50] 2026-02-27 02:28:44,220 | INFO     | [monitor] control thread has ended
[2026-02-26 21:28:50] 2026-02-27 02:28:48,532 | INFO     | all workflow threads have been joined
[2026-02-26 21:28:50] 2026-02-27 02:28:48,533 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-26 21:28:50] 2026-02-27 02:28:48,533 | INFO     | traces error code: 0
[2026-02-26 21:28:50] 2026-02-27 02:28:48,533 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-26 21:28:50] 2026-02-27 02:28:48,768 [wrapper] ==== pilot stdout END ====
[2026-02-26 21:28:50] 2026-02-27 02:28:48,785 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-26 21:28:50] 2026-02-27 02:28:48,793 [wrapper] pilotpid: 3806723
[2026-02-26 21:28:50] 2026-02-27 02:28:48,804 [wrapper] Pilot exit status: 0
[2026-02-26 21:28:50] 2026-02-27 02:28:48,893 [wrapper] pandaids: 7030756784 7030756784
[2026-02-26 21:28:50] 2026-02-27 02:28:49,268 [wrapper] cleanup supervisor_pilot  721441 3806724
[2026-02-26 21:28:50] 2026-02-27 02:28:49,302 [wrapper] Test setup, not cleaning
[2026-02-26 21:28:50] 2026-02-27 02:28:49,331 [wrapper] apfmon messages muted
[2026-02-26 21:28:50] 2026-02-27 02:28:49,358 [wrapper] ==== wrapper stdout END ====
[2026-02-26 21:28:50] 2026-02-27 02:28:49,369 [wrapper] ==== wrapper stderr END ====
[2026-02-26 21:28:50]  *** Error codes and diagnostics ***
[2026-02-26 21:28:50]     "exeErrorCode": 0,
[2026-02-26 21:28:50]     "exeErrorDiag": "",
[2026-02-26 21:28:50]     "pilotErrorCode": 0,
[2026-02-26 21:28:50]     "pilotErrorDiag": "",
[2026-02-26 21:28:50]  *** Listing of results directory ***
[2026-02-26 21:28:50] total 721480
[2026-02-26 21:28:50] drwx------. 5 boincer umatlas      4096 Feb  2 10:00 pilot3
[2026-02-26 21:28:50] -rw-r--r--. 1 boincer umatlas    584627 Feb 26 09:24 pilot3.tar.gz
[2026-02-26 21:28:50] -rwx------. 1 boincer umatlas     36322 Feb 26 09:25 runpilot2-wrapper.sh
[2026-02-26 21:28:50] -rw-r--r--. 1 boincer umatlas      5111 Feb 26 09:25 queuedata.json
[2026-02-26 21:28:50] -rw-r--r--. 1 boincer umatlas       100 Feb 26 16:16 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-26 21:28:50] -rwxr-xr-x. 1 boincer umatlas      7986 Feb 26 16:16 run_atlas
[2026-02-26 21:28:50] -rw-r--r--. 1 boincer umatlas       105 Feb 26 16:16 job.xml
[2026-02-26 21:28:50] -rw-r--r--. 3 boincer umatlas 267355921 Feb 26 16:16 EVNT.48220245._000035.pool.root.1
[2026-02-26 21:28:50] -rw-r--r--. 3 boincer umatlas 267355921 Feb 26 16:16 ATLAS.root_0
[2026-02-26 21:28:50] -rw-r--r--. 2 boincer umatlas     15845 Feb 26 16:16 start_atlas.sh
[2026-02-26 21:28:50] drwxrwx--x. 2 boincer umatlas      4096 Feb 26 16:16 shared
[2026-02-26 21:28:50] -rw-r--r--. 2 boincer umatlas    597963 Feb 26 16:16 input.tar.gz
[2026-02-26 21:28:50] -rw-r--r--. 1 boincer umatlas         0 Feb 26 16:16 boinc_lockfile
[2026-02-26 21:28:50] -rw-r--r--. 1 boincer umatlas      2574 Feb 26 18:46 pandaJob.out
[2026-02-26 21:28:50] -rw-------. 1 boincer umatlas        57 Feb 26 18:46 setup.sh.local
[2026-02-26 21:28:50] -rw-------. 1 boincer umatlas    998489 Feb 26 18:47 agis_schedconf.cvmfs.json
[2026-02-26 21:28:50] -rw-------. 1 boincer umatlas       430 Feb 26 18:47 workernode_map.json
[2026-02-26 21:28:50] -rw-r--r--. 1 boincer umatlas      7172 Feb 26 21:22 init_data.xml
[2026-02-26 21:28:50] -rw-------. 1 boincer umatlas 197040212 Feb 26 21:26 HITS.48838600._000777.pool.root.1
[2026-02-26 21:28:50] -rw-r--r--. 1 boincer umatlas       531 Feb 26 21:27 boinc_task_state.xml
[2026-02-26 21:28:50] -rw-------. 1 boincer umatlas      1034 Feb 26 21:27 memory_monitor_summary.json
[2026-02-26 21:28:50] -rw-------. 1 boincer umatlas   1513015 Feb 26 21:27 agis_ddmendpoints.agis.ALL.json
[2026-02-26 21:28:50] -rw-------. 1 boincer umatlas    413774 Feb 26 21:27 log.48838600._000777.job.log.tgz.1
[2026-02-26 21:28:50] -rw-------. 1 boincer umatlas      6321 Feb 26 21:27 heartbeat.json
[2026-02-26 21:28:50] -rw-------. 1 boincer umatlas        96 Feb 26 21:28 pilot_heartbeat.json
[2026-02-26 21:28:50] -rw-------. 1 boincer umatlas      4822 Feb 26 21:28 pilotlog.txt
[2026-02-26 21:28:50] -rw-------. 1 boincer umatlas   1135265 Feb 26 21:28 log.48838600._000777.job.log.1
[2026-02-26 21:28:50] -rw-------. 1 boincer umatlas       357 Feb 26 21:28 output.list
[2026-02-26 21:28:50] -rw-r--r--. 1 boincer umatlas       620 Feb 26 21:28 runtime_log
[2026-02-26 21:28:50] -rw-------. 1 boincer umatlas   1566720 Feb 26 21:28 result.tar.gz
[2026-02-26 21:28:50] -rw-------. 1 boincer umatlas       775 Feb 26 21:28 sK0LDmkTrF9n9Rq4apOajLDm4fhM0noT9bVooX4SDmkF1KDmUmBaSm.diag
[2026-02-26 21:28:50] -rw-r--r--. 1 boincer umatlas      9418 Feb 26 21:28 runtime_log.err
[2026-02-26 21:28:50] -rw-r--r--. 1 boincer umatlas      8192 Feb 26 21:28 boinc_mmap_file
[2026-02-26 21:28:50] -rw-r--r--. 1 boincer umatlas        28 Feb 26 21:28 wrapper_checkpoint.txt
[2026-02-26 21:28:50] -rw-r--r--. 1 boincer umatlas     23633 Feb 26 21:28 stderr.txt
[2026-02-26 21:28:50] HITS file was successfully produced:
[2026-02-26 21:28:50] -rw-------. 1 boincer umatlas 197040212 Feb 26 21:26 shared/HITS.pool.root.1
[2026-02-26 21:28:50]  *** Contents of shared directory: ***
[2026-02-26 21:28:50] total 455656
[2026-02-26 21:28:50] -rw-r--r--. 3 boincer umatlas 267355921 Feb 26 16:16 ATLAS.root_0
[2026-02-26 21:28:50] -rw-r--r--. 2 boincer umatlas     15845 Feb 26 16:16 start_atlas.sh
[2026-02-26 21:28:50] -rw-r--r--. 2 boincer umatlas    597963 Feb 26 16:16 input.tar.gz
[2026-02-26 21:28:50] -rw-------. 1 boincer umatlas 197040212 Feb 26 21:26 HITS.pool.root.1
[2026-02-26 21:28:50] -rw-------. 1 boincer umatlas   1566720 Feb 26 21:28 result.tar.gz
21:28:52 (3773595): run_atlas exited; CPU time 26214.161621
21:28:52 (3773595): called boinc_finish(0)

</stderr_txt>
]]>

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