Stderr output

<core_client_version>8.2.6</core_client_version>
<![CDATA[
<stderr_txt>
06:10:44 (2304049): wrapper (7.7.26015): starting
06:10:44 (2304049): wrapper: running run_atlas (--nthreads 4)
[2026-02-28 06:10:44] Arguments: --nthreads 4
[2026-02-28 06:10:44] Threads: 4
[2026-02-28 06:10:44] Checking for CVMFS
[2026-02-28 06:10:44] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-28 06:10:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-28 06:10:44] Running cvmfs_config stat atlas.cern.ch
[2026-02-28 06:10:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-28 06:10:44] 2.13.3.0 11582 17606 45612 156719 2 49 30617245 33554433 0 130560 0 7181888 99.985 619367 288 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://127.0.0.1:25468 1
[2026-02-28 06:10:44] CVMFS is ok
[2026-02-28 06:10:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-28 06:10:44] Checking for apptainer binary...
[2026-02-28 06:10:44] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-28 06:10:44] Running /usr/bin/apptainer --version
[2026-02-28 06:10:44] apptainer version 1.4.5
[2026-02-28 06:10:44] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-28 06:10:44] INFO: /etc/singularity/ exists; cleanup by system administrator is not complete (see https://apptainer.org/docs/admin/latest/singularity_migration.html) Evangelos-Katikos
[2026-02-28 06:10:44] apptainer works
[2026-02-28 06:10:44] Set ATHENA_PROC_NUMBER=4
[2026-02-28 06:10:44] Set ATHENA_CORE_NUMBER=4
[2026-02-28 06:10:44] Starting ATLAS job with PandaID=7030658916
[2026-02-28 06:10:44] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/ek/BOINC/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-28 07:18:16]  *** The last 200 lines of the pilot log: ***
[2026-02-28 07:18:16]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-02-28 07:18:16]  is_altstaged=None
[2026-02-28 07:18:16]  is_tar=False
[2026-02-28 07:18:16]  lfn=log.48838416._005234.job.log.tgz.1
[2026-02-28 07:18:16]  mtime=0
[2026-02-28 07:18:16]  protocol_id=None
[2026-02-28 07:18:16]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-02-28 07:18:16]  replicas=None
[2026-02-28 07:18:16]  scope=mc23_13p6TeV
[2026-02-28 07:18:16]  status=None
[2026-02-28 07:18:16]  status_code=0
[2026-02-28 07:18:16]  storage_token=
[2026-02-28 07:18:16]  surl=/home/ek/BOINC/slots/0/PanDA_Pilot-7030658916/log.48838416._005234.job.log.tgz.1
[2026-02-28 07:18:16]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/6d/6a/log.48838416._005234.job.log.tgz.1
[2026-02-28 07:18:16]  workdir=None
[2026-02-28 07:18:16] ]
[2026-02-28 07:18:16] 2026-02-28 05:17:41,591 | INFO     | transferring file log.48838416._005234.job.log.tgz.1 from /home/ek/BOINC/slots/0/PanDA_Pilot-7030658916/log.48838416._005234.job.log.tgz.1 to /home/ek/BOINC/slots/
[2026-02-28 07:18:16] 2026-02-28 05:17:41,591 | INFO     | executing command: /usr/bin/env mv /home/ek/BOINC/slots/0/PanDA_Pilot-7030658916/log.48838416._005234.job.log.tgz.1 /home/ek/BOINC/slots/0/log.48838416._005234.job
[2026-02-28 07:18:16] 2026-02-28 05:17:41,599 | INFO     | adding to output.list: log.48838416._005234.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/6d/6a/log.48838416._005234.job.log.tg
[2026-02-28 07:18:16] 2026-02-28 05:17:41,599 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-02-28 07:18:16] 2026-02-28 05:17:41,600 | INFO     | summary of transferred files:
[2026-02-28 07:18:16] 2026-02-28 05:17:41,600 | INFO     |  -- lfn=log.48838416._005234.job.log.tgz.1, status_code=0, status=transferred
[2026-02-28 07:18:16] 2026-02-28 05:17:41,600 | INFO     | stage-out finished correctly
[2026-02-28 07:18:16] 2026-02-28 05:17:43,371 | INFO     | time since job start (4009s) is within the limit (349056.0s)
[2026-02-28 07:18:16] 2026-02-28 05:17:43,456 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-02-28 07:18:16] 2026-02-28 05:17:44,474 | INFO     | PID=2308206 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-28 07:18:16] 2026-02-28 05:17:44,860 | INFO     | job 7030658916 has state=finished
[2026-02-28 07:18:16] 2026-02-28 05:17:44,860 | INFO     | preparing for final server update for job 7030658916 in state='finished'
[2026-02-28 07:18:16] 2026-02-28 05:17:44,860 | INFO     | reading metadata from: /home/ek/BOINC/slots/0/PanDA_Pilot-7030658916/jobReport.json
[2026-02-28 07:18:16] 2026-02-28 05:17:44,861 | INFO     | added worker_node to metadata from /home/ek/BOINC/slots/0/workernode_map.json
[2026-02-28 07:18:16] 2026-02-28 05:17:44,861 | INFO     | this job has now completed (state=finished)
[2026-02-28 07:18:16] 2026-02-28 05:17:44,861 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-28 07:18:16] 2026-02-28 05:17:44,861 | INFO     | log transfer has been attempted: DONE
[2026-02-28 07:18:16] 2026-02-28 05:17:44,861 | INFO     | job 7030658916 has finished - writing final server update
[2026-02-28 07:18:16] 2026-02-28 05:17:44,861 | INFO     | total number of processed events: 400 (read)
[2026-02-28 07:18:16] 2026-02-28 05:17:44,863 | INFO     | using path: /home/ek/BOINC/slots/0/PanDA_Pilot-7030658916/memory_monitor_summary.json (trf name=prmon)
[2026-02-28 07:18:16] 2026-02-28 05:17:44,863 | INFO     | extracted standard info from prmon json
[2026-02-28 07:18:16] 2026-02-28 05:17:44,863 | INFO     | extracted standard memory fields from prmon json
[2026-02-28 07:18:16] 2026-02-28 05:17:44,863 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-28 07:18:16] 2026-02-28 05:17:44,863 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-28 07:18:16] 2026-02-28 05:17:44,863 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-28 07:18:16] 2026-02-28 05:17:44,864 | INFO     | fitting pss+swap vs Time
[2026-02-28 07:18:16] 2026-02-28 05:17:44,864 | INFO     | sum of square deviations: 63666310.0
[2026-02-28 07:18:16] 2026-02-28 05:17:44,864 | INFO     | sum of deviations: 362338170.0000002
[2026-02-28 07:18:16] 2026-02-28 05:17:44,864 | INFO     | mean x: 1772253944.0
[2026-02-28 07:18:16] 2026-02-28 05:17:44,864 | INFO     | mean y: 2396598.7288135593
[2026-02-28 07:18:16] 2026-02-28 05:17:44,864 | INFO     | intersect: -10083868033.919802
[2026-02-28 07:18:16] 2026-02-28 05:17:44,864 | INFO     | chi2: 0.0009212014601230028
[2026-02-28 07:18:16] 2026-02-28 05:17:44,864 | INFO     | current memory leak: 5.69 B/s (using 59 data points, chi2=0.00)
[2026-02-28 07:18:16] 2026-02-28 05:17:44,864 | INFO     | could have reported an average CPU frequency of 3756 MHz (6 samples)
[2026-02-28 07:18:16] 2026-02-28 05:17:44,864 | INFO     | ..............................
[2026-02-28 07:18:16] 2026-02-28 05:17:44,864 | INFO     | . Timing measurements:
[2026-02-28 07:18:16] 2026-02-28 05:17:44,864 | INFO     | . get job = 0 s
[2026-02-28 07:18:16] 2026-02-28 05:17:44,864 | INFO     | . initial setup = 3 s
[2026-02-28 07:18:16] 2026-02-28 05:17:44,864 | INFO     | . payload setup = 2 s
[2026-02-28 07:18:16] 2026-02-28 05:17:44,864 | INFO     | . stage-in = 0 s
[2026-02-28 07:18:16] 2026-02-28 05:17:44,864 | INFO     | . payload execution = 3990 s
[2026-02-28 07:18:16] 2026-02-28 05:17:44,864 | INFO     | . stage-out = 0 s
[2026-02-28 07:18:16] 2026-02-28 05:17:44,864 | INFO     | . log creation = 0 s
[2026-02-28 07:18:16] 2026-02-28 05:17:44,864 | INFO     | ..............................
[2026-02-28 07:18:16] 2026-02-28 05:17:45,240 | INFO     | 
[2026-02-28 07:18:16] 2026-02-28 05:17:45,240 | INFO     | job summary report
[2026-02-28 07:18:16] 2026-02-28 05:17:45,240 | INFO     | --------------------------------------------------
[2026-02-28 07:18:16] 2026-02-28 05:17:45,240 | INFO     | PanDA job id: 7030658916
[2026-02-28 07:18:16] 2026-02-28 05:17:45,240 | INFO     | task id: 48838416
[2026-02-28 07:18:16] 2026-02-28 05:17:45,240 | INFO     | errors: (none)
[2026-02-28 07:18:16] 2026-02-28 05:17:45,240 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-28 07:18:16] 2026-02-28 05:17:45,240 | INFO     | pilot state: finished 
[2026-02-28 07:18:16] 2026-02-28 05:17:45,240 | INFO     | transexitcode: 0
[2026-02-28 07:18:16] 2026-02-28 05:17:45,240 | INFO     | exeerrorcode: 0
[2026-02-28 07:18:16] 2026-02-28 05:17:45,240 | INFO     | exeerrordiag: 
[2026-02-28 07:18:16] 2026-02-28 05:17:45,240 | INFO     | exitcode: 0
[2026-02-28 07:18:16] 2026-02-28 05:17:45,240 | INFO     | exitmsg: OK
[2026-02-28 07:18:16] 2026-02-28 05:17:45,240 | INFO     | cpuconsumptiontime: 15286 s
[2026-02-28 07:18:16] 2026-02-28 05:17:45,240 | INFO     | nevents: 400
[2026-02-28 07:18:16] 2026-02-28 05:17:45,240 | INFO     | neventsw: 0
[2026-02-28 07:18:16] 2026-02-28 05:17:45,240 | INFO     | pid: 2312877
[2026-02-28 07:18:16] 2026-02-28 05:17:45,240 | INFO     | pgrp: 2312877
[2026-02-28 07:18:16] 2026-02-28 05:17:45,240 | INFO     | corecount: 4
[2026-02-28 07:18:16] 2026-02-28 05:17:45,240 | INFO     | event service: False
[2026-02-28 07:18:16] 2026-02-28 05:17:45,241 | INFO     | sizes: {0: 2282280, 11: 2282280, 3996: 2317262, 3998: 2317262, 4000: 2317456}
[2026-02-28 07:18:16] 2026-02-28 05:17:45,241 | INFO     | --------------------------------------------------
[2026-02-28 07:18:16] 2026-02-28 05:17:45,241 | INFO     | 
[2026-02-28 07:18:16] 2026-02-28 05:17:45,241 | INFO     | executing command: ls -lF /home/ek/BOINC/slots/0
[2026-02-28 07:18:16] 2026-02-28 05:17:45,249 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-28 07:18:16] 2026-02-28 05:17:45,249 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-28 07:18:16] 2026-02-28 05:17:45,249 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-28 07:18:16] 2026-02-28 05:17:45,249 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-28 07:18:16] 2026-02-28 05:17:45,249 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-28 07:18:16] 2026-02-28 05:17:45,249 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-28 07:18:16] 2026-02-28 05:17:45,249 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-28 07:18:16] 2026-02-28 05:17:45,249 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-28 07:18:16] 2026-02-28 05:17:45,249 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-28 07:18:16] 2026-02-28 05:17:45,249 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-28 07:18:16] 2026-02-28 05:17:45,249 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-28 07:18:16] 2026-02-28 05:17:45,249 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-28 07:18:16] 2026-02-28 05:17:45,250 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-28 07:18:16] 2026-02-28 05:17:45,250 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-28 07:18:16] 2026-02-28 05:17:45,250 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-28 07:18:16] 2026-02-28 05:17:45,250 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-28 07:18:16] 2026-02-28 05:17:45,250 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-28 07:18:16] 2026-02-28 05:17:45,250 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-28 07:18:16] 2026-02-28 05:17:45,250 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-28 07:18:16] 2026-02-28 05:17:45,250 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-28 07:18:16] 2026-02-28 05:17:45,250 | INFO     | job 7030658916 has completed (purged errors)
[2026-02-28 07:18:16] 2026-02-28 05:17:45,250 | INFO     | overall cleanup function is called
[2026-02-28 07:18:16] 2026-02-28 05:17:46,256 | INFO     | --- collectZombieJob: --- 10, [2312877]
[2026-02-28 07:18:16] 2026-02-28 05:17:46,256 | INFO     | zombie collector waiting for pid 2312877
[2026-02-28 07:18:16] 2026-02-28 05:17:46,256 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-28 07:18:16] 2026-02-28 05:17:46,256 | INFO     | collected zombie processes
[2026-02-28 07:18:16] 2026-02-28 05:17:46,256 | INFO     | will attempt to kill all subprocesses of pid=2312877
[2026-02-28 07:18:16] 2026-02-28 05:17:46,355 | INFO     | process IDs to be killed: [2312877] (in reverse order)
[2026-02-28 07:18:16] 2026-02-28 05:17:46,387 | WARNING  | found no corresponding commands to process id(s)
[2026-02-28 07:18:16] 2026-02-28 05:17:46,387 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-28 07:18:16] 2026-02-28 05:17:46,389 | INFO     | did not find any defunct processes belonging to 2312877
[2026-02-28 07:18:16] 2026-02-28 05:17:46,392 | INFO     | did not find any defunct processes belonging to 2312877
[2026-02-28 07:18:16] 2026-02-28 05:17:46,392 | INFO     | ready for new job
[2026-02-28 07:18:16] 2026-02-28 05:17:46,392 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-28 07:18:16] 2026-02-28 05:17:46,392 | INFO     | **************************************
[2026-02-28 07:18:16] 2026-02-28 05:17:46,392 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-28 07:18:16] 2026-02-28 05:17:46,392 | INFO     | **************************************
[2026-02-28 07:18:16] 2026-02-28 05:17:46,392 | INFO     | 
[2026-02-28 07:18:16] 2026-02-28 05:17:46,393 | INFO     | architecture information:
[2026-02-28 07:18:16] 2026-02-28 05:17:46,393 | INFO     | executing command: cat /etc/os-release
[2026-02-28 07:18:16] 2026-02-28 05:17:46,399 | INFO     | cat /etc/os-release:
[2026-02-28 07:18:16] NAME="CentOS Linux"
[2026-02-28 07:18:16] VERSION="7 (Core)"
[2026-02-28 07:18:16] ID="centos"
[2026-02-28 07:18:16] ID_LIKE="rhel fedora"
[2026-02-28 07:18:16] VERSION_ID="7"
[2026-02-28 07:18:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-28 07:18:16] ANSI_COLOR="0;31"
[2026-02-28 07:18:16] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-28 07:18:16] HOME_URL="https://www.centos.org/"
[2026-02-28 07:18:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-28 07:18:16] 
[2026-02-28 07:18:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-28 07:18:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-28 07:18:16] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-28 07:18:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-28 07:18:16] 
[2026-02-28 07:18:16] 2026-02-28 05:17:46,399 | INFO     | **************************************
[2026-02-28 07:18:16] 2026-02-28 05:17:46,902 | INFO     | executing command: df -mP /home/ek/BOINC/slots/0
[2026-02-28 07:18:16] 2026-02-28 05:17:46,908 | INFO     | sufficient remaining disk space (60831039488 B)
[2026-02-28 07:18:16] 2026-02-28 05:17:46,909 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-28 07:18:16] 2026-02-28 05:17:46,909 | INFO     | current server update state: UPDATING_FINAL
[2026-02-28 07:18:16] 2026-02-28 05:17:46,909 | INFO     | update_server=False
[2026-02-28 07:18:16] 2026-02-28 05:17:46,909 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-28 07:18:16] 2026-02-28 05:17:47,132 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-28 07:18:16] 2026-02-28 05:17:47,637 | INFO     | all payload control threads have been joined
[2026-02-28 07:18:16] 2026-02-28 05:17:47,830 | INFO     | all data control threads have been joined
[2026-02-28 07:18:16] 2026-02-28 05:17:47,914 | INFO     | [job] retrieve thread has finished
[2026-02-28 07:18:16] 2026-02-28 05:17:47,975 | INFO     | [payload] validate_pre thread has finished
[2026-02-28 07:18:16] 2026-02-28 05:17:48,005 | WARNING  | process 2312877 can no longer be monitored (due to stat problems) - aborting
[2026-02-28 07:18:16] 2026-02-28 05:17:48,038 | INFO     | all job control threads have been joined
[2026-02-28 07:18:16] 2026-02-28 05:17:48,062 | INFO     | using path: /home/ek/BOINC/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-02-28 07:18:16] 2026-02-28 05:17:48,068 | INFO     | [payload] failed_post thread has finished
[2026-02-28 07:18:16] 2026-02-28 05:17:48,119 | INFO     | [data] copytool_in thread has finished
[2026-02-28 07:18:16] 2026-02-28 05:17:48,151 | INFO     | number of running child processes to parent process 2312877: 1
[2026-02-28 07:18:16] 2026-02-28 05:17:48,151 | INFO     | maximum number of monitored processes: 6
[2026-02-28 07:18:16] 2026-02-28 05:17:48,151 | INFO     | aborting job monitoring since job object (job id=7030658916) has expired
[2026-02-28 07:18:16] 2026-02-28 05:17:48,151 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-28 07:18:16] 2026-02-28 05:17:48,151 | INFO     | will abort loop
[2026-02-28 07:18:16] 2026-02-28 05:17:48,179 | INFO     | [payload] execute_payloads thread has finished
[2026-02-28 07:18:16] 2026-02-28 05:17:48,606 | INFO     | [payload] validate_post thread has finished
[2026-02-28 07:18:16] 2026-02-28 05:17:48,642 | INFO     | [payload] control thread has finished
[2026-02-28 07:18:16] 2026-02-28 05:17:48,835 | INFO     | [data] control thread has finished
[2026-02-28 07:18:16] 2026-02-28 05:17:49,043 | INFO     | [job] control thread has finished
[2026-02-28 07:18:16] 2026-02-28 05:17:49,137 | INFO     | [data] copytool_out thread has finished
[2026-02-28 07:18:16] 2026-02-28 05:17:49,156 | INFO     | [job] job monitor thread has finished
[2026-02-28 07:18:16] 2026-02-28 05:17:49,353 | INFO     | [job] validate thread has finished
[2026-02-28 07:18:16] 2026-02-28 05:17:49,404 | INFO     | [job] create_data_payload thread has finished
[2026-02-28 07:18:16] 2026-02-28 05:17:49,488 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-28 07:18:16] 2026-02-28 05:17:49,901 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-28 07:18:16] 2026-02-28 05:17:50,906 | INFO     | [job] queue monitor thread has finished
[2026-02-28 07:18:16] 2026-02-28 05:17:53,494 | INFO     | [data] queue_monitor thread has finished
[2026-02-28 07:18:16] 2026-02-28 05:17:57,425 | INFO     | job.realtimelogging is not enabled
[2026-02-28 07:18:16] 2026-02-28 05:17:57,681 | INFO     | [monitor] cgroup control has ended
[2026-02-28 07:18:16] 2026-02-28 05:17:58,430 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-28 07:18:16] 2026-02-28 05:18:00,195 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140233992181568)>', '<ExcThread(monitor, started 140233358173952)>']
[2026-02-28 07:18:16] 2026-02-28 05:18:05,202 | INFO     | all workflow threads have been joined
[2026-02-28 07:18:16] 2026-02-28 05:18:05,202 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-28 07:18:16] 2026-02-28 05:18:05,202 | INFO     | traces error code: 0
[2026-02-28 07:18:16] 2026-02-28 05:18:05,202 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-28 07:18:16] 2026-02-28 05:18:16,624 | INFO     | PID=2308206 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-28 07:18:16] 2026-02-28 05:18:16,624 | INFO     | found 0 job(s) in 20 queues
[2026-02-28 07:18:16] 2026-02-28 05:18:16,624 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-28 07:18:16] 2026-02-28 05:18:16,624 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-28 07:18:16] 2026-02-28 05:18:16,624 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-28 07:18:16] 2026-02-28 05:18:16,624 | INFO     | [monitor] control thread has ended
[2026-02-28 07:18:16] 2026-02-28 05:18:16,667 [wrapper] ==== pilot stdout END ====
[2026-02-28 07:18:16] 2026-02-28 05:18:16,668 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-28 07:18:16] 2026-02-28 05:18:16,670 [wrapper] pilotpid: 2308206
[2026-02-28 07:18:16] 2026-02-28 05:18:16,671 [wrapper] Pilot exit status: 0
[2026-02-28 07:18:16] 2026-02-28 05:18:16,677 [wrapper] pandaids: 7030658916
[2026-02-28 07:18:16] 2026-02-28 05:18:16,697 [wrapper] cleanup supervisor_pilot 2357411 2308207
[2026-02-28 07:18:16] 2026-02-28 05:18:16,699 [wrapper] Test setup, not cleaning
[2026-02-28 07:18:16] 2026-02-28 05:18:16,700 [wrapper] apfmon messages muted
[2026-02-28 07:18:16] 2026-02-28 05:18:16,701 [wrapper] ==== wrapper stdout END ====
[2026-02-28 07:18:16] 2026-02-28 05:18:16,703 [wrapper] ==== wrapper stderr END ====
[2026-02-28 07:18:16]  *** Error codes and diagnostics ***
[2026-02-28 07:18:16]     "exeErrorCode": 0,
[2026-02-28 07:18:16]     "exeErrorDiag": "",
[2026-02-28 07:18:16]     "pilotErrorCode": 0,
[2026-02-28 07:18:16]     "pilotErrorDiag": "",
[2026-02-28 07:18:16]  *** Listing of results directory ***
[2026-02-28 07:18:16] total 510380
[2026-02-28 07:18:16] -rw-r--r-- 1 ek ek    584627 Feb 26 14:16 pilot3.tar.gz
[2026-02-28 07:18:16] -rwx------ 1 ek ek     36322 Feb 26 14:19 runpilot2-wrapper.sh
[2026-02-28 07:18:16] -rw-r--r-- 1 ek ek      5111 Feb 26 14:21 queuedata.json
[2026-02-28 07:18:16] -rw-rw-r-- 1 ek ek       100 Feb 28 06:10 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-28 07:18:16] -rwxr-xr-x 1 ek ek      7986 Feb 28 06:10 run_atlas
[2026-02-28 07:18:16] -rw-rw-r-- 1 ek ek       105 Feb 28 06:10 job.xml
[2026-02-28 07:18:16] -rw-r--r-- 2 ek ek 290870784 Feb 28 06:10 EVNT.48220085._000221.pool.root.1
[2026-02-28 07:18:16] -rw-r--r-- 2 ek ek    597967 Feb 28 06:10 input.tar.gz
[2026-02-28 07:18:16] -rw-r--r-- 2 ek ek     15845 Feb 28 06:10 start_atlas.sh
[2026-02-28 07:18:16] drwxrwx--x 2 ek ek      4096 Feb 28 06:10 shared
[2026-02-28 07:18:16] -rw-rw-r-- 1 ek ek         0 Feb 28 06:10 boinc_setup_complete
[2026-02-28 07:18:16] -rw-rw-r-- 1 ek ek      9840 Feb 28 06:10 init_data.xml
[2026-02-28 07:18:16] -rw-rw-r-- 1 ek ek         0 Feb 28 06:10 boinc_lockfile
[2026-02-28 07:18:16] -rw-rw-r-- 1 ek ek      2568 Feb 28 06:10 pandaJob.out
[2026-02-28 07:18:16] -rw------- 1 ek ek        50 Feb 28 06:10 setup.sh.local
[2026-02-28 07:18:16] -rw------- 1 ek ek    998782 Feb 28 06:10 agis_schedconf.cvmfs.json
[2026-02-28 07:18:16] -rw------- 1 ek ek   1513015 Feb 28 06:10 agis_ddmendpoints.agis.ALL.json
[2026-02-28 07:18:16] -rw------- 1 ek ek       432 Feb 28 06:10 workernode_map.json
[2026-02-28 07:18:16] drwx------ 5 ek ek      4096 Feb 28 06:10 pilot3
[2026-02-28 07:18:16] -rw------- 1 ek ek        95 Feb 28 07:17 pilot_heartbeat.json
[2026-02-28 07:18:16] -rw------- 1 ek ek 226116723 Feb 28 07:17 HITS.48838416._005234.pool.root.1
[2026-02-28 07:18:16] -rw------- 1 ek ek      1027 Feb 28 07:17 memory_monitor_summary.json
[2026-02-28 07:18:16] -rw------- 1 ek ek    254348 Feb 28 07:17 log.48838416._005234.job.log.tgz.1
[2026-02-28 07:18:16] -rw------- 1 ek ek      6312 Feb 28 07:17 heartbeat.json
[2026-02-28 07:18:16] -rw-rw-r-- 1 ek ek       529 Feb 28 07:17 boinc_task_state.xml
[2026-02-28 07:18:16] -rw-rw-r-- 1 ek ek        27 Feb 28 07:18 wrapper_checkpoint.txt
[2026-02-28 07:18:16] -rw-rw-r-- 1 ek ek      8192 Feb 28 07:18 boinc_mmap_file
[2026-02-28 07:18:16] -rw------- 1 ek ek       747 Feb 28 07:18 pilotlog.txt
[2026-02-28 07:18:16] -rw------- 1 ek ek    597043 Feb 28 07:18 log.48838416._005234.job.log.1
[2026-02-28 07:18:16] -rw------- 1 ek ek       357 Feb 28 07:18 output.list
[2026-02-28 07:18:16] -rw-rw-r-- 1 ek ek       620 Feb 28 07:18 runtime_log
[2026-02-28 07:18:16] -rw------- 1 ek ek    870400 Feb 28 07:18 result.tar.gz
[2026-02-28 07:18:16] -rw-rw-r-- 1 ek ek      9501 Feb 28 07:18 runtime_log.err
[2026-02-28 07:18:16] -rw------- 1 ek ek       660 Feb 28 07:18 0OdMDmXWpF9n9Rq4apOajLDm4fhM0noT9bVooX4SDm180KDmc0SVWm.diag
[2026-02-28 07:18:16] -rw-rw-r-- 1 ek ek     21363 Feb 28 07:18 stderr.txt
[2026-02-28 07:18:16] HITS file was successfully produced:
[2026-02-28 07:18:16] -rw------- 1 ek ek 226116723 Feb 28 07:17 shared/HITS.pool.root.1
[2026-02-28 07:18:16]  *** Contents of shared directory: ***
[2026-02-28 07:18:16] total 506336
[2026-02-28 07:18:16] -rw-r--r-- 2 ek ek 290870784 Feb 28 06:10 ATLAS.root_0
[2026-02-28 07:18:16] -rw-r--r-- 2 ek ek    597967 Feb 28 06:10 input.tar.gz
[2026-02-28 07:18:16] -rw-r--r-- 2 ek ek     15845 Feb 28 06:10 start_atlas.sh
[2026-02-28 07:18:16] -rw------- 1 ek ek 226116723 Feb 28 07:17 HITS.pool.root.1
[2026-02-28 07:18:16] -rw------- 1 ek ek    870400 Feb 28 07:18 result.tar.gz
07:18:18 (2304049): run_atlas exited; CPU time 15323.836650
07:18:18 (2304049): called boinc_finish(0)

</stderr_txt>
]]>

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