Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
06:42:30 (226736): wrapper (7.7.26015): starting
06:42:30 (226736): wrapper: running run_atlas (--nthreads 2)
[2026-02-27 06:42:30] Arguments: --nthreads 2
[2026-02-27 06:42:30] Threads: 2
[2026-02-27 06:42:30] Checking for CVMFS
[2026-02-27 06:42:30] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-27 06:42:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-27 06:42:30] Running cvmfs_config stat atlas.cern.ch
[2026-02-27 06:42:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-27 06:42:30] 2.9.2.0 6350 2371 57380 156684 1 50 24690250 36864001 0 130560 0 655587 99.968 104698 680 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-02-27 06:42:30] CVMFS is ok
[2026-02-27 06:42:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-27 06:42:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-27 06:42:30] Further information can be found at the LHC@home message board.
[2026-02-27 06:42:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-27 06:42:30] Checking for apptainer binary...
[2026-02-27 06:42:30] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-27 06:42:30] Running /usr/bin/apptainer --version
[2026-02-27 06:42:30] apptainer version 1.4.1-1.1
[2026-02-27 06:42:30] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-27 06:42:30] legendA165
[2026-02-27 06:42:30] apptainer works
[2026-02-27 06:42:30] Set ATHENA_PROC_NUMBER=2
[2026-02-27 06:42:30] Set ATHENA_CORE_NUMBER=2
[2026-02-27 06:42:30] Starting ATLAS job with PandaID=7030731377
[2026-02-27 06:42:30] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-27 09:39:14]  *** The last 200 lines of the pilot log: ***
[2026-02-27 09:39:14] 2026-02-27 08:38:44,487 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-27 09:39:14] 2026-02-27 08:38:44,487 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-27 09:39:14] 2026-02-27 08:38:44,487 | INFO     | aborting loop
[2026-02-27 09:39:14] 2026-02-27 08:38:44,487 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-27 09:39:14] 2026-02-27 08:38:44,487 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-27 09:39:14] 2026-02-27 08:38:44,983 | INFO     | all data control threads have been joined
[2026-02-27 09:39:14] 2026-02-27 08:38:45,437 | INFO     | all payload control threads have been joined
[2026-02-27 09:39:14] 2026-02-27 08:38:45,492 | INFO     | [job] job monitor thread has finished
[2026-02-27 09:39:14] 2026-02-27 08:38:45,493 | INFO     | [job] queue monitor thread has finished
[2026-02-27 09:39:14] 2026-02-27 08:38:45,493 | INFO     | [job] retrieve thread has finished
[2026-02-27 09:39:14] 2026-02-27 08:38:45,494 | INFO     | [data] copytool_in thread has finished
[2026-02-27 09:39:14] 2026-02-27 08:38:45,806 | INFO     | all job control threads have been joined
[2026-02-27 09:39:14] 2026-02-27 08:38:45,937 | INFO     | [payload] failed_post thread has finished
[2026-02-27 09:39:14] 2026-02-27 08:38:45,988 | INFO     | [data] control thread has finished
[2026-02-27 09:39:14] 2026-02-27 08:38:46,348 | INFO     | [payload] execute_payloads thread has finished
[2026-02-27 09:39:14] 2026-02-27 08:38:46,443 | INFO     | [payload] control thread has finished
[2026-02-27 09:39:14] 2026-02-27 08:38:46,493 | INFO     | [data] copytool_out thread has finished
[2026-02-27 09:39:14] 2026-02-27 08:38:46,647 | INFO     | [job] validate thread has finished
[2026-02-27 09:39:14] 2026-02-27 08:38:46,671 | INFO     | [payload] validate_post thread has finished
[2026-02-27 09:39:14] 2026-02-27 08:38:46,715 | INFO     | [job] create_data_payload thread has finished
[2026-02-27 09:39:14] 2026-02-27 08:38:46,812 | INFO     | [job] control thread has finished
[2026-02-27 09:39:14] 2026-02-27 08:38:46,901 | INFO     | [payload] validate_pre thread has finished
[2026-02-27 09:39:14] 2026-02-27 08:38:48,494 | INFO     | [data] queue_monitor thread has finished
[2026-02-27 09:39:14] 2026-02-27 08:38:55,339 | INFO     | job.realtimelogging is not enabled
[2026-02-27 09:39:14] 2026-02-27 08:38:56,345 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-27 09:39:14] 2026-02-27 08:39:05,055 | INFO     | [monitor] cgroup control has ended
[2026-02-27 09:39:14] 2026-02-27 08:39:07,000 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140345869772608)>', '<ExcThread(monitor, started 140345211864832)>']
[2026-02-27 09:39:14] 2026-02-27 08:39:12,026 | INFO     | all workflow threads have been joined
[2026-02-27 09:39:14] 2026-02-27 08:39:12,027 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-27 09:39:14] 2026-02-27 08:39:12,027 | INFO     | traces error code: 0
[2026-02-27 09:39:14] 2026-02-27 08:39:12,027 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-27 09:39:14] 2026-02-27 08:39:14,872 | INFO     | PID=230763 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-02-27 09:39:14] 2026-02-27 08:39:14,872 | INFO     | found 0 job(s) in 20 queues
[2026-02-27 09:39:14] 2026-02-27 08:39:14,872 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-27 09:39:14] 2026-02-27 08:39:14,872 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-27 09:39:14] 2026-02-27 08:39:14,872 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-27 09:39:14] 2026-02-27 08:39:14,872 | INFO     | [monitor] control thread has ended
[2026-02-27 09:39:14] 2026-02-27 08:39:14,910 [wrapper] ==== pilot stdout END ====
[2026-02-27 09:39:14] 2026-02-27 08:39:14,913 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-27 09:39:14] 2026-02-27 08:39:14,915 [wrapper] pilotpid: 230763
[2026-02-27 09:39:14] 2026-02-27 08:39:14,917 [wrapper] Pilot exit status: 0
[2026-02-27 09:39:14] 2026-02-27 08:39:14,923 [wrapper] pandaids: 7030731377
[2026-02-27 09:39:14] 2026-02-27 08:39:14,935 [wrapper] cleanup supervisor_pilot  240583 230764
[2026-02-27 09:39:14] 2026-02-27 08:39:14,937 [wrapper] Test setup, not cleaning
[2026-02-27 09:39:14] 2026-02-27 08:39:14,940 [wrapper] apfmon messages muted
[2026-02-27 09:39:14] 2026-02-27 08:39:14,942 [wrapper] ==== wrapper stdout END ====
[2026-02-27 09:39:14] 2026-02-27 08:39:14,944 [wrapper] ==== wrapper stderr END ====
[2026-02-27 09:39:14]  *** Error codes and diagnostics ***
[2026-02-27 09:39:14]     "exeErrorCode": 0,
[2026-02-27 09:39:14]     "exeErrorDiag": "",
[2026-02-27 09:39:14]     "pilotErrorCode": 0,
[2026-02-27 09:39:14]     "pilotErrorDiag": "",
[2026-02-27 09:39:14]  *** Listing of results directory ***
[2026-02-27 09:39:14] total 541328
[2026-02-27 09:39:14] -rw-r--r-- 1 boinc boinc    584627 Feb 26 13:16 pilot3.tar.gz
[2026-02-27 09:39:14] -rwx------ 1 boinc boinc     36322 Feb 26 13:18 runpilot2-wrapper.sh
[2026-02-27 09:39:14] -rw-r--r-- 1 boinc boinc      5111 Feb 26 13:19 queuedata.json
[2026-02-27 09:39:14] -rw-r--r-- 1 boinc boinc       100 Feb 27 06:42 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-27 09:39:14] -rwxr-xr-x 1 boinc boinc      7986 Feb 27 06:42 run_atlas
[2026-02-27 09:39:14] -rw-r--r-- 1 boinc boinc       105 Feb 27 06:42 job.xml
[2026-02-27 09:39:14] -rw-r--r-- 2 boinc boinc 300422116 Feb 27 06:42 EVNT.48448630._000002.pool.root.1
[2026-02-27 09:39:14] -rw-r--r-- 2 boinc boinc    597963 Feb 27 06:42 input.tar.gz
[2026-02-27 09:39:14] -rw-r--r-- 2 boinc boinc     15845 Feb 27 06:42 start_atlas.sh
[2026-02-27 09:39:14] drwxrwx--x 2 boinc boinc      4096 Feb 27 06:42 shared
[2026-02-27 09:39:14] -rw-r--r-- 1 boinc boinc         0 Feb 27 06:42 boinc_setup_complete
[2026-02-27 09:39:14] -rw-r--r-- 1 boinc boinc      6209 Feb 27 06:42 init_data.xml
[2026-02-27 09:39:14] -rw-r--r-- 1 boinc boinc         0 Feb 27 06:42 boinc_lockfile
[2026-02-27 09:39:14] -rw-r--r-- 1 boinc boinc      2597 Feb 27 06:42 pandaJob.out
[2026-02-27 09:39:14] -rw------- 1 boinc boinc    998489 Feb 27 06:42 agis_schedconf.cvmfs.json
[2026-02-27 09:39:14] -rw------- 1 boinc boinc   1513015 Feb 27 06:42 agis_ddmendpoints.agis.ALL.json
[2026-02-27 09:39:14] -rw------- 1 boinc boinc       421 Feb 27 06:42 workernode_map.json
[2026-02-27 09:39:14] drwx------ 5 boinc boinc      4096 Feb 27 06:42 pilot3
[2026-02-27 09:39:14] -rw------- 1 boinc boinc 246341157 Feb 27 09:38 HITS.48842565._000046.pool.root.1
[2026-02-27 09:39:14] -rw-r--r-- 1 boinc boinc       531 Feb 27 09:38 boinc_task_state.xml
[2026-02-27 09:39:14] -rw------- 1 boinc boinc        95 Feb 27 09:38 pilot_heartbeat.json
[2026-02-27 09:39:14] -rw------- 1 boinc boinc      1018 Feb 27 09:38 memory_monitor_summary.json
[2026-02-27 09:39:14] -rw------- 1 boinc boinc    329994 Feb 27 09:38 log.48842565._000046.job.log.tgz.1
[2026-02-27 09:39:14] -rw------- 1 boinc boinc      6305 Feb 27 09:38 heartbeat.json
[2026-02-27 09:39:14] -rw-r--r-- 1 boinc boinc      8192 Feb 27 09:39 boinc_mmap_file
[2026-02-27 09:39:14] -rw-r--r-- 1 boinc boinc        28 Feb 27 09:39 wrapper_checkpoint.txt
[2026-02-27 09:39:14] -rw------- 1 boinc boinc       746 Feb 27 09:39 pilotlog.txt
[2026-02-27 09:39:14] -rw------- 1 boinc boinc   1494524 Feb 27 09:39 log.48842565._000046.job.log.1
[2026-02-27 09:39:14] -rw------- 1 boinc boinc       357 Feb 27 09:39 output.list
[2026-02-27 09:39:14] -rw-r--r-- 1 boinc boinc       620 Feb 27 09:39 runtime_log
[2026-02-27 09:39:14] -rw------- 1 boinc boinc   1843200 Feb 27 09:39 result.tar.gz
[2026-02-27 09:39:14] -rw-r--r-- 1 boinc boinc      8917 Feb 27 09:39 runtime_log.err
[2026-02-27 09:39:14] -rw------- 1 boinc boinc       664 Feb 27 09:39 bEkMDm1UpF9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmvu2KDmRrJvPm.diag
[2026-02-27 09:39:14] -rw-r--r-- 1 boinc boinc      7279 Feb 27 09:39 stderr.txt
[2026-02-27 09:39:14] HITS file was successfully produced:
[2026-02-27 09:39:14] -rw------- 1 boinc boinc 246341157 Feb 27 09:38 shared/HITS.pool.root.1
[2026-02-27 09:39:14]  *** Contents of shared directory: ***
[2026-02-27 09:39:14] total 536360
[2026-02-27 09:39:14] -rw-r--r-- 2 boinc boinc 300422116 Feb 27 06:42 ATLAS.root_0
[2026-02-27 09:39:14] -rw-r--r-- 2 boinc boinc    597963 Feb 27 06:42 input.tar.gz
[2026-02-27 09:39:14] -rw-r--r-- 2 boinc boinc     15845 Feb 27 06:42 start_atlas.sh
[2026-02-27 09:39:14] -rw------- 1 boinc boinc 246341157 Feb 27 09:38 HITS.pool.root.1
[2026-02-27 09:39:14] -rw------- 1 boinc boinc   1843200 Feb 27 09:39 result.tar.gz
09:39:16 (226736): run_atlas exited; CPU time 20637.073435
09:39:16 (226736): called boinc_finish(0)

</stderr_txt>
]]>

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