Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
09:01:12 (419401): wrapper (7.7.26015): starting
09:01:12 (419401): wrapper: running run_atlas (--nthreads 3)
[2026-02-27 09:01:12] Arguments: --nthreads 3
[2026-02-27 09:01:12] Threads: 3
[2026-02-27 09:01:12] Checking for CVMFS
[2026-02-27 09:01:13] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-27 09:01:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-27 09:01:13] Running cvmfs_config stat atlas.cern.ch
[2026-02-27 09:01:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-27 09:01:13] 2.9.2.0 85582 2418 77036 156687 3 50 21952733 36864000 0 130560 0 887995 99.976 102105 17856 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-02-27 09:01:13] CVMFS is ok
[2026-02-27 09:01:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-27 09:01:13] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-27 09:01:13] Further information can be found at the LHC@home message board.
[2026-02-27 09:01:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-27 09:01:13] Checking for apptainer binary...
[2026-02-27 09:01:13] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-27 09:01:13] Running /usr/bin/apptainer --version
[2026-02-27 09:01:13] apptainer version 1.4.1-1.1
[2026-02-27 09:01:13] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-27 09:01:13] thA305
[2026-02-27 09:01:13] apptainer works
[2026-02-27 09:01:13] Set ATHENA_PROC_NUMBER=3
[2026-02-27 09:01:13] Set ATHENA_CORE_NUMBER=3
[2026-02-27 09:01:13] Starting ATLAS job with PandaID=7030649563
[2026-02-27 09:01:13] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-27 10:37:34]  *** The last 200 lines of the pilot log: ***
[2026-02-27 10:37:34] 2026-02-27 09:36:46,768 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-02-27 10:37:34] 2026-02-27 09:36:46,781 | INFO     | sufficient remaining disk space (237141753856 B)
[2026-02-27 10:37:34] 2026-02-27 09:36:46,782 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-27 10:37:34] 2026-02-27 09:36:46,782 | INFO     | current server update state: UPDATING_FINAL
[2026-02-27 10:37:34] 2026-02-27 09:36:46,782 | INFO     | update_server=False
[2026-02-27 10:37:34] 2026-02-27 09:36:46,782 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-27 10:37:34] 2026-02-27 09:36:46,782 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-27 10:37:34] 2026-02-27 09:36:46,782 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-27 10:37:34] 2026-02-27 09:36:47,074 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-02-27 10:37:34] 2026-02-27 09:36:47,074 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-02-27 10:37:34] 2026-02-27 09:36:47,074 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-27 10:37:34] 2026-02-27 09:36:47,074 | INFO     | will abort loop
[2026-02-27 10:37:34] 2026-02-27 09:36:47,123 | INFO     | all job control threads have been joined
[2026-02-27 10:37:34] 2026-02-27 09:36:47,245 | INFO     | all payload control threads have been joined
[2026-02-27 10:37:34] 2026-02-27 09:36:47,715 | INFO     | all data control threads have been joined
[2026-02-27 10:37:34] 2026-02-27 09:36:47,787 | INFO     | [job] retrieve thread has finished
[2026-02-27 10:37:34] 2026-02-27 09:36:47,788 | INFO     | [job] queue monitor thread has finished
[2026-02-27 10:37:34] 2026-02-27 09:36:47,799 | INFO     | [payload] validate_pre thread has finished
[2026-02-27 10:37:34] 2026-02-27 09:36:47,933 | INFO     | [data] copytool_in thread has finished
[2026-02-27 10:37:34] 2026-02-27 09:36:47,979 | INFO     | [payload] validate_post thread has finished
[2026-02-27 10:37:34] 2026-02-27 09:36:48,077 | INFO     | [job] job monitor thread has finished
[2026-02-27 10:37:34] 2026-02-27 09:36:48,129 | INFO     | [job] control thread has finished
[2026-02-27 10:37:34] 2026-02-27 09:36:48,251 | INFO     | [payload] control thread has finished
[2026-02-27 10:37:34] 2026-02-27 09:36:48,470 | INFO     | [payload] failed_post thread has finished
[2026-02-27 10:37:34] 2026-02-27 09:36:48,480 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-27 10:37:34] 2026-02-27 09:36:48,720 | INFO     | [data] control thread has finished
[2026-02-27 10:37:34] 2026-02-27 09:36:48,788 | INFO     | [data] copytool_out thread has finished
[2026-02-27 10:37:34] 2026-02-27 09:36:49,154 | INFO     | [payload] execute_payloads thread has finished
[2026-02-27 10:37:34] 2026-02-27 09:36:49,213 | INFO     | [job] create_data_payload thread has finished
[2026-02-27 10:37:34] 2026-02-27 09:36:49,213 | INFO     | [job] validate thread has finished
[2026-02-27 10:37:34] 2026-02-27 09:36:49,990 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-27 10:37:34] 2026-02-27 09:36:53,997 | INFO     | [data] queue_monitor thread has finished
[2026-02-27 10:37:34] 2026-02-27 09:37:17,369 | INFO     | PID=423447 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-02-27 10:37:34] 2026-02-27 09:37:17,370 | INFO     | found 0 job(s) in 20 queues
[2026-02-27 10:37:34] 2026-02-27 09:37:17,370 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-27 10:37:34] 2026-02-27 09:37:17,370 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-27 10:37:34] 2026-02-27 09:37:29,263 | INFO     | [monitor] cgroup control has ended
[2026-02-27 10:37:34] 2026-02-27 09:37:29,687 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139675088664384)>', '<ExcThread(monitor, started 139674450376448)>']
[2026-02-27 10:37:34] 2026-02-27 09:37:30,439 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-27 10:37:34] 2026-02-27 09:37:30,439 | INFO     | [monitor] control thread has ended
[2026-02-27 10:37:34] 2026-02-27 09:37:34,712 | INFO     | all workflow threads have been joined
[2026-02-27 10:37:34] 2026-02-27 09:37:34,713 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-27 10:37:34] 2026-02-27 09:37:34,713 | INFO     | traces error code: 0
[2026-02-27 10:37:34] 2026-02-27 09:37:34,713 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-27 10:37:34] 2026-02-27 09:37:34,763 [wrapper] ==== pilot stdout END ====
[2026-02-27 10:37:34] 2026-02-27 09:37:34,765 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-27 10:37:34] 2026-02-27 09:37:34,768 [wrapper] pilotpid: 423447
[2026-02-27 10:37:34] 2026-02-27 09:37:34,770 [wrapper] Pilot exit status: 0
[2026-02-27 10:37:34] 2026-02-27 09:37:34,777 [wrapper] pandaids: 7030649563
[2026-02-27 10:37:34] 2026-02-27 09:37:34,794 [wrapper] cleanup supervisor_pilot  433723 423448
[2026-02-27 10:37:34] 2026-02-27 09:37:34,796 [wrapper] Test setup, not cleaning
[2026-02-27 10:37:34] 2026-02-27 09:37:34,799 [wrapper] apfmon messages muted
[2026-02-27 10:37:34] 2026-02-27 09:37:34,801 [wrapper] ==== wrapper stdout END ====
[2026-02-27 10:37:34] 2026-02-27 09:37:34,803 [wrapper] ==== wrapper stderr END ====
[2026-02-27 10:37:34]  *** Error codes and diagnostics ***
[2026-02-27 10:37:34]     "exeErrorCode": 0,
[2026-02-27 10:37:34]     "exeErrorDiag": "",
[2026-02-27 10:37:34]     "pilotErrorCode": 0,
[2026-02-27 10:37:34]     "pilotErrorDiag": "",
[2026-02-27 10:37:34]  *** Listing of results directory ***
[2026-02-27 10:37:34] total 473556
[2026-02-27 10:37:34] -rw-r--r-- 1 boinc boinc    584627 Feb 26 10:18 pilot3.tar.gz
[2026-02-27 10:37:34] -rwx------ 1 boinc boinc     36322 Feb 26 10:19 runpilot2-wrapper.sh
[2026-02-27 10:37:34] -rw-r--r-- 1 boinc boinc      5111 Feb 26 10:20 queuedata.json
[2026-02-27 10:37:34] -rw-r--r-- 1 boinc boinc       100 Feb 27 09:01 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-27 10:37:34] -rwxr-xr-x 1 boinc boinc      7986 Feb 27 09:01 run_atlas
[2026-02-27 10:37:34] -rw-r--r-- 1 boinc boinc       105 Feb 27 09:01 job.xml
[2026-02-27 10:37:34] -rw-r--r-- 2 boinc boinc 273537710 Feb 27 09:01 EVNT.48343789._000041.pool.root.1
[2026-02-27 10:37:34] -rw-r--r-- 2 boinc boinc    597959 Feb 27 09:01 input.tar.gz
[2026-02-27 10:37:34] -rw-r--r-- 2 boinc boinc     15845 Feb 27 09:01 start_atlas.sh
[2026-02-27 10:37:34] drwxrwx--x 2 boinc boinc      4096 Feb 27 09:01 shared
[2026-02-27 10:37:34] -rw-r--r-- 1 boinc boinc         0 Feb 27 09:01 boinc_setup_complete
[2026-02-27 10:37:34] -rw-r--r-- 1 boinc boinc      6439 Feb 27 09:01 init_data.xml
[2026-02-27 10:37:34] -rw-r--r-- 1 boinc boinc         0 Feb 27 09:01 boinc_lockfile
[2026-02-27 10:37:34] -rw-r--r-- 1 boinc boinc      2567 Feb 27 09:01 pandaJob.out
[2026-02-27 10:37:34] -rw------- 1 boinc boinc    998489 Feb 27 09:01 agis_schedconf.cvmfs.json
[2026-02-27 10:37:34] -rw------- 1 boinc boinc   1513015 Feb 27 09:01 agis_ddmendpoints.agis.ALL.json
[2026-02-27 10:37:34] -rw------- 1 boinc boinc       418 Feb 27 09:01 workernode_map.json
[2026-02-27 10:37:34] drwx------ 5 boinc boinc      4096 Feb 27 09:01 pilot3
[2026-02-27 10:37:34] -rw-r--r-- 1 boinc boinc       529 Feb 27 10:36 boinc_task_state.xml
[2026-02-27 10:37:34] -rw------- 1 boinc boinc 205296298 Feb 27 10:36 HITS.48838615._001007.pool.root.1
[2026-02-27 10:37:34] -rw------- 1 boinc boinc      1021 Feb 27 10:36 memory_monitor_summary.json
[2026-02-27 10:37:34] -rw------- 1 boinc boinc    255935 Feb 27 10:36 log.48838615._001007.job.log.tgz.1
[2026-02-27 10:37:34] -rw------- 1 boinc boinc      6312 Feb 27 10:36 heartbeat.json
[2026-02-27 10:37:34] -rw------- 1 boinc boinc        95 Feb 27 10:37 pilot_heartbeat.json
[2026-02-27 10:37:34] -rw-r--r-- 1 boinc boinc      8192 Feb 27 10:37 boinc_mmap_file
[2026-02-27 10:37:34] -rw-r--r-- 1 boinc boinc        27 Feb 27 10:37 wrapper_checkpoint.txt
[2026-02-27 10:37:34] -rw------- 1 boinc boinc      4933 Feb 27 10:37 pilotlog.txt
[2026-02-27 10:37:34] -rw------- 1 boinc boinc    830324 Feb 27 10:37 log.48838615._001007.job.log.1
[2026-02-27 10:37:34] -rw------- 1 boinc boinc       357 Feb 27 10:37 output.list
[2026-02-27 10:37:34] -rw-r--r-- 1 boinc boinc       620 Feb 27 10:37 runtime_log
[2026-02-27 10:37:34] -rw------- 1 boinc boinc   1105920 Feb 27 10:37 result.tar.gz
[2026-02-27 10:37:34] -rw-r--r-- 1 boinc boinc      8896 Feb 27 10:37 runtime_log.err
[2026-02-27 10:37:34] -rw------- 1 boinc boinc       657 Feb 27 10:37 go0MDmyhmF9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmOb2KDmbbD46m.diag
[2026-02-27 10:37:34] -rw-r--r-- 1 boinc boinc      8087 Feb 27 10:37 stderr.txt
[2026-02-27 10:37:34] HITS file was successfully produced:
[2026-02-27 10:37:34] -rw------- 1 boinc boinc 205296298 Feb 27 10:36 shared/HITS.pool.root.1
[2026-02-27 10:37:34]  *** Contents of shared directory: ***
[2026-02-27 10:37:34] total 469304
[2026-02-27 10:37:34] -rw-r--r-- 2 boinc boinc 273537710 Feb 27 09:01 ATLAS.root_0
[2026-02-27 10:37:34] -rw-r--r-- 2 boinc boinc    597959 Feb 27 09:01 input.tar.gz
[2026-02-27 10:37:34] -rw-r--r-- 2 boinc boinc     15845 Feb 27 09:01 start_atlas.sh
[2026-02-27 10:37:34] -rw------- 1 boinc boinc 205296298 Feb 27 10:36 HITS.pool.root.1
[2026-02-27 10:37:34] -rw------- 1 boinc boinc   1105920 Feb 27 10:37 result.tar.gz
10:37:36 (419401): run_atlas exited; CPU time 16439.576752
10:37:36 (419401): called boinc_finish(0)

</stderr_txt>
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