Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
12:09:18 (14410): wrapper (7.7.26015): starting
12:09:18 (14410): wrapper: running run_atlas (--nthreads 8)
[2026-02-26 12:09:18] Arguments: --nthreads 8
[2026-02-26 12:09:18] Threads: 8
[2026-02-26 12:09:18] Checking for CVMFS
[2026-02-26 12:09:19] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-26 12:09:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-26 12:09:19] Running cvmfs_config stat atlas.cern.ch
[2026-02-26 12:09:19] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-26 12:09:19] 2.11.2.0 2964 95070 78256 156661 2 50 19356268 20275201 1 130560 0 22640035 99.808 7477352 26384 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-02-26 12:09:19] CVMFS is ok
[2026-02-26 12:09:19] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-26 12:09:19] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-26 12:09:19] Further information can be found at the LHC@home message board.
[2026-02-26 12:09:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-26 12:09:19] Checking for apptainer binary...
[2026-02-26 12:09:19] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-26 12:09:19] Running /usr/bin/apptainer --version
[2026-02-26 12:09:19] apptainer version 1.3.2-1.el7
[2026-02-26 12:09:19] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-26 12:09:21] c-204-16.aglt2.org
[2026-02-26 12:09:21] apptainer works
[2026-02-26 12:09:21] Set ATHENA_PROC_NUMBER=8
[2026-02-26 12:09:21] Set ATHENA_CORE_NUMBER=8
[2026-02-26 12:09:21] Starting ATLAS job with PandaID=7030659277
[2026-02-26 12:09:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
12:48:46 (9943): wrapper (7.7.26015): starting
12:48:46 (9943): wrapper: running run_atlas (--nthreads 8)
[2026-02-26 12:48:46] Arguments: --nthreads 8
[2026-02-26 12:48:46] Threads: 8
[2026-02-26 12:48:46] This job has been restarted, cleaning up previous attempt
[2026-02-26 12:48:46] Checking for CVMFS
[2026-02-26 12:48:46] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-26 12:48:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-26 12:48:47] Running cvmfs_config stat atlas.cern.ch
[2026-02-26 12:48:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-26 12:48:47] 2.11.2.0 2964 95109 78240 156662 2 32 19442548 20275201 1 130560 0 22690608 99.808 7479128 26385 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-02-26 12:48:47] CVMFS is ok
[2026-02-26 12:48:47] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-26 12:48:47] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-26 12:48:47] Further information can be found at the LHC@home message board.
[2026-02-26 12:48:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-26 12:48:47] Checking for apptainer binary...
[2026-02-26 12:48:47] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-26 12:48:47] Running /usr/bin/apptainer --version
[2026-02-26 12:48:47] apptainer version 1.3.2-1.el7
[2026-02-26 12:48:47] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-26 12:48:48] c-204-16.aglt2.org
[2026-02-26 12:48:48] apptainer works
[2026-02-26 12:48:48] Set ATHENA_PROC_NUMBER=8
[2026-02-26 12:48:48] Set ATHENA_CORE_NUMBER=8
[2026-02-26 12:48:48] Starting ATLAS job with PandaID=7030659277
[2026-02-26 12:48:48] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-26 15:12:36]  *** The last 200 lines of the pilot log: ***
[2026-02-26 15:12:36] 2026-02-26 20:12:05,138 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-26 15:12:36] 2026-02-26 20:12:05,138 | INFO     | log transfer has been attempted: DONE
[2026-02-26 15:12:36] 2026-02-26 20:12:05,139 | INFO     | job 7030659277 has finished - writing final server update
[2026-02-26 15:12:36] 2026-02-26 20:12:05,139 | INFO     | total number of processed events: 400 (read)
[2026-02-26 15:12:36] 2026-02-26 20:12:05,141 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7030659277/memory_monitor_summary.json (trf name=prmon)
[2026-02-26 15:12:36] 2026-02-26 20:12:05,141 | INFO     | extracted standard info from prmon json
[2026-02-26 15:12:36] 2026-02-26 20:12:05,141 | INFO     | extracted standard memory fields from prmon json
[2026-02-26 15:12:36] 2026-02-26 20:12:05,141 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-26 15:12:36] 2026-02-26 20:12:05,142 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-26 15:12:36] 2026-02-26 20:12:05,142 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-26 15:12:36] 2026-02-26 20:12:05,144 | INFO     | fitting pss+swap vs Time
[2026-02-26 15:12:36] 2026-02-26 20:12:05,145 | INFO     | sum of square deviations: 869188390.0
[2026-02-26 15:12:36] 2026-02-26 20:12:05,145 | INFO     | sum of deviations: -1023777518.000001
[2026-02-26 15:12:36] 2026-02-26 20:12:05,146 | INFO     | mean x: 1772132443.0
[2026-02-26 15:12:36] 2026-02-26 20:12:05,146 | INFO     | mean y: 2524467.929078014
[2026-02-26 15:12:36] 2026-02-26 20:12:05,146 | INFO     | intersect: 2089838765.8821583
[2026-02-26 15:12:36] 2026-02-26 20:12:05,146 | INFO     | chi2: 2.407145124273562
[2026-02-26 15:12:36] 2026-02-26 20:12:05,146 | INFO     | sum of square deviations: 779958810.0
[2026-02-26 15:12:36] 2026-02-26 20:12:05,147 | INFO     | sum of deviations: 8203803349.5
[2026-02-26 15:12:36] 2026-02-26 20:12:05,147 | INFO     | mean x: 1772132290.5
[2026-02-26 15:12:36] 2026-02-26 20:12:05,147 | INFO     | mean y: 2539772.992647059
[2026-02-26 15:12:36] 2026-02-26 20:12:05,148 | INFO     | intersect: -18637194318.299957
[2026-02-26 15:12:36] 2026-02-26 20:12:05,148 | INFO     | chi2: 1.6465673203600992
[2026-02-26 15:12:36] 2026-02-26 20:12:05,148 | INFO     | current chi2=1.6465673203600992 (change=31.596674261299178 %)
[2026-02-26 15:12:36] 2026-02-26 20:12:05,148 | INFO     | sum of square deviations: 697054930.0
[2026-02-26 15:12:36] 2026-02-26 20:12:05,149 | INFO     | sum of deviations: 7883758156.999998
[2026-02-26 15:12:36] 2026-02-26 20:12:05,149 | INFO     | mean x: 1772132138.0
[2026-02-26 15:12:36] 2026-02-26 20:12:05,149 | INFO     | mean y: 2539184.0152671756
[2026-02-26 15:12:36] 2026-02-26 20:12:05,149 | INFO     | intersect: -20040445374.230877
[2026-02-26 15:12:36] 2026-02-26 20:12:05,150 | INFO     | chi2: 1.6484818198721594
[2026-02-26 15:12:36] 2026-02-26 20:12:05,150 | INFO     | current chi2=1.6484818198721594 (change=-0.11627216745935631 %)
[2026-02-26 15:12:36] 2026-02-26 20:12:05,150 | INFO     | right removable region: 130
[2026-02-26 15:12:36] 2026-02-26 20:12:05,150 | INFO     | sum of square deviations: 779958810.0
[2026-02-26 15:12:36] 2026-02-26 20:12:05,151 | INFO     | sum of deviations: -22781275635.0
[2026-02-26 15:12:36] 2026-02-26 20:12:05,151 | INFO     | mean x: 1772132595.5
[2026-02-26 15:12:36] 2026-02-26 20:12:05,151 | INFO     | mean y: 2561048.882352941
[2026-02-26 15:12:36] 2026-02-26 20:12:05,151 | INFO     | intersect: 51763552273.34646
[2026-02-26 15:12:36] 2026-02-26 20:12:05,151 | INFO     | chi2: 0.9209809776812719
[2026-02-26 15:12:36] 2026-02-26 20:12:05,151 | INFO     | current chi2=0.9209809776812719 (change=61.73969868313572 %)
[2026-02-26 15:12:36] 2026-02-26 20:12:05,152 | INFO     | sum of square deviations: 697054930.0
[2026-02-26 15:12:36] 2026-02-26 20:12:05,152 | INFO     | sum of deviations: -21812535611.0
[2026-02-26 15:12:36] 2026-02-26 20:12:05,152 | INFO     | mean x: 1772132748.0
[2026-02-26 15:12:36] 2026-02-26 20:12:05,153 | INFO     | mean y: 2559157.618320611
[2026-02-26 15:12:36] 2026-02-26 20:12:05,153 | INFO     | intersect: 55456881348.7967
[2026-02-26 15:12:36] 2026-02-26 20:12:05,153 | INFO     | chi2: 0.9043356075713451
[2026-02-26 15:12:36] 2026-02-26 20:12:05,153 | INFO     | current chi2=0.9043356075713451 (change=1.8073522160940079 %)
[2026-02-26 15:12:36] 2026-02-26 20:12:05,153 | INFO     | left removable region: 20
[2026-02-26 15:12:36] 2026-02-26 20:12:05,153 | INFO     | sum of square deviations: 412686807.5
[2026-02-26 15:12:36] 2026-02-26 20:12:05,154 | INFO     | sum of deviations: -3856826595.499998
[2026-02-26 15:12:36] 2026-02-26 20:12:05,154 | INFO     | mean x: 1772132717.5
[2026-02-26 15:12:36] 2026-02-26 20:12:05,154 | INFO     | mean y: 2557811.845454545
[2026-02-26 15:12:36] 2026-02-26 20:12:05,154 | INFO     | intersect: 16564290514.21609
[2026-02-26 15:12:36] 2026-02-26 20:12:05,155 | INFO     | chi2: 0.06044860895828613
[2026-02-26 15:12:36] 2026-02-26 20:12:05,155 | INFO     | current memory leak: -9.35 B/s (using 110 data points, chi2=0.06)
[2026-02-26 15:12:36] 2026-02-26 20:12:05,155 | INFO     | could have reported an average CPU frequency of 1762 MHz (8 samples)
[2026-02-26 15:12:36] 2026-02-26 20:12:05,155 | INFO     | ..............................
[2026-02-26 15:12:36] 2026-02-26 20:12:05,155 | INFO     | . Timing measurements:
[2026-02-26 15:12:36] 2026-02-26 20:12:05,156 | INFO     | . get job = 0 s
[2026-02-26 15:12:36] 2026-02-26 20:12:05,156 | INFO     | . initial setup = 1 s
[2026-02-26 15:12:36] 2026-02-26 20:12:05,156 | INFO     | . payload setup = 8 s
[2026-02-26 15:12:36] 2026-02-26 20:12:05,156 | INFO     | . stage-in = 0 s
[2026-02-26 15:12:36] 2026-02-26 20:12:05,156 | INFO     | . payload execution = 8551 s
[2026-02-26 15:12:36] 2026-02-26 20:12:05,156 | INFO     | . stage-out = 2 s
[2026-02-26 15:12:36] 2026-02-26 20:12:05,156 | INFO     | . log creation = 0 s
[2026-02-26 15:12:36] 2026-02-26 20:12:05,156 | INFO     | ..............................
[2026-02-26 15:12:36] 2026-02-26 20:12:05,246 | INFO     | 
[2026-02-26 15:12:36] 2026-02-26 20:12:05,246 | INFO     | job summary report
[2026-02-26 15:12:36] 2026-02-26 20:12:05,246 | INFO     | --------------------------------------------------
[2026-02-26 15:12:36] 2026-02-26 20:12:05,246 | INFO     | PanDA job id: 7030659277
[2026-02-26 15:12:36] 2026-02-26 20:12:05,246 | INFO     | task id: 48838447
[2026-02-26 15:12:36] 2026-02-26 20:12:05,247 | INFO     | errors: (none)
[2026-02-26 15:12:36] 2026-02-26 20:12:05,247 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-26 15:12:36] 2026-02-26 20:12:05,247 | INFO     | pilot state: finished 
[2026-02-26 15:12:36] 2026-02-26 20:12:05,247 | INFO     | transexitcode: 0
[2026-02-26 15:12:36] 2026-02-26 20:12:05,247 | INFO     | exeerrorcode: 0
[2026-02-26 15:12:36] 2026-02-26 20:12:05,248 | INFO     | exeerrordiag: 
[2026-02-26 15:12:36] 2026-02-26 20:12:05,248 | INFO     | exitcode: 0
[2026-02-26 15:12:36] 2026-02-26 20:12:05,248 | INFO     | exitmsg: OK
[2026-02-26 15:12:36] 2026-02-26 20:12:05,248 | INFO     | cpuconsumptiontime: 62714 s
[2026-02-26 15:12:36] 2026-02-26 20:12:05,248 | INFO     | nevents: 400
[2026-02-26 15:12:36] 2026-02-26 20:12:05,248 | INFO     | neventsw: 0
[2026-02-26 15:12:36] 2026-02-26 20:12:05,249 | INFO     | pid: 16495
[2026-02-26 15:12:36] 2026-02-26 20:12:05,249 | INFO     | pgrp: 16495
[2026-02-26 15:12:36] 2026-02-26 20:12:05,249 | INFO     | corecount: 8
[2026-02-26 15:12:36] 2026-02-26 20:12:05,249 | INFO     | event service: False
[2026-02-26 15:12:36] 2026-02-26 20:12:05,249 | INFO     | sizes: {0: 2282222, 1: 2282282, 11: 2282310, 8563: 2310216, 8566: 2319270, 8567: 2319408}
[2026-02-26 15:12:36] 2026-02-26 20:12:05,249 | INFO     | --------------------------------------------------
[2026-02-26 15:12:36] 2026-02-26 20:12:05,249 | INFO     | 
[2026-02-26 15:12:36] 2026-02-26 20:12:05,250 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-02-26 15:12:36] 2026-02-26 20:12:05,277 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-26 15:12:36] 2026-02-26 20:12:05,278 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-26 15:12:36] 2026-02-26 20:12:05,278 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-26 15:12:36] 2026-02-26 20:12:05,278 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-26 15:12:36] 2026-02-26 20:12:05,278 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-26 15:12:36] 2026-02-26 20:12:05,278 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-26 15:12:36] 2026-02-26 20:12:05,279 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-26 15:12:36] 2026-02-26 20:12:05,279 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-26 15:12:36] 2026-02-26 20:12:05,279 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-26 15:12:36] 2026-02-26 20:12:05,279 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-26 15:12:36] 2026-02-26 20:12:05,279 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-26 15:12:36] 2026-02-26 20:12:05,279 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-26 15:12:36] 2026-02-26 20:12:05,280 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-26 15:12:36] 2026-02-26 20:12:05,280 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-26 15:12:36] 2026-02-26 20:12:05,280 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-26 15:12:36] 2026-02-26 20:12:05,280 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-26 15:12:36] 2026-02-26 20:12:05,280 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-26 15:12:36] 2026-02-26 20:12:05,281 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-26 15:12:36] 2026-02-26 20:12:05,281 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-26 15:12:36] 2026-02-26 20:12:05,281 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-26 15:12:36] 2026-02-26 20:12:05,281 | INFO     | job 7030659277 has completed (purged errors)
[2026-02-26 15:12:36] 2026-02-26 20:12:05,281 | INFO     | overall cleanup function is called
[2026-02-26 15:12:36] 2026-02-26 20:12:06,286 | INFO     | --- collectZombieJob: --- 10, [16495]
[2026-02-26 15:12:36] 2026-02-26 20:12:06,287 | INFO     | zombie collector waiting for pid 16495
[2026-02-26 15:12:36] 2026-02-26 20:12:06,287 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-26 15:12:36] 2026-02-26 20:12:06,287 | INFO     | collected zombie processes
[2026-02-26 15:12:36] 2026-02-26 20:12:06,287 | INFO     | will attempt to kill all subprocesses of pid=16495
[2026-02-26 15:12:36] 2026-02-26 20:12:06,376 | INFO     | process IDs to be killed: [16495] (in reverse order)
[2026-02-26 15:12:36] 2026-02-26 20:12:06,430 | WARNING  | found no corresponding commands to process id(s)
[2026-02-26 15:12:36] 2026-02-26 20:12:06,430 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-26 15:12:36] 2026-02-26 20:12:06,434 | INFO     | did not find any defunct processes belonging to 16495
[2026-02-26 15:12:36] 2026-02-26 20:12:06,437 | INFO     | did not find any defunct processes belonging to 16495
[2026-02-26 15:12:36] 2026-02-26 20:12:06,438 | INFO     | ready for new job
[2026-02-26 15:12:36] 2026-02-26 20:12:06,438 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-26 15:12:36] 2026-02-26 20:12:06,440 | INFO     | **************************************
[2026-02-26 15:12:36] 2026-02-26 20:12:06,440 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-26 15:12:36] 2026-02-26 20:12:06,440 | INFO     | **************************************
[2026-02-26 15:12:36] 2026-02-26 20:12:06,440 | INFO     | 
[2026-02-26 15:12:36] 2026-02-26 20:12:06,441 | INFO     | architecture information:
[2026-02-26 15:12:36] 2026-02-26 20:12:06,441 | INFO     | executing command: cat /etc/os-release
[2026-02-26 15:12:36] 2026-02-26 20:12:06,458 | INFO     | cat /etc/os-release:
[2026-02-26 15:12:36] NAME="CentOS Linux"
[2026-02-26 15:12:36] VERSION="7 (Core)"
[2026-02-26 15:12:36] ID="centos"
[2026-02-26 15:12:36] ID_LIKE="rhel fedora"
[2026-02-26 15:12:36] VERSION_ID="7"
[2026-02-26 15:12:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-26 15:12:36] ANSI_COLOR="0;31"
[2026-02-26 15:12:36] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-26 15:12:36] HOME_URL="https://www.centos.org/"
[2026-02-26 15:12:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-26 15:12:36] 
[2026-02-26 15:12:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-26 15:12:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-26 15:12:36] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-26 15:12:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-26 15:12:36] 
[2026-02-26 15:12:36] 2026-02-26 20:12:06,458 | INFO     | **************************************
[2026-02-26 15:12:36] 2026-02-26 20:12:06,961 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-02-26 15:12:36] 2026-02-26 20:12:06,980 | INFO     | sufficient remaining disk space (18539872256 B)
[2026-02-26 15:12:36] 2026-02-26 20:12:06,981 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-26 15:12:36] 2026-02-26 20:12:06,981 | INFO     | current server update state: UPDATING_FINAL
[2026-02-26 15:12:36] 2026-02-26 20:12:06,982 | INFO     | update_server=False
[2026-02-26 15:12:36] 2026-02-26 20:12:06,982 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-26 15:12:36] 2026-02-26 20:12:06,982 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-26 15:12:36] 2026-02-26 20:12:06,983 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-26 15:12:36] 2026-02-26 20:12:06,983 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-26 15:12:36] 2026-02-26 20:12:06,984 | INFO     | aborting loop
[2026-02-26 15:12:36] 2026-02-26 20:12:07,123 | INFO     | all data control threads have been joined
[2026-02-26 15:12:36] 2026-02-26 20:12:07,442 | INFO     | all job control threads have been joined
[2026-02-26 15:12:36] 2026-02-26 20:12:07,987 | INFO     | [job] retrieve thread has finished
[2026-02-26 15:12:36] 2026-02-26 20:12:07,988 | INFO     | [job] queue monitor thread has finished
[2026-02-26 15:12:36] 2026-02-26 20:12:07,989 | INFO     | [job] job monitor thread has finished
[2026-02-26 15:12:36] 2026-02-26 20:12:08,083 | INFO     | [job] validate thread has finished
[2026-02-26 15:12:36] 2026-02-26 20:12:08,111 | INFO     | [job] create_data_payload thread has finished
[2026-02-26 15:12:36] 2026-02-26 20:12:08,128 | INFO     | [data] control thread has finished
[2026-02-26 15:12:36] 2026-02-26 20:12:08,210 | INFO     | [payload] execute_payloads thread has finished
[2026-02-26 15:12:36] 2026-02-26 20:12:08,322 | INFO     | all payload control threads have been joined
[2026-02-26 15:12:36] 2026-02-26 20:12:08,448 | INFO     | [job] control thread has finished
[2026-02-26 15:12:36] 2026-02-26 20:12:08,494 | INFO     | [payload] validate_pre thread has finished
[2026-02-26 15:12:36] 2026-02-26 20:12:08,656 | INFO     | [payload] validate_post thread has finished
[2026-02-26 15:12:36] 2026-02-26 20:12:08,727 | INFO     | [data] copytool_in thread has finished
[2026-02-26 15:12:36] 2026-02-26 20:12:08,808 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-26 15:12:36] 2026-02-26 20:12:08,989 | INFO     | [data] copytool_out thread has finished
[2026-02-26 15:12:36] 2026-02-26 20:12:09,108 | INFO     | [payload] failed_post thread has finished
[2026-02-26 15:12:36] 2026-02-26 20:12:09,327 | INFO     | [payload] control thread has finished
[2026-02-26 15:12:36] 2026-02-26 20:12:09,806 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-26 15:12:36] 2026-02-26 20:12:13,812 | INFO     | [data] queue_monitor thread has finished
[2026-02-26 15:12:36] 2026-02-26 20:12:19,787 | INFO     | [monitor] cgroup control has ended
[2026-02-26 15:12:36] 2026-02-26 20:12:19,824 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140440433813312)>', '<ExcThread(monitor, started 140439189452544)>']
[2026-02-26 15:12:36] 2026-02-26 20:12:24,849 | INFO     | all workflow threads have been joined
[2026-02-26 15:12:36] 2026-02-26 20:12:24,849 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-26 15:12:36] 2026-02-26 20:12:24,856 | INFO     | traces error code: 0
[2026-02-26 15:12:36] 2026-02-26 20:12:24,857 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-26 15:12:36] 2026-02-26 20:12:36,606 | INFO     | PID=14114 has CPU usage=4.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-02-26 15:12:36] 2026-02-26 20:12:36,607 | INFO     | found 0 job(s) in 20 queues
[2026-02-26 15:12:36] 2026-02-26 20:12:36,607 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-26 15:12:36] 2026-02-26 20:12:36,607 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-26 15:12:36] 2026-02-26 20:12:36,607 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-26 15:12:36] 2026-02-26 20:12:36,608 | CRITICAL | thread 'MainThread' is not alive
[2026-02-26 15:12:36] 2026-02-26 20:12:36,608 | INFO     | [monitor] control thread has ended
[2026-02-26 15:12:36] 2026-02-26 20:12:36,715 [wrapper] ==== pilot stdout END ====
[2026-02-26 15:12:36] 2026-02-26 20:12:36,720 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-26 15:12:36] 2026-02-26 20:12:36,725 [wrapper] pilotpid: 14114
[2026-02-26 15:12:36] 2026-02-26 20:12:36,729 [wrapper] Pilot exit status: 0
[2026-02-26 15:12:36] 2026-02-26 20:12:36,747 [wrapper] pandaids: 7030659277 7030659277
[2026-02-26 15:12:36] 2026-02-26 20:12:36,794 [wrapper] cleanup supervisor_pilot  6553 14115
[2026-02-26 15:12:36] 2026-02-26 20:12:36,800 [wrapper] Test setup, not cleaning
[2026-02-26 15:12:36] 2026-02-26 20:12:36,805 [wrapper] apfmon messages muted
[2026-02-26 15:12:36] 2026-02-26 20:12:36,810 [wrapper] ==== wrapper stdout END ====
[2026-02-26 15:12:36] 2026-02-26 20:12:36,815 [wrapper] ==== wrapper stderr END ====
[2026-02-26 15:12:36]  *** Error codes and diagnostics ***
[2026-02-26 15:12:36]     "exeErrorCode": 0,
[2026-02-26 15:12:36]     "exeErrorDiag": "",
[2026-02-26 15:12:36]     "pilotErrorCode": 0,
[2026-02-26 15:12:36]     "pilotErrorDiag": "",
[2026-02-26 15:12:36]  *** Listing of results directory ***
[2026-02-26 15:12:36] total 765636
[2026-02-26 15:12:36] drwx------ 5 boincer umatlas      4096 Feb  2 10:00 pilot3
[2026-02-26 15:12:36] -rw-r--r-- 1 boincer umatlas    584627 Feb 26 07:16 pilot3.tar.gz
[2026-02-26 15:12:36] -rwx------ 1 boincer umatlas     36322 Feb 26 07:16 runpilot2-wrapper.sh
[2026-02-26 15:12:36] -rw-r--r-- 1 boincer umatlas      5111 Feb 26 07:17 queuedata.json
[2026-02-26 15:12:36] -rw-r--r-- 1 boincer umatlas       100 Feb 26 12:09 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-26 15:12:36] -rwxr-xr-x 1 boincer umatlas      7986 Feb 26 12:09 run_atlas
[2026-02-26 15:12:36] -rw-r--r-- 1 boincer umatlas       105 Feb 26 12:09 job.xml
[2026-02-26 15:12:36] -rw-r--r-- 3 boincer umatlas 281614123 Feb 26 12:09 EVNT.48220117._000047.pool.root.1
[2026-02-26 15:12:36] -rw-r--r-- 3 boincer umatlas 281614123 Feb 26 12:09 ATLAS.root_0
[2026-02-26 15:12:36] -rw-r--r-- 2 boincer umatlas     15845 Feb 26 12:09 start_atlas.sh
[2026-02-26 15:12:36] drwxrwx--x 2 boincer umatlas      4096 Feb 26 12:09 shared
[2026-02-26 15:12:36] -rw-r--r-- 2 boincer umatlas    597968 Feb 26 12:09 input.tar.gz
[2026-02-26 15:12:36] -rw-r--r-- 1 boincer umatlas         0 Feb 26 12:09 boinc_lockfile
[2026-02-26 15:12:36] -rw-r--r-- 1 boincer umatlas      2571 Feb 26 12:48 pandaJob.out
[2026-02-26 15:12:36] -rw------- 1 boincer umatlas        57 Feb 26 12:48 setup.sh.local
[2026-02-26 15:12:36] -rw------- 1 boincer umatlas    998467 Feb 26 12:49 agis_schedconf.cvmfs.json
[2026-02-26 15:12:36] -rw------- 1 boincer umatlas       431 Feb 26 12:49 workernode_map.json
[2026-02-26 15:12:36] -rw-r--r-- 1 boincer umatlas      5910 Feb 26 15:10 init_data.xml
[2026-02-26 15:12:36] -rw------- 1 boincer umatlas 213672061 Feb 26 15:11 HITS.48838447._001119.pool.root.1
[2026-02-26 15:12:36] -rw-r--r-- 1 boincer umatlas       531 Feb 26 15:11 boinc_task_state.xml
[2026-02-26 15:12:36] -rw------- 1 boincer umatlas      1049 Feb 26 15:11 memory_monitor_summary.json
[2026-02-26 15:12:36] -rw------- 1 boincer umatlas   1513015 Feb 26 15:12 agis_ddmendpoints.agis.ALL.json
[2026-02-26 15:12:36] -rw------- 1 boincer umatlas    388881 Feb 26 15:12 log.48838447._001119.job.log.tgz.1
[2026-02-26 15:12:36] -rw------- 1 boincer umatlas      6394 Feb 26 15:12 heartbeat.json
[2026-02-26 15:12:36] -rw-r--r-- 1 boincer umatlas        28 Feb 26 15:12 wrapper_checkpoint.txt
[2026-02-26 15:12:36] -rw-r--r-- 1 boincer umatlas      8192 Feb 26 15:12 boinc_mmap_file
[2026-02-26 15:12:36] -rw------- 1 boincer umatlas        96 Feb 26 15:12 pilot_heartbeat.json
[2026-02-26 15:12:36] -rw------- 1 boincer umatlas       815 Feb 26 15:12 pilotlog.txt
[2026-02-26 15:12:36] -rw------- 1 boincer umatlas   1204262 Feb 26 15:12 log.48838447._001119.job.log.1
[2026-02-26 15:12:36] -rw------- 1 boincer umatlas       357 Feb 26 15:12 output.list
[2026-02-26 15:12:36] -rw-r--r-- 1 boincer umatlas       620 Feb 26 15:12 runtime_log
[2026-02-26 15:12:36] -rw------- 1 boincer umatlas   1607680 Feb 26 15:12 result.tar.gz
[2026-02-26 15:12:36] -rw-r--r-- 1 boincer umatlas      9426 Feb 26 15:12 runtime_log.err
[2026-02-26 15:12:36] -rw------- 1 boincer umatlas       784 Feb 26 15:12 rKYNDmaTpF9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmRo2KDmOCdOom.diag
[2026-02-26 15:12:36] -rw-r--r-- 1 boincer umatlas     23147 Feb 26 15:12 stderr.txt
[2026-02-26 15:12:36] HITS file was successfully produced:
[2026-02-26 15:12:36] -rw------- 1 boincer umatlas 213672061 Feb 26 15:11 shared/HITS.pool.root.1
[2026-02-26 15:12:36]  *** Contents of shared directory: ***
[2026-02-26 15:12:36] total 485856
[2026-02-26 15:12:36] -rw-r--r-- 3 boincer umatlas 281614123 Feb 26 12:09 ATLAS.root_0
[2026-02-26 15:12:36] -rw-r--r-- 2 boincer umatlas     15845 Feb 26 12:09 start_atlas.sh
[2026-02-26 15:12:36] -rw-r--r-- 2 boincer umatlas    597968 Feb 26 12:09 input.tar.gz
[2026-02-26 15:12:36] -rw------- 1 boincer umatlas 213672061 Feb 26 15:11 HITS.pool.root.1
[2026-02-26 15:12:36] -rw------- 1 boincer umatlas   1607680 Feb 26 15:12 result.tar.gz
15:12:38 (9943): run_atlas exited; CPU time 62672.865329
15:12:38 (9943): called boinc_finish(0)

</stderr_txt>
]]>

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