Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:39:35 (2712930): wrapper (7.7.26015): starting
05:39:35 (2712930): wrapper: running run_atlas (--nthreads 4)
[2026-02-27 05:39:35] Arguments: --nthreads 4
[2026-02-27 05:39:35] Threads: 4
[2026-02-27 05:39:35] Checking for CVMFS
[2026-02-27 05:39:35] No cvmfs_config command found, will try listing directly
[2026-02-27 05:39:35] CVMFS is ok
[2026-02-27 05:39:35] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-27 05:39:35] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-27 05:39:35] Further information can be found at the LHC@home message board.
[2026-02-27 05:39:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-27 05:39:35] Checking for apptainer binary...
[2026-02-27 05:39:35] which: no apptainer in ((null))
[2026-02-27 05:39:35] apptainer is not installed, using version from CVMFS
[2026-02-27 05:39:35] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-27 05:39:35] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot52/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut12.grid.cesnet.cz
[2026-02-27 05:39:35] apptainer works
[2026-02-27 05:39:36] Set ATHENA_PROC_NUMBER=4
[2026-02-27 05:39:36] Set ATHENA_CORE_NUMBER=4
[2026-02-27 05:39:36] Starting ATLAS job with PandaID=7030745866
[2026-02-27 05:39:36] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot52/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-27 08:09:34]  *** The last 200 lines of the pilot log: ***
[2026-02-27 08:09:34] 2026-02-27 06:51:09,444 | INFO     | reading metadata from: /scratch/boinc/var/slot52/slots/0/PanDA_Pilot-7030745866/jobReport.json
[2026-02-27 08:09:34] 2026-02-27 06:51:09,447 | INFO     | added worker_node to metadata from /scratch/boinc/var/slot52/slots/0/workernode_map.json
[2026-02-27 08:09:34] 2026-02-27 06:51:09,447 | INFO     | this job has now completed (state=finished)
[2026-02-27 08:09:34] 2026-02-27 06:51:09,447 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-27 08:09:34] 2026-02-27 06:51:09,447 | INFO     | log transfer has been attempted: DONE
[2026-02-27 08:09:34] 2026-02-27 06:51:09,448 | INFO     | job 7030745866 has finished - writing final server update
[2026-02-27 08:09:34] 2026-02-27 06:51:09,448 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_1329423/.job.ad'
[2026-02-27 08:09:34] 2026-02-27 06:51:09,448 | INFO     | total number of processed events: 400 (read)
[2026-02-27 08:09:34] 2026-02-27 06:51:09,472 | INFO     | using path: /scratch/boinc/var/slot52/slots/0/PanDA_Pilot-7030745866/memory_monitor_summary.json (trf name=prmon)
[2026-02-27 08:09:34] 2026-02-27 06:51:09,473 | INFO     | extracted standard info from prmon json
[2026-02-27 08:09:34] 2026-02-27 06:51:09,473 | INFO     | extracted standard memory fields from prmon json
[2026-02-27 08:09:34] 2026-02-27 06:51:09,473 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-27 08:09:34] 2026-02-27 06:51:09,474 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-27 08:09:34] 2026-02-27 06:51:09,474 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-27 08:09:34] 2026-02-27 06:51:09,476 | INFO     | fitting pss+swap vs Time
[2026-02-27 08:09:34] 2026-02-27 06:51:09,477 | INFO     | sum of square deviations: 665612480.0
[2026-02-27 08:09:34] 2026-02-27 06:51:09,477 | INFO     | sum of deviations: 10966068454.000002
[2026-02-27 08:09:34] 2026-02-27 06:51:09,478 | INFO     | mean x: 1772171133.0
[2026-02-27 08:09:34] 2026-02-27 06:51:09,478 | INFO     | mean y: 2298847.596899225
[2026-02-27 08:09:34] 2026-02-27 06:51:09,478 | INFO     | intersect: -29194494392.63913
[2026-02-27 08:09:34] 2026-02-27 06:51:09,478 | INFO     | chi2: 1.3614752812346573
[2026-02-27 08:09:34] 2026-02-27 06:51:09,478 | INFO     | sum of square deviations: 591173875.0
[2026-02-27 08:09:34] 2026-02-27 06:51:09,479 | INFO     | sum of deviations: 10557932093.999996
[2026-02-27 08:09:34] 2026-02-27 06:51:09,479 | INFO     | mean x: 1772170980.5
[2026-02-27 08:09:34] 2026-02-27 06:51:09,479 | INFO     | mean y: 2298011.0322580645
[2026-02-27 08:09:34] 2026-02-27 06:51:09,479 | INFO     | intersect: -31647376750.181423
[2026-02-27 08:09:34] 2026-02-27 06:51:09,479 | INFO     | chi2: 1.3634797314254834
[2026-02-27 08:09:34] 2026-02-27 06:51:09,480 | INFO     | current chi2=1.3634797314254834 (change=-0.14722633737487523 %)
[2026-02-27 08:09:34] 2026-02-27 06:51:09,480 | INFO     | right removable region: 123
[2026-02-27 08:09:34] 2026-02-27 06:51:09,480 | INFO     | sum of square deviations: 591173875.0
[2026-02-27 08:09:34] 2026-02-27 06:51:09,481 | INFO     | sum of deviations: -5154597539.0
[2026-02-27 08:09:34] 2026-02-27 06:51:09,481 | INFO     | mean x: 1772171285.5
[2026-02-27 08:09:34] 2026-02-27 06:51:09,481 | INFO     | mean y: 2331208.3225806453
[2026-02-27 08:09:34] 2026-02-27 06:51:09,481 | INFO     | intersect: 15454349866.834455
[2026-02-27 08:09:34] 2026-02-27 06:51:09,481 | INFO     | chi2: 0.017230140948398136
[2026-02-27 08:09:34] 2026-02-27 06:51:09,481 | INFO     | current chi2=0.017230140948398136 (change=98.73445069580896 %)
[2026-02-27 08:09:34] 2026-02-27 06:51:09,481 | INFO     | sum of square deviations: 522502820.0
[2026-02-27 08:09:34] 2026-02-27 06:51:09,482 | INFO     | sum of deviations: -4370340607.999999
[2026-02-27 08:09:34] 2026-02-27 06:51:09,482 | INFO     | mean x: 1772171438.0
[2026-02-27 08:09:34] 2026-02-27 06:51:09,482 | INFO     | mean y: 2329459.3949579834
[2026-02-27 08:09:34] 2026-02-27 06:51:09,482 | INFO     | intersect: 14825202185.381687
[2026-02-27 08:09:34] 2026-02-27 06:51:09,483 | INFO     | chi2: 0.017072207079012438
[2026-02-27 08:09:34] 2026-02-27 06:51:09,483 | INFO     | current chi2=0.017072207079012438 (change=0.9166139142952324 %)
[2026-02-27 08:09:34] 2026-02-27 06:51:09,483 | INFO     | left removable region: 20
[2026-02-27 08:09:34] 2026-02-27 06:51:09,483 | INFO     | sum of square deviations: 338804492.0
[2026-02-27 08:09:34] 2026-02-27 06:51:09,483 | INFO     | sum of deviations: -1857307869.9999995
[2026-02-27 08:09:34] 2026-02-27 06:51:09,484 | INFO     | mean x: 1772171560.0
[2026-02-27 08:09:34] 2026-02-27 06:51:09,484 | INFO     | mean y: 2323484.669902913
[2026-02-27 08:09:34] 2026-02-27 06:51:09,484 | INFO     | intersect: 9717271967.047688
[2026-02-27 08:09:34] 2026-02-27 06:51:09,484 | INFO     | chi2: 0.012872114888421559
[2026-02-27 08:09:34] 2026-02-27 06:51:09,484 | INFO     | current memory leak: -5.48 B/s (using 103 data points, chi2=0.01)
[2026-02-27 08:09:34] 2026-02-27 06:51:09,484 | INFO     | could have reported an average CPU frequency of 2708 MHz (8 samples)
[2026-02-27 08:09:34] 2026-02-27 06:51:09,485 | INFO     | ..............................
[2026-02-27 08:09:34] 2026-02-27 06:51:09,485 | INFO     | . Timing measurements:
[2026-02-27 08:09:34] 2026-02-27 06:51:09,485 | INFO     | . get job = 0 s
[2026-02-27 08:09:34] 2026-02-27 06:51:09,485 | INFO     | . initial setup = 8 s
[2026-02-27 08:09:34] 2026-02-27 06:51:09,485 | INFO     | . payload setup = 9 s
[2026-02-27 08:09:34] 2026-02-27 06:51:09,485 | INFO     | . stage-in = 0 s
[2026-02-27 08:09:34] 2026-02-27 06:51:09,485 | INFO     | . payload execution = 7841 s
[2026-02-27 08:09:34] 2026-02-27 06:51:09,485 | INFO     | . stage-out = 0 s
[2026-02-27 08:09:34] 2026-02-27 06:51:09,485 | INFO     | . log creation = 0 s
[2026-02-27 08:09:34] 2026-02-27 06:51:09,485 | INFO     | ..............................
[2026-02-27 08:09:34] 2026-02-27 06:51:09,581 | INFO     | 
[2026-02-27 08:09:34] 2026-02-27 06:51:09,581 | INFO     | job summary report
[2026-02-27 08:09:34] 2026-02-27 06:51:09,581 | INFO     | --------------------------------------------------
[2026-02-27 08:09:34] 2026-02-27 06:51:09,582 | INFO     | PanDA job id: 7030745866
[2026-02-27 08:09:34] 2026-02-27 06:51:09,582 | INFO     | task id: 48700930
[2026-02-27 08:09:34] 2026-02-27 06:51:09,582 | INFO     | errors: (none)
[2026-02-27 08:09:34] 2026-02-27 06:51:09,582 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-27 08:09:34] 2026-02-27 06:51:09,582 | INFO     | pilot state: finished 
[2026-02-27 08:09:34] 2026-02-27 06:51:09,582 | INFO     | transexitcode: 0
[2026-02-27 08:09:34] 2026-02-27 06:51:09,582 | INFO     | exeerrorcode: 0
[2026-02-27 08:09:34] 2026-02-27 06:51:09,582 | INFO     | exeerrordiag: 
[2026-02-27 08:09:34] 2026-02-27 06:51:09,582 | INFO     | exitcode: 0
[2026-02-27 08:09:34] 2026-02-27 06:51:09,582 | INFO     | exitmsg: OK
[2026-02-27 08:09:34] 2026-02-27 06:51:09,582 | INFO     | cpuconsumptiontime: 29798 s
[2026-02-27 08:09:34] 2026-02-27 06:51:09,582 | INFO     | nevents: 400
[2026-02-27 08:09:34] 2026-02-27 06:51:09,582 | INFO     | neventsw: 0
[2026-02-27 08:09:34] 2026-02-27 06:51:09,582 | INFO     | pid: 2748447
[2026-02-27 08:09:34] 2026-02-27 06:51:09,583 | INFO     | pgrp: 2748447
[2026-02-27 08:09:34] 2026-02-27 06:51:09,583 | INFO     | corecount: 4
[2026-02-27 08:09:34] 2026-02-27 06:51:09,583 | INFO     | event service: False
[2026-02-27 08:09:34] 2026-02-27 06:51:09,583 | INFO     | sizes: {0: 2281780, 1: 2282241, 12: 2282241, 7854: 2310150, 7855: 2319170, 7856: 2319226, 7857: 2319548}
[2026-02-27 08:09:34] 2026-02-27 06:51:09,583 | INFO     | --------------------------------------------------
[2026-02-27 08:09:34] 2026-02-27 06:51:09,583 | INFO     | 
[2026-02-27 08:09:34] 2026-02-27 06:51:09,583 | INFO     | executing command: ls -lF /scratch/boinc/var/slot52/slots/0
[2026-02-27 08:09:34] 2026-02-27 06:51:09,620 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-27 08:09:34] 2026-02-27 06:51:09,621 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-27 08:09:34] 2026-02-27 06:51:09,621 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-27 08:09:34] 2026-02-27 06:51:09,621 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-27 08:09:34] 2026-02-27 06:51:09,621 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-27 08:09:34] 2026-02-27 06:51:09,621 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-27 08:09:34] 2026-02-27 06:51:09,621 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-27 08:09:34] 2026-02-27 06:51:09,621 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-27 08:09:34] 2026-02-27 06:51:09,621 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-27 08:09:34] 2026-02-27 06:51:09,621 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-27 08:09:34] 2026-02-27 06:51:09,621 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-27 08:09:34] 2026-02-27 06:51:09,622 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-27 08:09:34] 2026-02-27 06:51:09,622 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-27 08:09:34] 2026-02-27 06:51:09,622 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-27 08:09:34] 2026-02-27 06:51:09,622 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-27 08:09:34] 2026-02-27 06:51:09,622 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-27 08:09:34] 2026-02-27 06:51:09,622 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-27 08:09:34] 2026-02-27 06:51:09,622 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-27 08:09:34] 2026-02-27 06:51:09,622 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-27 08:09:34] 2026-02-27 06:51:09,622 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-27 08:09:34] 2026-02-27 06:51:09,623 | INFO     | job 7030745866 has completed (purged errors)
[2026-02-27 08:09:34] 2026-02-27 06:51:09,623 | INFO     | overall cleanup function is called
[2026-02-27 08:09:34] 2026-02-27 06:51:10,632 | INFO     | --- collectZombieJob: --- 10, [2748447]
[2026-02-27 08:09:34] 2026-02-27 06:51:10,633 | INFO     | zombie collector waiting for pid 2748447
[2026-02-27 08:09:34] 2026-02-27 06:51:10,633 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-27 08:09:34] 2026-02-27 06:51:10,633 | INFO     | collected zombie processes
[2026-02-27 08:09:34] 2026-02-27 06:51:10,633 | INFO     | will attempt to kill all subprocesses of pid=2748447
[2026-02-27 08:09:34] 2026-02-27 06:51:12,552 | INFO     | PID=2726592 has CPU usage=28.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-02-27 08:09:34] 2026-02-27 06:51:12,553 | INFO     | .. there are 19 such processes running
[2026-02-27 08:09:34] 2026-02-27 06:51:12,645 | INFO     | process IDs to be killed: [2748447] (in reverse order)
[2026-02-27 08:09:34] 2026-02-27 06:51:12,954 | WARNING  | found no corresponding commands to process id(s)
[2026-02-27 08:09:34] 2026-02-27 06:51:12,955 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-27 08:09:34] 2026-02-27 06:51:12,987 | INFO     | did not find any defunct processes belonging to 2748447
[2026-02-27 08:09:34] 2026-02-27 06:51:13,016 | INFO     | did not find any defunct processes belonging to 2748447
[2026-02-27 08:09:34] 2026-02-27 06:51:13,016 | INFO     | ready for new job
[2026-02-27 08:09:34] 2026-02-27 06:51:13,016 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-27 08:09:34] 2026-02-27 06:51:13,018 | INFO     | **************************************
[2026-02-27 08:09:34] 2026-02-27 06:51:13,019 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-27 08:09:34] 2026-02-27 06:51:13,019 | INFO     | **************************************
[2026-02-27 08:09:34] 2026-02-27 06:51:13,019 | INFO     | 
[2026-02-27 08:09:34] 2026-02-27 06:51:13,027 | INFO     | architecture information:
[2026-02-27 08:09:34] 2026-02-27 06:51:13,028 | INFO     | executing command: cat /etc/os-release
[2026-02-27 08:09:34] 2026-02-27 06:51:13,052 | INFO     | cat /etc/os-release:
[2026-02-27 08:09:34] NAME="CentOS Linux"
[2026-02-27 08:09:34] VERSION="7 (Core)"
[2026-02-27 08:09:34] ID="centos"
[2026-02-27 08:09:34] ID_LIKE="rhel fedora"
[2026-02-27 08:09:34] VERSION_ID="7"
[2026-02-27 08:09:34] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-27 08:09:34] ANSI_COLOR="0;31"
[2026-02-27 08:09:34] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-27 08:09:34] HOME_URL="https://www.centos.org/"
[2026-02-27 08:09:34] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-27 08:09:34] 
[2026-02-27 08:09:34] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-27 08:09:34] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-27 08:09:34] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-27 08:09:34] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-27 08:09:34] 
[2026-02-27 08:09:34] 2026-02-27 06:51:13,053 | INFO     | **************************************
[2026-02-27 08:09:34] 2026-02-27 06:51:13,556 | INFO     | executing command: df -mP /scratch/boinc/var/slot52/slots/0
[2026-02-27 08:09:34] 2026-02-27 06:51:13,584 | INFO     | sufficient remaining disk space (3316298809344 B)
[2026-02-27 08:09:34] 2026-02-27 06:51:13,585 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-27 08:09:34] 2026-02-27 06:51:13,585 | INFO     | current server update state: UPDATING_FINAL
[2026-02-27 08:09:34] 2026-02-27 06:51:13,585 | INFO     | update_server=False
[2026-02-27 08:09:34] 2026-02-27 06:51:13,585 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-27 08:09:34] 2026-02-27 06:51:13,586 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-27 08:09:34] 2026-02-27 06:51:13,586 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-27 08:09:34] 2026-02-27 06:51:13,587 | INFO     | aborting loop
[2026-02-27 08:09:34] 2026-02-27 06:51:13,776 | INFO     | all data control threads have been joined
[2026-02-27 08:09:34] 2026-02-27 06:51:14,116 | INFO     | all job control threads have been joined
[2026-02-27 08:09:34] 2026-02-27 06:51:14,217 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-27 08:09:34] 2026-02-27 06:51:14,590 | INFO     | [job] retrieve thread has finished
[2026-02-27 08:09:34] 2026-02-27 06:51:14,592 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-27 08:09:34] 2026-02-27 06:51:14,593 | INFO     | [job] job monitor thread has finished
[2026-02-27 08:09:34] 2026-02-27 06:51:14,737 | INFO     | [payload] failed_post thread has finished
[2026-02-27 08:09:34] 2026-02-27 06:51:14,781 | INFO     | [data] control thread has finished
[2026-02-27 08:09:34] 2026-02-27 06:51:14,820 | INFO     | all payload control threads have been joined
[2026-02-27 08:09:34] 2026-02-27 06:51:14,867 | INFO     | [job] create_data_payload thread has finished
[2026-02-27 08:09:34] 2026-02-27 06:51:14,930 | INFO     | [payload] execute_payloads thread has finished
[2026-02-27 08:09:34] 2026-02-27 06:51:15,070 | INFO     | [data] copytool_in thread has finished
[2026-02-27 08:09:34] 2026-02-27 06:51:15,121 | INFO     | [job] control thread has finished
[2026-02-27 08:09:34] 2026-02-27 06:51:15,179 | INFO     | [payload] validate_pre thread has finished
[2026-02-27 08:09:34] 2026-02-27 06:51:15,538 | INFO     | [payload] validate_post thread has finished
[2026-02-27 08:09:34] 2026-02-27 06:51:15,592 | INFO     | [data] copytool_out thread has finished
[2026-02-27 08:09:34] 2026-02-27 06:51:15,598 | INFO     | [job] queue monitor thread has finished
[2026-02-27 08:09:34] 2026-02-27 06:51:15,761 | INFO     | [job] validate thread has finished
[2026-02-27 08:09:34] 2026-02-27 06:51:15,825 | INFO     | [payload] control thread has finished
[2026-02-27 08:09:34] 2026-02-27 06:51:18,227 | INFO     | [data] queue_monitor thread has finished
[2026-02-27 08:09:34] 2026-02-27 06:51:24,362 | INFO     | job.realtimelogging is not enabled
[2026-02-27 08:09:34] 2026-02-27 06:51:25,367 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-27 08:09:34] 2026-02-27 06:51:45,549 | INFO     | PID=2726592 has CPU usage=5.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-27 08:09:34] 2026-02-27 06:51:45,549 | INFO     | .. there are 19 such processes running
[2026-02-27 08:09:34] 2026-02-27 06:51:45,550 | INFO     | found 0 job(s) in 20 queues
[2026-02-27 08:09:34] 2026-02-27 06:51:45,550 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-27 08:09:34] 2026-02-27 06:51:45,550 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-27 08:09:34] 2026-02-27 06:52:12,914 | INFO     | [monitor] cgroup control has ended
[2026-02-27 08:09:34] 2026-02-27 06:52:13,478 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22723745081152)>', '<ExcThread(monitor, started 22723503068928)>']
[2026-02-27 08:09:34] 2026-02-27 06:52:13,694 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-27 08:09:34] 2026-02-27 06:52:13,694 | INFO     | [monitor] control thread has ended
[2026-02-27 08:09:34] 2026-02-27 06:52:18,503 | INFO     | all workflow threads have been joined
[2026-02-27 08:09:34] 2026-02-27 06:52:18,503 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-27 08:09:34] 2026-02-27 06:52:18,503 | INFO     | traces error code: 0
[2026-02-27 08:09:34] 2026-02-27 06:52:18,504 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-27 08:09:34] 2026-02-27 06:52:18,669 [wrapper] ==== pilot stdout END ====
[2026-02-27 08:09:34] 2026-02-27 06:52:18,673 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-27 08:09:34] 2026-02-27 06:52:18,680 [wrapper] pilotpid: 2726592
[2026-02-27 08:09:34] 2026-02-27 06:52:18,684 [wrapper] Pilot exit status: 0
[2026-02-27 08:09:34] 2026-02-27 06:52:18,698 [wrapper] pandaids: 7030745866
[2026-02-27 08:09:34] 2026-02-27 06:52:18,911 [wrapper] cleanup supervisor_pilot 2992950 2726593
[2026-02-27 08:09:34] 2026-02-27 06:52:18,915 [wrapper] Test setup, not cleaning
[2026-02-27 08:09:34] 2026-02-27 06:52:18,920 [wrapper] apfmon messages muted
[2026-02-27 08:09:34] 2026-02-27 06:52:18,924 [wrapper] ==== wrapper stdout END ====
[2026-02-27 08:09:34] 2026-02-27 06:52:18,928 [wrapper] ==== wrapper stderr END ====
[2026-02-27 08:09:34]  *** Error codes and diagnostics ***
[2026-02-27 08:09:34]     "exeErrorCode": 0,
[2026-02-27 08:09:34]     "exeErrorDiag": "",
[2026-02-27 08:09:34]     "pilotErrorCode": 0,
[2026-02-27 08:09:34]     "pilotErrorDiag": "",
[2026-02-27 08:09:34]  *** Listing of results directory ***
[2026-02-27 08:09:34] total 333424
[2026-02-27 08:09:34] -rw-r--r-- 1 boinc boinc    584627 Feb 26 15:24 pilot3.tar.gz
[2026-02-27 08:09:34] -rwx------ 1 boinc boinc     36322 Feb 26 15:24 runpilot2-wrapper.sh
[2026-02-27 08:09:34] -rw-r--r-- 1 boinc boinc      5111 Feb 26 15:24 queuedata.json
[2026-02-27 08:09:34] -rw-r--r-- 1 boinc boinc       100 Feb 27 05:39 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-27 08:09:34] -rwxr-xr-x 1 boinc boinc      7986 Feb 27 05:39 run_atlas
[2026-02-27 08:09:34] -rw-r--r-- 1 boinc boinc       105 Feb 27 05:39 job.xml
[2026-02-27 08:09:34] -rw-r--r-- 2 boinc boinc 187353252 Feb 27 05:39 EVNT.48700928._000001.pool.root.1
[2026-02-27 08:09:34] -rw-r--r-- 1 boinc boinc      6695 Feb 27 05:39 init_data.xml
[2026-02-27 08:09:34] -rw-r--r-- 2 boinc boinc     15845 Feb 27 05:39 start_atlas.sh
[2026-02-27 08:09:34] drwxrwx--x 2 boinc boinc      4096 Feb 27 05:39 shared
[2026-02-27 08:09:34] -rw-r--r-- 2 boinc boinc    597929 Feb 27 05:39 input.tar.gz
[2026-02-27 08:09:34] -rw-r--r-- 1 boinc boinc         0 Feb 27 05:39 boinc_lockfile
[2026-02-27 08:09:34] -rw-r--r-- 1 boinc boinc      2513 Feb 27 05:39 pandaJob.out
[2026-02-27 08:09:34] -rw------- 1 boinc boinc    998489 Feb 27 05:39 agis_schedconf.cvmfs.json
[2026-02-27 08:09:34] -rw------- 1 boinc boinc   1513015 Feb 27 05:39 agis_ddmendpoints.agis.ALL.json
[2026-02-27 08:09:34] -rw------- 1 boinc boinc       439 Feb 27 05:39 workernode_map.json
[2026-02-27 08:09:34] drwx------ 5 boinc boinc      4096 Feb 27 05:40 pilot3
[2026-02-27 08:09:34] -rw------- 1 boinc boinc 147327838 Feb 27 07:50 HITS.48700930._000079.pool.root.1
[2026-02-27 08:09:34] -rw-r--r-- 1 boinc boinc       528 Feb 27 07:50 boinc_task_state.xml
[2026-02-27 08:09:34] -rw------- 1 boinc boinc      1024 Feb 27 07:51 memory_monitor_summary.json
[2026-02-27 08:09:34] -rw------- 1 boinc boinc    299059 Feb 27 07:51 log.48700930._000079.job.log.tgz.1
[2026-02-27 08:09:34] -rw------- 1 boinc boinc      6337 Feb 27 07:51 heartbeat.json
[2026-02-27 08:09:34] -rw------- 1 boinc boinc        95 Feb 27 07:51 pilot_heartbeat.json
[2026-02-27 08:09:34] -rw------- 1 boinc boinc      4903 Feb 27 07:52 pilotlog.txt
[2026-02-27 08:09:34] -rw------- 1 boinc boinc   1106647 Feb 27 07:52 log.48700930._000079.job.log.1
[2026-02-27 08:09:34] -rw------- 1 boinc boinc       357 Feb 27 07:52 output.list
[2026-02-27 08:09:34] -rw-r--r-- 1 boinc boinc       620 Feb 27 07:52 runtime_log
[2026-02-27 08:09:34] -rw------- 1 boinc boinc   1423360 Feb 27 07:52 result.tar.gz
[2026-02-27 08:09:34] -rw-r--r-- 1 boinc boinc      9204 Feb 27 07:52 runtime_log.err
[2026-02-27 08:09:34] -rw------- 1 boinc boinc       662 Feb 27 07:52 PAzLDm8SrF9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDm512KDm7tPLdm.diag
[2026-02-27 08:09:34] -rw-r--r-- 1 boinc boinc        26 Feb 27 08:09 wrapper_checkpoint.txt
[2026-02-27 08:09:34] -rw-r--r-- 1 boinc boinc      8192 Feb 27 08:09 boinc_mmap_file
[2026-02-27 08:09:34] -rw-r--r-- 1 boinc boinc     21210 Feb 27 08:09 stderr.txt
[2026-02-27 08:09:34] HITS file was successfully produced:
[2026-02-27 08:09:34] -rw------- 1 boinc boinc 147327838 Feb 27 07:50 shared/HITS.pool.root.1
[2026-02-27 08:09:34]  *** Contents of shared directory: ***
[2026-02-27 08:09:34] total 328840
[2026-02-27 08:09:34] -rw-r--r-- 2 boinc boinc 187353252 Feb 27 05:39 ATLAS.root_0
[2026-02-27 08:09:34] -rw-r--r-- 2 boinc boinc     15845 Feb 27 05:39 start_atlas.sh
[2026-02-27 08:09:34] -rw-r--r-- 2 boinc boinc    597929 Feb 27 05:39 input.tar.gz
[2026-02-27 08:09:34] -rw------- 1 boinc boinc 147327838 Feb 27 07:50 HITS.pool.root.1
[2026-02-27 08:09:34] -rw------- 1 boinc boinc   1423360 Feb 27 07:52 result.tar.gz
08:09:35 (2712930): run_atlas exited; CPU time 30319.413099
08:09:35 (2712930): called boinc_finish(0)

</stderr_txt>
]]>

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